17-02-28 20:52:24.114 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6===================
17-02-28 20:52:24.115 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle===================
17-02-28 20:52:24.115 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:24.116 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:24.116 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:24.116 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:24.126 -08 000000124 INF: FPGA: Recv T2RD 21230
17-02-28 20:52:24.126 -08 000000124 INF: FPGA: Recv T1RD 19687
17-02-28 20:52:24.126 -08 000000124 INF: FPGA: Recv T3RD 21020
17-02-28 20:52:24.126 -08 000000097 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:52:24.126 -08 000000111 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6
17-02-28 20:52:24.126 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:52:24.126 -08 000000097 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:24.127 -08 000000111 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:24.129 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:24.144 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:52:24.191 -08 000000056 INF: FPGA: Recv T2RD 21230
17-02-28 20:52:24.191 -08 000000056 INF: FPGA: Recv T3RD 21020
17-02-28 20:52:24.191 -08 000000056 INF: FPGA: Recv T1RD 19687
17-02-28 20:52:24.191 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:52:24.191 -08 000000111 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6
17-02-28 20:52:24.191 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:24.191 -08 000000111 INF: Tilt Motor 3: After move to 5.3404, error = -0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:24.191 -08 000000111 INF: Tilt Motor 3: Moved to 5.3391 after 372.1693 ms
17-02-28 20:52:24.192 -08 000000097 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:52:24.192 -08 000000111 INF: ======================================
17-02-28 20:52:24.193 -08 000000097 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:24.194 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:24.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (8)===================
17-02-28 20:52:24.194 -08 000000018 INF: Valve A1: Go to position 8
17-02-28 20:52:24.194 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:52:24.253 -08 000000092 INF: FPGA: Recv T1RD 19687
17-02-28 20:52:24.253 -08 000000092 INF: FPGA: Recv T2RD 21230
17-02-28 20:52:24.253 -08 000000097 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:52:24.253 -08 000000097 INF: Tilt Motor 2: After move to 5.3939, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:24.253 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:52:24.253 -08 000000097 INF: Tilt Motor 2: Moved to 5.3924 after 434.1444 ms
17-02-28 20:52:24.253 -08 000000084 INF: Tilt Motor 1: After move to 4.9990, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:24.254 -08 000000084 INF: Tilt Motor 1: Moved to 5.0005 after 434.0668 ms
17-02-28 20:52:24.254 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 3\r
17-02-28 20:52:24.254 -08 000000018 INF: Valve A1: 483.486 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:52:24.254 -08 000000097 INF: ======================================
17-02-28 20:52:24.254 -08 000000018 INF: Valve A1: Taking longest path 'CC' from 3 to 8 to avoid 7
17-02-28 20:52:24.254 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC8\r
17-02-28 20:52:24.254 -08 000000084 INF: ======================================
17-02-28 20:52:24.254 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:52:24.254 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:52:24.255 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Aligning===================
17-02-28 20:52:24.255 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Aligning===================
17-02-28 20:52:24.256 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface===================
17-02-28 20:52:24.256 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface===================
17-02-28 20:52:24.272 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.273 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.273 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:52:24.273 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:52:24.317 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:52:24.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.317 -08 000000042 INF: TopSurfaceZPositions[] was -0.150543447086086, so used the TopSurfaceZPositions[] (-0.150543447086086) + compensator value (0.0227).
17-02-28 20:52:24.320 -08 000000042 INF: LFT enabled: Best z-height for LaneTopSurface and Illumina.Instrument.Logic.Sentrix.II.SentrixSection was found to be -0.127843447086086
17-02-28 20:52:24.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.322 -08 000000107 INF: ===================Move Tilt Motor 1===================
17-02-28 20:52:24.322 -08 000000119 INF: ===================Move Tilt Motor 3===================
17-02-28 20:52:24.323 -08 000000107 INF: Tilt Motor 1: Moving to 5.0768 mm, started at 5.0005 mm, delta = 0.0763 mm
17-02-28 20:52:24.323 -08 000000107 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:24.323 -08 000000119 INF: Tilt Motor 3: Moving to 5.2105 mm, started at 5.3391 mm, delta = -0.1286 mm
17-02-28 20:52:24.323 -08 000000096 INF: ===================Move Tilt Motor 2===================
17-02-28 20:52:24.323 -08 000000096 INF: Tilt Motor 2: Moving to 5.2636 mm, started at 5.3924 mm, delta = -0.1288 mm
17-02-28 20:52:24.324 -08 000000096 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:24.325 -08 000000119 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:24.417 -08 000000009 INF: FPGA: Recv T1RD 19687
17-02-28 20:52:24.417 -08 000000009 INF: FPGA: Recv T2RD 21230
17-02-28 20:52:24.417 -08 000000009 INF: FPGA: Recv T3RD 21020
17-02-28 20:52:24.417 -08 000000119 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6
17-02-28 20:52:24.417 -08 000000119 INF: Tilt Motor 3: Moving to 20514 encoder counts
17-02-28 20:52:24.417 -08 000000096 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:52:24.417 -08 000000096 INF: Tilt Motor 2: Moving to 20723 encoder counts
17-02-28 20:52:24.417 -08 000000107 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:52:24.417 -08 000000107 INF: Tilt Motor 1: Moving to 19987 encoder counts
17-02-28 20:52:24.417 -08 000000119 INF: FPGA: Xmit T3MOVETO 20514\n
17-02-28 20:52:24.420 -08 000000096 INF: FPGA: Xmit T2MOVETO 20723\n
17-02-28 20:52:24.428 -08 000000107 INF: FPGA: Xmit T1MOVETO 19987\n
17-02-28 20:52:24.594 -08 000000111 INF: FPGA: Recv T1MOVETO 50
17-02-28 20:52:24.594 -08 000000107 INF: Tilt Motor 1: To move from 5.000 to 5.077 (0.076 mm) should take 50 steps, but required 50 steps (0.076 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:52:24.594 -08 000000107 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:24.659 -08 000000064 INF: FPGA: Recv T1RD 19985
17-02-28 20:52:24.659 -08 000000064 INF: FPGA: Recv T3MOVETO 84
17-02-28 20:52:24.659 -08 000000064 INF: FPGA: Recv T2MOVETO 84
17-02-28 20:52:24.659 -08 000000096 INF: Tilt Motor 2: To move from 5.392 to 5.264 (-0.129 mm) should take 84 steps, but required 84 steps (0.128 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:52:24.659 -08 000000119 INF: Tilt Motor 3: To move from 5.339 to 5.210 (-0.129 mm) should take 84 steps, but required 84 steps (0.128 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:52:24.659 -08 000000096 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:24.660 -08 000000107 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6
17-02-28 20:52:24.662 -08 000000119 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:24.663 -08 000000107 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:24.724 -08 000000088 INF: FPGA: Recv T2RD 20726
17-02-28 20:52:24.724 -08 000000088 INF: FPGA: Recv T3RD 20517
17-02-28 20:52:24.724 -08 000000088 INF: FPGA: Recv T1RD 19985
17-02-28 20:52:24.724 -08 000000107 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6
17-02-28 20:52:24.724 -08 000000107 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:24.724 -08 000000096 INF: Tilt Motor 2: Encoder: at motor step 3454 + 2/6
17-02-28 20:52:24.724 -08 000000119 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:52:24.725 -08 000000119 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:24.727 -08 000000096 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:24.783 -08 000000084 INF: FPGA: Recv T1RD 19985
17-02-28 20:52:24.783 -08 000000084 INF: FPGA: Recv T3RD 20517
17-02-28 20:52:24.783 -08 000000084 INF: FPGA: Recv T2RD 20726
17-02-28 20:52:24.783 -08 000000119 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:52:24.783 -08 000000096 INF: Tilt Motor 2: Encoder: at motor step 3454 + 2/6
17-02-28 20:52:24.783 -08 000000119 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:24.783 -08 000000107 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6
17-02-28 20:52:24.783 -08 000000107 INF: Tilt Motor 1: After move to 5.0768, error = -0.0006, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:24.783 -08 000000107 INF: Tilt Motor 1: Moved to 5.0762 after 460.8913 ms
17-02-28 20:52:24.784 -08 000000107 INF: ======================================
17-02-28 20:52:24.784 -08 000000096 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:24.845 -08 000000055 INF: FPGA: Recv T3RD 20517
17-02-28 20:52:24.845 -08 000000055 INF: FPGA: Recv T2RD 20726
17-02-28 20:52:24.845 -08 000000119 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:52:24.845 -08 000000119 INF: Tilt Motor 3: After move to 5.2105, error = 0.0008, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:24.845 -08 000000096 INF: Tilt Motor 2: Encoder: at motor step 3454 + 2/6
17-02-28 20:52:24.845 -08 000000096 INF: Tilt Motor 2: After move to 5.2636, error = 0.0008, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:24.845 -08 000000119 INF: Tilt Motor 3: Moved to 5.2113 after 522.4976 ms
17-02-28 20:52:24.845 -08 000000096 INF: Tilt Motor 2: Moved to 5.2644 after 521.7677 ms
17-02-28 20:52:24.846 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:52:24.846 -08 000000096 INF: ======================================
17-02-28 20:52:24.846 -08 000000119 INF: ======================================
17-02-28 20:52:24.846 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:24.846 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:52:24.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.848 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.848 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.07675395464298, m2=5.2635772251359, m3=5.2104912251359
17-02-28 20:52:24.849 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.850 -08 000000042 INF: Compensator: Remaining IntoPath
17-02-28 20:52:24.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.851 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:24.857 -08 000000042 INF: Swath 1 position calculated to be: {X=68.63164, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:52:24.857 -08 000000042 INF: Swath 2 position calculated to be: {X=69.73964, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:52:24.862 -08 000000042 INF: Swath 0: Converted transform from (-99.39377, 14.12223) pixels to (-0.034155, 0.00483) mm.
17-02-28 20:52:24.868 -08 000000042 INF: Swath 1: Converted transform from (-119.804, 14.09405) pixels to (-0.0414, 0.00483) mm.
17-02-28 20:52:24.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:52:24.869 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:52:24.869 -08 000000042 INF: Transformed XStagePosition from 68.63164 mm to 68.597482573241 mm.
17-02-28 20:52:24.881 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5579193554595 mm.
17-02-28 20:52:24.881 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3579193554595 mm.
17-02-28 20:52:24.881 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4486693554595 mm.
17-02-28 20:52:24.883 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:24.883 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:52:24.883 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:24.883 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -77.7 um, section = A_1
17-02-28 20:52:24.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:24.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:24.889 -08 000000072 INF: ===================Move X,Y===================
17-02-28 20:52:24.889 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:24.889 -08 000000029 INF: ===================MoveEmissionFilters===================
17-02-28 20:52:24.889 -08 000000072 INF: ===================Move X,Y, Parallel===================
17-02-28 20:52:24.889 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:52:24.890 -08 000000080 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:52:24.890 -08 000000080 INF: Z Motor: Moving to -0.1478 mm, started at -0.0777 mm
17-02-28 20:52:24.890 -08 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:52:24.890 -08 000000080 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:52:24.890 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:52:24.890 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:52:24.890 -08 000000077 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:52:24.890 -08 000000107 INF: ===================Move X Motor without settling===================
17-02-28 20:52:24.890 -08 000000129 INF: ===================Move Y Motor without settling===================
17-02-28 20:52:24.890 -08 000000129 INF: Y Motor: Moving to 64.5579 mm @25.000 mm/sec, started at 14.8521 mm
17-02-28 20:52:24.890 -08 000000129 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:52:24.890 -08 000000129 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:24.890 -08 000000107 INF: X Motor: Xmit PR VM\n
17-02-28 20:52:24.891 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:52:24.891 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:52:24.891 -08 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:52:24.891 -08 000000077 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:52:24.891 -08 000000124 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:52:24.891 -08 000000087 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:52:24.891 -08 000000036 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:52:24.892 -08 000000061 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:52:24.892 -08 000000123 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:52:24.892 -08 000000063 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:52:24.892 -08 000000092 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:52:24.892 -08 000000032 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:52:24.892 -08 000000063 INF: ======================================
17-02-28 20:52:24.892 -08 000000087 INF: ======================================
17-02-28 20:52:24.892 -08 000000061 INF: ======================================
17-02-28 20:52:24.892 -08 000000032 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:52:24.893 -08 000000124 INF: ======================================
17-02-28 20:52:24.893 -08 000000032 INF: ======================================
17-02-28 20:52:24.893 -08 000000092 INF: ======================================
17-02-28 20:52:24.894 -08 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:52:24.894 -08 000000077 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:52:24.894 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:52:24.895 -08 000000036 INF: ======================================
17-02-28 20:52:24.895 -08 000000084 INF: ======================================
17-02-28 20:52:24.895 -08 000000077 INF: ======================================
17-02-28 20:52:24.895 -08 000000123 INF: ======================================
17-02-28 20:52:24.895 -08 000000109 INF: ======================================
17-02-28 20:52:24.896 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:52:24.897 -08 000000095 INF: ======================================
17-02-28 20:52:24.898 -08 000000029 INF: ======================================
17-02-28 20:52:24.907 -08 000000097 INF: FPGA: Recv ZTRG 
17-02-28 20:52:24.907 -08 000000080 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:52:24.969 -08 000000123 INF: FPGA: Recv ZYT 
17-02-28 20:52:24.969 -08 000000080 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:52:24.969 -08 000000080 INF: FPGA: Xmit ZMV 38756\n
17-02-28 20:52:24.971 -08 000000107 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:52:24.971 -08 000000107 INF: X Motor: Xmit PR VI\n
17-02-28 20:52:24.971 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:24.971 -08 000000129 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:52:24.971 -08 000000129 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:25.031 -08 000000056 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:52:25.031 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:52:25.033 -08 000000107 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:52:25.033 -08 000000107 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:52:25.033 -08 000000107 INF: X Motor: Moving to 68.5975 mm @15.000 mm/sec, started at 26.0703 mm
17-02-28 20:52:25.033 -08 000000107 INF: X Motor: Xmit MA 3931\n
17-02-28 20:52:25.034 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:25.034 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:25.098 -08 000000107 INF: X Motor: Recv MA 3931\r\n>
17-02-28 20:52:25.098 -08 000000129 INF: Y Motor: Recv v 0\r
17-02-28 20:52:25.098 -08 000000129 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:25.098 -08 000000107 INF: X Motor: WaitUntilStopped 62835
17-02-28 20:52:25.098 -08 000000129 INF: Y Motor: Set target position to 5955792 encoder counts
17-02-28 20:52:25.098 -08 000000129 INF: Y Motor: Xmit s r0xca 5955792\r
17-02-28 20:52:25.099 -08 000000029 INF: FPGA: Recv ZMV 
17-02-28 20:52:25.099 -08 000000080 INF: Z Motor: MoveAndTrigger 'ZMV' command took 130.5312 ms
17-02-28 20:52:25.100 -08 000000080 INF: FPGA: Xmit ZDACR\n
17-02-28 20:52:25.158 -08 000000056 INF: FPGA: Recv ZDACR 38756
17-02-28 20:52:25.158 -08 000000080 INF: Z Motor: MoveAndTrigger took 268.5193 ms w/comms
17-02-28 20:52:25.158 -08 000000080 INF: Z Motor: After move to -0.1478, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:25.158 -08 000000080 INF: Z Motor: MoveAbsStepped took 268.7021 ms
17-02-28 20:52:25.159 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:25.160 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:25.160 -08 000000129 INF: Y Motor: Start the move command
17-02-28 20:52:25.160 -08 000000129 INF: Y Motor: Xmit t 1\r
17-02-28 20:52:25.160 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:52:25.161 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:52:25.161 -08 000000009 INF: ===================Camera Arm TDI===================
17-02-28 20:52:25.161 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:25.162 -08 000000009 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:25.162 -08 000000077 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:52:25.163 -08 000000077 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:25.163 -08 000000009 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:52:25.163 -08 000000077 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:52:25.222 -08 000000097 INF: FPGA: Recv ZSEL 
17-02-28 20:52:25.224 -08 000000077 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:25.224 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:25.224 -08 000000077 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:52:25.224 -08 000000129 INF: Y Motor: WaitUntilStopped 61988
17-02-28 20:52:25.224 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:25.282 -08 000000119 INF: FPGA: Recv TDIBB
17-02-28 20:52:25.283 -08 000000077 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:25.284 -08 000000077 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:52:25.284 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:25.286 -08 000000077 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:52:25.286 -08 000000077 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:52:25.286 -08 000000077 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:52:25.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:25.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:25.343 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:25.344 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:52:25.345 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:25.346 -08 000000129 INF: Y Motor: Unshifted Position: 1067135
17-02-28 20:52:25.347 -08 000000077 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:52:25.348 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:25.350 -08 000000077 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:52:25.351 -08 000000077 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:52:25.351 -08 000000077 INF: Z Motor: Arming to move to -0.1078 mm
17-02-28 20:52:25.351 -08 000000077 INF: FPGA: Xmit ZYT 6435792 4\n
17-02-28 20:52:25.396 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:25.406 -08 000000097 INF: FPGA: Recv ZYT 
17-02-28 20:52:25.406 -08 000000077 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1567135 enc / 15.671 mm / ) = 6435792 enc / 64.358 mm
17-02-28 20:52:25.406 -08 000000077 INF: FPGA: Xmit ZARM 28270\n
17-02-28 20:52:25.408 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:25.422 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:52:25.470 -08 000000032 INF: FPGA: Recv ZARM
17-02-28 20:52:25.470 -08 000000077 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.7075 ms
17-02-28 20:52:25.470 -08 000000077 INF: Z Motor: ArmAbsStepped took 119.0681 ms
17-02-28 20:52:25.470 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:25.472 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:52:25.473 -08 000000077 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:52:25.473 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:52:25.475 -08 000000077 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:52:25.475 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:52:25.477 -08 000000077 INF: ======================================
17-02-28 20:52:25.508 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:52:25.521 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:25.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:52:25.594 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:52:25.657 -08 000000129 INF: Y Motor: Unshifted Position: 1769376
17-02-28 20:52:25.694 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:52:25.707 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:25.783 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:25.784 -08 000000009 INF: Camera #0 AttachBuffer (imageDataPtr = 56923197488 imgPtr = 56923197488 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:52:25.784 -08 000000009 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:52:25.784 -08 000000009 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:52:25.799 -08 000000009 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:25.801 -08 000000009 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:52:25.834 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:25.883 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:25.969 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:25.970 -08 000000129 INF: Y Motor: Unshifted Position: 2571052
17-02-28 20:52:26.020 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:26.149 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:26.219 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:26.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:26.282 -08 000000129 INF: Y Motor: Unshifted Position: 3332690
17-02-28 20:52:26.332 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:26.381 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:52:26.435 -08 000000009 INF: Camera #2 AttachBuffer (imageDataPtr = 58735136816 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:52:26.435 -08 000000009 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:52:26.435 -08 000000009 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:52:26.451 -08 000000009 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:26.454 -08 000000009 INF: ===================Camera Arm TDI===================
17-02-28 20:52:26.455 -08 000000009 INF: ======================================
17-02-28 20:52:26.456 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:26.457 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:26.457 -08 000000080 INF: ======================================
17-02-28 20:52:26.468 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:26.568 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:26.595 -08 000000129 INF: Y Motor: Unshifted Position: 4113599
17-02-28 20:52:26.645 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:26.656 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:26.656 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:52:26.756 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP18240R\r
17-02-28 20:52:26.772 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:26.846 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:26.906 -08 000000129 INF: Y Motor: Unshifted Position: 4896848
17-02-28 20:52:26.946 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:26.956 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:27.031 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:27.082 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:27.221 -08 000000129 INF: Y Motor: Unshifted Position: 5671082
17-02-28 20:52:27.271 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:27.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:27.343 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:27.400 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:27.530 -08 000000129 INF: Y Motor: Unshifted Position: 5955794
17-02-28 20:52:27.530 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:52:27.530 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:27.592 -08 000000129 INF: Y Motor: Recv v 0\r
17-02-28 20:52:27.592 -08 000000129 INF: Y Motor: Moved to 64.5579 after 2367 ms
17-02-28 20:52:27.592 -08 000000129 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:52:27.593 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:27.656 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:27.657 -08 000000129 INF: Y Motor: Recv v 4096\r
17-02-28 20:52:27.657 -08 000000129 INF: Y Motor: Status After move finished OK:
17-02-28 20:52:27.657 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:27.736 -08 000000129 INF: Y Motor: Recv v 0\r
17-02-28 20:52:27.736 -08 000000129 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:27.736 -08 000000129 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:52:27.797 -08 000000129 INF: Y Motor: Recv v 402653184\r
17-02-28 20:52:27.797 -08 000000129 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:52:27.797 -08 000000129 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:52:27.797 -08 000000129 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:52:27.859 -08 000000129 INF: Y Motor: Recv v 0\r
17-02-28 20:52:27.859 -08 000000129 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:52:27.859 -08 000000129 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:52:27.859 -08 000000129 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:27.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:27.921 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:27.921 -08 000000129 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:52:27.921 -08 000000129 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:27.937 -08 000000029 INF: RunCopyService queue size at 2/28/2017 8:52:27 PM is 1
17-02-28 20:52:27.981 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:27.982 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:27.982 -08 000000129 INF: ======================================
17-02-28 20:52:28.231 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:28.294 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:28.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:28.545 -08 000000107 INF: X Motor: Xmit PR ER\n
17-02-28 20:52:28.606 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:28.607 -08 000000107 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:52:28.607 -08 000000107 INF: X Motor: Moved to 68.5972 after 3508 ms
17-02-28 20:52:28.607 -08 000000107 INF: ======================================
17-02-28 20:52:28.609 -08 000000072 INF: ===================Move X,Y===================
17-02-28 20:52:28.610 -08 000000072 INF: ======================================
17-02-28 20:52:28.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:28.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:28.612 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:52:28.612 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:52:28.671 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:52:28.671 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:52:28.731 -08 000000107 INF: FPGA: Recv ZFREQCL
17-02-28 20:52:28.731 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:52:28.732 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:28.732 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:52:28.793 -08 000000124 INF: FPGA: Recv TDIYERD 6455793
17-02-28 20:52:28.793 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455793 counts (64.558 mm)
17-02-28 20:52:28.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:28.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:28.795 -08 000000031 INF: ===================Set YMotor gains for scans===================
17-02-28 20:52:28.795 -08 000000009 INF: ===================TDI FPGA Arm===================
17-02-28 20:52:28.795 -08 000000031 INF: ======================================
17-02-28 20:52:28.796 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:28.797 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:52:28.797 -08 000000009 INF: FPGA: Xmit TDIYPOS 6344867\n
17-02-28 20:52:28.854 -08 000000063 INF: FPGA: Recv TDIYPOS
17-02-28 20:52:28.854 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:28.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:28.856 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:52:28.856 -08 000000009 INF: FPGA: Xmit TDIYARM3 139264 6435792 1 1\n
17-02-28 20:52:28.916 -08 000000064 INF: FPGA: Recv TDIYARM3
17-02-28 20:52:28.916 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:28.917 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:28.918 -08 000000009 INF: ===================TDI FPGA Arm===================
17-02-28 20:52:28.919 -08 000000009 INF: ======================================
17-02-28 20:52:28.920 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:28.920 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:28.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:28.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:28.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:28.922 -08 000000084 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:52:28.923 -08 000000051 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:52:28.923 -08 000000084 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:52:28.923 -08 000000084 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:52:28.923 -08 000000084 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:52:28.923 -08 000000051 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:52:28.923 -08 000000051 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:52:28.923 -08 000000051 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:52:28.923 -08 000000084 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:52:28.927 -08 000000051 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:52:29.167 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:29.231 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:29.292 -08 000000119 INF: FPGA: Recv EX1MV
17-02-28 20:52:29.292 -08 000000119 INF: FPGA: Recv EX2MV
17-02-28 20:52:29.292 -08 000000051 INF: Excitation Filter 2: Moved -107 steps in 369.1573 ms
17-02-28 20:52:29.292 -08 000000084 INF: Excitation Filter 1: Moved -107 steps in 369.3473 ms
17-02-28 20:52:29.292 -08 000000084 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.5109 ms
17-02-28 20:52:29.292 -08 000000084 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.5887 ms
17-02-28 20:52:29.292 -08 000000051 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.3017 ms
17-02-28 20:52:29.292 -08 000000051 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.6925 ms
17-02-28 20:52:29.293 -08 000000084 INF: ======================================
17-02-28 20:52:29.293 -08 000000051 INF: ======================================
17-02-28 20:52:29.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:29.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:29.296 -08 000000104 INF: ===================Camera TDI===================
17-02-28 20:52:29.296 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:52:29.296 -08 000000029 INF: ===================FPGA Z Wait===================
17-02-28 20:52:29.296 -08 000000087 INF: ===================Move Y Motor without settling===================
17-02-28 20:52:29.297 -08 000000087 INF: Y Motor: Moving to 14.9096 mm @6.500 mm/sec, started at 64.5579 mm
17-02-28 20:52:29.297 -08 000000087 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:52:29.297 -08 000000087 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:29.297 -08 000000104 INF: ===================Camera TDI, Parallel===================
17-02-28 20:52:29.297 -08 000000032 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:52:29.297 -08 000000032 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:52:29.298 -08 000000029 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:52:29.298 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:52:29.298 -08 000000111 INF: ===================Camera TDI===================
17-02-28 20:52:29.299 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:29.300 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:29.300 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:29.300 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:29.361 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:52:29.361 -08 000000087 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:52:29.361 -08 000000087 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:29.419 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:52:29.419 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:29.450 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:29.450 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:29.450 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:29.450 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:29.480 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:52:29.480 -08 000000087 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:29.480 -08 000000087 INF: Y Motor: Set target position to 990958 encoder counts
17-02-28 20:52:29.480 -08 000000087 INF: Y Motor: Xmit s r0xca 990958\r
17-02-28 20:52:29.481 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:29.542 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:52:29.542 -08 000000087 INF: Y Motor: Start the move command
17-02-28 20:52:29.542 -08 000000087 INF: Y Motor: Xmit t 1\r
17-02-28 20:52:29.543 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:29.600 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:29.600 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:29.600 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:29.600 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:29.607 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:52:29.607 -08 000000087 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:52:29.607 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:29.667 -08 000000055 INF: FPGA: Recv ZWAIT 
17-02-28 20:52:29.667 -08 000000029 INF: ======================================
17-02-28 20:52:29.731 -08 000000087 INF: Y Motor: Unshifted Position: 5891983
17-02-28 20:52:29.750 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:52:29.750 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:52:29.750 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:52:29.750 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:52:29.750 -08 000000036 INF: ===================Camera #0 Frame #5===================
17-02-28 20:52:29.750 -08 000000111 INF: ===================Camera #2 Frame #5===================
17-02-28 20:52:29.781 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:29.793 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:29.853 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:29.904 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:29.915 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:52:29.915 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:52:29.915 -08 000000036 INF: ===================Camera #0 Frame #11===================
17-02-28 20:52:29.916 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:52:29.916 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:52:29.916 -08 000000111 INF: ===================Camera #2 Frame #11===================
17-02-28 20:52:30.043 -08 000000087 INF: Y Motor: Unshifted Position: 5688973
17-02-28 20:52:30.083 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:52:30.083 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:52:30.083 -08 000000036 INF: ===================Camera #0 Frame #17===================
17-02-28 20:52:30.085 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:52:30.085 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:52:30.085 -08 000000111 INF: ===================Camera #2 Frame #17===================
17-02-28 20:52:30.093 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:30.103 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:30.166 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:30.216 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:30.251 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:52:30.251 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:52:30.251 -08 000000036 INF: ===================Camera #0 Frame #23===================
17-02-28 20:52:30.254 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:52:30.254 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:52:30.254 -08 000000111 INF: ===================Camera #2 Frame #23===================
17-02-28 20:52:30.353 -08 000000087 INF: Y Motor: Unshifted Position: 5487479
17-02-28 20:52:30.403 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:30.416 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:30.419 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:52:30.419 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:52:30.419 -08 000000036 INF: ===================Camera #0 Frame #29===================
17-02-28 20:52:30.423 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:52:30.423 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:52:30.423 -08 000000111 INF: ===================Camera #2 Frame #29===================
17-02-28 20:52:30.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:30.530 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:30.587 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:52:30.587 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:52:30.587 -08 000000036 INF: ===================Camera #0 Frame #35===================
17-02-28 20:52:30.592 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:52:30.592 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:52:30.592 -08 000000111 INF: ===================Camera #2 Frame #36===================
17-02-28 20:52:30.667 -08 000000087 INF: Y Motor: Unshifted Position: 5283160
17-02-28 20:52:30.717 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:30.729 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:30.755 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:52:30.755 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:52:30.755 -08 000000036 INF: ===================Camera #0 Frame #42===================
17-02-28 20:52:30.764 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:52:30.764 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:52:30.764 -08 000000111 INF: ===================Camera #2 Frame #42===================
17-02-28 20:52:30.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:30.842 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:30.926 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:52:30.926 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:52:30.926 -08 000000036 INF: ===================Camera #0 Frame #48===================
17-02-28 20:52:30.933 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:52:30.933 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:52:30.933 -08 000000111 INF: ===================Camera #2 Frame #48===================
17-02-28 20:52:30.979 -08 000000087 INF: Y Motor: Unshifted Position: 5080356
17-02-28 20:52:31.029 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:31.041 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:31.094 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:52:31.094 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:52:31.094 -08 000000036 INF: ===================Camera #0 Frame #54===================
17-02-28 20:52:31.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:31.102 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:52:31.102 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:52:31.102 -08 000000111 INF: ===================Camera #2 Frame #54===================
17-02-28 20:52:31.153 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:31.262 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:52:31.262 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:52:31.262 -08 000000036 INF: ===================Camera #0 Frame #60===================
17-02-28 20:52:31.271 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:52:31.271 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:52:31.271 -08 000000111 INF: ===================Camera #2 Frame #61===================
17-02-28 20:52:31.289 -08 000000087 INF: Y Motor: Unshifted Position: 4876689
17-02-28 20:52:31.339 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:31.351 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:31.413 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:31.430 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:52:31.430 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:52:31.430 -08 000000036 INF: ===================Camera #0 Frame #66===================
17-02-28 20:52:31.443 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:52:31.443 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:52:31.443 -08 000000111 INF: ===================Camera #2 Frame #67===================
17-02-28 20:52:31.464 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:31.600 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:52:31.600 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:52:31.600 -08 000000036 INF: ===================Camera #0 Frame #73===================
17-02-28 20:52:31.601 -08 000000087 INF: Y Motor: Unshifted Position: 4674539
17-02-28 20:52:31.613 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:52:31.613 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:52:31.613 -08 000000111 INF: ===================Camera #2 Frame #73===================
17-02-28 20:52:31.651 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:31.663 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:31.727 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:31.772 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:52:31.772 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:52:31.772 -08 000000036 INF: ===================Camera #0 Frame #79===================
17-02-28 20:52:31.778 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:31.784 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:52:31.784 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:52:31.784 -08 000000111 INF: ===================Camera #2 Frame #80===================
17-02-28 20:52:31.913 -08 000000087 INF: Y Motor: Unshifted Position: 4472166
17-02-28 20:52:31.941 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:52:31.941 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:52:31.941 -08 000000036 INF: ===================Camera #0 Frame #85===================
17-02-28 20:52:31.958 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:52:31.958 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:52:31.958 -08 000000111 INF: ===================Camera #2 Frame #86===================
17-02-28 20:52:31.963 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:31.977 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:32.037 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:32.088 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:32.111 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:52:32.111 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:52:32.111 -08 000000036 INF: ===================Camera #0 Frame #92===================
17-02-28 20:52:32.129 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:52:32.129 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:52:32.129 -08 000000111 INF: ===================Camera #2 Frame #92===================
17-02-28 20:52:32.227 -08 000000087 INF: Y Motor: Unshifted Position: 4268715
17-02-28 20:52:32.277 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:32.284 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:52:32.284 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:52:32.284 -08 000000036 INF: ===================Camera #0 Frame #98===================
17-02-28 20:52:32.287 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:32.300 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:52:32.300 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:52:32.300 -08 000000111 INF: ===================Camera #2 Frame #99===================
17-02-28 20:52:32.351 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:32.401 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:32.454 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:52:32.454 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:52:32.454 -08 000000036 INF: ===================Camera #0 Frame #104===================
17-02-28 20:52:32.474 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:52:32.474 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:52:32.474 -08 000000111 INF: ===================Camera #2 Frame #105===================
17-02-28 20:52:32.537 -08 000000087 INF: Y Motor: Unshifted Position: 4065039
17-02-28 20:52:32.587 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:32.601 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:32.624 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:52:32.624 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:52:32.624 -08 000000036 INF: ===================Camera #0 Frame #110===================
17-02-28 20:52:32.645 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:52:32.645 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:52:32.645 -08 000000111 INF: ===================Camera #2 Frame #111===================
17-02-28 20:52:32.661 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:32.712 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:32.793 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:52:32.793 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:52:32.793 -08 000000036 INF: ===================Camera #0 Frame #117===================
17-02-28 20:52:32.815 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:52:32.815 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:52:32.815 -08 000000111 INF: ===================Camera #2 Frame #117===================
17-02-28 20:52:32.850 -08 000000087 INF: Y Motor: Unshifted Position: 3863327
17-02-28 20:52:32.900 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:32.911 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:32.966 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:52:32.966 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:52:32.966 -08 000000036 INF: ===================Camera #0 Frame #123===================
17-02-28 20:52:32.975 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:32.985 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:52:32.985 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:52:32.985 -08 000000111 INF: ===================Camera #2 Frame #124===================
17-02-28 20:52:33.026 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:33.136 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:52:33.136 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:52:33.136 -08 000000036 INF: ===================Camera #0 Frame #129===================
17-02-28 20:52:33.159 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:52:33.159 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:52:33.159 -08 000000111 INF: ===================Camera #2 Frame #130===================
17-02-28 20:52:33.161 -08 000000087 INF: Y Motor: Unshifted Position: 3661172
17-02-28 20:52:33.211 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:33.225 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:33.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:33.306 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:52:33.306 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:52:33.306 -08 000000036 INF: ===================Camera #0 Frame #136===================
17-02-28 20:52:33.330 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:52:33.330 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:52:33.330 -08 000000111 INF: ===================Camera #2 Frame #136===================
17-02-28 20:52:33.337 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:33.475 -08 000000087 INF: Y Motor: Unshifted Position: 3457722
17-02-28 20:52:33.479 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:52:33.479 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:52:33.479 -08 000000036 INF: ===================Camera #0 Frame #142===================
17-02-28 20:52:33.501 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:52:33.501 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:52:33.501 -08 000000111 INF: ===================Camera #2 Frame #143===================
17-02-28 20:52:33.525 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:33.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:33.599 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:33.649 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:52:33.649 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:52:33.649 -08 000000036 INF: ===================Camera #0 Frame #148===================
17-02-28 20:52:33.650 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:33.675 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:52:33.675 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:52:33.675 -08 000000111 INF: ===================Camera #2 Frame #149===================
17-02-28 20:52:33.787 -08 000000087 INF: Y Motor: Unshifted Position: 3255362
17-02-28 20:52:33.819 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:52:33.819 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:52:33.819 -08 000000036 INF: ===================Camera #0 Frame #154===================
17-02-28 20:52:33.837 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:33.846 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:52:33.846 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:52:33.846 -08 000000111 INF: ===================Camera #2 Frame #155===================
17-02-28 20:52:33.849 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:33.911 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:33.962 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:33.989 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:52:33.989 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:52:33.989 -08 000000036 INF: ===================Camera #0 Frame #161===================
17-02-28 20:52:34.016 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:52:34.016 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:52:34.016 -08 000000111 INF: ===================Camera #2 Frame #162===================
17-02-28 20:52:34.098 -08 000000087 INF: Y Motor: Unshifted Position: 3051911
17-02-28 20:52:34.148 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:34.160 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:52:34.160 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:52:34.160 -08 000000036 INF: ===================Camera #0 Frame #167===================
17-02-28 20:52:34.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:34.188 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:52:34.188 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:52:34.188 -08 000000111 INF: ===================Camera #2 Frame #168===================
17-02-28 20:52:34.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:34.273 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:34.328 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:52:34.328 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:52:34.328 -08 000000036 INF: ===================Camera #0 Frame #173===================
17-02-28 20:52:34.358 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:52:34.358 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:52:34.358 -08 000000111 INF: ===================Camera #2 Frame #174===================
17-02-28 20:52:34.410 -08 000000087 INF: Y Motor: Unshifted Position: 2848901
17-02-28 20:52:34.460 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:34.471 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:34.498 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:52:34.498 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:52:34.498 -08 000000036 INF: ===================Camera #0 Frame #179===================
17-02-28 20:52:34.529 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:52:34.529 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:52:34.529 -08 000000111 INF: ===================Camera #2 Frame #181===================
17-02-28 20:52:34.535 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:34.586 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:34.668 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:52:34.668 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:52:34.668 -08 000000036 INF: ===================Camera #0 Frame #186===================
17-02-28 20:52:34.703 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:52:34.703 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:52:34.703 -08 000000111 INF: ===================Camera #2 Frame #187===================
17-02-28 20:52:34.723 -08 000000087 INF: Y Motor: Unshifted Position: 2645242
17-02-28 20:52:34.773 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:34.785 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:34.841 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:52:34.841 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:52:34.841 -08 000000036 INF: ===================Camera #0 Frame #192===================
17-02-28 20:52:34.846 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:34.874 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:52:34.874 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:52:34.874 -08 000000111 INF: ===================Camera #2 Frame #193===================
17-02-28 20:52:34.897 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:35.011 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:52:35.011 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:52:35.011 -08 000000036 INF: ===================Camera #0 Frame #198===================
17-02-28 20:52:35.035 -08 000000087 INF: Y Motor: Unshifted Position: 2442441
17-02-28 20:52:35.045 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:52:35.045 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:52:35.045 -08 000000111 INF: ===================Camera #2 Frame #200===================
17-02-28 20:52:35.085 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:35.096 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:35.159 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:35.181 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:52:35.181 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:52:35.181 -08 000000036 INF: ===================Camera #0 Frame #205===================
17-02-28 20:52:35.210 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:35.219 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:52:35.219 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:52:35.219 -08 000000111 INF: ===================Camera #2 Frame #206===================
17-02-28 20:52:35.345 -08 000000087 INF: Y Motor: Unshifted Position: 2240942
17-02-28 20:52:35.354 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:52:35.354 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:52:35.354 -08 000000036 INF: ===================Camera #0 Frame #211===================
17-02-28 20:52:35.389 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:52:35.389 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:52:35.389 -08 000000111 INF: ===================Camera #2 Frame #212===================
17-02-28 20:52:35.395 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:35.409 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:35.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:35.522 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:35.524 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:52:35.524 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:52:35.524 -08 000000036 INF: ===================Camera #0 Frame #217===================
17-02-28 20:52:35.559 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:52:35.559 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:52:35.559 -08 000000111 INF: ===================Camera #2 Frame #219===================
17-02-28 20:52:35.659 -08 000000087 INF: Y Motor: Unshifted Position: 2037276
17-02-28 20:52:35.694 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:52:35.694 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:52:35.694 -08 000000036 INF: ===================Camera #0 Frame #223===================
17-02-28 20:52:35.709 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:35.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:35.733 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:52:35.733 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:52:35.733 -08 000000111 INF: ===================Camera #2 Frame #225===================
17-02-28 20:52:35.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:35.833 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:35.864 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:52:35.864 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:52:35.864 -08 000000036 INF: ===================Camera #0 Frame #230===================
17-02-28 20:52:35.904 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:52:35.904 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:52:35.905 -08 000000111 INF: ===================Camera #2 Frame #231===================
17-02-28 20:52:35.972 -08 000000087 INF: Y Motor: Unshifted Position: 1833604
17-02-28 20:52:36.022 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:36.032 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:36.056 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:52:36.056 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:52:36.056 -08 000000036 INF: ===================Camera #0 Frame #237===================
17-02-28 20:52:36.075 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:52:36.075 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:52:36.075 -08 000000111 INF: ===================Camera #2 Frame #238===================
17-02-28 20:52:36.095 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:36.146 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:36.229 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:52:36.229 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:52:36.229 -08 000000036 INF: ===================Camera #0 Frame #243===================
17-02-28 20:52:36.248 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:52:36.248 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:52:36.248 -08 000000111 INF: ===================Camera #2 Frame #244===================
17-02-28 20:52:36.282 -08 000000087 INF: Y Motor: Unshifted Position: 1631451
17-02-28 20:52:36.332 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:36.345 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:36.399 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:52:36.399 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:52:36.399 -08 000000036 INF: ===================Camera #0 Frame #249===================
17-02-28 20:52:36.407 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:36.419 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:52:36.419 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:52:36.419 -08 000000111 INF: ===================Camera #2 Frame #250===================
17-02-28 20:52:36.457 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:36.570 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:52:36.570 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:52:36.570 -08 000000036 INF: ===================Camera #0 Frame #256===================
17-02-28 20:52:36.591 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:52:36.591 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:52:36.591 -08 000000111 INF: ===================Camera #2 Frame #256===================
17-02-28 20:52:36.595 -08 000000087 INF: Y Motor: Unshifted Position: 1428653
17-02-28 20:52:36.645 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:36.658 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:36.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:36.743 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:52:36.743 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:52:36.743 -08 000000036 INF: ===================Camera #0 Frame #262===================
17-02-28 20:52:36.762 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:52:36.762 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:52:36.762 -08 000000111 INF: ===================Camera #2 Frame #263===================
17-02-28 20:52:36.771 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:36.907 -08 000000087 INF: Y Motor: Unshifted Position: 1224975
17-02-28 20:52:36.913 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:52:36.913 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:52:36.913 -08 000000036 INF: ===================Camera #0 Frame #268===================
17-02-28 20:52:36.936 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:52:36.936 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:52:36.936 -08 000000111 INF: ===================Camera #2 Frame #269===================
17-02-28 20:52:36.957 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:36.970 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:37.029 -08 000000064 INF: FPGA: Recv TDIYWAIT
17-02-28 20:52:37.029 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:52:37.030 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:37.031 -08 000000032 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:52:37.032 -08 000000071 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:52:37.032 -08 000000119 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:52:37.032 -08 000000071 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:52:37.032 -08 000000071 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:52:37.032 -08 000000071 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:52:37.032 -08 000000119 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:52:37.032 -08 000000119 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:52:37.032 -08 000000119 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:52:37.032 -08 000000071 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:52:37.033 -08 000000119 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:52:37.081 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:37.083 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:52:37.083 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:52:37.083 -08 000000036 INF: ===================Camera #0 Frame #272===================
17-02-28 20:52:37.096 -08 000000036 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:52:37.097 -08 000000036 INF: ===================CameraTDI Cleanup===================
17-02-28 20:52:37.219 -08 000000087 INF: Y Motor: Unshifted Position: 1022612
17-02-28 20:52:37.263 -08 000000036 INF: Camera #0 ReleaseBuffer
17-02-28 20:52:37.263 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:52:37.263 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:52:37.263 -08 000000111 INF: ===================Camera #2 Frame #272===================
17-02-28 20:52:37.263 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:52:37.269 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:37.272 -08 000000111 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:52:37.273 -08 000000111 INF: ===================CameraTDI Cleanup===================
17-02-28 20:52:37.280 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:37.297 -08 000000036 INF: ======================================
17-02-28 20:52:37.344 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:37.404 -08 000000055 INF: FPGA: Recv EX1MV
17-02-28 20:52:37.404 -08 000000055 INF: FPGA: Recv EX2MV
17-02-28 20:52:37.404 -08 000000119 INF: Excitation Filter 2: Moved 107 steps in 371.7618 ms
17-02-28 20:52:37.404 -08 000000071 INF: Excitation Filter 1: Moved 107 steps in 371.9656 ms
17-02-28 20:52:37.404 -08 000000119 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8956 ms
17-02-28 20:52:37.404 -08 000000119 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.0458 ms
17-02-28 20:52:37.404 -08 000000071 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0804 ms
17-02-28 20:52:37.404 -08 000000071 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.2617 ms
17-02-28 20:52:37.404 -08 000000119 INF: ======================================
17-02-28 20:52:37.404 -08 000000071 INF: ======================================
17-02-28 20:52:37.406 -08 000000087 INF: Y Motor: Unshifted Position: 990957
17-02-28 20:52:37.406 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:52:37.406 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:37.406 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:52:37.407 -08 000000032 INF: ======================================
17-02-28 20:52:37.470 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:52:37.470 -08 000000087 INF: Y Motor: Moved to 14.9096 after 7863 ms
17-02-28 20:52:37.470 -08 000000087 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:52:37.472 -08 000000111 INF: Camera #2 ReleaseBuffer
17-02-28 20:52:37.472 -08 000000111 INF: ===================Camera TDI===================
17-02-28 20:52:37.508 -08 000000111 INF: ======================================
17-02-28 20:52:37.509 -08 000000104 INF: ===================Camera TDI===================
17-02-28 20:52:37.510 -08 000000104 INF: ======================================
17-02-28 20:52:37.530 -08 000000087 INF: Y Motor: Recv v 4097\r
17-02-28 20:52:37.530 -08 000000087 INF: Y Motor: Status After move finished OK:
17-02-28 20:52:37.530 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:37.594 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:52:37.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:37.594 -08 000000087 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:37.594 -08 000000087 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:52:37.656 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:37.657 -08 000000087 INF: Y Motor: Recv v 134217728\r
17-02-28 20:52:37.657 -08 000000087 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:52:37.657 -08 000000087 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:52:37.657 -08 000000087 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:52:37.719 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:52:37.719 -08 000000087 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:52:37.719 -08 000000087 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:52:37.719 -08 000000087 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:37.782 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:52:37.782 -08 000000087 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:52:37.782 -08 000000087 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:37.844 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:52:37.844 -08 000000087 INF: ======================================
17-02-28 20:52:37.845 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:37.846 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:37.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:37.847 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:52:37.902 -08 000000064 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:52:37.902 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:52:37.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:37.968 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:37.968 -08 000000061 INF: FPGA: Recv TDIYERD 1490960
17-02-28 20:52:37.968 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:52:38.028 -08 000000071 INF: FPGA: Recv ZADCR 31459
17-02-28 20:52:38.028 -08 000000042 INF: At scan end Y pos = 14.910 and Z pos = -0.120. Y moved -48.539 mm
17-02-28 20:52:38.028 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:52:38.090 -08 000000035 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:52:38.090 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:52:38.090 -08 000000042 INF: TDIScan finished after 13219.3608 ms
17-02-28 20:52:38.090 -08 000000042 INF: Image[0]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm)
17-02-28 20:52:38.090 -08 000000042 INF: Image[2]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm)
17-02-28 20:52:38.092 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.124 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.783 um
17-02-28 20:52:38.124 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.125 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:52:38.154 -08 000000123 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:52:38.155 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.155 -08 000000055 INF: ===================Dither Clean Up Command===================
17-02-28 20:52:38.155 -08 000000084 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:52:38.155 -08 000000111 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:52:38.155 -08 000000077 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:52:38.156 -08 000000077 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:52:38.156 -08 000000084 INF: ======================================
17-02-28 20:52:38.156 -08 000000077 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:52:38.156 -08 000000111 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:52:38.156 -08 000000111 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:52:38.156 -08 000000129 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:52:38.156 -08 000000124 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:52:38.157 -08 000000129 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:52:38.159 -08 000000124 INF: ===================LFT:Extracting coords===================
17-02-28 20:52:38.184 -08 000000124 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:52:38.185 -08 000000124 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:52:38.185 -08 000000035 INF: ===================LookupFocusTracking===================
17-02-28 20:52:38.186 -08 000000031 INF: ===================LookupFocusTracking===================
17-02-28 20:52:38.186 -08 000000061 INF: ===================LookupFocusTracking===================
17-02-28 20:52:38.186 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:52:38.186 -08 000000035 INF: ===================Lookup Focus Tracking===================
17-02-28 20:52:38.186 -08 000000061 INF: ===================Lookup Focus Tracking===================
17-02-28 20:52:38.186 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:52:38.186 -08 000000031 INF: ===================Lookup Focus Tracking===================
17-02-28 20:52:38.216 -08 000000027 INF: FPGA: Recv ZSTEP 
17-02-28 20:52:38.216 -08 000000027 INF: FPGA: Recv ZSEL 
17-02-28 20:52:38.216 -08 000000129 INF: FPGA: Xmit ZDACW 38756\n
17-02-28 20:52:38.216 -08 000000077 INF: ======================================
17-02-28 20:52:38.218 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:52:38.218 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:38.218 -08 000000111 INF: ======================================
17-02-28 20:52:38.260 -08 000000035 INF: FC:B, C:5,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:52:38.260 -08 000000061 INF: FC:B, C:5,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:52:38.260 -08 000000087 INF: FC:B, C:5,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:52:38.260 -08 000000031 INF: FC:B, C:5,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:52:38.279 -08 000000036 INF: FPGA: Recv ZDACW 
17-02-28 20:52:38.280 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:38.280 -08 000000129 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:52:38.280 -08 000000129 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:52:38.341 -08 000000077 INF: FPGA: Recv TDIBB
17-02-28 20:52:38.341 -08 000000129 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:52:38.342 -08 000000129 INF: ======================================
17-02-28 20:52:38.411 -08 000000061 INF: LFT found best fwhm score 2.000011 in 151 ms
17-02-28 20:52:38.411 -08 000000061 INF: LFT found good score at index 7441 with fwhm value 2.000011. Next cycle, cycle 6 starting Z position for top surface is at -0.150 mm FC:B, C:5,L:1,T
17-02-28 20:52:38.412 -08 000000035 INF: LFT found best fwhm score 2.000243 in 151 ms
17-02-28 20:52:38.412 -08 000000035 INF: LFT found good score at index 8857 with fwhm value 2.000243. Next cycle, cycle 6 starting Z position for top surface is at -0.150 mm FC:B, C:5,L:1,T
17-02-28 20:52:38.412 -08 000000087 INF: LFT found best fwhm score 2.176913 in 152 ms
17-02-28 20:52:38.412 -08 000000087 INF: LFT found good score at index 2309 with fwhm value 2.176913. Next cycle, cycle 6 starting Z position for top surface is at -0.151 mm FC:B, C:5,L:1,T
17-02-28 20:52:38.412 -08 000000031 INF: LFT found best fwhm score 2.000004 in 152 ms
17-02-28 20:52:38.412 -08 000000031 INF: LFT found good score at index 8085 with fwhm value 2.000004. Next cycle, cycle 6 starting Z position for top surface is at -0.150 mm FC:B, C:5,L:1,T
17-02-28 20:52:38.412 -08 000000035 INF: ===================LookupFocusTracking===================
17-02-28 20:52:38.412 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:52:38.412 -08 000000031 INF: ===================LookupFocusTracking===================
17-02-28 20:52:38.412 -08 000000061 INF: ===================LookupFocusTracking===================
17-02-28 20:52:38.412 -08 000000035 INF: ======================================
17-02-28 20:52:38.412 -08 000000087 INF: ======================================
17-02-28 20:52:38.412 -08 000000031 INF: ======================================
17-02-28 20:52:38.412 -08 000000061 INF: ======================================
17-02-28 20:52:38.413 -08 000000124 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:52:38.414 -08 000000124 INF: LFT weighted average best Z for top surface is at -0.150mm FC:B, C:5,L:1,T
17-02-28 20:52:38.414 -08 000000124 INF: ======================================
17-02-28 20:52:38.415 -08 000000055 INF: ======================================
17-02-28 20:52:38.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:52:38.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:52:38.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:52:38.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:52:38.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:52:38.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:52:38.419 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:52:38.420 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:52:38.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:52:38.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:52:38.442 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:52:38.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:38.443 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:52:38.443 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:38.443 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:52:38.443 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:52:38.443 -08 000000042 INF: Transformed XStagePosition from 69.73964 mm to 69.6982392817736 mm.
17-02-28 20:52:38.457 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5579193554595 mm.
17-02-28 20:52:38.457 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3579193554595 mm.
17-02-28 20:52:38.457 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4486693554595 mm.
17-02-28 20:52:38.459 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:52:38.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:38.460 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -147.8 um, section = A_1
17-02-28 20:52:38.462 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:38.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:38.464 -08 000000035 INF: ===================MoveEmissionFilters===================
17-02-28 20:52:38.464 -08 000000092 INF: ===================Move X,Y===================
17-02-28 20:52:38.465 -08 000000092 INF: ===================Move X,Y, Parallel===================
17-02-28 20:52:38.467 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:52:38.468 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:52:38.469 -08 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:38.471 -08 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:52:38.472 -08 000000061 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:52:38.472 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:52:38.472 -08 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:38.474 -08 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:52:38.474 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:52:38.475 -08 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:52:38.476 -08 000000029 INF: ======================================
17-02-28 20:52:38.476 -08 000000032 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:52:38.477 -08 000000032 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:52:38.477 -08 000000031 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:52:38.477 -08 000000032 INF: ======================================
17-02-28 20:52:38.478 -08 000000029 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:52:38.478 -08 000000029 INF: ======================================
17-02-28 20:52:38.479 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:52:38.479 -08 000000031 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:52:38.479 -08 000000123 INF: ===================TDI Scan Setup===================
17-02-28 20:52:38.480 -08 000000029 INF: ===================Camera Arm TDI===================
17-02-28 20:52:38.480 -08 000000123 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:38.480 -08 000000087 INF: ======================================
17-02-28 20:52:38.481 -08 000000089 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:52:38.481 -08 000000089 INF: ======================================
17-02-28 20:52:38.481 -08 000000123 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:52:38.481 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:38.481 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:52:38.482 -08 000000107 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:52:38.482 -08 000000123 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:38.482 -08 000000072 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:52:38.482 -08 000000123 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:52:38.482 -08 000000029 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:52:38.483 -08 000000107 INF: ======================================
17-02-28 20:52:38.483 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:52:38.483 -08 000000072 INF: ======================================
17-02-28 20:52:38.484 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:52:38.484 -08 000000031 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:52:38.484 -08 000000067 INF: ======================================
17-02-28 20:52:38.485 -08 000000072 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:52:38.485 -08 000000031 INF: ======================================
17-02-28 20:52:38.485 -08 000000122 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:52:38.486 -08 000000072 INF: ======================================
17-02-28 20:52:38.486 -08 000000122 INF: ======================================
17-02-28 20:52:38.486 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1102 Request: {"Cycle":5,"Lane":1,"Tile":1102,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF245","HCSMMF252","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.490 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:52:38.491 -08 000000095 INF: ===================Move X Motor without settling===================
17-02-28 20:52:38.491 -08 000000095 INF: X Motor: Xmit PR VM\n
17-02-28 20:52:38.493 -08 000000032 INF: ======================================
17-02-28 20:52:38.495 -08 000000035 INF: ======================================
17-02-28 20:52:38.509 -08 000000119 INF: ===================Move Y Motor without settling===================
17-02-28 20:52:38.509 -08 000000119 INF: Y Motor: Moving to 64.5579 mm @25.000 mm/sec, started at 14.9096 mm
17-02-28 20:52:38.509 -08 000000119 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:52:38.509 -08 000000119 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:38.530 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:38.536 -08 000000104 INF: FPGA: Recv ZSEL 
17-02-28 20:52:38.537 -08 000000123 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:38.537 -08 000000123 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:52:38.538 -08 000000095 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:52:38.538 -08 000000095 INF: X Motor: Xmit PR VI\n
17-02-28 20:52:38.560 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1104 Request: {"Cycle":5,"Lane":1,"Tile":1104,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF225","HCSMMF272","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.565 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1101 Request: {"Cycle":5,"Lane":1,"Tile":1101,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF260","HCSMMF205","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.568 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1106 Request: {"Cycle":5,"Lane":1,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF207","HCSMMF269","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.576 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1105 Request: {"Cycle":5,"Lane":1,"Tile":1105,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF217","HCSMMF287","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.590 -08 000000088 INF: FPGA: Recv TDIBB
17-02-28 20:52:38.591 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:38.591 -08 000000123 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:38.592 -08 000000119 INF: Y Motor: Recv ok\r
17-02-28 20:52:38.592 -08 000000119 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:52:38.592 -08 000000119 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:38.592 -08 000000095 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:52:38.592 -08 000000095 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:52:38.592 -08 000000095 INF: X Motor: Moving to 69.6982 mm @15.000 mm/sec, started at 68.5972 mm
17-02-28 20:52:38.592 -08 000000095 INF: X Motor: Xmit MA 4382\n
17-02-28 20:52:38.593 -08 000000123 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:52:38.593 -08 000000123 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:38.595 -08 000000123 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:52:38.595 -08 000000123 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:52:38.595 -08 000000123 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:52:38.652 -08 000000088 INF: FPGA: Recv ZSTEP 
17-02-28 20:52:38.652 -08 000000123 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:38.652 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1103 Request: {"Cycle":5,"Lane":1,"Tile":1103,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF265","HCSMMF186","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.654 -08 000000095 INF: X Motor: Recv MA 4382\r\n>
17-02-28 20:52:38.654 -08 000000119 INF: Y Motor: Recv ok\r
17-02-28 20:52:38.654 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1108 Request: {"Cycle":5,"Lane":1,"Tile":1108,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF240","HCSMMF247","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.654 -08 000000119 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:38.654 -08 000000095 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:52:38.654 -08 000000123 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:52:38.655 -08 000000123 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:38.656 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1109 Request: {"Cycle":5,"Lane":1,"Tile":1109,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF249","HCSMMF266","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.656 -08 000000123 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:52:38.657 -08 000000123 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:52:38.657 -08 000000123 INF: Z Motor: Arming to move to -0.1078 mm
17-02-28 20:52:38.657 -08 000000123 INF: FPGA: Xmit ZYT 6435792 4\n
17-02-28 20:52:38.657 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1107 Request: {"Cycle":5,"Lane":1,"Tile":1107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF208","HCSMMF281","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.658 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1110 Request: {"Cycle":5,"Lane":1,"Tile":1110,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF189","HCSMMF246","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.659 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1112 Request: {"Cycle":5,"Lane":1,"Tile":1112,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF250","HCSMMF211","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.661 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1111 Request: {"Cycle":5,"Lane":1,"Tile":1111,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF257","HCSMMF212","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.664 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1114 Request: {"Cycle":5,"Lane":1,"Tile":1114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF276","HCSMMF277","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.667 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1116 Request: {"Cycle":5,"Lane":1,"Tile":1116,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF203","HCSMMF179","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.668 -08 000000122 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1115 Request: {"Cycle":5,"Lane":1,"Tile":1115,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF214","HCSMMF176","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.673 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1117 Request: {"Cycle":5,"Lane":1,"Tile":1117,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF258","HCSMMF222","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.677 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1118 Request: {"Cycle":5,"Lane":1,"Tile":1118,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF182","HCSMMF230","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.678 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1113 Request: {"Cycle":5,"Lane":1,"Tile":1113,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF254","HCSMMF202","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.687 -08 000000124 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1119 Request: {"Cycle":5,"Lane":1,"Tile":1119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF187","HCSMMF274","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.690 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1124 Request: {"Cycle":5,"Lane":1,"Tile":1124,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF253","HCSMMF233","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.691 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1121 Request: {"Cycle":5,"Lane":1,"Tile":1121,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF256","HCSMMF280","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.695 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1122 Request: {"Cycle":5,"Lane":1,"Tile":1122,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF183","HCSMMF285","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.696 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1125 Request: {"Cycle":5,"Lane":1,"Tile":1125,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF188","HCSMMF220","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.698 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1120 Request: {"Cycle":5,"Lane":1,"Tile":1120,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF197","HCSMMF282","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.702 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1123 Request: {"Cycle":5,"Lane":1,"Tile":1123,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF239","HCSMMF255","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.704 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1126 Request: {"Cycle":5,"Lane":1,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF191","HCSMMF223","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.711 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1128 Request: {"Cycle":5,"Lane":1,"Tile":1128,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF259","HCSMMF185","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.716 -08 000000080 INF: FPGA: Recv ZYT 
17-02-28 20:52:38.716 -08 000000123 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490957 enc / 14.910 mm / ) = 6435792 enc / 64.358 mm
17-02-28 20:52:38.716 -08 000000123 INF: FPGA: Xmit ZARM 28270\n
17-02-28 20:52:38.717 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1127 Request: {"Cycle":5,"Lane":1,"Tile":1127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF248","HCSMMF275","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:38.718 -08 000000119 INF: Y Motor: Recv v 0\r
17-02-28 20:52:38.718 -08 000000119 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:38.718 -08 000000119 INF: Y Motor: Set target position to 5955792 encoder counts
17-02-28 20:52:38.718 -08 000000119 INF: Y Motor: Xmit s r0xca 5955792\r
17-02-28 20:52:38.731 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:38.737 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:52:38.778 -08 000000087 INF: FPGA: Recv ZARM
17-02-28 20:52:38.778 -08 000000123 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9248 ms
17-02-28 20:52:38.778 -08 000000123 INF: Z Motor: ArmAbsStepped took 121.3133 ms
17-02-28 20:52:38.778 -08 000000123 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:38.780 -08 000000123 INF: ===================TDI Scan Setup===================
17-02-28 20:52:38.781 -08 000000123 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:52:38.782 -08 000000119 INF: Y Motor: Recv ok\r
17-02-28 20:52:38.782 -08 000000123 INF: ===================TDI Scan Setup===================
17-02-28 20:52:38.782 -08 000000119 INF: Y Motor: Start the move command
17-02-28 20:52:38.782 -08 000000119 INF: Y Motor: Xmit t 1\r
17-02-28 20:52:38.783 -08 000000123 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:52:38.783 -08 000000123 INF: ===================TDI Scan Setup===================
17-02-28 20:52:38.785 -08 000000123 INF: ======================================
17-02-28 20:52:38.841 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:38.842 -08 000000119 INF: Y Motor: Recv ok\r
17-02-28 20:52:38.842 -08 000000119 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:52:38.842 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:38.904 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:38.920 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:38.920 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:52:38.955 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:38.961 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:52:38.969 -08 000000119 INF: Y Motor: Unshifted Position: 1071173
17-02-28 20:52:39.019 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:39.066 -08 000000029 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:52:39.066 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:52:39.066 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:52:39.081 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:39.083 -08 000000029 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:52:39.122 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:39.128 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:52:39.143 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:39.154 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:39.215 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:39.215 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:39.215 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:39.216 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:52:39.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:52:39.229 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:39.235 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:52:39.277 -08 000000119 INF: Y Motor: Unshifted Position: 1775957
17-02-28 20:52:39.277 -08 000000095 INF: X Motor: Xmit PR ER\n
17-02-28 20:52:39.321 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:39.327 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:39.344 -08 000000095 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:52:39.344 -08 000000095 INF: X Motor: Moved to 69.6982 after 690 ms
17-02-28 20:52:39.344 -08 000000095 INF: ======================================
17-02-28 20:52:39.454 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:39.592 -08 000000119 INF: Y Motor: Unshifted Position: 2553477
17-02-28 20:52:39.614 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:52:39.642 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:39.672 -08 000000029 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:52:39.672 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:52:39.672 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:52:39.687 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:39.689 -08 000000029 INF: ===================Camera Arm TDI===================
17-02-28 20:52:39.690 -08 000000029 INF: ======================================
17-02-28 20:52:39.691 -08 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:39.692 -08 000000061 INF: ======================================
17-02-28 20:52:39.764 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:39.903 -08 000000119 INF: Y Motor: Unshifted Position: 3336753
17-02-28 20:52:39.953 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:40.077 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:40.213 -08 000000119 INF: Y Motor: Unshifted Position: 4112666
17-02-28 20:52:40.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:40.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:52:40.263 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:40.390 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:40.526 -08 000000119 INF: Y Motor: Unshifted Position: 4895095
17-02-28 20:52:40.576 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:40.700 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:40.792 -08 000000119 INF: Y Motor: Unshifted Position: 5583477
17-02-28 20:52:40.842 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:40.966 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:41.102 -08 000000119 INF: Y Motor: Unshifted Position: 5955788
17-02-28 20:52:41.152 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:41.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:41.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:52:41.291 -08 000000119 INF: Y Motor: Unshifted Position: 5955793
17-02-28 20:52:41.291 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:52:41.291 -08 000000119 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:41.355 -08 000000119 INF: Y Motor: Recv v 0\r
17-02-28 20:52:41.355 -08 000000119 INF: Y Motor: Moved to 64.5579 after 2513 ms
17-02-28 20:52:41.355 -08 000000119 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:52:41.417 -08 000000119 INF: Y Motor: Recv v 4096\r
17-02-28 20:52:41.417 -08 000000119 INF: Y Motor: Status After move finished OK:
17-02-28 20:52:41.417 -08 000000119 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:41.479 -08 000000119 INF: Y Motor: Recv v 0\r
17-02-28 20:52:41.479 -08 000000119 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:41.479 -08 000000119 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:52:41.540 -08 000000119 INF: Y Motor: Recv v 402653184\r
17-02-28 20:52:41.540 -08 000000119 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:52:41.540 -08 000000119 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:52:41.540 -08 000000119 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:52:41.601 -08 000000119 INF: Y Motor: Recv v 0\r
17-02-28 20:52:41.601 -08 000000119 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:52:41.601 -08 000000119 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:52:41.601 -08 000000119 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:41.666 -08 000000119 INF: Y Motor: Recv ok\r
17-02-28 20:52:41.666 -08 000000119 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:52:41.666 -08 000000119 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:41.726 -08 000000119 INF: Y Motor: Recv ok\r
17-02-28 20:52:41.726 -08 000000119 INF: ======================================
17-02-28 20:52:41.727 -08 000000092 INF: ===================Move X,Y===================
17-02-28 20:52:41.728 -08 000000092 INF: ======================================
17-02-28 20:52:41.730 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:41.731 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:41.731 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:52:41.731 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:52:41.791 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:52:41.791 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:52:41.851 -08 000000119 INF: FPGA: Recv ZFREQCL
17-02-28 20:52:41.851 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:52:41.852 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:41.852 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:52:41.913 -08 000000080 INF: FPGA: Recv TDIYERD 6455793
17-02-28 20:52:41.913 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455793 counts (64.558 mm)
17-02-28 20:52:41.914 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:41.914 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:41.915 -08 000000055 INF: ===================TDI FPGA Arm===================
17-02-28 20:52:41.915 -08 000000067 INF: ===================Set YMotor gains for scans===================
17-02-28 20:52:41.916 -08 000000067 INF: ======================================
17-02-28 20:52:41.916 -08 000000055 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:41.917 -08 000000055 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:52:41.917 -08 000000055 INF: FPGA: Xmit TDIYPOS 6344867\n
17-02-28 20:52:41.975 -08 000000031 INF: FPGA: Recv TDIYPOS
17-02-28 20:52:41.976 -08 000000055 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:41.977 -08 000000055 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:52:41.977 -08 000000055 INF: FPGA: Xmit TDIYARM3 139264 6435792 1 1\n
17-02-28 20:52:42.037 -08 000000064 INF: FPGA: Recv TDIYARM3
17-02-28 20:52:42.038 -08 000000055 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:42.039 -08 000000055 INF: ===================TDI FPGA Arm===================
17-02-28 20:52:42.040 -08 000000055 INF: ======================================
17-02-28 20:52:42.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:42.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:42.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:42.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:42.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:42.044 -08 000000056 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:52:42.044 -08 000000063 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:52:42.044 -08 000000056 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:52:42.044 -08 000000056 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:52:42.044 -08 000000056 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:52:42.044 -08 000000063 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:52:42.044 -08 000000056 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:52:42.044 -08 000000063 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:52:42.044 -08 000000063 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:52:42.045 -08 000000063 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:52:42.218 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:42.218 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:52:42.412 -08 000000094 INF: FPGA: Recv EX1MV
17-02-28 20:52:42.412 -08 000000094 INF: FPGA: Recv EX2MV
17-02-28 20:52:42.412 -08 000000056 INF: Excitation Filter 1: Moved -107 steps in 368.1415 ms
17-02-28 20:52:42.412 -08 000000056 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.3046 ms
17-02-28 20:52:42.412 -08 000000056 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.3787 ms
17-02-28 20:52:42.412 -08 000000063 INF: Excitation Filter 2: Moved -107 steps in 368.0453 ms
17-02-28 20:52:42.412 -08 000000063 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4924 ms
17-02-28 20:52:42.412 -08 000000063 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.5639 ms
17-02-28 20:52:42.413 -08 000000056 INF: ======================================
17-02-28 20:52:42.413 -08 000000063 INF: ======================================
17-02-28 20:52:42.414 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:42.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:42.416 -08 000000111 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:52:42.416 -08 000000122 INF: ===================Camera TDI===================
17-02-28 20:52:42.416 -08 000000084 INF: ===================Move Y Motor without settling===================
17-02-28 20:52:42.416 -08 000000036 INF: ===================FPGA Z Wait===================
17-02-28 20:52:42.416 -08 000000084 INF: Y Motor: Moving to 14.9096 mm @6.500 mm/sec, started at 64.5579 mm
17-02-28 20:52:42.416 -08 000000036 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:52:42.416 -08 000000084 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:52:42.416 -08 000000084 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:42.417 -08 000000111 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:52:42.417 -08 000000122 INF: ===================Camera TDI, Parallel===================
17-02-28 20:52:42.418 -08 000000111 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:52:42.418 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:52:42.420 -08 000000124 INF: ===================Camera TDI===================
17-02-28 20:52:42.420 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:42.420 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:42.421 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:42.421 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:42.476 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:52:42.476 -08 000000084 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:52:42.476 -08 000000084 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:42.538 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:52:42.538 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:42.570 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:42.570 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:42.571 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:42.571 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:42.601 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:52:42.601 -08 000000084 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:42.601 -08 000000084 INF: Y Motor: Set target position to 990958 encoder counts
17-02-28 20:52:42.601 -08 000000084 INF: Y Motor: Xmit s r0xca 990958\r
17-02-28 20:52:42.664 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:52:42.664 -08 000000084 INF: Y Motor: Start the move command
17-02-28 20:52:42.664 -08 000000084 INF: Y Motor: Xmit t 1\r
17-02-28 20:52:42.720 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:42.720 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:42.721 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:42.721 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:42.737 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:52:42.737 -08 000000084 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:52:42.738 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:42.787 -08 000000129 INF: FPGA: Recv ZWAIT 
17-02-28 20:52:42.790 -08 000000036 INF: ======================================
17-02-28 20:52:42.851 -08 000000084 INF: Y Motor: Unshifted Position: 5893718
17-02-28 20:52:42.870 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:52:42.870 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:52:42.870 -08 000000062 INF: ===================Camera #0 Frame #4===================
17-02-28 20:52:42.871 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:52:42.871 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:52:42.871 -08 000000124 INF: ===================Camera #2 Frame #4===================
17-02-28 20:52:42.901 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:43.025 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:43.033 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:52:43.033 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:52:43.033 -08 000000062 INF: ===================Camera #0 Frame #10===================
17-02-28 20:52:43.034 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:52:43.034 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:52:43.034 -08 000000124 INF: ===================Camera #2 Frame #10===================
17-02-28 20:52:43.161 -08 000000084 INF: Y Motor: Unshifted Position: 5694172
17-02-28 20:52:43.202 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:52:43.202 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:52:43.202 -08 000000062 INF: ===================Camera #0 Frame #17===================
17-02-28 20:52:43.203 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:52:43.203 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:52:43.203 -08 000000124 INF: ===================Camera #2 Frame #17===================
17-02-28 20:52:43.211 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:43.219 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:43.219 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:52:43.338 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:43.373 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:52:43.373 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:52:43.373 -08 000000062 INF: ===================Camera #0 Frame #23===================
17-02-28 20:52:43.375 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:52:43.375 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:52:43.375 -08 000000124 INF: ===================Camera #2 Frame #23===================
17-02-28 20:52:43.474 -08 000000084 INF: Y Motor: Unshifted Position: 5491810
17-02-28 20:52:43.524 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:43.546 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:52:43.546 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:52:43.546 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:52:43.546 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:52:43.546 -08 000000062 INF: ===================Camera #0 Frame #29===================
17-02-28 20:52:43.546 -08 000000124 INF: ===================Camera #2 Frame #29===================
17-02-28 20:52:43.648 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:43.722 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:52:43.722 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:52:43.722 -08 000000062 INF: ===================Camera #0 Frame #36===================
17-02-28 20:52:43.724 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:52:43.724 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:52:43.724 -08 000000124 INF: ===================Camera #2 Frame #36===================
17-02-28 20:52:43.785 -08 000000084 INF: Y Motor: Unshifted Position: 5289657
17-02-28 20:52:43.835 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:43.896 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:52:43.896 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:52:43.896 -08 000000124 INF: ===================Camera #2 Frame #42===================
17-02-28 20:52:43.903 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:52:43.903 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:52:43.903 -08 000000062 INF: ===================Camera #0 Frame #42===================
17-02-28 20:52:43.962 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:44.072 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:52:44.072 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:52:44.072 -08 000000062 INF: ===================Camera #0 Frame #49===================
17-02-28 20:52:44.075 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:52:44.075 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:52:44.075 -08 000000124 INF: ===================Camera #2 Frame #49===================
17-02-28 20:52:44.098 -08 000000084 INF: Y Motor: Unshifted Position: 5085993
17-02-28 20:52:44.148 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:44.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:44.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:44.216 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:52:44.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:44.253 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:52:44.253 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:52:44.253 -08 000000062 INF: ===================Camera #0 Frame #55===================
17-02-28 20:52:44.254 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:52:44.254 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:52:44.254 -08 000000124 INF: ===================Camera #2 Frame #55===================
17-02-28 20:52:44.272 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:44.315 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:52:44.348 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:52:44.348 -08 000000018 INF: Current Position of Pump is: 18240
17-02-28 20:52:44.411 -08 000000084 INF: Y Motor: Unshifted Position: 4882321
17-02-28 20:52:44.421 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:52:44.421 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:52:44.421 -08 000000062 INF: ===================Camera #0 Frame #61===================
17-02-28 20:52:44.423 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:52:44.423 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:52:44.423 -08 000000124 INF: ===================Camera #2 Frame #62===================
17-02-28 20:52:44.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:52:44.461 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:44.534 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:52:44.534 -08 000000018 INF: Current Position of Pump is: 18240
17-02-28 20:52:44.534 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:52:44.585 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:44.590 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:52:44.590 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:52:44.590 -08 000000062 INF: ===================Camera #0 Frame #68===================
17-02-28 20:52:44.596 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:52:44.596 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:52:44.596 -08 000000124 INF: ===================Camera #2 Frame #68===================
17-02-28 20:52:44.634 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD18240R\r
17-02-28 20:52:44.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:44.721 -08 000000084 INF: Y Motor: Unshifted Position: 4680823
17-02-28 20:52:44.762 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:52:44.762 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:52:44.762 -08 000000062 INF: ===================Camera #0 Frame #74===================
17-02-28 20:52:44.766 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:52:44.766 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:52:44.766 -08 000000124 INF: ===================Camera #2 Frame #74===================
17-02-28 20:52:44.771 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:44.820 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:44.847 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:44.898 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:44.930 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:52:44.930 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:52:44.930 -08 000000062 INF: ===================Camera #0 Frame #80===================
17-02-28 20:52:44.936 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:52:44.936 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:52:44.936 -08 000000124 INF: ===================Camera #2 Frame #80===================
17-02-28 20:52:45.034 -08 000000084 INF: Y Motor: Unshifted Position: 4477144
17-02-28 20:52:45.084 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:45.097 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:45.101 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:52:45.101 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:52:45.101 -08 000000062 INF: ===================Camera #0 Frame #86===================
17-02-28 20:52:45.105 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:52:45.105 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:52:45.105 -08 000000124 INF: ===================Camera #2 Frame #87===================
17-02-28 20:52:45.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:45.208 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:45.269 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:52:45.269 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:52:45.269 -08 000000062 INF: ===================Camera #0 Frame #93===================
17-02-28 20:52:45.277 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:52:45.277 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:52:45.277 -08 000000124 INF: ===================Camera #2 Frame #93===================
17-02-28 20:52:45.345 -08 000000084 INF: Y Motor: Unshifted Position: 4273046
17-02-28 20:52:45.395 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:45.407 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:45.440 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:52:45.440 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:52:45.440 -08 000000062 INF: ===================Camera #0 Frame #99===================
17-02-28 20:52:45.446 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:52:45.446 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:52:45.446 -08 000000124 INF: ===================Camera #2 Frame #99===================
17-02-28 20:52:45.471 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:45.522 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:45.610 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:52:45.610 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:52:45.610 -08 000000062 INF: ===================Camera #0 Frame #105===================
17-02-28 20:52:45.615 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:52:45.615 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:52:45.615 -08 000000124 INF: ===================Camera #2 Frame #105===================
17-02-28 20:52:45.658 -08 000000084 INF: Y Motor: Unshifted Position: 4071543
17-02-28 20:52:45.708 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:45.721 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:45.778 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:52:45.778 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:52:45.778 -08 000000062 INF: ===================Camera #0 Frame #111===================
17-02-28 20:52:45.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:45.784 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:52:45.784 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:52:45.784 -08 000000124 INF: ===================Camera #2 Frame #112===================
17-02-28 20:52:45.832 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:45.946 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:52:45.946 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:52:45.946 -08 000000062 INF: ===================Camera #0 Frame #118===================
17-02-28 20:52:45.956 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:52:45.956 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:52:45.956 -08 000000124 INF: ===================Camera #2 Frame #118===================
17-02-28 20:52:45.971 -08 000000084 INF: Y Motor: Unshifted Position: 3867228
17-02-28 20:52:46.021 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:46.032 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:46.095 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:46.117 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:52:46.117 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:52:46.117 -08 000000062 INF: ===================Camera #0 Frame #124===================
17-02-28 20:52:46.125 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:52:46.125 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:52:46.125 -08 000000124 INF: ===================Camera #2 Frame #124===================
17-02-28 20:52:46.146 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:46.283 -08 000000084 INF: Y Motor: Unshifted Position: 3665720
17-02-28 20:52:46.285 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:52:46.285 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:52:46.285 -08 000000062 INF: ===================Camera #0 Frame #130===================
17-02-28 20:52:46.294 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:52:46.294 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:52:46.294 -08 000000124 INF: ===================Camera #2 Frame #130===================
17-02-28 20:52:46.333 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:46.345 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:46.405 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:46.453 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:52:46.453 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:52:46.453 -08 000000062 INF: ===================Camera #0 Frame #136===================
17-02-28 20:52:46.457 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:46.464 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:52:46.464 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:52:46.464 -08 000000124 INF: ===================Camera #2 Frame #137===================
17-02-28 20:52:46.594 -08 000000084 INF: Y Motor: Unshifted Position: 3461413
17-02-28 20:52:46.622 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:52:46.622 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:52:46.622 -08 000000062 INF: ===================Camera #0 Frame #142===================
17-02-28 20:52:46.636 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:52:46.636 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:52:46.636 -08 000000124 INF: ===================Camera #2 Frame #143===================
17-02-28 20:52:46.644 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:46.656 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:46.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:46.771 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:46.790 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:52:46.790 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:52:46.790 -08 000000062 INF: ===================Camera #0 Frame #149===================
17-02-28 20:52:46.805 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:52:46.805 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:52:46.805 -08 000000124 INF: ===================Camera #2 Frame #149===================
17-02-28 20:52:46.906 -08 000000084 INF: Y Motor: Unshifted Position: 3258399
17-02-28 20:52:46.956 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:46.963 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:52:46.963 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:52:46.963 -08 000000062 INF: ===================Camera #0 Frame #155===================
17-02-28 20:52:46.972 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:46.975 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:52:46.975 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:52:46.975 -08 000000124 INF: ===================Camera #2 Frame #155===================
17-02-28 20:52:47.032 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:47.083 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:47.133 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:52:47.133 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:52:47.133 -08 000000062 INF: ===================Camera #0 Frame #161===================
17-02-28 20:52:47.146 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:52:47.146 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:52:47.146 -08 000000124 INF: ===================Camera #2 Frame #162===================
17-02-28 20:52:47.222 -08 000000084 INF: Y Motor: Unshifted Position: 3056900
17-02-28 20:52:47.272 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:47.282 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:47.301 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:52:47.301 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:52:47.301 -08 000000062 INF: ===================Camera #0 Frame #167===================
17-02-28 20:52:47.320 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:52:47.320 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:52:47.320 -08 000000124 INF: ===================Camera #2 Frame #168===================
17-02-28 20:52:47.342 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:47.342 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:52:47.342 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:52:47.395 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:47.469 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:52:47.469 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:52:47.469 -08 000000062 INF: ===================Camera #0 Frame #174===================
17-02-28 20:52:47.491 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:52:47.491 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:52:47.491 -08 000000124 INF: ===================Camera #2 Frame #174===================
17-02-28 20:52:47.530 -08 000000084 INF: Y Motor: Unshifted Position: 2852586
17-02-28 20:52:47.580 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:47.642 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:52:47.642 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:52:47.642 -08 000000062 INF: ===================Camera #0 Frame #180===================
17-02-28 20:52:47.662 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:52:47.662 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:52:47.662 -08 000000124 INF: ===================Camera #2 Frame #181===================
17-02-28 20:52:47.707 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:47.812 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:52:47.812 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:52:47.812 -08 000000062 INF: ===================Camera #0 Frame #186===================
17-02-28 20:52:47.836 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:52:47.836 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:52:47.836 -08 000000124 INF: ===================Camera #2 Frame #187===================
17-02-28 20:52:47.843 -08 000000084 INF: Y Motor: Unshifted Position: 2651093
17-02-28 20:52:47.893 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:47.982 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:52:47.982 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:52:47.982 -08 000000062 INF: ===================Camera #0 Frame #193===================
17-02-28 20:52:48.006 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:52:48.006 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:52:48.006 -08 000000124 INF: ===================Camera #2 Frame #193===================
17-02-28 20:52:48.017 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:48.154 -08 000000084 INF: Y Motor: Unshifted Position: 2446780
17-02-28 20:52:48.155 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:52:48.155 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:52:48.155 -08 000000062 INF: ===================Camera #0 Frame #199===================
17-02-28 20:52:48.177 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:52:48.177 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:52:48.177 -08 000000124 INF: ===================Camera #2 Frame #200===================
17-02-28 20:52:48.204 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:48.324 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:52:48.324 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:52:48.324 -08 000000062 INF: ===================Camera #0 Frame #205===================
17-02-28 20:52:48.331 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:48.351 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:52:48.351 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:52:48.351 -08 000000124 INF: ===================Camera #2 Frame #206===================
17-02-28 20:52:48.442 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:52:48.467 -08 000000084 INF: Y Motor: Unshifted Position: 2245277
17-02-28 20:52:48.494 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:52:48.494 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:52:48.494 -08 000000062 INF: ===================Camera #0 Frame #211===================
17-02-28 20:52:48.517 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:48.522 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:52:48.522 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:52:48.522 -08 000000124 INF: ===================Camera #2 Frame #212===================
17-02-28 20:52:48.528 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:48.628 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:48.641 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:48.652 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:48.664 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:52:48.664 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:52:48.664 -08 000000062 INF: ===================Camera #0 Frame #218===================
17-02-28 20:52:48.693 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:52:48.693 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:52:48.693 -08 000000124 INF: ===================Camera #2 Frame #219===================
17-02-28 20:52:48.778 -08 000000084 INF: Y Motor: Unshifted Position: 2040962
17-02-28 20:52:48.828 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:48.837 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:52:48.837 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:52:48.837 -08 000000062 INF: ===================Camera #0 Frame #224===================
17-02-28 20:52:48.868 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:52:48.868 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:52:48.868 -08 000000124 INF: ===================Camera #2 Frame #225===================
17-02-28 20:52:48.902 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:48.955 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:48.968 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:48.968 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:48.968 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:52:49.007 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:52:49.007 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:52:49.007 -08 000000062 INF: ===================Camera #0 Frame #230===================
17-02-28 20:52:49.039 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:52:49.039 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:52:49.039 -08 000000124 INF: ===================Camera #2 Frame #231===================
17-02-28 20:52:49.093 -08 000000084 INF: Y Motor: Unshifted Position: 1839457
17-02-28 20:52:49.143 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:49.177 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:52:49.177 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:52:49.177 -08 000000062 INF: ===================Camera #0 Frame #237===================
17-02-28 20:52:49.210 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:52:49.210 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:52:49.210 -08 000000124 INF: ===================Camera #2 Frame #238===================
17-02-28 20:52:49.267 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:49.350 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:52:49.350 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:52:49.350 -08 000000062 INF: ===================Camera #0 Frame #243===================
17-02-28 20:52:49.384 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:52:49.384 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:52:49.384 -08 000000124 INF: ===================Camera #2 Frame #244===================
17-02-28 20:52:49.402 -08 000000084 INF: Y Motor: Unshifted Position: 1635137
17-02-28 20:52:49.452 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:49.520 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:52:49.520 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:52:49.520 -08 000000062 INF: ===================Camera #0 Frame #249===================
17-02-28 20:52:49.554 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:52:49.554 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:52:49.554 -08 000000124 INF: ===================Camera #2 Frame #250===================
17-02-28 20:52:49.579 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:49.588 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:49.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:49.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:49.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:52:49.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:52:49.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°===================
17-02-28 20:52:49.690 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:52:49.690 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:52:49.690 -08 000000062 INF: ===================Camera #0 Frame #255===================
17-02-28 20:52:49.715 -08 000000084 INF: Y Motor: Unshifted Position: 1433417
17-02-28 20:52:49.725 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:52:49.725 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:52:49.725 -08 000000124 INF: ===================Camera #2 Frame #257===================
17-02-28 20:52:49.765 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:49.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:52:49.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:52:49.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:52:49.838 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:52:49.838 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:49.838 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:49.839 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:49.839 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:49.860 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:52:49.860 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:52:49.860 -08 000000062 INF: ===================Camera #0 Frame #262===================
17-02-28 20:52:49.889 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:49.899 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:52:49.899 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:52:49.899 -08 000000124 INF: ===================Camera #2 Frame #263===================
17-02-28 20:52:49.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:49.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)===================
17-02-28 20:52:49.901 -08 000000018 INF: Valve A1: Go to position 7
17-02-28 20:52:49.901 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:52:49.966 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:52:49.966 -08 000000018 INF: Valve A1: 25.710 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:52:49.966 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 8 to 7
17-02-28 20:52:49.966 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC7\r
17-02-28 20:52:49.966 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:52:49.966 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:52:50.026 -08 000000084 INF: Y Motor: Unshifted Position: 1228004
17-02-28 20:52:50.031 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:52:50.031 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:52:50.031 -08 000000062 INF: ===================Camera #0 Frame #268===================
17-02-28 20:52:50.069 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:52:50.069 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:52:50.070 -08 000000124 INF: ===================Camera #2 Frame #269===================
17-02-28 20:52:50.076 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:50.151 -08 000000096 INF: FPGA: Recv TDIYWAIT
17-02-28 20:52:50.151 -08 000000111 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:52:50.153 -08 000000111 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:52:50.154 -08 000000064 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:52:50.154 -08 000000095 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:52:50.154 -08 000000064 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:52:50.154 -08 000000064 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:52:50.154 -08 000000064 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:52:50.154 -08 000000095 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:52:50.154 -08 000000095 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:52:50.154 -08 000000095 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:52:50.154 -08 000000064 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:52:50.157 -08 000000095 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:52:50.204 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:50.214 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-02-28 20:52:50.214 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:50.214 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:52:50.234 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:52:50.234 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:52:50.234 -08 000000062 INF: ===================Camera #0 Frame #272===================
17-02-28 20:52:50.241 -08 000000124 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:52:50.241 -08 000000124 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:52:50.241 -08 000000124 INF: ===================Camera #2 Frame #272===================
17-02-28 20:52:50.246 -08 000000062 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:52:50.247 -08 000000062 INF: ===================CameraTDI Cleanup===================
17-02-28 20:52:50.251 -08 000000124 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:52:50.251 -08 000000124 INF: ===================CameraTDI Cleanup===================
17-02-28 20:52:50.339 -08 000000084 INF: Y Motor: Unshifted Position: 1027808
17-02-28 20:52:50.377 -08 000000062 INF: Camera #0 ReleaseBuffer
17-02-28 20:52:50.377 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:52:50.389 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:50.407 -08 000000062 INF: ======================================
17-02-28 20:52:50.523 -08 000000094 INF: FPGA: Recv EX2MV
17-02-28 20:52:50.523 -08 000000094 INF: FPGA: Recv EX1MV
17-02-28 20:52:50.523 -08 000000095 INF: Excitation Filter 1: Moved 107 steps in 368.6646 ms
17-02-28 20:52:50.523 -08 000000064 INF: Excitation Filter 2: Moved 107 steps in 368.8451 ms
17-02-28 20:52:50.523 -08 000000064 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.9661 ms
17-02-28 20:52:50.523 -08 000000095 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 368.7835 ms
17-02-28 20:52:50.523 -08 000000095 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 368.9767 ms
17-02-28 20:52:50.523 -08 000000064 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.0611 ms
17-02-28 20:52:50.523 -08 000000095 INF: ======================================
17-02-28 20:52:50.524 -08 000000064 INF: ======================================
17-02-28 20:52:50.525 -08 000000084 INF: Y Motor: Unshifted Position: 990959
17-02-28 20:52:50.525 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:52:50.525 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:50.525 -08 000000111 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:52:50.526 -08 000000111 INF: ======================================
17-02-28 20:52:50.545 -08 000000124 INF: Camera #2 ReleaseBuffer
17-02-28 20:52:50.545 -08 000000124 INF: ===================Camera TDI===================
17-02-28 20:52:50.580 -08 000000124 INF: ======================================
17-02-28 20:52:50.581 -08 000000122 INF: ===================Camera TDI===================
17-02-28 20:52:50.582 -08 000000122 INF: ======================================
17-02-28 20:52:50.591 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:52:50.591 -08 000000084 INF: Y Motor: Moved to 14.9096 after 7852 ms
17-02-28 20:52:50.591 -08 000000084 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:52:50.650 -08 000000084 INF: Y Motor: Recv v 4097\r
17-02-28 20:52:50.650 -08 000000084 INF: Y Motor: Status After move finished OK:
17-02-28 20:52:50.650 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:50.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:52:50.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:52:50.714 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:52:50.714 -08 000000084 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:50.714 -08 000000084 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:52:50.714 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:50.776 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:50.777 -08 000000084 INF: Y Motor: Recv v 134217728\r
17-02-28 20:52:50.777 -08 000000084 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:52:50.777 -08 000000084 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:52:50.777 -08 000000084 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:52:50.784 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:52:50.838 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:52:50.838 -08 000000084 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:52:50.838 -08 000000084 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:52:50.838 -08 000000084 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:50.876 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:52:50.903 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:52:50.903 -08 000000084 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:52:50.903 -08 000000084 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:50.964 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:52:50.964 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:52:50.964 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:52:50.964 -08 000000084 INF: ======================================
17-02-28 20:52:50.965 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:50.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:50.967 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:50.967 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:52:51.022 -08 000000111 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:52:51.022 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:52:51.064 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:52:51.087 -08 000000097 INF: FPGA: Recv TDIYERD 1490959
17-02-28 20:52:51.087 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:52:51.149 -08 000000104 INF: FPGA: Recv ZADCR 31508
17-02-28 20:52:51.149 -08 000000042 INF: At scan end Y pos = 14.910 and Z pos = -0.121. Y moved -48.539 mm
17-02-28 20:52:51.149 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:52:51.150 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:51.212 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:52:51.212 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:52:51.212 -08 000000042 INF: TDIScan finished after 12768.1275 ms
17-02-28 20:52:51.212 -08 000000042 INF: Image[0]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm)
17-02-28 20:52:51.212 -08 000000042 INF: Image[2]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm)
17-02-28 20:52:51.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:51.249 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.643 um
17-02-28 20:52:51.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:51.250 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:51.250 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:52:51.273 -08 000000077 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:52:51.274 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:51.274 -08 000000072 INF: ===================Dither Clean Up Command===================
17-02-28 20:52:51.274 -08 000000063 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:52:51.274 -08 000000096 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:52:51.274 -08 000000124 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:52:51.275 -08 000000124 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:52:51.275 -08 000000124 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:52:51.275 -08 000000063 INF: ======================================
17-02-28 20:52:51.275 -08 000000096 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:52:51.275 -08 000000096 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:52:51.275 -08 000000031 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:52:51.275 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:52:51.276 -08 000000031 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:52:51.278 -08 000000036 INF: ===================LFT:Extracting coords===================
17-02-28 20:52:51.304 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:52:51.304 -08 000000036 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:52:51.305 -08 000000122 INF: ===================LookupFocusTracking===================
17-02-28 20:52:51.305 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:52:51.305 -08 000000084 INF: ===================LookupFocusTracking===================
17-02-28 20:52:51.305 -08 000000035 INF: ===================LookupFocusTracking===================
17-02-28 20:52:51.305 -08 000000122 INF: ===================Lookup Focus Tracking===================
17-02-28 20:52:51.305 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:52:51.306 -08 000000035 INF: ===================Lookup Focus Tracking===================
17-02-28 20:52:51.306 -08 000000084 INF: ===================Lookup Focus Tracking===================
17-02-28 20:52:51.335 -08 000000123 INF: FPGA: Recv ZSTEP 
17-02-28 20:52:51.335 -08 000000123 INF: FPGA: Recv ZSEL 
17-02-28 20:52:51.335 -08 000000031 INF: FPGA: Xmit ZDACW 38756\n
17-02-28 20:52:51.335 -08 000000124 INF: ======================================
17-02-28 20:52:51.336 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:51.337 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:52:51.337 -08 000000096 INF: ======================================
17-02-28 20:52:51.380 -08 000000122 INF: FC:B, C:5,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:52:51.380 -08 000000109 INF: FC:B, C:5,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:52:51.380 -08 000000084 INF: FC:B, C:5,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:52:51.380 -08 000000035 INF: FC:B, C:5,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:52:51.397 -08 000000056 INF: FPGA: Recv ZDACW 
17-02-28 20:52:51.398 -08 000000031 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:52:51.398 -08 000000031 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:52:51.459 -08 000000064 INF: FPGA: Recv TDIBB
17-02-28 20:52:51.459 -08 000000031 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:52:51.460 -08 000000031 INF: ======================================
17-02-28 20:52:51.531 -08 000000122 INF: LFT found best fwhm score 2.000048 in 151 ms
17-02-28 20:52:51.531 -08 000000122 INF: LFT found good score at index 8157 with fwhm value 2.000048. Next cycle, cycle 6 starting Z position for top surface is at -0.150 mm FC:B, C:5,L:1,T
17-02-28 20:52:51.531 -08 000000122 INF: ===================LookupFocusTracking===================
17-02-28 20:52:51.531 -08 000000084 INF: LFT found best fwhm score 2.000345 in 151 ms
17-02-28 20:52:51.531 -08 000000109 INF: LFT found best fwhm score 2.000206 in 151 ms
17-02-28 20:52:51.531 -08 000000109 INF: LFT found good score at index 3173 with fwhm value 2.000206. Next cycle, cycle 6 starting Z position for top surface is at -0.151 mm FC:B, C:5,L:1,T
17-02-28 20:52:51.531 -08 000000122 INF: ======================================
17-02-28 20:52:51.531 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:52:51.532 -08 000000109 INF: ======================================
17-02-28 20:52:51.532 -08 000000035 INF: LFT found best fwhm score 2.104154 in 152 ms
17-02-28 20:52:51.532 -08 000000035 INF: LFT found good score at index 7509 with fwhm value 2.104154. Next cycle, cycle 6 starting Z position for top surface is at -0.150 mm FC:B, C:5,L:1,T
17-02-28 20:52:51.532 -08 000000084 INF: LFT found good score at index 7941 with fwhm value 2.000345. Next cycle, cycle 6 starting Z position for top surface is at -0.150 mm FC:B, C:5,L:1,T
17-02-28 20:52:51.532 -08 000000035 INF: ===================LookupFocusTracking===================
17-02-28 20:52:51.532 -08 000000084 INF: ===================LookupFocusTracking===================
17-02-28 20:52:51.532 -08 000000035 INF: ======================================
17-02-28 20:52:51.533 -08 000000084 INF: ======================================
17-02-28 20:52:51.534 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:52:51.535 -08 000000036 INF: LFT weighted average best Z for top surface is at -0.150mm FC:B, C:5,L:1,T
17-02-28 20:52:51.535 -08 000000036 INF: ======================================
17-02-28 20:52:51.536 -08 000000072 INF: ======================================
17-02-28 20:52:51.537 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:51.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:52:51.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:51.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:52:51.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:51.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:52:51.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:51.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:52:51.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:51.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:52:51.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:52:51.540 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Waiting for image analysis===================
17-02-28 20:52:51.540 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:52:51.540 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:52:51.540 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:52:51.563 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:52:51.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:51.564 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:51.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:51.564 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:52:51.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 1===================
17-02-28 20:52:51.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface===================
17-02-28 20:52:51.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:51.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:51.583 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:52:51.583 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:52:51.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:51.627 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1204 Request: {"Cycle":5,"Lane":1,"Tile":1204,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF188","HCSMMF221","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.665 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:51.676 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:52:51.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:51.679 -08 000000042 INF: TopSurfaceZPositions[] was -0.155392085274901, so used the TopSurfaceZPositions[] (-0.155392085274901) + compensator value (0.0227).
17-02-28 20:52:51.743 -08 000000042 INF: LFT enabled: Best z-height for LaneTopSurface and Illumina.Instrument.Logic.Sentrix.II.SentrixSection was found to be -0.132692085274901
17-02-28 20:52:51.744 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:52:51.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:51.749 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:51.750 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1201 Request: {"Cycle":5,"Lane":1,"Tile":1201,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF218","HCSMMF275","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:52:51.766 -08 000000111 INF: ===================Move Tilt Motor 1===================
17-02-28 20:52:51.766 -08 000000111 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0762 mm, delta = -0.0757 mm
17-02-28 20:52:51.767 -08 000000111 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:51.774 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1206 Request: {"Cycle":5,"Lane":1,"Tile":1206,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF177","HCSMMF220","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.780 -08 000000061 INF: ===================Move Tilt Motor 2===================
17-02-28 20:52:51.780 -08 000000061 INF: Tilt Motor 2: Moving to 5.3924 mm, started at 5.2644 mm, delta = 0.1280 mm
17-02-28 20:52:51.780 -08 000000124 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1203 Request: {"Cycle":5,"Lane":1,"Tile":1203,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF239","HCSMMF255","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.780 -08 000000061 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:51.780 -08 000000038 INF: ===================Move Tilt Motor 3===================
17-02-28 20:52:51.781 -08 000000038 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.2113 mm, delta = 0.1278 mm
17-02-28 20:52:51.782 -08 000000038 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:51.782 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1217 Request: {"Cycle":5,"Lane":1,"Tile":1217,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF209","HCSMMF281","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.786 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1202 Request: {"Cycle":5,"Lane":1,"Tile":1202,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF270","HCSMMF194","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.789 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1209 Request: {"Cycle":5,"Lane":1,"Tile":1209,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF183","HCSMMF254","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.791 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1210 Request: {"Cycle":5,"Lane":1,"Tile":1210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF198","HCSMMF253","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.800 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1207 Request: {"Cycle":5,"Lane":1,"Tile":1207,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF258","HCSMMF196","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.804 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1215 Request: {"Cycle":5,"Lane":1,"Tile":1215,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF283","HCSMMF276","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.804 -08 000000080 INF: FPGA: Recv T1RD 19985
17-02-28 20:52:51.804 -08 000000080 INF: FPGA: Recv T2RD 20725
17-02-28 20:52:51.804 -08 000000080 INF: FPGA: Recv T3RD 20517
17-02-28 20:52:51.804 -08 000000061 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6
17-02-28 20:52:51.804 -08 000000038 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:52:51.804 -08 000000038 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:52:51.805 -08 000000038 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:52:51.805 -08 000000111 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6
17-02-28 20:52:51.805 -08 000000111 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:52:51.805 -08 000000061 INF: Tilt Motor 2: Moving to 21230 encoder counts
17-02-28 20:52:51.806 -08 000000061 INF: FPGA: Xmit T2MOVETO 21230\n
17-02-28 20:52:51.808 -08 000000111 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:52:51.808 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1212 Request: {"Cycle":5,"Lane":1,"Tile":1212,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF266","HCSMMF212","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.817 -08 000000122 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1211 Request: {"Cycle":5,"Lane":1,"Tile":1211,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF227","HCSMMF213","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.821 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1213 Request: {"Cycle":5,"Lane":1,"Tile":1213,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF247","HCSMMF204","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.823 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1208 Request: {"Cycle":5,"Lane":1,"Tile":1208,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF176","HCSMMF202","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.828 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1214 Request: {"Cycle":5,"Lane":1,"Tile":1214,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF187","HCSMMF233","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.832 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1220 Request: {"Cycle":5,"Lane":1,"Tile":1220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF193","HCSMMF179","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.834 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1216 Request: {"Cycle":5,"Lane":1,"Tile":1216,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF178","HCSMMF210","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.838 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1218 Request: {"Cycle":5,"Lane":1,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF206","HCSMMF279","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.839 -08 000000120 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1221 Request: {"Cycle":5,"Lane":1,"Tile":1221,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF203","HCSMMF246","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.840 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1205 Request: {"Cycle":5,"Lane":1,"Tile":1205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF237","HCSMMF232","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.844 -08 000000119 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1222 Request: {"Cycle":5,"Lane":1,"Tile":1222,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF286","HCSMMF205","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.845 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1227 Request: {"Cycle":5,"Lane":1,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF250","HCSMMF260","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.849 -08 000000126 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1223 Request: {"Cycle":5,"Lane":1,"Tile":1223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF216","HCSMMF245","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.852 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1219 Request: {"Cycle":5,"Lane":1,"Tile":1219,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF235","HCSMMF182","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.855 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1226 Request: {"Cycle":5,"Lane":1,"Tile":1226,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF190","HCSMMF265","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.860 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1224 Request: {"Cycle":5,"Lane":1,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF272","HCSMMF225","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.867 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:51.868 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1228 Request: {"Cycle":5,"Lane":1,"Tile":1228,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF278","HCSMMF211","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.874 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 5 Tile: 1225 Request: {"Cycle":5,"Lane":1,"Tile":1225,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF238","HCSMMF200","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:52:51.887 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:51.893 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:52:51.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:51.988 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:51.988 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:52:51.990 -08 000000129 INF: FPGA: Recv T1MOVETO 49
17-02-28 20:52:51.990 -08 000000111 INF: Tilt Motor 1: To move from 5.076 to 5.000 (-0.076 mm) should take 50 steps, but required 49 steps (0.075 mm). Slippage = -0.002 mm (0.02%)
17-02-28 20:52:51.990 -08 000000111 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:52.025 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:52.031 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:52:52.052 -08 000000070 INF: FPGA: Recv T1RD 19693
17-02-28 20:52:52.052 -08 000000070 INF: FPGA: Recv T3MOVETO 83
17-02-28 20:52:52.052 -08 000000070 INF: FPGA: Recv T2MOVETO 83
17-02-28 20:52:52.052 -08 000000061 INF: Tilt Motor 2: To move from 5.264 to 5.392 (0.128 mm) should take 84 steps, but required 83 steps (0.126 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:52:52.052 -08 000000061 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:52.052 -08 000000038 INF: Tilt Motor 3: To move from 5.211 to 5.339 (0.128 mm) should take 84 steps, but required 83 steps (0.126 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:52:52.052 -08 000000111 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:52:52.053 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:52:52.053 -08 000000038 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:52.053 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:52:52.055 -08 000000111 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:52.116 -08 000000124 INF: FPGA: Recv T2RD 21224
17-02-28 20:52:52.116 -08 000000124 INF: FPGA: Recv T3RD 21015
17-02-28 20:52:52.116 -08 000000124 INF: FPGA: Recv T1RD 19693
17-02-28 20:52:52.116 -08 000000111 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:52:52.116 -08 000000038 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:52:52.116 -08 000000061 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:52:52.116 -08 000000111 INF: FPGA: Xmit T1RD\n
17-02-28 20:52:52.118 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:52.119 -08 000000038 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:52.120 -08 000000061 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:52.124 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:52:52.153 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP11904R\r
17-02-28 20:52:52.177 -08 000000070 INF: FPGA: Recv T1RD 19693
17-02-28 20:52:52.177 -08 000000070 INF: FPGA: Recv T3RD 21015
17-02-28 20:52:52.177 -08 000000070 INF: FPGA: Recv T2RD 21224
17-02-28 20:52:52.177 -08 000000061 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:52:52.177 -08 000000038 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:52:52.177 -08 000000061 INF: FPGA: Xmit T2RD\n
17-02-28 20:52:52.177 -08 000000111 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:52:52.177 -08 000000111 INF: Tilt Motor 1: After move to 5.0005, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:52.177 -08 000000111 INF: Tilt Motor 1: Moved to 5.0020 after 411.0588 ms
17-02-28 20:52:52.178 -08 000000111 INF: ======================================
17-02-28 20:52:52.178 -08 000000038 INF: FPGA: Xmit T3RD\n
17-02-28 20:52:52.211 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:52.216 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:52:52.239 -08 000000118 INF: FPGA: Recv T2RD 21224
17-02-28 20:52:52.239 -08 000000118 INF: FPGA: Recv T3RD 21015
17-02-28 20:52:52.239 -08 000000038 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:52:52.239 -08 000000061 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:52:52.239 -08 000000038 INF: Tilt Motor 3: After move to 5.3391, error = -0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:52.239 -08 000000061 INF: Tilt Motor 2: After move to 5.3924, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:52.239 -08 000000038 INF: Tilt Motor 3: Moved to 5.3378 after 458.5921 ms
17-02-28 20:52:52.239 -08 000000061 INF: Tilt Motor 2: Moved to 5.3909 after 459.184 ms
17-02-28 20:52:52.240 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:52.240 -08 000000038 INF: ======================================
17-02-28 20:52:52.240 -08 000000061 INF: ======================================
17-02-28 20:52:52.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:52.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:52.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:52.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:52.243 -08 000000042 INF: Compensator: Remaining IntoPath
17-02-28 20:52:52.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:52.244 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:52:52.250 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39664, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:52:52.250 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50464, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:52:52.256 -08 000000042 INF: Swath 0: Converted transform from (-57.12006, 25.25529) pixels to (-0.019665, 0.008625) mm.
17-02-28 20:52:52.262 -08 000000042 INF: Swath 1: Converted transform from (-69.91223, 22.7463) pixels to (-0.02415, 0.007935) mm.
17-02-28 20:52:52.262 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:52:52.263 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:52:52.263 -08 000000042 INF: Transformed XStagePosition from 71.39664 mm to 71.376971963793 mm.
17-02-28 20:52:52.274 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5617143552527 mm.
17-02-28 20:52:52.274 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3617143552527 mm.
17-02-28 20:52:52.274 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4524643552527 mm.
17-02-28 20:52:52.277 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:52.277 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:52:52.277 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:52.277 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -147.8 um, section = B_1
17-02-28 20:52:52.281 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:52.282 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:52.282 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:52:52.282 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:52.283 -08 000000070 INF: ===================Move X,Y===================
17-02-28 20:52:52.283 -08 000000027 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:52:52.283 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:52:52.283 -08 000000123 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:52:52.283 -08 000000070 INF: ===================Move X,Y, Parallel===================
17-02-28 20:52:52.283 -08 000000111 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:52:52.284 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:52:52.284 -08 000000029 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:52:52.284 -08 000000029 INF: Z Motor: Moving to -0.1527 mm, started at -0.1478 mm
17-02-28 20:52:52.284 -08 000000029 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:52:52.284 -08 000000027 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:52:52.284 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:52:52.284 -08 000000123 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:52:52.284 -08 000000111 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:52:52.285 -08 000000119 INF: ===================Move X Motor without settling===================
17-02-28 20:52:52.285 -08 000000052 INF: ===================Move Y Motor without settling===================
17-02-28 20:52:52.285 -08 000000119 INF: X Motor: Xmit PR VM\n
17-02-28 20:52:52.285 -08 000000052 INF: Y Motor: Moving to 64.5617 mm @25.000 mm/sec, started at 14.9096 mm
17-02-28 20:52:52.285 -08 000000093 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:52:52.285 -08 000000094 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:52:52.285 -08 000000040 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:52:52.285 -08 000000120 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:52:52.285 -08 000000040 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:52:52.285 -08 000000052 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:52:52.285 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:52.285 -08 000000031 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:52:52.285 -08 000000104 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:52:52.285 -08 000000087 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:52:52.286 -08 000000120 INF: ======================================
17-02-28 20:52:52.286 -08 000000055 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:52:52.286 -08 000000031 INF: ======================================
17-02-28 20:52:52.286 -08 000000087 INF: ======================================
17-02-28 20:52:52.286 -08 000000055 INF: ======================================
17-02-28 20:52:52.286 -08 000000040 INF: ======================================
17-02-28 20:52:52.287 -08 000000104 INF: ======================================
17-02-28 20:52:52.287 -08 000000123 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:52:52.288 -08 000000093 INF: ======================================
17-02-28 20:52:52.288 -08 000000094 INF: ======================================
17-02-28 20:52:52.288 -08 000000111 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:52:52.288 -08 000000123 INF: ======================================
17-02-28 20:52:52.289 -08 000000027 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:52:52.289 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:52:52.290 -08 000000111 INF: ======================================
17-02-28 20:52:52.291 -08 000000027 INF: ======================================
17-02-28 20:52:52.291 -08 000000059 INF: ======================================
17-02-28 20:52:52.292 -08 000000064 INF: ======================================
17-02-28 20:52:52.302 -08 000000032 INF: FPGA: Recv ZTRG 
17-02-28 20:52:52.302 -08 000000029 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:52:52.308 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:52:52.340 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:52.366 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:52:52.366 -08 000000052 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:52:52.366 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:52.366 -08 000000080 INF: FPGA: Recv ZYT 
17-02-28 20:52:52.366 -08 000000029 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:52:52.367 -08 000000029 INF: FPGA: Xmit ZMV 40027\n
17-02-28 20:52:52.369 -08 000000119 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:52:52.369 -08 000000119 INF: X Motor: Xmit PR VI\n
17-02-28 20:52:52.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:52.430 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:52:52.430 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:52.431 -08 000000119 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:52:52.431 -08 000000119 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:52:52.431 -08 000000119 INF: X Motor: Moving to 71.3770 mm @15.000 mm/sec, started at 69.6982 mm
17-02-28 20:52:52.431 -08 000000123 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:52:52.431 -08 000000123 INF: FPGA: Recv ZMV 
17-02-28 20:52:52.431 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:52:52.431 -08 000000029 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.2614 ms
17-02-28 20:52:52.431 -08 000000029 INF: FPGA: Xmit ZDACR\n
17-02-28 20:52:52.431 -08 000000119 INF: X Motor: Xmit MA 5070\n
17-02-28 20:52:52.490 -08 000000059 INF: FPGA: Recv ZDACR 40027
17-02-28 20:52:52.490 -08 000000029 INF: Z Motor: MoveAndTrigger took 206.172 ms w/comms
17-02-28 20:52:52.490 -08 000000029 INF: Z Motor: After move to -0.1527, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:52:52.490 -08 000000029 INF: Z Motor: MoveAbsStepped took 206.3462 ms
17-02-28 20:52:52.490 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:52.492 -08 000000119 INF: X Motor: Recv MA 5070\r\n>
17-02-28 20:52:52.492 -08 000000119 INF: X Motor: WaitUntilStopped 60112
17-02-28 20:52:52.492 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:52:52.493 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:52:52.493 -08 000000052 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:52.493 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:52:52.493 -08 000000052 INF: Y Motor: Set target position to 5956171 encoder counts
17-02-28 20:52:52.493 -08 000000122 INF: ===================Camera Arm TDI===================
17-02-28 20:52:52.493 -08 000000052 INF: Y Motor: Xmit s r0xca 5956171\r
17-02-28 20:52:52.494 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:52.494 -08 000000122 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:52.494 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:52:52.495 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:52.495 -08 000000122 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:52:52.495 -08 000000072 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:52:52.552 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:52:52.553 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:52.553 -08 000000072 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:52:52.554 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:52:52.554 -08 000000052 INF: Y Motor: Start the move command
17-02-28 20:52:52.554 -08 000000052 INF: Y Motor: Xmit t 1\r
17-02-28 20:52:52.592 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:52:52.617 -08 000000036 INF: FPGA: Recv TDIBB
17-02-28 20:52:52.618 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:52:52.619 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:52:52.619 -08 000000052 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:52:52.619 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:52.619 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:52:52.619 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:52.621 -08 000000072 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:52:52.621 -08 000000072 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:52:52.621 -08 000000072 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:52:52.678 -08 000000061 INF: FPGA: Recv ZSTEP 
17-02-28 20:52:52.679 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:52.681 -08 000000072 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:52:52.681 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:52.681 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:52.683 -08 000000072 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:52:52.683 -08 000000072 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:52:52.683 -08 000000072 INF: Z Motor: Arming to move to -0.1127 mm
17-02-28 20:52:52.683 -08 000000072 INF: FPGA: Xmit ZYT 6436171 4\n
17-02-28 20:52:52.740 -08 000000094 INF: FPGA: Recv ZYT 
17-02-28 20:52:52.740 -08 000000072 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490959 enc / 14.910 mm / ) = 6436171 enc / 64.362 mm
17-02-28 20:52:52.740 -08 000000072 INF: FPGA: Xmit ZARM 29541\n
17-02-28 20:52:52.741 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:52.743 -08 000000052 INF: Y Motor: Unshifted Position: 1076344
17-02-28 20:52:52.793 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:52.803 -08 000000088 INF: FPGA: Recv ZARM
17-02-28 20:52:52.803 -08 000000072 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.079 ms
17-02-28 20:52:52.803 -08 000000072 INF: Z Motor: ArmAbsStepped took 120.3557 ms
17-02-28 20:52:52.804 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:52:52.805 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:52:52.807 -08 000000072 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:52:52.807 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:52:52.809 -08 000000072 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:52:52.809 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:52:52.810 -08 000000072 INF: ======================================
17-02-28 20:52:52.916 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:52.991 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:53.051 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:53.052 -08 000000052 INF: Y Motor: Unshifted Position: 1783454
17-02-28 20:52:53.102 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:53.117 -08 000000119 INF: X Motor: Xmit PR ER\n
17-02-28 20:52:53.165 -08 000000122 INF: Camera #0 AttachBuffer (imageDataPtr = 56923197488 imgPtr = 56923197488 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:52:53.165 -08 000000122 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:52:53.165 -08 000000122 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:52:53.179 -08 000000119 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:52:53.179 -08 000000119 INF: X Motor: Moved to 71.3779 after 687 ms
17-02-28 20:52:53.179 -08 000000119 INF: ======================================
17-02-28 20:52:53.181 -08 000000122 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:53.183 -08 000000122 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:52:53.229 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:53.303 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:53.363 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:53.365 -08 000000052 INF: Y Motor: Unshifted Position: 2563476
17-02-28 20:52:53.415 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:53.539 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:53.613 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:53.677 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:53.680 -08 000000052 INF: Y Motor: Unshifted Position: 3344252
17-02-28 20:52:53.730 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:53.800 -08 000000122 INF: Camera #2 AttachBuffer (imageDataPtr = 58735136816 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:52:53.801 -08 000000122 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:52:53.801 -08 000000122 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:52:53.816 -08 000000122 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:52:53.818 -08 000000122 INF: ===================Camera Arm TDI===================
17-02-28 20:52:53.819 -08 000000122 INF: ======================================
17-02-28 20:52:53.820 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:52:53.822 -08 000000029 INF: ======================================
17-02-28 20:52:53.853 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:53.927 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:53.989 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:53.989 -08 000000052 INF: Y Motor: Unshifted Position: 4121825
17-02-28 20:52:54.039 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:54.165 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:54.239 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:54.299 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:54.300 -08 000000052 INF: Y Motor: Unshifted Position: 4900093
17-02-28 20:52:54.350 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:54.476 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:54.549 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:54.614 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:54.614 -08 000000052 INF: Y Motor: Unshifted Position: 5693499
17-02-28 20:52:54.664 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:54.788 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:54.864 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:54.925 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:54.926 -08 000000052 INF: Y Motor: Unshifted Position: 5956174
17-02-28 20:52:54.926 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:52:54.926 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:54.988 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:52:54.988 -08 000000052 INF: Y Motor: Moved to 64.5617 after 2369 ms
17-02-28 20:52:54.988 -08 000000052 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:52:55.052 -08 000000052 INF: Y Motor: Recv v 4096\r
17-02-28 20:52:55.052 -08 000000052 INF: Y Motor: Status After move finished OK:
17-02-28 20:52:55.052 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:55.113 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:52:55.113 -08 000000052 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:55.113 -08 000000052 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:52:55.175 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:55.179 -08 000000052 INF: Y Motor: Recv v 402653184\r
17-02-28 20:52:55.179 -08 000000052 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:52:55.179 -08 000000052 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:52:55.179 -08 000000052 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:52:55.237 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:55.238 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:52:55.238 -08 000000052 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:52:55.238 -08 000000052 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:52:55.238 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:55.300 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:52:55.300 -08 000000052 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:52:55.300 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:55.363 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:52:55.363 -08 000000052 INF: ======================================
17-02-28 20:52:55.364 -08 000000070 INF: ===================Move X,Y===================
17-02-28 20:52:55.365 -08 000000070 INF: ======================================
17-02-28 20:52:55.366 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:52:55.367 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:55.367 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:52:55.367 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:52:55.425 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:52:55.425 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:52:55.484 -08 000000122 INF: FPGA: Recv ZFREQCL
17-02-28 20:52:55.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:52:55.485 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:55.485 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:52:55.490 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:55.546 -08 000000094 INF: FPGA: Recv TDIYERD 6456172
17-02-28 20:52:55.546 -08 000000042 INF: Before scan, Y encoder from FPGA = 6456172 counts (64.562 mm)
17-02-28 20:52:55.546 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:55.547 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:55.547 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:55.548 -08 000000027 INF: ===================TDI FPGA Arm===================
17-02-28 20:52:55.548 -08 000000122 INF: ===================Set YMotor gains for scans===================
17-02-28 20:52:55.548 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:55.548 -08 000000122 INF: ======================================
17-02-28 20:52:55.549 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:52:55.549 -08 000000027 INF: FPGA: Xmit TDIYPOS 6345246\n
17-02-28 20:52:55.611 -08 000000118 INF: FPGA: Recv TDIYPOS
17-02-28 20:52:55.612 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:55.613 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:52:55.613 -08 000000027 INF: FPGA: Xmit TDIYARM3 139264 6436171 1 1\n
17-02-28 20:52:55.673 -08 000000072 INF: FPGA: Recv TDIYARM3
17-02-28 20:52:55.674 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:52:55.675 -08 000000027 INF: ===================TDI FPGA Arm===================
17-02-28 20:52:55.676 -08 000000027 INF: ======================================
17-02-28 20:52:55.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:52:55.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:52:55.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:55.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:55.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:55.680 -08 000000080 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:52:55.680 -08 000000124 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:52:55.680 -08 000000080 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:52:55.680 -08 000000080 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:52:55.680 -08 000000080 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:52:55.681 -08 000000124 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:52:55.681 -08 000000124 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:52:55.681 -08 000000124 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:52:55.681 -08 000000080 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:52:55.682 -08 000000124 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:52:55.797 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:55.870 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:56.045 -08 000000070 INF: FPGA: Recv EX1MV
17-02-28 20:52:56.045 -08 000000080 INF: Excitation Filter 1: Moved -107 steps in 364.3589 ms
17-02-28 20:52:56.045 -08 000000080 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.517 ms
17-02-28 20:52:56.045 -08 000000080 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 364.5888 ms
17-02-28 20:52:56.045 -08 000000080 INF: ======================================
17-02-28 20:52:56.109 -08 000000031 INF: FPGA: Recv EX2MV
17-02-28 20:52:56.109 -08 000000124 INF: Excitation Filter 2: Moved -107 steps in 428.3963 ms
17-02-28 20:52:56.109 -08 000000124 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 428.5263 ms
17-02-28 20:52:56.109 -08 000000124 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 428.7001 ms
17-02-28 20:52:56.110 -08 000000124 INF: ======================================
17-02-28 20:52:56.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:56.112 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:52:56.113 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:52:56.113 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:52:56.113 -08 000000126 INF: ===================FPGA Z Wait===================
17-02-28 20:52:56.113 -08 000000129 INF: ===================Move Y Motor without settling===================
17-02-28 20:52:56.113 -08 000000126 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:52:56.113 -08 000000129 INF: Y Motor: Moving to 14.9134 mm @6.500 mm/sec, started at 64.5617 mm
17-02-28 20:52:56.113 -08 000000129 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:52:56.114 -08 000000129 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:52:56.114 -08 000000064 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:52:56.114 -08 000000064 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:52:56.114 -08 000000070 INF: ===================Camera TDI, Parallel===================
17-02-28 20:52:56.115 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:52:56.115 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:52:56.116 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:56.116 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:56.117 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:56.117 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:56.120 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:56.172 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:56.172 -08 000000129 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:52:56.172 -08 000000129 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:52:56.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:56.237 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:56.237 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:52:56.267 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:56.267 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:56.267 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:56.267 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:56.299 -08 000000129 INF: Y Motor: Recv v 0\r
17-02-28 20:52:56.299 -08 000000129 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:52:56.299 -08 000000129 INF: Y Motor: Set target position to 991338 encoder counts
17-02-28 20:52:56.299 -08 000000129 INF: Y Motor: Xmit s r0xca 991338\r
17-02-28 20:52:56.366 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:56.366 -08 000000129 INF: Y Motor: Start the move command
17-02-28 20:52:56.366 -08 000000129 INF: Y Motor: Xmit t 1\r
17-02-28 20:52:56.417 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:56.417 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:56.417 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:52:56.417 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:52:56.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:56.423 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:52:56.423 -08 000000129 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:52:56.423 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:56.484 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:52:56.484 -08 000000126 INF: ======================================
17-02-28 20:52:56.485 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:56.550 -08 000000129 INF: Y Motor: Unshifted Position: 5897787
17-02-28 20:52:56.568 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:52:56.568 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:52:56.568 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:52:56.568 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:52:56.568 -08 000000038 INF: ===================Camera #0 Frame #4===================
17-02-28 20:52:56.568 -08 000000032 INF: ===================Camera #2 Frame #4===================
17-02-28 20:52:56.600 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:56.723 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:56.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:56.735 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:52:56.735 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:52:56.735 -08 000000032 INF: ===================Camera #2 Frame #11===================
17-02-28 20:52:56.736 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:52:56.736 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:52:56.736 -08 000000038 INF: ===================Camera #0 Frame #11===================
17-02-28 20:52:56.796 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:56.862 -08 000000129 INF: Y Motor: Unshifted Position: 5695416
17-02-28 20:52:56.907 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:52:56.907 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:52:56.907 -08 000000038 INF: ===================Camera #0 Frame #17===================
17-02-28 20:52:56.912 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:56.916 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:52:56.916 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:52:56.916 -08 000000032 INF: ===================Camera #2 Frame #17===================
17-02-28 20:52:57.037 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:57.046 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:57.077 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:52:57.077 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:52:57.077 -08 000000038 INF: ===================Camera #0 Frame #23===================
17-02-28 20:52:57.086 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:52:57.086 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:52:57.086 -08 000000032 INF: ===================Camera #2 Frame #23===================
17-02-28 20:52:57.109 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:57.172 -08 000000129 INF: Y Motor: Unshifted Position: 5491759
17-02-28 20:52:57.222 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:57.247 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:52:57.247 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:52:57.247 -08 000000038 INF: ===================Camera #0 Frame #29===================
17-02-28 20:52:57.256 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:52:57.256 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:52:57.256 -08 000000032 INF: ===================Camera #2 Frame #30===================
17-02-28 20:52:57.348 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:57.359 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:57.418 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:52:57.418 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:52:57.418 -08 000000038 INF: ===================Camera #0 Frame #36===================
17-02-28 20:52:57.421 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:57.429 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:52:57.429 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:52:57.429 -08 000000032 INF: ===================Camera #2 Frame #36===================
17-02-28 20:52:57.484 -08 000000129 INF: Y Motor: Unshifted Position: 5288957
17-02-28 20:52:57.534 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:57.589 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:52:57.589 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:52:57.589 -08 000000038 INF: ===================Camera #0 Frame #42===================
17-02-28 20:52:57.598 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:52:57.598 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:52:57.598 -08 000000032 INF: ===================Camera #2 Frame #42===================
17-02-28 20:52:57.656 -08 000000097 INF: RunCopyService queue size at 2/28/2017 8:52:57 PM is 15
17-02-28 20:52:57.658 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:57.671 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:57.734 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:57.757 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:52:57.757 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:52:57.757 -08 000000038 INF: ===================Camera #0 Frame #48===================
17-02-28 20:52:57.768 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:52:57.768 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:52:57.768 -08 000000032 INF: ===================Camera #2 Frame #49===================
17-02-28 20:52:57.797 -08 000000129 INF: Y Motor: Unshifted Position: 5085286
17-02-28 20:52:57.847 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:57.925 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:52:57.925 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:52:57.925 -08 000000038 INF: ===================Camera #0 Frame #54===================
17-02-28 20:52:57.940 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:52:57.940 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:52:57.940 -08 000000032 INF: ===================Camera #2 Frame #55===================
17-02-28 20:52:57.970 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:57.984 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:58.046 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:58.094 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:52:58.094 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:52:58.094 -08 000000038 INF: ===================Camera #0 Frame #61===================
17-02-28 20:52:58.110 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:52:58.110 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:52:58.110 -08 000000032 INF: ===================Camera #2 Frame #61===================
17-02-28 20:52:58.111 -08 000000129 INF: Y Motor: Unshifted Position: 4882485
17-02-28 20:52:58.161 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:58.266 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:52:58.266 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:52:58.266 -08 000000038 INF: ===================Camera #0 Frame #67===================
17-02-28 20:52:58.279 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:52:58.279 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:52:58.279 -08 000000032 INF: ===================Camera #2 Frame #67===================
17-02-28 20:52:58.283 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:58.296 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:58.358 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:58.419 -08 000000129 INF: Y Motor: Unshifted Position: 4678817
17-02-28 20:52:58.435 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:52:58.435 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:52:58.435 -08 000000038 INF: ===================Camera #0 Frame #73===================
17-02-28 20:52:58.448 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:52:58.448 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:52:58.448 -08 000000032 INF: ===================Camera #2 Frame #74===================
17-02-28 20:52:58.469 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:58.595 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:58.603 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:52:58.603 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:52:58.603 -08 000000038 INF: ===================Camera #0 Frame #79===================
17-02-28 20:52:58.608 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:58.620 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:52:58.620 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:52:58.620 -08 000000032 INF: ===================Camera #2 Frame #80===================
17-02-28 20:52:58.669 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:58.733 -08 000000129 INF: Y Motor: Unshifted Position: 4477959
17-02-28 20:52:58.771 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:52:58.771 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:52:58.771 -08 000000038 INF: ===================Camera #0 Frame #85===================
17-02-28 20:52:58.783 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:58.789 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:52:58.789 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:52:58.789 -08 000000032 INF: ===================Camera #2 Frame #86===================
17-02-28 20:52:58.908 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:58.919 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:58.939 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:52:58.939 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:52:58.939 -08 000000038 INF: ===================Camera #0 Frame #92===================
17-02-28 20:52:58.958 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:52:58.958 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:52:58.958 -08 000000032 INF: ===================Camera #2 Frame #92===================
17-02-28 20:52:58.982 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:59.045 -08 000000129 INF: Y Motor: Unshifted Position: 4272348
17-02-28 20:52:59.095 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:59.110 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:52:59.110 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:52:59.110 -08 000000038 INF: ===================Camera #0 Frame #98===================
17-02-28 20:52:59.127 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:52:59.127 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:52:59.127 -08 000000032 INF: ===================Camera #2 Frame #99===================
17-02-28 20:52:59.219 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:59.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:59.278 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:52:59.278 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:52:59.278 -08 000000038 INF: ===================Camera #0 Frame #104===================
17-02-28 20:52:59.293 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:59.299 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:52:59.299 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:52:59.299 -08 000000032 INF: ===================Camera #2 Frame #105===================
17-02-28 20:52:59.356 -08 000000129 INF: Y Motor: Unshifted Position: 4071489
17-02-28 20:52:59.406 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:59.446 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:52:59.446 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:52:59.446 -08 000000038 INF: ===================Camera #0 Frame #110===================
17-02-28 20:52:59.468 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:52:59.468 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:52:59.468 -08 000000032 INF: ===================Camera #2 Frame #111===================
17-02-28 20:52:59.532 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:59.543 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:59.605 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:59.614 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:52:59.614 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:52:59.614 -08 000000038 INF: ===================Camera #0 Frame #117===================
17-02-28 20:52:59.637 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:52:59.637 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:52:59.637 -08 000000032 INF: ===================Camera #2 Frame #117===================
17-02-28 20:52:59.668 -08 000000129 INF: Y Motor: Unshifted Position: 3868472
17-02-28 20:52:59.718 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:59.785 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:52:59.785 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:52:59.785 -08 000000038 INF: ===================Camera #0 Frame #123===================
17-02-28 20:52:59.806 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:52:59.806 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:52:59.806 -08 000000032 INF: ===================Camera #2 Frame #124===================
17-02-28 20:52:59.842 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:52:59.855 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:52:59.917 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:52:59.953 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:52:59.953 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:52:59.953 -08 000000038 INF: ===================Camera #0 Frame #129===================
17-02-28 20:52:59.979 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:52:59.979 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:52:59.979 -08 000000032 INF: ===================Camera #2 Frame #130===================
17-02-28 20:52:59.980 -08 000000129 INF: Y Motor: Unshifted Position: 3665669
17-02-28 20:53:00.030 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:00.121 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:53:00.121 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:53:00.121 -08 000000038 INF: ===================Camera #0 Frame #135===================
17-02-28 20:53:00.148 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:53:00.148 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:53:00.148 -08 000000032 INF: ===================Camera #2 Frame #136===================
17-02-28 20:53:00.156 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:00.167 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:00.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:00.289 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141.
17-02-28 20:53:00.289 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141
17-02-28 20:53:00.289 -08 000000038 INF: ===================Camera #0 Frame #141===================
17-02-28 20:53:00.292 -08 000000129 INF: Y Motor: Unshifted Position: 3462875
17-02-28 20:53:00.317 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:53:00.317 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:53:00.317 -08 000000032 INF: ===================Camera #2 Frame #142===================
17-02-28 20:53:00.342 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:00.457 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:53:00.457 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:53:00.457 -08 000000038 INF: ===================Camera #0 Frame #148===================
17-02-28 20:53:00.466 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:00.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:00.486 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:53:00.486 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:53:00.486 -08 000000032 INF: ===================Camera #2 Frame #149===================
17-02-28 20:53:00.541 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:00.603 -08 000000129 INF: Y Motor: Unshifted Position: 3259860
17-02-28 20:53:00.628 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:53:00.628 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:53:00.628 -08 000000038 INF: ===================Camera #0 Frame #154===================
17-02-28 20:53:00.653 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:00.658 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:53:00.658 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:53:00.658 -08 000000032 INF: ===================Camera #2 Frame #155===================
17-02-28 20:53:00.782 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:00.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:00.798 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:53:00.798 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:53:00.798 -08 000000038 INF: ===================Camera #0 Frame #160===================
17-02-28 20:53:00.829 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:53:00.829 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:53:00.829 -08 000000032 INF: ===================Camera #2 Frame #161===================
17-02-28 20:53:00.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:00.917 -08 000000129 INF: Y Motor: Unshifted Position: 3056194
17-02-28 20:53:00.967 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:00.968 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166.
17-02-28 20:53:00.968 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166
17-02-28 20:53:00.968 -08 000000038 INF: ===================Camera #0 Frame #166===================
17-02-28 20:53:01.000 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:53:01.000 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:53:01.000 -08 000000032 INF: ===================Camera #2 Frame #168===================
17-02-28 20:53:01.090 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:01.104 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:01.138 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:53:01.138 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:53:01.138 -08 000000038 INF: ===================Camera #0 Frame #173===================
17-02-28 20:53:01.165 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:01.174 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:53:01.174 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:53:01.174 -08 000000032 INF: ===================Camera #2 Frame #174===================
17-02-28 20:53:01.228 -08 000000129 INF: Y Motor: Unshifted Position: 2854052
17-02-28 20:53:01.278 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:01.311 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:53:01.311 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:53:01.311 -08 000000038 INF: ===================Camera #0 Frame #179===================
17-02-28 20:53:01.345 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:53:01.345 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:53:01.345 -08 000000032 INF: ===================Camera #2 Frame #180===================
17-02-28 20:53:01.405 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:01.415 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:01.478 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:01.480 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:53:01.480 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:53:01.480 -08 000000038 INF: ===================Camera #0 Frame #185===================
17-02-28 20:53:01.515 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:53:01.515 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:53:01.515 -08 000000032 INF: ===================Camera #2 Frame #187===================
17-02-28 20:53:01.540 -08 000000129 INF: Y Motor: Unshifted Position: 2651039
17-02-28 20:53:01.590 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:01.650 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191.
17-02-28 20:53:01.650 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191
17-02-28 20:53:01.650 -08 000000038 INF: ===================Camera #0 Frame #191===================
17-02-28 20:53:01.689 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:53:01.689 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:53:01.689 -08 000000032 INF: ===================Camera #2 Frame #193===================
17-02-28 20:53:01.717 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:01.728 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:01.789 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:01.819 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:53:01.819 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:53:01.819 -08 000000038 INF: ===================Camera #0 Frame #198===================
17-02-28 20:53:01.852 -08 000000129 INF: Y Motor: Unshifted Position: 2448024
17-02-28 20:53:01.860 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:53:01.860 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:53:01.860 -08 000000032 INF: ===================Camera #2 Frame #199===================
17-02-28 20:53:01.902 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:01.992 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:53:01.992 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:53:01.992 -08 000000038 INF: ===================Camera #0 Frame #204===================
17-02-28 20:53:02.026 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:02.031 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:53:02.031 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:53:02.031 -08 000000032 INF: ===================Camera #2 Frame #206===================
17-02-28 20:53:02.039 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:02.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:02.162 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:53:02.162 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:53:02.162 -08 000000038 INF: ===================Camera #0 Frame #210===================
17-02-28 20:53:02.166 -08 000000129 INF: Y Motor: Unshifted Position: 2245220
17-02-28 20:53:02.205 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:53:02.205 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:53:02.205 -08 000000032 INF: ===================Camera #2 Frame #212===================
17-02-28 20:53:02.216 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:02.330 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:53:02.330 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:53:02.330 -08 000000038 INF: ===================Camera #0 Frame #217===================
17-02-28 20:53:02.340 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:02.351 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:02.375 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:53:02.375 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:53:02.375 -08 000000032 INF: ===================Camera #2 Frame #218===================
17-02-28 20:53:02.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:02.478 -08 000000129 INF: Y Motor: Unshifted Position: 2042211
17-02-28 20:53:02.503 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:53:02.503 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:53:02.503 -08 000000038 INF: ===================Camera #0 Frame #223===================
17-02-28 20:53:02.528 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:02.546 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:53:02.546 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:53:02.546 -08 000000032 INF: ===================Camera #2 Frame #224===================
17-02-28 20:53:02.650 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:02.664 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:02.673 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:53:02.673 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:53:02.673 -08 000000038 INF: ===================Camera #0 Frame #229===================
17-02-28 20:53:02.717 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:53:02.717 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:53:02.717 -08 000000032 INF: ===================Camera #2 Frame #231===================
17-02-28 20:53:02.726 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:02.787 -08 000000129 INF: Y Motor: Unshifted Position: 1838750
17-02-28 20:53:02.837 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:02.843 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:53:02.843 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:53:02.843 -08 000000038 INF: ===================Camera #0 Frame #235===================
17-02-28 20:53:02.891 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:53:02.891 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:53:02.891 -08 000000032 INF: ===================Camera #2 Frame #237===================
17-02-28 20:53:02.963 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:02.976 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:03.013 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:53:03.013 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:53:03.013 -08 000000038 INF: ===================Camera #0 Frame #242===================
17-02-28 20:53:03.036 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:03.062 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:53:03.062 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:53:03.062 -08 000000032 INF: ===================Camera #2 Frame #243===================
17-02-28 20:53:03.101 -08 000000129 INF: Y Motor: Unshifted Position: 1637250
17-02-28 20:53:03.151 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:03.186 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:53:03.186 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:53:03.186 -08 000000038 INF: ===================Camera #0 Frame #248===================
17-02-28 20:53:03.233 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:53:03.233 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:53:03.233 -08 000000032 INF: ===================Camera #2 Frame #250===================
17-02-28 20:53:03.276 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:03.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:03.350 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:03.355 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254.
17-02-28 20:53:03.355 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254
17-02-28 20:53:03.355 -08 000000038 INF: ===================Camera #0 Frame #254===================
17-02-28 20:53:03.407 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:53:03.407 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:53:03.407 -08 000000032 INF: ===================Camera #2 Frame #256===================
17-02-28 20:53:03.413 -08 000000129 INF: Y Motor: Unshifted Position: 1432930
17-02-28 20:53:03.463 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:03.525 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:53:03.525 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:53:03.525 -08 000000038 INF: ===================Camera #0 Frame #261===================
17-02-28 20:53:03.577 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:53:03.577 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:53:03.577 -08 000000032 INF: ===================Camera #2 Frame #262===================
17-02-28 20:53:03.586 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:03.600 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:03.661 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:03.698 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:53:03.698 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:53:03.698 -08 000000038 INF: ===================Camera #0 Frame #267===================
17-02-28 20:53:03.724 -08 000000129 INF: Y Motor: Unshifted Position: 1230544
17-02-28 20:53:03.748 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:53:03.748 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:53:03.748 -08 000000032 INF: ===================Camera #2 Frame #269===================
17-02-28 20:53:03.774 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:03.848 -08 000000063 INF: FPGA: Recv TDIYWAIT
17-02-28 20:53:03.848 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:03.850 -08 000000064 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:53:03.851 -08 000000052 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:53:03.851 -08 000000059 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:53:03.851 -08 000000052 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:53:03.851 -08 000000052 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:53:03.851 -08 000000052 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:53:03.851 -08 000000052 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:53:03.851 -08 000000059 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:53:03.851 -08 000000059 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:53:03.851 -08 000000059 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:53:03.852 -08 000000059 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:53:03.867 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:03.867 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:03.867 -08 000000038 INF: ===================Camera #0 Frame #272===================
17-02-28 20:53:03.883 -08 000000038 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:03.884 -08 000000038 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:03.900 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:03.911 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:03.972 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:04.035 -08 000000129 INF: Y Motor: Unshifted Position: 1028408
17-02-28 20:53:04.049 -08 000000038 INF: Camera #0 ReleaseBuffer
17-02-28 20:53:04.049 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:04.049 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:04.049 -08 000000032 INF: ===================Camera #2 Frame #272===================
17-02-28 20:53:04.049 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:53:04.059 -08 000000032 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:04.060 -08 000000032 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:04.079 -08 000000038 INF: ======================================
17-02-28 20:53:04.085 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:04.222 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:04.222 -08 000000119 INF: FPGA: Recv EX1MV
17-02-28 20:53:04.222 -08 000000119 INF: FPGA: Recv EX2MV
17-02-28 20:53:04.223 -08 000000059 INF: Excitation Filter 2: Moved 107 steps in 371.5044 ms
17-02-28 20:53:04.223 -08 000000052 INF: Excitation Filter 1: Moved 107 steps in 371.7344 ms
17-02-28 20:53:04.223 -08 000000052 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8226 ms
17-02-28 20:53:04.223 -08 000000052 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.8926 ms
17-02-28 20:53:04.223 -08 000000059 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.6109 ms
17-02-28 20:53:04.223 -08 000000059 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.0226 ms
17-02-28 20:53:04.223 -08 000000052 INF: ======================================
17-02-28 20:53:04.223 -08 000000059 INF: ======================================
17-02-28 20:53:04.224 -08 000000129 INF: Y Motor: Unshifted Position: 991338
17-02-28 20:53:04.224 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:04.224 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:04.224 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:04.225 -08 000000064 INF: ======================================
17-02-28 20:53:04.258 -08 000000032 INF: Camera #2 ReleaseBuffer
17-02-28 20:53:04.258 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:53:04.287 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:04.288 -08 000000129 INF: Y Motor: Recv v 0\r
17-02-28 20:53:04.288 -08 000000129 INF: Y Motor: Moved to 14.9134 after 7865 ms
17-02-28 20:53:04.288 -08 000000129 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:04.292 -08 000000032 INF: ======================================
17-02-28 20:53:04.294 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:53:04.295 -08 000000070 INF: ======================================
17-02-28 20:53:04.349 -08 000000129 INF: Y Motor: Recv v 4097\r
17-02-28 20:53:04.349 -08 000000129 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:04.349 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:04.412 -08 000000129 INF: Y Motor: Recv v 0\r
17-02-28 20:53:04.412 -08 000000129 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:04.412 -08 000000129 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:04.474 -08 000000129 INF: Y Motor: Recv v 134217728\r
17-02-28 20:53:04.474 -08 000000129 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:53:04.474 -08 000000129 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:04.474 -08 000000129 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:04.536 -08 000000129 INF: Y Motor: Recv v 0\r
17-02-28 20:53:04.536 -08 000000129 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:04.536 -08 000000129 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:04.536 -08 000000129 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:04.537 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:04.597 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:04.598 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:53:04.598 -08 000000129 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:04.598 -08 000000129 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:04.659 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:53:04.659 -08 000000129 INF: ======================================
17-02-28 20:53:04.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:04.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:04.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:04.662 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:53:04.722 -08 000000059 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:53:04.722 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:04.784 -08 000000031 INF: FPGA: Recv TDIYERD 1491339
17-02-28 20:53:04.784 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:53:04.844 -08 000000064 INF: FPGA: Recv ZADCR 34199
17-02-28 20:53:04.844 -08 000000042 INF: At scan end Y pos = 14.913 and Z pos = -0.131. Y moved -48.539 mm
17-02-28 20:53:04.844 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:53:04.847 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:04.910 -08 000000097 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:53:04.910 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:53:04.910 -08 000000042 INF: TDIScan finished after 12646.5903 ms
17-02-28 20:53:04.910 -08 000000042 INF: Image[0]: Y should trigger at 63.452 mm, 2nd row was at 64.361 mm (error = 0.909 mm)
17-02-28 20:53:04.910 -08 000000042 INF: Image[2]: Y should trigger at 63.452 mm, 2nd row was at 64.361 mm (error = 0.909 mm)
17-02-28 20:53:04.911 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:04.912 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:04.944 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.597 um
17-02-28 20:53:04.945 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:04.945 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:53:04.969 -08 000000059 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:53:04.970 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:04.970 -08 000000027 INF: ===================Dither Clean Up Command===================
17-02-28 20:53:04.970 -08 000000036 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:53:04.970 -08 000000032 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:53:04.971 -08 000000029 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:53:04.971 -08 000000032 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:53:04.971 -08 000000032 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:53:04.971 -08 000000036 INF: ======================================
17-02-28 20:53:04.971 -08 000000029 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:53:04.971 -08 000000029 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:53:04.971 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:04.971 -08 000000097 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:04.972 -08 000000051 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:53:04.974 -08 000000097 INF: ===================LFT:Extracting coords===================
17-02-28 20:53:05.000 -08 000000097 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:05.001 -08 000000097 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:53:05.001 -08 000000061 INF: ===================LookupFocusTracking===================
17-02-28 20:53:05.001 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:53:05.002 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:53:05.002 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:53:05.002 -08 000000061 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:05.002 -08 000000095 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:05.002 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:05.002 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:05.031 -08 000000031 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:05.031 -08 000000031 INF: FPGA: Recv ZSEL 
17-02-28 20:53:05.031 -08 000000051 INF: FPGA: Xmit ZDACW 40027\n
17-02-28 20:53:05.031 -08 000000029 INF: ======================================
17-02-28 20:53:05.035 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:53:05.035 -08 000000032 INF: ======================================
17-02-28 20:53:05.076 -08 000000061 INF: FC:B, C:5,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:05.076 -08 000000095 INF: FC:B, C:5,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:05.076 -08 000000038 INF: FC:B, C:5,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:05.076 -08 000000087 INF: FC:B, C:5,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:05.096 -08 000000055 INF: FPGA: Recv ZDACW 
17-02-28 20:53:05.097 -08 000000051 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:53:05.097 -08 000000051 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:53:05.158 -08 000000072 INF: FPGA: Recv TDIBB
17-02-28 20:53:05.158 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:05.159 -08 000000051 INF: ======================================
17-02-28 20:53:05.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:05.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:05.227 -08 000000095 INF: LFT found best fwhm score 2.002474 in 151 ms
17-02-28 20:53:05.227 -08 000000095 INF: LFT found good score at index 217 with fwhm value 2.002474. Next cycle, cycle 6 starting Z position for top surface is at -0.153 mm FC:B, C:5,L:2,T
17-02-28 20:53:05.227 -08 000000061 INF: LFT found best fwhm score 2.000019 in 151 ms
17-02-28 20:53:05.227 -08 000000061 INF: LFT found good score at index 8985 with fwhm value 2.000019. Next cycle, cycle 6 starting Z position for top surface is at -0.152 mm FC:B, C:5,L:2,T
17-02-28 20:53:05.228 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:53:05.228 -08 000000061 INF: ===================LookupFocusTracking===================
17-02-28 20:53:05.228 -08 000000038 INF: LFT found best fwhm score 2.000129 in 152 ms
17-02-28 20:53:05.228 -08 000000038 INF: LFT found good score at index 8205 with fwhm value 2.000129. Next cycle, cycle 6 starting Z position for top surface is at -0.152 mm FC:B, C:5,L:2,T
17-02-28 20:53:05.228 -08 000000087 INF: LFT found best fwhm score 2.123098 in 152 ms
17-02-28 20:53:05.228 -08 000000095 INF: ======================================
17-02-28 20:53:05.228 -08 000000087 INF: LFT found good score at index 2513 with fwhm value 2.123098. Next cycle, cycle 6 starting Z position for top surface is at -0.153 mm FC:B, C:5,L:2,T
17-02-28 20:53:05.228 -08 000000061 INF: ======================================
17-02-28 20:53:05.228 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:53:05.228 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:53:05.228 -08 000000087 INF: ======================================
17-02-28 20:53:05.229 -08 000000038 INF: ======================================
17-02-28 20:53:05.229 -08 000000097 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:05.230 -08 000000097 INF: LFT weighted average best Z for top surface is at -0.152mm FC:B, C:5,L:2,T
17-02-28 20:53:05.230 -08 000000097 INF: ======================================
17-02-28 20:53:05.232 -08 000000027 INF: ======================================
17-02-28 20:53:05.233 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:05.233 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:53:05.233 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:05.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:53:05.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:05.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:53:05.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:05.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:53:05.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:05.235 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:53:05.235 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:53:05.236 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:53:05.236 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:53:05.236 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:53:05.236 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:53:05.259 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:53:05.259 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:53:05.259 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:05.259 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:53:05.260 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:53:05.260 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:53:05.260 -08 000000042 INF: Transformed XStagePosition from 72.50464 mm to 72.4804886709899 mm.
17-02-28 20:53:05.305 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.561024355121 mm.
17-02-28 20:53:05.305 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.361024355121 mm.
17-02-28 20:53:05.305 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.451774355121 mm.
17-02-28 20:53:05.307 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:05.308 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:53:05.308 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:05.308 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -152.7 um, section = B_1
17-02-28 20:53:05.309 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:05.310 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:05.330 -08 000000040 INF: ===================MoveEmissionFilters===================
17-02-28 20:53:05.334 -08 000000072 INF: ===================Move X,Y===================
17-02-28 20:53:05.335 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1104 Request: {"Cycle":5,"Lane":2,"Tile":1104,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF180","HCSMMF263","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.335 -08 000000027 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:05.335 -08 000000072 INF: ===================Move X,Y, Parallel===================
17-02-28 20:53:05.336 -08 000000027 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:53:05.336 -08 000000093 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:05.336 -08 000000126 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:05.336 -08 000000027 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:53:05.337 -08 000000027 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:05.337 -08 000000093 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:05.337 -08 000000126 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:05.338 -08 000000080 INF: ===================Move X Motor without settling===================
17-02-28 20:53:05.338 -08 000000080 INF: X Motor: Xmit PR VM\n
17-02-28 20:53:05.339 -08 000000027 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:53:05.339 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:05.340 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:05.341 -08 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:53:05.341 -08 000000032 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:05.341 -08 000000032 INF: Y Motor: Moving to 64.5610 mm @25.000 mm/sec, started at 14.9134 mm
17-02-28 20:53:05.341 -08 000000029 INF: ======================================
17-02-28 20:53:05.341 -08 000000032 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:05.341 -08 000000032 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:05.342 -08 000000031 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:53:05.343 -08 000000031 INF: ======================================
17-02-28 20:53:05.343 -08 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:05.344 -08 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:05.344 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:53:05.344 -08 000000111 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:53:05.344 -08 000000038 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:53:05.344 -08 000000031 INF: ===================Camera Arm TDI===================
17-02-28 20:53:05.345 -08 000000061 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:53:05.345 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:05.345 -08 000000094 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:53:05.345 -08 000000061 INF: ======================================
17-02-28 20:53:05.345 -08 000000038 INF: ======================================
17-02-28 20:53:05.345 -08 000000031 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:05.345 -08 000000094 INF: ======================================
17-02-28 20:53:05.346 -08 000000070 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:05.346 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:05.346 -08 000000070 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:53:05.346 -08 000000031 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:05.346 -08 000000093 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:05.347 -08 000000120 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:53:05.347 -08 000000120 INF: ======================================
17-02-28 20:53:05.347 -08 000000111 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:53:05.347 -08 000000093 INF: ======================================
17-02-28 20:53:05.348 -08 000000111 INF: ======================================
17-02-28 20:53:05.350 -08 000000126 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:05.351 -08 000000126 INF: ======================================
17-02-28 20:53:05.354 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:05.356 -08 000000064 INF: ======================================
17-02-28 20:53:05.359 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:53:05.360 -08 000000089 INF: ======================================
17-02-28 20:53:05.361 -08 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:05.363 -08 000000029 INF: ======================================
17-02-28 20:53:05.364 -08 000000040 INF: ======================================
17-02-28 20:53:05.406 -08 000000077 INF: FPGA: Recv ZSEL 
17-02-28 20:53:05.407 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1102 Request: {"Cycle":5,"Lane":2,"Tile":1102,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF207","HCSMMF238","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.407 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:05.407 -08 000000070 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:53:05.408 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:53:05.408 -08 000000080 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:53:05.408 -08 000000032 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:05.408 -08 000000080 INF: X Motor: Xmit PR VI\n
17-02-28 20:53:05.408 -08 000000032 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:05.411 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1107 Request: {"Cycle":5,"Lane":2,"Tile":1107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF264","HCSMMF183","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.420 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1105 Request: {"Cycle":5,"Lane":2,"Tile":1105,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF265","HCSMMF223","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.430 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1101 Request: {"Cycle":5,"Lane":2,"Tile":1101,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF278","HCSMMF200","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.433 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1111 Request: {"Cycle":5,"Lane":2,"Tile":1111,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF185","HCSMMF234","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.436 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1103 Request: {"Cycle":5,"Lane":2,"Tile":1103,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF268","HCSMMF269","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.439 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1109 Request: {"Cycle":5,"Lane":2,"Tile":1109,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF224","HCSMMF255","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.446 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1106 Request: {"Cycle":5,"Lane":2,"Tile":1106,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF261","HCSMMF214","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.468 -08 000000094 INF: FPGA: Recv TDIBB
17-02-28 20:53:05.468 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:05.470 -08 000000080 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:53:05.470 -08 000000080 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:53:05.470 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:53:05.470 -08 000000070 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:05.470 -08 000000032 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:05.470 -08 000000080 INF: X Motor: Moving to 72.4805 mm @15.000 mm/sec, started at 71.3779 mm
17-02-28 20:53:05.470 -08 000000080 INF: X Motor: Xmit MA 5522\n
17-02-28 20:53:05.470 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:05.471 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:05.472 -08 000000070 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:53:05.472 -08 000000070 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:53:05.472 -08 000000070 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:53:05.481 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1114 Request: {"Cycle":5,"Lane":2,"Tile":1114,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF198","HCSMMF243","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.481 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1110 Request: {"Cycle":5,"Lane":2,"Tile":1110,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF182","HCSMMF187","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.482 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1115 Request: {"Cycle":5,"Lane":2,"Tile":1115,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF219","HCSMMF266","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.483 -08 000000122 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1113 Request: {"Cycle":5,"Lane":2,"Tile":1113,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF226","HCSMMF203","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.484 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1108 Request: {"Cycle":5,"Lane":2,"Tile":1108,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF287","HCSMMF189","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.485 -08 000000124 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1112 Request: {"Cycle":5,"Lane":2,"Tile":1112,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF205","HCSMMF256","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.487 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1117 Request: {"Cycle":5,"Lane":2,"Tile":1117,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF281","HCSMMF244","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.487 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1116 Request: {"Cycle":5,"Lane":2,"Tile":1116,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF193","HCSMMF212","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.488 -08 000000126 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1118 Request: {"Cycle":5,"Lane":2,"Tile":1118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF279","HCSMMF206","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.489 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1122 Request: {"Cycle":5,"Lane":2,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF222","HCSMMF184","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.490 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1121 Request: {"Cycle":5,"Lane":2,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF258","HCSMMF232","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.490 -08 000000120 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1123 Request: {"Cycle":5,"Lane":2,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF284","HCSMMF250","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.491 -08 000000119 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1120 Request: {"Cycle":5,"Lane":2,"Tile":1120,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF208","HCSMMF181","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.492 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1125 Request: {"Cycle":5,"Lane":2,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF247","HCSMMF227","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.493 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1128 Request: {"Cycle":5,"Lane":2,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF259","HCSMMF275","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.493 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1127 Request: {"Cycle":5,"Lane":2,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF213","HCSMMF248","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.495 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1126 Request: {"Cycle":5,"Lane":2,"Tile":1126,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF229","HCSMMF177","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.498 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1124 Request: {"Cycle":5,"Lane":2,"Tile":1124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF231","HCSMMF176","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.509 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1119 Request: {"Cycle":5,"Lane":2,"Tile":1119,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF277","HCSMMF197","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:05.533 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:05.533 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:05.534 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:05.535 -08 000000032 INF: Y Motor: Recv v 0\r
17-02-28 20:53:05.535 -08 000000032 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:05.535 -08 000000080 INF: X Motor: Recv MA 5522\r\n>
17-02-28 20:53:05.535 -08 000000070 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:53:05.535 -08 000000080 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:53:05.535 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:05.536 -08 000000032 INF: Y Motor: Set target position to 5956102 encoder counts
17-02-28 20:53:05.536 -08 000000032 INF: Y Motor: Xmit s r0xca 5956102\r
17-02-28 20:53:05.537 -08 000000070 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:53:05.537 -08 000000070 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:53:05.537 -08 000000070 INF: Z Motor: Arming to move to -0.1127 mm
17-02-28 20:53:05.537 -08 000000070 INF: FPGA: Xmit ZYT 6436102 4\n
17-02-28 20:53:05.574 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:05.580 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:53:05.597 -08 000000059 INF: FPGA: Recv ZYT 
17-02-28 20:53:05.598 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:53:05.598 -08 000000070 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1491338 enc / 14.913 mm / ) = 6436102 enc / 64.361 mm
17-02-28 20:53:05.598 -08 000000070 INF: FPGA: Xmit ZARM 29541\n
17-02-28 20:53:05.598 -08 000000032 INF: Y Motor: Start the move command
17-02-28 20:53:05.598 -08 000000032 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:05.657 -08 000000111 INF: FPGA: Recv ZARM
17-02-28 20:53:05.657 -08 000000070 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.3402 ms
17-02-28 20:53:05.657 -08 000000070 INF: Z Motor: ArmAbsStepped took 120.0204 ms
17-02-28 20:53:05.658 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:05.659 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:53:05.659 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:53:05.659 -08 000000032 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:53:05.659 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:05.660 -08 000000070 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:53:05.661 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:53:05.662 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:05.662 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:53:05.662 -08 000000070 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:53:05.663 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:53:05.664 -08 000000070 INF: ======================================
17-02-28 20:53:05.701 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:05.707 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:53:05.782 -08 000000032 INF: Y Motor: Unshifted Position: 1071556
17-02-28 20:53:05.784 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:05.832 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:05.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:05.848 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:05.853 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:53:05.937 -08 000000031 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:05.938 -08 000000031 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:05.938 -08 000000031 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:05.953 -08 000000031 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:05.953 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:05.955 -08 000000031 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:05.958 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:05.959 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:53:06.050 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:06.094 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:06.094 -08 000000032 INF: Y Motor: Unshifted Position: 1773005
17-02-28 20:53:06.144 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:06.158 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:06.159 -08 000000080 INF: X Motor: Xmit PR ER\n
17-02-28 20:53:06.222 -08 000000080 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:53:06.222 -08 000000080 INF: X Motor: Moved to 72.4814 after 687 ms
17-02-28 20:53:06.222 -08 000000080 INF: ======================================
17-02-28 20:53:06.271 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:06.337 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:53:06.408 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:06.408 -08 000000032 INF: Y Motor: Unshifted Position: 2553851
17-02-28 20:53:06.459 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:06.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:06.561 -08 000000031 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:06.561 -08 000000031 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:06.562 -08 000000031 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:06.577 -08 000000031 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:06.579 -08 000000031 INF: ===================Camera Arm TDI===================
17-02-28 20:53:06.580 -08 000000031 INF: ======================================
17-02-28 20:53:06.581 -08 000000027 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:06.582 -08 000000027 INF: ======================================
17-02-28 20:53:06.583 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:06.719 -08 000000032 INF: Y Motor: Unshifted Position: 3333803
17-02-28 20:53:06.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:06.769 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:06.784 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:06.896 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:07.031 -08 000000032 INF: Y Motor: Unshifted Position: 4117207
17-02-28 20:53:07.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:07.081 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:07.095 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:07.207 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:07.346 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:07.347 -08 000000032 INF: Y Motor: Unshifted Position: 4899636
17-02-28 20:53:07.397 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:07.406 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:07.520 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:07.655 -08 000000032 INF: Y Motor: Unshifted Position: 5693086
17-02-28 20:53:07.656 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:07.705 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:07.719 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:07.833 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:07.969 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:07.969 -08 000000032 INF: Y Motor: Unshifted Position: 5956104
17-02-28 20:53:07.969 -08 000000032 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:07.969 -08 000000032 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:08.029 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:08.032 -08 000000032 INF: Y Motor: Recv v 0\r
17-02-28 20:53:08.032 -08 000000032 INF: Y Motor: Moved to 64.5610 after 2372 ms
17-02-28 20:53:08.032 -08 000000032 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:08.092 -08 000000032 INF: Y Motor: Recv v 4096\r
17-02-28 20:53:08.092 -08 000000032 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:08.092 -08 000000032 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:08.156 -08 000000032 INF: Y Motor: Recv v 0\r
17-02-28 20:53:08.156 -08 000000032 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:08.156 -08 000000032 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:08.218 -08 000000032 INF: Y Motor: Recv v 402653184\r
17-02-28 20:53:08.218 -08 000000032 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:53:08.218 -08 000000032 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:08.218 -08 000000032 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:08.279 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:08.280 -08 000000032 INF: Y Motor: Recv v 0\r
17-02-28 20:53:08.280 -08 000000032 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:08.280 -08 000000032 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:08.280 -08 000000032 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:08.344 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:08.345 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:53:08.345 -08 000000032 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:08.345 -08 000000032 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:08.405 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:53:08.405 -08 000000032 INF: ======================================
17-02-28 20:53:08.406 -08 000000072 INF: ===================Move X,Y===================
17-02-28 20:53:08.407 -08 000000072 INF: ======================================
17-02-28 20:53:08.408 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:08.409 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:08.409 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:53:08.409 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:53:08.468 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:53:08.468 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:53:08.528 -08 000000094 INF: FPGA: Recv ZFREQCL
17-02-28 20:53:08.528 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:53:08.528 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:08.529 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:08.591 -08 000000119 INF: FPGA: Recv TDIYERD 6456103
17-02-28 20:53:08.591 -08 000000042 INF: Before scan, Y encoder from FPGA = 6456103 counts (64.561 mm)
17-02-28 20:53:08.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:08.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:08.593 -08 000000129 INF: ===================TDI FPGA Arm===================
17-02-28 20:53:08.593 -08 000000052 INF: ===================Set YMotor gains for scans===================
17-02-28 20:53:08.593 -08 000000052 INF: ======================================
17-02-28 20:53:08.593 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:08.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:08.594 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:53:08.594 -08 000000129 INF: FPGA: Xmit TDIYPOS 6345177\n
17-02-28 20:53:08.653 -08 000000096 INF: FPGA: Recv TDIYPOS
17-02-28 20:53:08.653 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:08.654 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:08.654 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:08.654 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:08.654 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:53:08.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left===================
17-02-28 20:53:08.655 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:53:08.655 -08 000000129 INF: FPGA: Xmit TDIYARM3 139264 6436102 1 1\n
17-02-28 20:53:08.715 -08 000000072 INF: FPGA: Recv TDIYARM3
17-02-28 20:53:08.716 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:08.717 -08 000000129 INF: ===================TDI FPGA Arm===================
17-02-28 20:53:08.718 -08 000000129 INF: ======================================
17-02-28 20:53:08.719 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:08.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:08.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:08.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:08.721 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:08.722 -08 000000059 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:53:08.722 -08 000000104 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:53:08.722 -08 000000059 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:53:08.722 -08 000000059 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:53:08.722 -08 000000059 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:53:08.722 -08 000000059 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:53:08.722 -08 000000104 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:53:08.722 -08 000000104 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:53:08.722 -08 000000104 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:53:08.723 -08 000000104 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:53:09.091 -08 000000055 INF: FPGA: Recv EX2MV
17-02-28 20:53:09.091 -08 000000055 INF: FPGA: Recv EX1MV
17-02-28 20:53:09.091 -08 000000059 INF: Excitation Filter 2: Moved -107 steps in 368.6908 ms
17-02-28 20:53:09.091 -08 000000059 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.806 ms
17-02-28 20:53:09.091 -08 000000059 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.8802 ms
17-02-28 20:53:09.091 -08 000000104 INF: Excitation Filter 1: Moved -107 steps in 368.5403 ms
17-02-28 20:53:09.091 -08 000000104 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.9466 ms
17-02-28 20:53:09.091 -08 000000104 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.0185 ms
17-02-28 20:53:09.091 -08 000000059 INF: ======================================
17-02-28 20:53:09.091 -08 000000104 INF: ======================================
17-02-28 20:53:09.092 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:09.093 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:09.094 -08 000000126 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:09.094 -08 000000027 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:09.095 -08 000000036 INF: ===================FPGA Z Wait===================
17-02-28 20:53:09.095 -08 000000036 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:53:09.095 -08 000000027 INF: Y Motor: Moving to 14.9127 mm @6.500 mm/sec, started at 64.5610 mm
17-02-28 20:53:09.095 -08 000000027 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:09.095 -08 000000027 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:09.095 -08 000000126 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:53:09.095 -08 000000096 INF: ===================Camera TDI===================
17-02-28 20:53:09.096 -08 000000126 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:53:09.096 -08 000000096 INF: ===================Camera TDI, Parallel===================
17-02-28 20:53:09.097 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:53:09.097 -08 000000029 INF: ===================Camera TDI===================
17-02-28 20:53:09.099 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:09.099 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:09.099 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:09.099 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:09.155 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:53:09.155 -08 000000027 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:09.155 -08 000000027 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:09.217 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:53:09.217 -08 000000027 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:09.249 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:09.249 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:09.249 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:09.249 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:09.281 -08 000000027 INF: Y Motor: Recv v 0\r
17-02-28 20:53:09.281 -08 000000027 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:09.281 -08 000000027 INF: Y Motor: Set target position to 991269 encoder counts
17-02-28 20:53:09.281 -08 000000027 INF: Y Motor: Xmit s r0xca 991269\r
17-02-28 20:53:09.341 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:53:09.341 -08 000000027 INF: Y Motor: Start the move command
17-02-28 20:53:09.341 -08 000000027 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:09.399 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:09.399 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:09.399 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:09.399 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:09.403 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:53:09.403 -08 000000027 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:53:09.403 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:09.463 -08 000000055 INF: FPGA: Recv ZWAIT 
17-02-28 20:53:09.463 -08 000000036 INF: ======================================
17-02-28 20:53:09.530 -08 000000027 INF: Y Motor: Unshifted Position: 5889911
17-02-28 20:53:09.549 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:53:09.549 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:53:09.549 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:53:09.549 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:53:09.549 -08 000000029 INF: ===================Camera #2 Frame #5===================
17-02-28 20:53:09.549 -08 000000087 INF: ===================Camera #0 Frame #5===================
17-02-28 20:53:09.580 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:09.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:09.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left===================
17-02-28 20:53:09.704 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:09.714 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:53:09.714 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:53:09.714 -08 000000087 INF: ===================Camera #0 Frame #11===================
17-02-28 20:53:09.715 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:53:09.715 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:53:09.715 -08 000000029 INF: ===================Camera #2 Frame #11===================
17-02-28 20:53:09.841 -08 000000027 INF: Y Motor: Unshifted Position: 5690150
17-02-28 20:53:09.882 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:53:09.882 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:53:09.882 -08 000000087 INF: ===================Camera #0 Frame #17===================
17-02-28 20:53:09.884 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:53:09.884 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:53:09.884 -08 000000029 INF: ===================Camera #2 Frame #17===================
17-02-28 20:53:09.891 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:10.015 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:10.051 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:53:10.051 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:53:10.051 -08 000000087 INF: ===================Camera #0 Frame #23===================
17-02-28 20:53:10.053 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:53:10.053 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:53:10.053 -08 000000029 INF: ===================Camera #2 Frame #23===================
17-02-28 20:53:10.151 -08 000000027 INF: Y Motor: Unshifted Position: 5488440
17-02-28 20:53:10.201 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:10.219 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:53:10.219 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:53:10.219 -08 000000087 INF: ===================Camera #0 Frame #29===================
17-02-28 20:53:10.231 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:53:10.231 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:53:10.231 -08 000000029 INF: ===================Camera #2 Frame #30===================
17-02-28 20:53:10.328 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:10.391 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:53:10.391 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:53:10.391 -08 000000087 INF: ===================Camera #0 Frame #36===================
17-02-28 20:53:10.405 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:53:10.405 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:53:10.405 -08 000000029 INF: ===================Camera #2 Frame #36===================
17-02-28 20:53:10.464 -08 000000027 INF: Y Motor: Unshifted Position: 5284985
17-02-28 20:53:10.514 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:10.564 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:53:10.564 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:53:10.564 -08 000000087 INF: ===================Camera #0 Frame #42===================
17-02-28 20:53:10.581 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:53:10.581 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:53:10.581 -08 000000029 INF: ===================Camera #2 Frame #43===================
17-02-28 20:53:10.638 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:10.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:10.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left===================
17-02-28 20:53:10.743 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:53:10.743 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:53:10.743 -08 000000087 INF: ===================Camera #0 Frame #49===================
17-02-28 20:53:10.756 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:53:10.756 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:53:10.756 -08 000000029 INF: ===================Camera #2 Frame #49===================
17-02-28 20:53:10.777 -08 000000027 INF: Y Motor: Unshifted Position: 5081316
17-02-28 20:53:10.827 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:10.914 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:53:10.914 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:53:10.914 -08 000000087 INF: ===================Camera #0 Frame #55===================
17-02-28 20:53:10.934 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:53:10.934 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:53:10.934 -08 000000029 INF: ===================Camera #2 Frame #56===================
17-02-28 20:53:10.951 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:11.082 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:53:11.082 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:53:11.082 -08 000000087 INF: ===================Camera #0 Frame #61===================
17-02-28 20:53:11.087 -08 000000027 INF: Y Motor: Unshifted Position: 4879596
17-02-28 20:53:11.106 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:53:11.106 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:53:11.106 -08 000000029 INF: ===================Camera #2 Frame #62===================
17-02-28 20:53:11.137 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:11.251 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:53:11.251 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:53:11.251 -08 000000087 INF: ===================Camera #0 Frame #67===================
17-02-28 20:53:11.262 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:11.285 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:53:11.285 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:53:11.285 -08 000000029 INF: ===================Camera #2 Frame #69===================
17-02-28 20:53:11.400 -08 000000027 INF: Y Motor: Unshifted Position: 4676797
17-02-28 20:53:11.440 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:53:11.440 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:53:11.440 -08 000000087 INF: ===================Camera #0 Frame #74===================
17-02-28 20:53:11.450 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:11.458 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:53:11.458 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:53:11.458 -08 000000029 INF: ===================Camera #2 Frame #75===================
17-02-28 20:53:11.576 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:11.612 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:53:11.612 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:53:11.612 -08 000000087 INF: ===================Camera #0 Frame #81===================
17-02-28 20:53:11.628 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:53:11.628 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:53:11.628 -08 000000029 INF: ===================Camera #2 Frame #81===================
17-02-28 20:53:11.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:11.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left===================
17-02-28 20:53:11.712 -08 000000027 INF: Y Motor: Unshifted Position: 4473123
17-02-28 20:53:11.762 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:11.784 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:53:11.784 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:53:11.784 -08 000000087 INF: ===================Camera #0 Frame #87===================
17-02-28 20:53:11.798 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:53:11.798 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:53:11.798 -08 000000029 INF: ===================Camera #2 Frame #87===================
17-02-28 20:53:11.887 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:11.952 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:53:11.952 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:53:11.952 -08 000000087 INF: ===================Camera #0 Frame #93===================
17-02-28 20:53:11.969 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:53:11.969 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:53:11.969 -08 000000029 INF: ===================Camera #2 Frame #94===================
17-02-28 20:53:12.025 -08 000000027 INF: Y Motor: Unshifted Position: 4269673
17-02-28 20:53:12.075 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:12.120 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:53:12.120 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:53:12.120 -08 000000087 INF: ===================Camera #0 Frame #99===================
17-02-28 20:53:12.144 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:53:12.144 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:53:12.144 -08 000000029 INF: ===================Camera #2 Frame #100===================
17-02-28 20:53:12.199 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:12.288 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:53:12.288 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:53:12.288 -08 000000087 INF: ===================Camera #0 Frame #105===================
17-02-28 20:53:12.315 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:53:12.315 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:53:12.315 -08 000000029 INF: ===================Camera #2 Frame #106===================
17-02-28 20:53:12.337 -08 000000027 INF: Y Motor: Unshifted Position: 4066861
17-02-28 20:53:12.387 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:12.456 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:53:12.456 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:53:12.456 -08 000000087 INF: ===================Camera #0 Frame #112===================
17-02-28 20:53:12.485 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:53:12.485 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:53:12.485 -08 000000029 INF: ===================Camera #2 Frame #113===================
17-02-28 20:53:12.511 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:12.627 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:53:12.627 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:53:12.627 -08 000000087 INF: ===================Camera #0 Frame #118===================
17-02-28 20:53:12.649 -08 000000027 INF: Y Motor: Unshifted Position: 3865153
17-02-28 20:53:12.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:12.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left===================
17-02-28 20:53:12.660 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:53:12.660 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:53:12.660 -08 000000029 INF: ===================Camera #2 Frame #119===================
17-02-28 20:53:12.699 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:12.795 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:53:12.795 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:53:12.795 -08 000000087 INF: ===================Camera #0 Frame #124===================
17-02-28 20:53:12.824 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:12.831 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:53:12.831 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:53:12.831 -08 000000029 INF: ===================Camera #2 Frame #125===================
17-02-28 20:53:12.960 -08 000000027 INF: Y Motor: Unshifted Position: 3660831
17-02-28 20:53:12.963 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:53:12.963 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:53:12.963 -08 000000087 INF: ===================Camera #0 Frame #130===================
17-02-28 20:53:13.000 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:53:13.000 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:53:13.000 -08 000000029 INF: ===================Camera #2 Frame #132===================
17-02-28 20:53:13.010 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:13.131 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:53:13.131 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:53:13.131 -08 000000087 INF: ===================Camera #0 Frame #137===================
17-02-28 20:53:13.134 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:13.172 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:53:13.172 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:53:13.172 -08 000000029 INF: ===================Camera #2 Frame #138===================
17-02-28 20:53:13.272 -08 000000027 INF: Y Motor: Unshifted Position: 3458685
17-02-28 20:53:13.302 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:53:13.302 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:53:13.302 -08 000000087 INF: ===================Camera #0 Frame #143===================
17-02-28 20:53:13.322 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:13.341 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:53:13.341 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:53:13.341 -08 000000029 INF: ===================Camera #2 Frame #144===================
17-02-28 20:53:13.446 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:13.470 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:53:13.470 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:53:13.470 -08 000000087 INF: ===================Camera #0 Frame #149===================
17-02-28 20:53:13.510 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:53:13.510 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:53:13.510 -08 000000029 INF: ===================Camera #2 Frame #150===================
17-02-28 20:53:13.585 -08 000000027 INF: Y Motor: Unshifted Position: 3256973
17-02-28 20:53:13.635 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:13.638 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:53:13.638 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:53:13.638 -08 000000087 INF: ===================Camera #0 Frame #155===================
17-02-28 20:53:13.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:13.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:13.655 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:53:13.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:13.679 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:53:13.679 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:53:13.679 -08 000000029 INF: ===================Camera #2 Frame #157===================
17-02-28 20:53:13.754 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:53:13.759 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:13.806 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:53:13.806 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:53:13.806 -08 000000087 INF: ===================Camera #0 Frame #161===================
17-02-28 20:53:13.832 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:53:13.832 -08 000000018 INF: Current Position of Pump is: 11904
17-02-28 20:53:13.851 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:53:13.851 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:53:13.851 -08 000000029 INF: ===================Camera #2 Frame #163===================
17-02-28 20:53:13.895 -08 000000027 INF: Y Motor: Unshifted Position: 3053528
17-02-28 20:53:13.932 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:53:13.945 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:13.977 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:53:13.977 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:53:13.977 -08 000000087 INF: ===================Camera #0 Frame #168===================
17-02-28 20:53:14.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:53:14.021 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:53:14.021 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:53:14.021 -08 000000018 INF: Current Position of Pump is: 11904
17-02-28 20:53:14.021 -08 000000029 INF: ===================Camera #2 Frame #169===================
17-02-28 20:53:14.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-02-28 20:53:14.072 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:14.121 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11904R\r
17-02-28 20:53:14.150 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:53:14.150 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:53:14.150 -08 000000087 INF: ===================Camera #0 Frame #174===================
17-02-28 20:53:14.191 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:53:14.191 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:53:14.191 -08 000000029 INF: ===================Camera #2 Frame #176===================
17-02-28 20:53:14.208 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:14.209 -08 000000027 INF: Y Motor: Unshifted Position: 2848782
17-02-28 20:53:14.259 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:14.308 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:14.320 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:53:14.320 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:53:14.320 -08 000000087 INF: ===================Camera #0 Frame #180===================
17-02-28 20:53:14.363 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:53:14.363 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:53:14.363 -08 000000029 INF: ===================Camera #2 Frame #182===================
17-02-28 20:53:14.383 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:14.394 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:14.488 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:53:14.488 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:53:14.488 -08 000000087 INF: ===================Camera #0 Frame #186===================
17-02-28 20:53:14.521 -08 000000027 INF: Y Motor: Unshifted Position: 2647714
17-02-28 20:53:14.533 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:53:14.533 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:53:14.533 -08 000000029 INF: ===================Camera #2 Frame #188===================
17-02-28 20:53:14.571 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:14.644 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:14.658 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:53:14.658 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:53:14.658 -08 000000087 INF: ===================Camera #0 Frame #193===================
17-02-28 20:53:14.697 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:14.703 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:53:14.703 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:53:14.703 -08 000000029 INF: ===================Camera #2 Frame #194===================
17-02-28 20:53:14.707 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:14.831 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:53:14.831 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:53:14.831 -08 000000087 INF: ===================Camera #0 Frame #199===================
17-02-28 20:53:14.833 -08 000000027 INF: Y Motor: Unshifted Position: 2444052
17-02-28 20:53:14.873 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:53:14.873 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:53:14.873 -08 000000029 INF: ===================Camera #2 Frame #201===================
17-02-28 20:53:14.883 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:14.957 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:15.001 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:53:15.001 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:53:15.001 -08 000000087 INF: ===================Camera #0 Frame #205===================
17-02-28 20:53:15.006 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:15.017 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:15.047 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:53:15.047 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:53:15.047 -08 000000029 INF: ===================Camera #2 Frame #207===================
17-02-28 20:53:15.145 -08 000000027 INF: Y Motor: Unshifted Position: 2242341
17-02-28 20:53:15.171 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:53:15.171 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:53:15.171 -08 000000087 INF: ===================Camera #0 Frame #212===================
17-02-28 20:53:15.195 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:15.218 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:53:15.218 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:53:15.218 -08 000000029 INF: ===================Camera #2 Frame #213===================
17-02-28 20:53:15.267 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:15.320 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:15.332 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:15.344 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:53:15.344 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:53:15.344 -08 000000087 INF: ===================Camera #0 Frame #218===================
17-02-28 20:53:15.389 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:53:15.389 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:53:15.389 -08 000000029 INF: ===================Camera #2 Frame #220===================
17-02-28 20:53:15.456 -08 000000027 INF: Y Motor: Unshifted Position: 2038234
17-02-28 20:53:15.506 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:15.514 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:53:15.514 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:53:15.514 -08 000000087 INF: ===================Camera #0 Frame #224===================
17-02-28 20:53:15.563 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:53:15.563 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:53:15.563 -08 000000029 INF: ===================Camera #2 Frame #226===================
17-02-28 20:53:15.582 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:15.630 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:15.643 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:15.684 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:53:15.684 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:53:15.684 -08 000000087 INF: ===================Camera #0 Frame #231===================
17-02-28 20:53:15.733 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:53:15.733 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:53:15.733 -08 000000029 INF: ===================Camera #2 Frame #232===================
17-02-28 20:53:15.769 -08 000000027 INF: Y Motor: Unshifted Position: 1836517
17-02-28 20:53:15.819 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:15.857 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:53:15.857 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:53:15.857 -08 000000087 INF: ===================Camera #0 Frame #237===================
17-02-28 20:53:15.894 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:15.903 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:53:15.903 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:53:15.903 -08 000000029 INF: ===================Camera #2 Frame #239===================
17-02-28 20:53:15.943 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:15.954 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:15.954 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:53:15.954 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:53:16.027 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:53:16.027 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:53:16.027 -08 000000087 INF: ===================Camera #0 Frame #243===================
17-02-28 20:53:16.077 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:53:16.077 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:53:16.077 -08 000000029 INF: ===================Camera #2 Frame #245===================
17-02-28 20:53:16.079 -08 000000027 INF: Y Motor: Unshifted Position: 1633062
17-02-28 20:53:16.129 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:16.197 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:53:16.197 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:53:16.197 -08 000000087 INF: ===================Camera #0 Frame #249===================
17-02-28 20:53:16.247 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:53:16.247 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:53:16.247 -08 000000029 INF: ===================Camera #2 Frame #251===================
17-02-28 20:53:16.256 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:16.365 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:53:16.365 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:53:16.365 -08 000000087 INF: ===================Camera #0 Frame #256===================
17-02-28 20:53:16.393 -08 000000027 INF: Y Motor: Unshifted Position: 1429611
17-02-28 20:53:16.416 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:53:16.416 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:53:16.416 -08 000000029 INF: ===================Camera #2 Frame #257===================
17-02-28 20:53:16.443 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:16.539 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:53:16.539 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:53:16.539 -08 000000087 INF: ===================Camera #0 Frame #262===================
17-02-28 20:53:16.567 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:16.587 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:53:16.587 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:53:16.587 -08 000000029 INF: ===================Camera #2 Frame #264===================
17-02-28 20:53:16.706 -08 000000027 INF: Y Motor: Unshifted Position: 1227880
17-02-28 20:53:16.709 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:53:16.709 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:53:16.709 -08 000000087 INF: ===================Camera #0 Frame #268===================
17-02-28 20:53:16.756 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:16.761 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:53:16.761 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:53:16.761 -08 000000029 INF: ===================Camera #2 Frame #270===================
17-02-28 20:53:16.828 -08 000000064 INF: FPGA: Recv TDIYWAIT
17-02-28 20:53:16.828 -08 000000126 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:16.830 -08 000000126 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:53:16.831 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:53:16.831 -08 000000104 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:53:16.831 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:53:16.831 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:53:16.831 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:53:16.831 -08 000000104 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:53:16.831 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:53:16.831 -08 000000104 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:53:16.831 -08 000000104 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:53:16.832 -08 000000104 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:53:16.878 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:16.878 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:16.878 -08 000000087 INF: ===================Camera #0 Frame #272===================
17-02-28 20:53:16.880 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:16.891 -08 000000087 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:16.892 -08 000000087 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:17.016 -08 000000027 INF: Y Motor: Unshifted Position: 1024223
17-02-28 20:53:17.025 -08 000000087 INF: Camera #0 ReleaseBuffer
17-02-28 20:53:17.025 -08 000000029 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:17.025 -08 000000029 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:17.025 -08 000000029 INF: ===================Camera #2 Frame #272===================
17-02-28 20:53:17.025 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:53:17.032 -08 000000029 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:17.033 -08 000000029 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:17.055 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:53:17.056 -08 000000087 INF: ======================================
17-02-28 20:53:17.066 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:17.139 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:17.203 -08 000000051 INF: FPGA: Recv EX1MV
17-02-28 20:53:17.203 -08 000000051 INF: FPGA: Recv EX2MV
17-02-28 20:53:17.203 -08 000000104 INF: Excitation Filter 2: Moved 107 steps in 371.6352 ms
17-02-28 20:53:17.203 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 371.8397 ms
17-02-28 20:53:17.203 -08 000000104 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8184 ms
17-02-28 20:53:17.203 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9815 ms
17-02-28 20:53:17.203 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1861 ms
17-02-28 20:53:17.203 -08 000000104 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9865 ms
17-02-28 20:53:17.204 -08 000000077 INF: ======================================
17-02-28 20:53:17.204 -08 000000104 INF: ======================================
17-02-28 20:53:17.205 -08 000000027 INF: Y Motor: Unshifted Position: 991268
17-02-28 20:53:17.205 -08 000000029 INF: Camera #2 ReleaseBuffer
17-02-28 20:53:17.205 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:17.205 -08 000000027 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:17.205 -08 000000126 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:17.205 -08 000000029 INF: ===================Camera TDI===================
17-02-28 20:53:17.206 -08 000000126 INF: ======================================
17-02-28 20:53:17.238 -08 000000029 INF: ======================================
17-02-28 20:53:17.239 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:17.240 -08 000000096 INF: ===================Camera TDI===================
17-02-28 20:53:17.241 -08 000000096 INF: ======================================
17-02-28 20:53:17.269 -08 000000027 INF: Y Motor: Recv v 0\r
17-02-28 20:53:17.269 -08 000000027 INF: Y Motor: Moved to 14.9127 after 7865 ms
17-02-28 20:53:17.269 -08 000000027 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:17.328 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:17.329 -08 000000027 INF: Y Motor: Recv v 4097\r
17-02-28 20:53:17.329 -08 000000027 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:17.329 -08 000000027 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:17.391 -08 000000027 INF: Y Motor: Recv v 0\r
17-02-28 20:53:17.391 -08 000000027 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:17.391 -08 000000027 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:17.453 -08 000000027 INF: Y Motor: Recv v 134217728\r
17-02-28 20:53:17.453 -08 000000027 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:53:17.453 -08 000000027 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:17.453 -08 000000027 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:17.515 -08 000000027 INF: Y Motor: Recv v 0\r
17-02-28 20:53:17.515 -08 000000027 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:17.515 -08 000000027 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:17.515 -08 000000027 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:17.577 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:53:17.577 -08 000000027 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:17.577 -08 000000027 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:17.578 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:17.641 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:17.641 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:17.641 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:53:17.642 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:53:17.642 -08 000000027 INF: ======================================
17-02-28 20:53:17.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:17.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:17.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:17.645 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:53:17.702 -08 000000029 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:53:17.702 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:17.765 -08 000000097 INF: FPGA: Recv TDIYERD 1491270
17-02-28 20:53:17.765 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:53:17.826 -08 000000093 INF: FPGA: Recv ZADCR 34764
17-02-28 20:53:17.826 -08 000000042 INF: At scan end Y pos = 14.913 and Z pos = -0.133. Y moved -48.539 mm
17-02-28 20:53:17.826 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:53:17.888 -08 000000040 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:53:17.888 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:53:17.888 -08 000000042 INF: TDIScan finished after 12626.25 ms
17-02-28 20:53:17.888 -08 000000042 INF: Image[0]: Y should trigger at 63.452 mm, 2nd row was at 64.361 mm (error = 0.909 mm)
17-02-28 20:53:17.888 -08 000000042 INF: Image[2]: Y should trigger at 63.452 mm, 2nd row was at 64.361 mm (error = 0.909 mm)
17-02-28 20:53:17.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:17.925 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.494 um
17-02-28 20:53:17.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:17.926 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:53:17.950 -08 000000129 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:53:17.951 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:17.951 -08 000000070 INF: ===================Dither Clean Up Command===================
17-02-28 20:53:17.951 -08 000000064 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:53:17.951 -08 000000111 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:53:17.951 -08 000000087 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:53:17.952 -08 000000087 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:53:17.952 -08 000000064 INF: ======================================
17-02-28 20:53:17.952 -08 000000087 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:53:17.952 -08 000000111 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:53:17.952 -08 000000111 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:53:17.952 -08 000000052 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:17.952 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:17.953 -08 000000052 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:53:17.955 -08 000000051 INF: ===================LFT:Extracting coords===================
17-02-28 20:53:17.981 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:17.981 -08 000000051 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:53:17.982 -08 000000040 INF: ===================LookupFocusTracking===================
17-02-28 20:53:17.982 -08 000000071 INF: ===================LookupFocusTracking===================
17-02-28 20:53:17.982 -08 000000027 INF: ===================LookupFocusTracking===================
17-02-28 20:53:17.982 -08 000000063 INF: ===================LookupFocusTracking===================
17-02-28 20:53:17.982 -08 000000040 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:17.983 -08 000000071 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:17.983 -08 000000063 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:17.983 -08 000000027 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:18.012 -08 000000126 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:18.012 -08 000000126 INF: FPGA: Recv ZSEL 
17-02-28 20:53:18.012 -08 000000052 INF: FPGA: Xmit ZDACW 40027\n
17-02-28 20:53:18.012 -08 000000087 INF: ======================================
17-02-28 20:53:18.014 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:53:18.014 -08 000000111 INF: ======================================
17-02-28 20:53:18.057 -08 000000040 INF: FC:B, C:5,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:18.057 -08 000000071 INF: FC:B, C:5,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:18.057 -08 000000063 INF: FC:B, C:5,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:18.057 -08 000000027 INF: FC:B, C:5,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:18.074 -08 000000094 INF: FPGA: Recv ZDACW 
17-02-28 20:53:18.075 -08 000000052 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:53:18.075 -08 000000052 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:53:18.139 -08 000000031 INF: FPGA: Recv TDIBB
17-02-28 20:53:18.139 -08 000000052 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:18.140 -08 000000052 INF: ======================================
17-02-28 20:53:18.208 -08 000000071 INF: LFT found best fwhm score 2.000223 in 151 ms
17-02-28 20:53:18.208 -08 000000071 INF: LFT found good score at index 3285 with fwhm value 2.000223. Next cycle, cycle 6 starting Z position for top surface is at -0.155 mm FC:B, C:5,L:2,T
17-02-28 20:53:18.208 -08 000000040 INF: LFT found best fwhm score 2.000138 in 151 ms
17-02-28 20:53:18.208 -08 000000040 INF: LFT found good score at index 2173 with fwhm value 2.000138. Next cycle, cycle 6 starting Z position for top surface is at -0.156 mm FC:B, C:5,L:2,T
17-02-28 20:53:18.208 -08 000000071 INF: ===================LookupFocusTracking===================
17-02-28 20:53:18.208 -08 000000063 INF: LFT found best fwhm score 2.154704 in 151 ms
17-02-28 20:53:18.208 -08 000000027 INF: LFT found best fwhm score 2.000078 in 151 ms
17-02-28 20:53:18.208 -08 000000040 INF: ===================LookupFocusTracking===================
17-02-28 20:53:18.208 -08 000000027 INF: LFT found good score at index 8465 with fwhm value 2.000078. Next cycle, cycle 6 starting Z position for top surface is at -0.155 mm FC:B, C:5,L:2,T
17-02-28 20:53:18.208 -08 000000063 INF: LFT found good score at index 4273 with fwhm value 2.154704. Next cycle, cycle 6 starting Z position for top surface is at -0.155 mm FC:B, C:5,L:2,T
17-02-28 20:53:18.209 -08 000000071 INF: ======================================
17-02-28 20:53:18.209 -08 000000027 INF: ===================LookupFocusTracking===================
17-02-28 20:53:18.209 -08 000000063 INF: ===================LookupFocusTracking===================
17-02-28 20:53:18.209 -08 000000040 INF: ======================================
17-02-28 20:53:18.209 -08 000000027 INF: ======================================
17-02-28 20:53:18.209 -08 000000063 INF: ======================================
17-02-28 20:53:18.210 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:18.211 -08 000000051 INF: LFT weighted average best Z for top surface is at -0.155mm FC:B, C:5,L:2,T
17-02-28 20:53:18.211 -08 000000051 INF: ======================================
17-02-28 20:53:18.212 -08 000000070 INF: ======================================
17-02-28 20:53:18.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:18.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:53:18.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:18.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:53:18.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:18.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:53:18.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:18.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:53:18.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:18.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:53:18.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:53:18.216 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Closing shutoff valve, Waiting for image analysis===================
17-02-28 20:53:18.216 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:53:18.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:53:18.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:53:18.239 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:53:18.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:53:18.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:53:18.240 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:18.241 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:53:18.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 2===================
17-02-28 20:53:18.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface===================
17-02-28 20:53:18.257 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.258 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.259 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:53:18.259 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:53:18.295 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1203 Request: {"Cycle":5,"Lane":2,"Tile":1203,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF176","HCSMMF240","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:18.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:18.325 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:18.325 -08 000000018 INF: WaitCommand(10000) start
17-02-28 20:53:18.325 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-02-28 20:53:18.330 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:53:18.330 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.331 -08 000000042 INF: TopSurfaceZPositions[] was -0.15702190383861, so used the TopSurfaceZPositions[] (-0.15702190383861) + compensator value (0.0227).
17-02-28 20:53:18.334 -08 000000042 INF: LFT enabled: Best z-height for LaneTopSurface and Illumina.Instrument.Logic.Sentrix.II.SentrixSection was found to be -0.13432190383861
17-02-28 20:53:18.335 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:53:18.335 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.424 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1201 Request: {"Cycle":5,"Lane":2,"Tile":1201,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF202","HCSMMF277","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.429 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1205 Request: {"Cycle":5,"Lane":2,"Tile":1205,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF217","HCSMMF241","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.432 -08 000000104 INF: ===================Move Tilt Motor 1===================
17-02-28 20:53:18.433 -08 000000104 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0020 mm, delta = -0.0015 mm
17-02-28 20:53:18.433 -08 000000104 INF: FPGA: Xmit T1RD\n
17-02-28 20:53:18.439 -08 000000032 INF: ===================Move Tilt Motor 2===================
17-02-28 20:53:18.439 -08 000000032 INF: Tilt Motor 2: Moving to 5.3924 mm, started at 5.3909 mm, delta = 0.0015 mm
17-02-28 20:53:18.439 -08 000000032 INF: FPGA: Xmit T2RD\n
17-02-28 20:53:18.441 -08 000000055 INF: ===================Move Tilt Motor 3===================
17-02-28 20:53:18.441 -08 000000055 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3378 mm, delta = 0.0013 mm
17-02-28 20:53:18.442 -08 000000055 INF: FPGA: Xmit T3RD\n
17-02-28 20:53:18.483 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1202 Request: {"Cycle":5,"Lane":2,"Tile":1202,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF248","HCSMMF192","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.487 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1204 Request: {"Cycle":5,"Lane":2,"Tile":1204,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF193","HCSMMF271","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.490 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1209 Request: {"Cycle":5,"Lane":2,"Tile":1209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF258","HCSMMF239","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.497 -08 000000129 INF: FPGA: Recv T1RD 19693
17-02-28 20:53:18.497 -08 000000129 INF: FPGA: Recv T2RD 21224
17-02-28 20:53:18.497 -08 000000129 INF: FPGA: Recv T3RD 21014
17-02-28 20:53:18.498 -08 000000104 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:53:18.498 -08 000000104 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:53:18.498 -08 000000032 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:53:18.498 -08 000000032 INF: Tilt Motor 2: Moving to 21230 encoder counts
17-02-28 20:53:18.498 -08 000000055 INF: Tilt Motor 3: Encoder: at motor step 3502 + 2/6
17-02-28 20:53:18.498 -08 000000055 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:53:18.499 -08 000000104 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:53:18.501 -08 000000032 INF: FPGA: Xmit T2MOVETO 21230\n
17-02-28 20:53:18.504 -08 000000055 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:53:18.520 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1208 Request: {"Cycle":5,"Lane":2,"Tile":1208,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF242","HCSMMF212","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.522 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1207 Request: {"Cycle":5,"Lane":2,"Tile":1207,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF275","HCSMMF236","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.523 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1210 Request: {"Cycle":5,"Lane":2,"Tile":1210,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF272","HCSMMF184","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.524 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1206 Request: {"Cycle":5,"Lane":2,"Tile":1206,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF231","HCSMMF187","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.526 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1214 Request: {"Cycle":5,"Lane":2,"Tile":1214,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF233","HCSMMF235","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.528 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1213 Request: {"Cycle":5,"Lane":2,"Tile":1213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF257","HCSMMF287","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.530 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1212 Request: {"Cycle":5,"Lane":2,"Tile":1212,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF224","HCSMMF189","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.532 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1216 Request: {"Cycle":5,"Lane":2,"Tile":1216,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF203","HCSMMF215","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.536 -08 000000124 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1215 Request: {"Cycle":5,"Lane":2,"Tile":1215,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF188","HCSMMF223","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.540 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1211 Request: {"Cycle":5,"Lane":2,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF214","HCSMMF261","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.541 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1219 Request: {"Cycle":5,"Lane":2,"Tile":1219,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF204","HCSMMF252","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.545 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1221 Request: {"Cycle":5,"Lane":2,"Tile":1221,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF200","HCSMMF208","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.547 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1222 Request: {"Cycle":5,"Lane":2,"Tile":1222,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF246","HCSMMF207","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.548 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1223 Request: {"Cycle":5,"Lane":2,"Tile":1223,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF282","HCSMMF181","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.561 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1220 Request: {"Cycle":5,"Lane":2,"Tile":1220,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF196","HCSMMF273","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.562 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1218 Request: {"Cycle":5,"Lane":2,"Tile":1218,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF254","HCSMMF274","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.564 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1217 Request: {"Cycle":5,"Lane":2,"Tile":1217,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF247","HCSMMF228","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.567 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1224 Request: {"Cycle":5,"Lane":2,"Tile":1224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF220","HCSMMF267","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.571 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1225 Request: {"Cycle":5,"Lane":2,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF269","HCSMMF190","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.576 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1228 Request: {"Cycle":5,"Lane":2,"Tile":1228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF183","HCSMMF264","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.583 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1226 Request: {"Cycle":5,"Lane":2,"Tile":1226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF268","HCSMMF253","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.584 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 5 Tile: 1227 Request: {"Cycle":5,"Lane":2,"Tile":1227,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF180","HCSMMF286","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:18.592 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:18.598 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:53:18.620 -08 000000129 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:53:18.620 -08 000000129 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:53:18.620 -08 000000129 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:53:18.620 -08 000000055 INF: Tilt Motor 3: To move from 5.338 to 5.339 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:53:18.620 -08 000000032 INF: Tilt Motor 2: To move from 5.391 to 5.392 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:53:18.620 -08 000000104 INF: Tilt Motor 1: To move from 5.002 to 5.000 (-0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:53:18.620 -08 000000055 INF: FPGA: Xmit T3RD\n
17-02-28 20:53:18.621 -08 000000032 INF: FPGA: Xmit T2RD\n
17-02-28 20:53:18.623 -08 000000104 INF: FPGA: Xmit T1RD\n
17-02-28 20:53:18.685 -08 000000120 INF: FPGA: Recv T3RD 21021
17-02-28 20:53:18.685 -08 000000120 INF: FPGA: Recv T2RD 21230
17-02-28 20:53:18.685 -08 000000120 INF: FPGA: Recv T1RD 19687
17-02-28 20:53:18.685 -08 000000032 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:53:18.685 -08 000000032 INF: FPGA: Xmit T2RD\n
17-02-28 20:53:18.685 -08 000000104 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:53:18.686 -08 000000104 INF: FPGA: Xmit T1RD\n
17-02-28 20:53:18.686 -08 000000055 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:53:18.687 -08 000000055 INF: FPGA: Xmit T3RD\n
17-02-28 20:53:18.697 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:18.697 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:53:18.736 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:18.742 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:53:18.746 -08 000000129 INF: FPGA: Recv T2RD 21230
17-02-28 20:53:18.746 -08 000000129 INF: FPGA: Recv T1RD 19687
17-02-28 20:53:18.746 -08 000000129 INF: FPGA: Recv T3RD 21021
17-02-28 20:53:18.746 -08 000000055 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:53:18.746 -08 000000032 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:53:18.746 -08 000000104 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:53:18.746 -08 000000055 INF: FPGA: Xmit T3RD\n
17-02-28 20:53:18.749 -08 000000032 INF: FPGA: Xmit T2RD\n
17-02-28 20:53:18.750 -08 000000104 INF: FPGA: Xmit T1RD\n
17-02-28 20:53:18.808 -08 000000120 INF: FPGA: Recv T3RD 21021
17-02-28 20:53:18.808 -08 000000120 INF: FPGA: Recv T2RD 21230
17-02-28 20:53:18.808 -08 000000120 INF: FPGA: Recv T1RD 19687
17-02-28 20:53:18.808 -08 000000104 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:53:18.808 -08 000000055 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:53:18.808 -08 000000104 INF: Tilt Motor 1: After move to 5.0005, error = 0.0000, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:53:18.808 -08 000000055 INF: Tilt Motor 3: After move to 5.3391, error = 0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:53:18.808 -08 000000104 INF: Tilt Motor 1: Moved to 5.0005 after 375.2335 ms
17-02-28 20:53:18.808 -08 000000055 INF: Tilt Motor 3: Moved to 5.3393 after 366.8086 ms
17-02-28 20:53:18.808 -08 000000032 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:53:18.808 -08 000000032 INF: Tilt Motor 2: After move to 5.3924, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:53:18.808 -08 000000032 INF: Tilt Motor 2: Moved to 5.3924 after 369.1949 ms
17-02-28 20:53:18.808 -08 000000104 INF: ======================================
17-02-28 20:53:18.809 -08 000000055 INF: ======================================
17-02-28 20:53:18.809 -08 000000032 INF: ======================================
17-02-28 20:53:18.810 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.811 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.811 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.812 -08 000000042 INF: Compensator: Remaining IntoPath
17-02-28 20:53:18.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:18.820 -08 000000042 INF: Swath 1 position calculated to be: {X=74.16164, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:53:18.820 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26964, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:53:18.825 -08 000000042 INF: Swath 0: Converted transform from (-42.78153, 24.4225) pixels to (-0.014835, 0.00828) mm.
17-02-28 20:53:18.831 -08 000000042 INF: Swath 1: Converted transform from (-67.85895, 23.23343) pixels to (-0.02346, 0.007935) mm.
17-02-28 20:53:18.831 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:53:18.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:53:18.832 -08 000000042 INF: Transformed XStagePosition from 74.16164 mm to 74.1468013525009 mm.
17-02-28 20:53:18.844 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5613693551868 mm.
17-02-28 20:53:18.844 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3613693551868 mm.
17-02-28 20:53:18.844 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4521193551868 mm.
17-02-28 20:53:18.846 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:18.846 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:53:18.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:18.847 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -152.7 um, section = C_1
17-02-28 20:53:18.851 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:18.851 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:18.852 -08 000000059 INF: ===================MoveEmissionFilters===================
17-02-28 20:53:18.852 -08 000000096 INF: ===================Move X,Y===================
17-02-28 20:53:18.852 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:18.853 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:18.853 -08 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:18.853 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:53:18.853 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:18.853 -08 000000129 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:18.853 -08 000000123 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:53:18.853 -08 000000096 INF: ===================Move X,Y, Parallel===================
17-02-28 20:53:18.853 -08 000000123 INF: Z Motor: Moving to -0.1543 mm, started at -0.1527 mm
17-02-28 20:53:18.854 -08 000000123 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:53:18.854 -08 000000124 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:18.854 -08 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:18.854 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:18.854 -08 000000051 INF: ===================Move X Motor without settling===================
17-02-28 20:53:18.854 -08 000000111 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:18.854 -08 000000129 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:18.854 -08 000000111 INF: Y Motor: Moving to 64.5614 mm @25.000 mm/sec, started at 14.9127 mm
17-02-28 20:53:18.854 -08 000000124 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:18.855 -08 000000111 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:18.855 -08 000000111 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:18.855 -08 000000070 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:53:18.855 -08 000000097 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:53:18.855 -08 000000088 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:53:18.855 -08 000000119 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:53:18.855 -08 000000063 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:53:18.855 -08 000000122 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:53:18.855 -08 000000027 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:53:18.855 -08 000000126 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:53:18.857 -08 000000051 INF: X Motor: Xmit PR VM\n
17-02-28 20:53:18.857 -08 000000122 INF: ======================================
17-02-28 20:53:18.859 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:53:18.859 -08 000000126 INF: ======================================
17-02-28 20:53:18.859 -08 000000097 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:53:18.859 -08 000000027 INF: ======================================
17-02-28 20:53:18.859 -08 000000063 INF: ======================================
17-02-28 20:53:18.859 -08 000000088 INF: ======================================
17-02-28 20:53:18.859 -08 000000119 INF: ======================================
17-02-28 20:53:18.860 -08 000000097 INF: ======================================
17-02-28 20:53:18.860 -08 000000124 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:18.860 -08 000000129 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:18.861 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:18.861 -08 000000070 INF: ======================================
17-02-28 20:53:18.862 -08 000000124 INF: ======================================
17-02-28 20:53:18.862 -08 000000129 INF: ======================================
17-02-28 20:53:18.862 -08 000000038 INF: ======================================
17-02-28 20:53:18.862 -08 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:18.863 -08 000000061 INF: ======================================
17-02-28 20:53:18.864 -08 000000059 INF: ======================================
17-02-28 20:53:18.872 -08 000000120 INF: FPGA: Recv ZTRG 
17-02-28 20:53:18.873 -08 000000123 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:53:18.935 -08 000000088 INF: FPGA: Recv ZYT 
17-02-28 20:53:18.935 -08 000000123 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:53:18.935 -08 000000123 INF: FPGA: Xmit ZMV 40454\n
17-02-28 20:53:18.936 -08 000000051 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:53:18.936 -08 000000051 INF: X Motor: Xmit PR VI\n
17-02-28 20:53:18.936 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:53:18.936 -08 000000111 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:18.936 -08 000000111 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:18.949 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:18.954 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:53:18.996 -08 000000089 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:53:18.996 -08 000000089 INF: FPGA: Recv ZMV 
17-02-28 20:53:18.996 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:53:18.996 -08 000000123 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.1531 ms
17-02-28 20:53:18.996 -08 000000123 INF: FPGA: Xmit ZDACR\n
17-02-28 20:53:18.998 -08 000000051 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:53:18.998 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:53:18.998 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:18.998 -08 000000051 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:53:18.998 -08 000000051 INF: X Motor: Moving to 74.1468 mm @15.000 mm/sec, started at 72.4814 mm
17-02-28 20:53:18.998 -08 000000051 INF: X Motor: Xmit MA 6204\n
17-02-28 20:53:19.057 -08 000000097 INF: FPGA: Recv ZDACR 40454
17-02-28 20:53:19.057 -08 000000123 INF: Z Motor: MoveAndTrigger took 203.8527 ms w/comms
17-02-28 20:53:19.057 -08 000000123 INF: Z Motor: After move to -0.1543, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:53:19.057 -08 000000123 INF: Z Motor: MoveAbsStepped took 204.0276 ms
17-02-28 20:53:19.058 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:19.059 -08 000000111 INF: Y Motor: Recv v 0\r
17-02-28 20:53:19.059 -08 000000111 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:19.059 -08 000000111 INF: Y Motor: Set target position to 5956137 encoder counts
17-02-28 20:53:19.059 -08 000000111 INF: Y Motor: Xmit s r0xca 5956137\r
17-02-28 20:53:19.059 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:53:19.060 -08 000000051 INF: X Motor: Recv MA 6204\r\n>
17-02-28 20:53:19.060 -08 000000051 INF: X Motor: WaitUntilStopped 60111
17-02-28 20:53:19.060 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:53:19.060 -08 000000080 INF: ===================Camera Arm TDI===================
17-02-28 20:53:19.061 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:19.061 -08 000000080 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:19.061 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:19.062 -08 000000080 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:19.062 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:19.062 -08 000000072 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:53:19.073 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:19.122 -08 000000036 INF: FPGA: Recv ZSEL 
17-02-28 20:53:19.123 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:19.123 -08 000000072 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:53:19.124 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:53:19.124 -08 000000111 INF: Y Motor: Start the move command
17-02-28 20:53:19.124 -08 000000111 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:19.184 -08 000000093 INF: FPGA: Recv TDIBB
17-02-28 20:53:19.184 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:19.186 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:19.186 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:19.187 -08 000000072 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:53:19.188 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:53:19.188 -08 000000072 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:53:19.188 -08 000000072 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:53:19.188 -08 000000111 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:53:19.188 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:19.246 -08 000000063 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:19.246 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:19.248 -08 000000072 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:53:19.248 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:19.250 -08 000000072 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:53:19.250 -08 000000072 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:53:19.250 -08 000000072 INF: Z Motor: Arming to move to -0.1143 mm
17-02-28 20:53:19.250 -08 000000072 INF: FPGA: Xmit ZYT 6436137 4\n
17-02-28 20:53:19.308 -08 000000122 INF: FPGA: Recv ZYT 
17-02-28 20:53:19.308 -08 000000072 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1491268 enc / 14.913 mm / ) = 6436137 enc / 64.361 mm
17-02-28 20:53:19.308 -08 000000072 INF: FPGA: Xmit ZARM 29968\n
17-02-28 20:53:19.310 -08 000000111 INF: Y Motor: Unshifted Position: 1072777
17-02-28 20:53:19.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:19.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left===================
17-02-28 20:53:19.360 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:19.360 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:53:19.369 -08 000000059 INF: FPGA: Recv ZARM
17-02-28 20:53:19.369 -08 000000072 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.8331 ms
17-02-28 20:53:19.369 -08 000000072 INF: Z Motor: ArmAbsStepped took 118.5472 ms
17-02-28 20:53:19.369 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:19.371 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:53:19.372 -08 000000072 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:53:19.372 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:53:19.374 -08 000000072 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:53:19.374 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:53:19.376 -08 000000072 INF: ======================================
17-02-28 20:53:19.486 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:19.621 -08 000000111 INF: Y Motor: Unshifted Position: 1783763
17-02-28 20:53:19.671 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:19.685 -08 000000051 INF: X Motor: Xmit PR ER\n
17-02-28 20:53:19.699 -08 000000080 INF: Camera #0 AttachBuffer (imageDataPtr = 56923197488 imgPtr = 56923197488 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:19.699 -08 000000080 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:19.699 -08 000000080 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:19.715 -08 000000080 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:19.717 -08 000000080 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:19.747 -08 000000051 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:53:19.747 -08 000000051 INF: X Motor: Moved to 74.1465 after 687 ms
17-02-28 20:53:19.748 -08 000000051 INF: ======================================
17-02-28 20:53:19.797 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:19.935 -08 000000111 INF: Y Motor: Unshifted Position: 2553783
17-02-28 20:53:19.985 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:20.108 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:20.247 -08 000000111 INF: Y Motor: Unshifted Position: 3339565
17-02-28 20:53:20.297 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:20.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:20.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left===================
17-02-28 20:53:20.342 -08 000000080 INF: Camera #2 AttachBuffer (imageDataPtr = 58735136816 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:20.342 -08 000000080 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:20.342 -08 000000080 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:20.357 -08 000000080 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:20.359 -08 000000080 INF: ===================Camera Arm TDI===================
17-02-28 20:53:20.360 -08 000000080 INF: ======================================
17-02-28 20:53:20.361 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:20.362 -08 000000123 INF: ======================================
17-02-28 20:53:20.420 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:20.557 -08 000000111 INF: Y Motor: Unshifted Position: 4117146
17-02-28 20:53:20.607 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:20.733 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:20.871 -08 000000111 INF: Y Motor: Unshifted Position: 4895405
17-02-28 20:53:20.921 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:21.044 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:21.182 -08 000000111 INF: Y Motor: Unshifted Position: 5679142
17-02-28 20:53:21.232 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:21.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:21.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left===================
17-02-28 20:53:21.355 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:21.493 -08 000000111 INF: Y Motor: Unshifted Position: 5956138
17-02-28 20:53:21.543 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:21.681 -08 000000111 INF: Y Motor: Unshifted Position: 5956137
17-02-28 20:53:21.681 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:21.681 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:21.742 -08 000000111 INF: Y Motor: Recv v 0\r
17-02-28 20:53:21.742 -08 000000111 INF: Y Motor: Moved to 64.5614 after 2554 ms
17-02-28 20:53:21.742 -08 000000111 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:21.805 -08 000000111 INF: Y Motor: Recv v 4096\r
17-02-28 20:53:21.805 -08 000000111 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:21.805 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:21.869 -08 000000111 INF: Y Motor: Recv v 0\r
17-02-28 20:53:21.869 -08 000000111 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:21.869 -08 000000111 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:21.931 -08 000000111 INF: Y Motor: Recv v 402653184\r
17-02-28 20:53:21.931 -08 000000111 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:53:21.931 -08 000000111 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:21.931 -08 000000111 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:21.992 -08 000000111 INF: Y Motor: Recv v 0\r
17-02-28 20:53:21.992 -08 000000111 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:21.992 -08 000000111 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:21.992 -08 000000111 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:22.056 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:53:22.056 -08 000000111 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:22.056 -08 000000111 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:22.119 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:53:22.119 -08 000000111 INF: ======================================
17-02-28 20:53:22.120 -08 000000096 INF: ===================Move X,Y===================
17-02-28 20:53:22.121 -08 000000096 INF: ======================================
17-02-28 20:53:22.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:22.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:22.124 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:53:22.124 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:53:22.180 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:53:22.180 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:53:22.240 -08 000000118 INF: FPGA: Recv ZFREQCL
17-02-28 20:53:22.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:53:22.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:22.241 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:22.302 -08 000000124 INF: FPGA: Recv TDIYERD 6456138
17-02-28 20:53:22.302 -08 000000042 INF: Before scan, Y encoder from FPGA = 6456138 counts (64.561 mm)
17-02-28 20:53:22.303 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:22.303 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:22.304 -08 000000040 INF: ===================TDI FPGA Arm===================
17-02-28 20:53:22.304 -08 000000089 INF: ===================Set YMotor gains for scans===================
17-02-28 20:53:22.305 -08 000000089 INF: ======================================
17-02-28 20:53:22.305 -08 000000040 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:22.305 -08 000000040 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:53:22.305 -08 000000040 INF: FPGA: Xmit TDIYPOS 6345212\n
17-02-28 20:53:22.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:22.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-02-28 20:53:22.366 -08 000000027 INF: FPGA: Recv TDIYPOS
17-02-28 20:53:22.366 -08 000000040 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:22.368 -08 000000040 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:53:22.368 -08 000000040 INF: FPGA: Xmit TDIYARM3 139264 6436137 1 1\n
17-02-28 20:53:22.428 -08 000000129 INF: FPGA: Recv TDIYARM3
17-02-28 20:53:22.429 -08 000000040 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:22.430 -08 000000040 INF: ===================TDI FPGA Arm===================
17-02-28 20:53:22.431 -08 000000040 INF: ======================================
17-02-28 20:53:22.432 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:22.433 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:22.433 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:22.433 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:22.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:22.434 -08 000000061 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:53:22.434 -08 000000055 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:53:22.435 -08 000000061 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:53:22.435 -08 000000061 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:53:22.435 -08 000000061 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:53:22.435 -08 000000055 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:53:22.435 -08 000000061 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:53:22.435 -08 000000055 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:53:22.435 -08 000000055 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:53:22.440 -08 000000055 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:53:22.865 -08 000000118 INF: FPGA: Recv EX2MV
17-02-28 20:53:22.865 -08 000000118 INF: FPGA: Recv EX1MV
17-02-28 20:53:22.865 -08 000000061 INF: Excitation Filter 2: Moved -107 steps in 430.3047 ms
17-02-28 20:53:22.865 -08 000000055 INF: Excitation Filter 1: Moved -107 steps in 430.1903 ms
17-02-28 20:53:22.865 -08 000000055 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.4009 ms
17-02-28 20:53:22.865 -08 000000055 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 430.48 ms
17-02-28 20:53:22.865 -08 000000061 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 430.4149 ms
17-02-28 20:53:22.865 -08 000000061 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 430.7928 ms
17-02-28 20:53:22.865 -08 000000055 INF: ======================================
17-02-28 20:53:22.866 -08 000000061 INF: ======================================
17-02-28 20:53:22.867 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:22.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:22.869 -08 000000129 INF: ===================Camera TDI===================
17-02-28 20:53:22.869 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:22.869 -08 000000089 INF: ===================FPGA Z Wait===================
17-02-28 20:53:22.869 -08 000000072 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:22.869 -08 000000072 INF: Y Motor: Moving to 14.9130 mm @6.500 mm/sec, started at 64.5614 mm
17-02-28 20:53:22.869 -08 000000072 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:22.869 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:22.869 -08 000000129 INF: ===================Camera TDI, Parallel===================
17-02-28 20:53:22.870 -08 000000095 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:53:22.870 -08 000000095 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:53:22.870 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:53:22.870 -08 000000096 INF: ===================Camera TDI===================
17-02-28 20:53:22.871 -08 000000089 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:53:22.872 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:22.872 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:22.872 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:22.873 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:22.930 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:53:22.930 -08 000000072 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:22.930 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:22.991 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:53:22.991 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:23.022 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:23.022 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:23.023 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:23.023 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:23.053 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:53:23.053 -08 000000072 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:23.053 -08 000000072 INF: Y Motor: Set target position to 991303 encoder counts
17-02-28 20:53:23.053 -08 000000072 INF: Y Motor: Xmit s r0xca 991303\r
17-02-28 20:53:23.117 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:53:23.117 -08 000000072 INF: Y Motor: Start the move command
17-02-28 20:53:23.117 -08 000000072 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:23.172 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:23.172 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:23.173 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:23.173 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:23.179 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:53:23.179 -08 000000072 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:53:23.179 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:23.239 -08 000000120 INF: FPGA: Recv ZWAIT 
17-02-28 20:53:23.240 -08 000000089 INF: ======================================
17-02-28 20:53:23.304 -08 000000072 INF: Y Motor: Unshifted Position: 5894288
17-02-28 20:53:23.322 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:53:23.322 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:53:23.322 -08 000000038 INF: ===================Camera #0 Frame #5===================
17-02-28 20:53:23.323 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:53:23.323 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:53:23.323 -08 000000096 INF: ===================Camera #2 Frame #5===================
17-02-28 20:53:23.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:23.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left===================
17-02-28 20:53:23.354 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:23.477 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:23.490 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:53:23.490 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:53:23.490 -08 000000096 INF: ===================Camera #2 Frame #11===================
17-02-28 20:53:23.495 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:53:23.495 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:53:23.495 -08 000000038 INF: ===================Camera #0 Frame #11===================
17-02-28 20:53:23.615 -08 000000072 INF: Y Motor: Unshifted Position: 5690835
17-02-28 20:53:23.660 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:53:23.660 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:53:23.660 -08 000000096 INF: ===================Camera #2 Frame #17===================
17-02-28 20:53:23.664 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:53:23.664 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:53:23.664 -08 000000038 INF: ===================Camera #0 Frame #17===================
17-02-28 20:53:23.665 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:23.791 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:23.829 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:53:23.829 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:53:23.829 -08 000000096 INF: ===================Camera #2 Frame #23===================
17-02-28 20:53:23.841 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:53:23.841 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:53:23.841 -08 000000038 INF: ===================Camera #0 Frame #24===================
17-02-28 20:53:23.926 -08 000000072 INF: Y Motor: Unshifted Position: 5488690
17-02-28 20:53:23.976 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:24.003 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:53:24.003 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:53:24.003 -08 000000096 INF: ===================Camera #2 Frame #30===================
17-02-28 20:53:24.015 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:53:24.015 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:53:24.015 -08 000000038 INF: ===================Camera #0 Frame #30===================
17-02-28 20:53:24.102 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:24.175 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:53:24.175 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:53:24.175 -08 000000096 INF: ===================Camera #2 Frame #36===================
17-02-28 20:53:24.185 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:53:24.185 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:53:24.185 -08 000000038 INF: ===================Camera #0 Frame #36===================
17-02-28 20:53:24.240 -08 000000072 INF: Y Motor: Unshifted Position: 5286323
17-02-28 20:53:24.290 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:24.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:24.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left===================
17-02-28 20:53:24.348 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:53:24.348 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:53:24.348 -08 000000096 INF: ===================Camera #2 Frame #42===================
17-02-28 20:53:24.357 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:53:24.357 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:53:24.357 -08 000000038 INF: ===================Camera #0 Frame #43===================
17-02-28 20:53:24.414 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:24.517 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:53:24.517 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:53:24.517 -08 000000096 INF: ===================Camera #2 Frame #49===================
17-02-28 20:53:24.529 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:53:24.529 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:53:24.529 -08 000000038 INF: ===================Camera #0 Frame #49===================
17-02-28 20:53:24.552 -08 000000072 INF: Y Motor: Unshifted Position: 5083299
17-02-28 20:53:24.602 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:24.692 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:53:24.692 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:53:24.692 -08 000000096 INF: ===================Camera #2 Frame #55===================
17-02-28 20:53:24.698 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:53:24.698 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:53:24.698 -08 000000038 INF: ===================Camera #0 Frame #55===================
17-02-28 20:53:24.725 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:24.863 -08 000000072 INF: Y Motor: Unshifted Position: 4879201
17-02-28 20:53:24.863 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:53:24.863 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:53:24.863 -08 000000096 INF: ===================Camera #2 Frame #61===================
17-02-28 20:53:24.867 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:53:24.867 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:53:24.867 -08 000000038 INF: ===================Camera #0 Frame #61===================
17-02-28 20:53:24.913 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:25.034 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:53:25.034 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:53:25.034 -08 000000096 INF: ===================Camera #2 Frame #68===================
17-02-28 20:53:25.035 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:53:25.035 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:53:25.035 -08 000000038 INF: ===================Camera #0 Frame #68===================
17-02-28 20:53:25.039 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:25.174 -08 000000072 INF: Y Motor: Unshifted Position: 4676837
17-02-28 20:53:25.208 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:53:25.208 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:53:25.208 -08 000000038 INF: ===================Camera #0 Frame #74===================
17-02-28 20:53:25.209 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:53:25.209 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:53:25.209 -08 000000096 INF: ===================Camera #2 Frame #74===================
17-02-28 20:53:25.224 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:25.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:25.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left===================
17-02-28 20:53:25.349 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:25.377 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:53:25.377 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:53:25.377 -08 000000038 INF: ===================Camera #0 Frame #80===================
17-02-28 20:53:25.379 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:53:25.379 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:53:25.379 -08 000000096 INF: ===================Camera #2 Frame #80===================
17-02-28 20:53:25.487 -08 000000072 INF: Y Motor: Unshifted Position: 4473379
17-02-28 20:53:25.537 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:25.546 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:53:25.546 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:53:25.546 -08 000000038 INF: ===================Camera #0 Frame #86===================
17-02-28 20:53:25.550 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:53:25.550 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:53:25.550 -08 000000096 INF: ===================Camera #2 Frame #87===================
17-02-28 20:53:25.663 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:25.715 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:53:25.715 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:53:25.715 -08 000000038 INF: ===================Camera #0 Frame #93===================
17-02-28 20:53:25.727 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:53:25.727 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:53:25.727 -08 000000096 INF: ===================Camera #2 Frame #93===================
17-02-28 20:53:25.798 -08 000000072 INF: Y Motor: Unshifted Position: 4271010
17-02-28 20:53:25.848 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:25.888 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:53:25.888 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:53:25.888 -08 000000038 INF: ===================Camera #0 Frame #99===================
17-02-28 20:53:25.900 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:53:25.900 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:53:25.900 -08 000000096 INF: ===================Camera #2 Frame #99===================
17-02-28 20:53:25.974 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:26.058 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:53:26.058 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:53:26.058 -08 000000038 INF: ===================Camera #0 Frame #105===================
17-02-28 20:53:26.071 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:53:26.071 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:53:26.071 -08 000000096 INF: ===================Camera #2 Frame #106===================
17-02-28 20:53:26.112 -08 000000072 INF: Y Motor: Unshifted Position: 4068854
17-02-28 20:53:26.162 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:26.227 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:53:26.227 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:53:26.227 -08 000000038 INF: ===================Camera #0 Frame #111===================
17-02-28 20:53:26.245 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:53:26.245 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:53:26.245 -08 000000096 INF: ===================Camera #2 Frame #112===================
17-02-28 20:53:26.285 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:26.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:26.326 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left===================
17-02-28 20:53:26.395 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:53:26.395 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:53:26.395 -08 000000038 INF: ===================Camera #0 Frame #118===================
17-02-28 20:53:26.416 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:53:26.416 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:53:26.416 -08 000000096 INF: ===================Camera #2 Frame #118===================
17-02-28 20:53:26.424 -08 000000072 INF: Y Motor: Unshifted Position: 3865837
17-02-28 20:53:26.475 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:26.568 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:53:26.568 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:53:26.568 -08 000000038 INF: ===================Camera #0 Frame #124===================
17-02-28 20:53:26.588 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:53:26.588 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:53:26.588 -08 000000096 INF: ===================Camera #2 Frame #125===================
17-02-28 20:53:26.598 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:26.737 -08 000000072 INF: Y Motor: Unshifted Position: 3661517
17-02-28 20:53:26.737 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:53:26.737 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:53:26.737 -08 000000038 INF: ===================Camera #0 Frame #130===================
17-02-28 20:53:26.762 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:53:26.762 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:53:26.762 -08 000000096 INF: ===================Camera #2 Frame #131===================
17-02-28 20:53:26.787 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:26.905 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:53:26.905 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:53:26.905 -08 000000038 INF: ===================Camera #0 Frame #136===================
17-02-28 20:53:26.912 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:26.932 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:53:26.932 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:53:26.932 -08 000000096 INF: ===================Camera #2 Frame #137===================
17-02-28 20:53:27.047 -08 000000072 INF: Y Motor: Unshifted Position: 3458073
17-02-28 20:53:27.073 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:53:27.073 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:53:27.073 -08 000000038 INF: ===================Camera #0 Frame #143===================
17-02-28 20:53:27.097 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:27.104 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:53:27.104 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:53:27.104 -08 000000096 INF: ===================Camera #2 Frame #144===================
17-02-28 20:53:27.223 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:27.244 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:53:27.244 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:53:27.244 -08 000000038 INF: ===================Camera #0 Frame #149===================
17-02-28 20:53:27.281 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:53:27.281 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:53:27.281 -08 000000096 INF: ===================Camera #2 Frame #150===================
17-02-28 20:53:27.327 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:27.327 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left===================
17-02-28 20:53:27.361 -08 000000072 INF: Y Motor: Unshifted Position: 3257224
17-02-28 20:53:27.411 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:27.412 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:53:27.412 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:53:27.412 -08 000000038 INF: ===================Camera #0 Frame #155===================
17-02-28 20:53:27.455 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:53:27.455 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:53:27.455 -08 000000096 INF: ===================Camera #2 Frame #157===================
17-02-28 20:53:27.536 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:27.582 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:53:27.582 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:53:27.582 -08 000000038 INF: ===================Camera #0 Frame #161===================
17-02-28 20:53:27.631 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:53:27.631 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:53:27.631 -08 000000096 INF: ===================Camera #2 Frame #163===================
17-02-28 20:53:27.671 -08 000000072 INF: Y Motor: Unshifted Position: 3051610
17-02-28 20:53:27.672 -08 000000027 INF: RunCopyService queue size at 2/28/2017 8:53:27 PM is 0
17-02-28 20:53:27.721 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:27.812 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:53:27.812 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:53:27.812 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:53:27.812 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:53:27.813 -08 000000096 INF: ===================Camera #2 Frame #170===================
17-02-28 20:53:27.813 -08 000000038 INF: ===================Camera #0 Frame #170===================
17-02-28 20:53:27.865 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:27.985 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:53:27.985 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:53:27.985 -08 000000096 INF: ===================Camera #2 Frame #176===================
17-02-28 20:53:27.991 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:53:27.991 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:53:27.991 -08 000000038 INF: ===================Camera #0 Frame #176===================
17-02-28 20:53:28.000 -08 000000072 INF: Y Motor: Unshifted Position: 2840368
17-02-28 20:53:28.050 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:28.158 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:53:28.158 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:53:28.158 -08 000000096 INF: ===================Camera #2 Frame #183===================
17-02-28 20:53:28.160 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:53:28.160 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:53:28.160 -08 000000038 INF: ===================Camera #0 Frame #183===================
17-02-28 20:53:28.174 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:28.314 -08 000000072 INF: Y Motor: Unshifted Position: 2638644
17-02-28 20:53:28.327 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:28.327 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:28.327 -08 000000018 INF: WaitCommand(10000) end
17-02-28 20:53:28.327 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:28.328 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Deblock===================
17-02-28 20:53:28.328 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle===================
17-02-28 20:53:28.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:28.330 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:53:28.330 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:53:28.330 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:28.330 -08 000000096 INF: ===================Camera #2 Frame #189===================
17-02-28 20:53:28.330 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:28.330 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:28.332 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:53:28.332 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:53:28.332 -08 000000038 INF: ===================Camera #0 Frame #189===================
17-02-28 20:53:28.364 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:28.373 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:28.373 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-02-28 20:53:28.373 -08 000000018 INF: Valve A1: Go to position 4
17-02-28 20:53:28.373 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:53:28.434 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-02-28 20:53:28.434 -08 000000018 INF: Valve A1: 38.465 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:53:28.434 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 7 to 4
17-02-28 20:53:28.434 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC4\r
17-02-28 20:53:28.434 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:53:28.434 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:53:28.485 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:28.502 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:53:28.502 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:53:28.502 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:53:28.502 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:53:28.502 -08 000000038 INF: ===================Camera #0 Frame #195===================
17-02-28 20:53:28.502 -08 000000096 INF: ===================Camera #2 Frame #195===================
17-02-28 20:53:28.624 -08 000000072 INF: Y Motor: Unshifted Position: 2434556
17-02-28 20:53:28.670 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:53:28.670 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:53:28.670 -08 000000038 INF: ===================Camera #0 Frame #201===================
17-02-28 20:53:28.673 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:53:28.673 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:53:28.673 -08 000000096 INF: ===================Camera #2 Frame #201===================
17-02-28 20:53:28.674 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:28.798 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:28.841 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:53:28.841 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:53:28.841 -08 000000038 INF: ===================Camera #0 Frame #208===================
17-02-28 20:53:28.845 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:53:28.845 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:53:28.845 -08 000000096 INF: ===================Camera #2 Frame #208===================
17-02-28 20:53:28.873 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-02-28 20:53:28.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:28.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:53:28.934 -08 000000072 INF: Y Motor: Unshifted Position: 2232843
17-02-28 20:53:28.984 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:29.012 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:53:29.012 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:53:29.012 -08 000000038 INF: ===================Camera #0 Frame #214===================
17-02-28 20:53:29.019 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:53:29.019 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:53:29.019 -08 000000096 INF: ===================Camera #2 Frame #214===================
17-02-28 20:53:29.111 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:29.182 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:53:29.182 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:53:29.182 -08 000000038 INF: ===================Camera #0 Frame #220===================
17-02-28 20:53:29.191 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:53:29.191 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:53:29.191 -08 000000096 INF: ===================Camera #2 Frame #221===================
17-02-28 20:53:29.247 -08 000000072 INF: Y Motor: Unshifted Position: 2029168
17-02-28 20:53:29.297 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:29.353 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:53:29.353 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:53:29.353 -08 000000038 INF: ===================Camera #0 Frame #227===================
17-02-28 20:53:29.367 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:53:29.367 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:53:29.367 -08 000000096 INF: ===================Camera #2 Frame #227===================
17-02-28 20:53:29.421 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:29.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:29.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:29.494 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:29.525 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:53:29.525 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:53:29.525 -08 000000038 INF: ===================Camera #0 Frame #233===================
17-02-28 20:53:29.541 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:53:29.541 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:53:29.541 -08 000000096 INF: ===================Camera #2 Frame #233===================
17-02-28 20:53:29.560 -08 000000072 INF: Y Motor: Unshifted Position: 1825714
17-02-28 20:53:29.560 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:29.568 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:53:29.610 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:29.660 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:53:29.694 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:53:29.694 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:53:29.694 -08 000000038 INF: ===================Camera #0 Frame #239===================
17-02-28 20:53:29.713 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:53:29.713 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:53:29.713 -08 000000096 INF: ===================Camera #2 Frame #240===================
17-02-28 20:53:29.734 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:29.745 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:53:29.745 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:53:29.845 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:53:29.864 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:53:29.864 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:53:29.864 -08 000000038 INF: ===================Camera #0 Frame #245===================
17-02-28 20:53:29.870 -08 000000072 INF: Y Motor: Unshifted Position: 1624222
17-02-28 20:53:29.889 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:53:29.889 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:53:29.889 -08 000000096 INF: ===================Camera #2 Frame #246===================
17-02-28 20:53:29.920 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:29.934 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:30.033 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:53:30.033 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:53:30.033 -08 000000038 INF: ===================Camera #0 Frame #252===================
17-02-28 20:53:30.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:30.047 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:30.062 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:53:30.062 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:53:30.062 -08 000000096 INF: ===================Camera #2 Frame #253===================
17-02-28 20:53:30.120 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:30.183 -08 000000072 INF: Y Motor: Unshifted Position: 1420542
17-02-28 20:53:30.207 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:53:30.207 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:53:30.207 -08 000000038 INF: ===================Camera #0 Frame #258===================
17-02-28 20:53:30.233 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:30.236 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:53:30.236 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:53:30.236 -08 000000096 INF: ===================Camera #2 Frame #259===================
17-02-28 20:53:30.357 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:30.370 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:30.378 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:53:30.378 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:53:30.378 -08 000000038 INF: ===================Camera #0 Frame #264===================
17-02-28 20:53:30.409 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:53:30.409 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:53:30.409 -08 000000096 INF: ===================Camera #2 Frame #265===================
17-02-28 20:53:30.431 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:30.494 -08 000000072 INF: Y Motor: Unshifted Position: 1218177
17-02-28 20:53:30.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:53:30.544 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:30.548 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:53:30.548 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:53:30.548 -08 000000038 INF: ===================Camera #0 Frame #271===================
17-02-28 20:53:30.582 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:30.582 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:30.582 -08 000000096 INF: ===================Camera #2 Frame #272===================
17-02-28 20:53:30.607 -08 000000096 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:30.608 -08 000000096 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:30.619 -08 000000064 INF: FPGA: Recv TDIYWAIT
17-02-28 20:53:30.619 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:30.620 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:30.621 -08 000000095 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:53:30.621 -08 000000118 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:53:30.621 -08 000000052 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:53:30.622 -08 000000118 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:53:30.622 -08 000000118 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:53:30.622 -08 000000118 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:53:30.622 -08 000000118 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:53:30.622 -08 000000052 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:53:30.622 -08 000000052 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:53:30.622 -08 000000052 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:53:30.623 -08 000000052 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:53:30.671 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:30.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:30.806 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:30.806 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:53:30.807 -08 000000072 INF: Y Motor: Unshifted Position: 1013434
17-02-28 20:53:30.829 -08 000000096 INF: Camera #2 ReleaseBuffer
17-02-28 20:53:30.829 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:30.829 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:30.829 -08 000000096 INF: ===================Camera TDI===================
17-02-28 20:53:30.829 -08 000000038 INF: ===================Camera #0 Frame #272===================
17-02-28 20:53:30.832 -08 000000038 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:30.833 -08 000000038 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:30.857 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:30.862 -08 000000096 INF: ======================================
17-02-28 20:53:30.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP15360R\r
17-02-28 20:53:30.993 -08 000000061 INF: FPGA: Recv EX1MV
17-02-28 20:53:30.993 -08 000000061 INF: FPGA: Recv EX2MV
17-02-28 20:53:30.993 -08 000000052 INF: Excitation Filter 2: Moved 107 steps in 371.3767 ms
17-02-28 20:53:30.993 -08 000000118 INF: Excitation Filter 1: Moved 107 steps in 371.5816 ms
17-02-28 20:53:30.993 -08 000000052 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.49 ms
17-02-28 20:53:30.993 -08 000000052 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.6709 ms
17-02-28 20:53:30.993 -08 000000118 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.7458 ms
17-02-28 20:53:30.993 -08 000000118 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9215 ms
17-02-28 20:53:30.994 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:30.994 -08 000000052 INF: ======================================
17-02-28 20:53:30.994 -08 000000118 INF: ======================================
17-02-28 20:53:30.995 -08 000000072 INF: Y Motor: Unshifted Position: 991304
17-02-28 20:53:30.995 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:30.995 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:30.995 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:30.996 -08 000000095 INF: ======================================
17-02-28 20:53:31.004 -08 000000038 INF: Camera #0 ReleaseBuffer
17-02-28 20:53:31.004 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:53:31.039 -08 000000038 INF: ======================================
17-02-28 20:53:31.040 -08 000000129 INF: ===================Camera TDI===================
17-02-28 20:53:31.041 -08 000000129 INF: ======================================
17-02-28 20:53:31.058 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:53:31.058 -08 000000072 INF: Y Motor: Moved to 14.9130 after 7878 ms
17-02-28 20:53:31.058 -08 000000072 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:31.094 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:31.121 -08 000000072 INF: Y Motor: Recv v 4097\r
17-02-28 20:53:31.121 -08 000000072 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:31.121 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:31.182 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:31.183 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:53:31.183 -08 000000072 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:31.183 -08 000000072 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:31.246 -08 000000072 INF: Y Motor: Recv v 134217728\r
17-02-28 20:53:31.246 -08 000000072 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:53:31.246 -08 000000072 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:31.246 -08 000000072 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:31.307 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:53:31.307 -08 000000072 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:31.307 -08 000000072 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:31.307 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:31.370 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:53:31.370 -08 000000072 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:31.370 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:31.431 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:53:31.431 -08 000000072 INF: ======================================
17-02-28 20:53:31.432 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:31.432 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:31.433 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:31.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:31.434 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:53:31.491 -08 000000095 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:53:31.491 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:31.492 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:31.553 -08 000000070 INF: FPGA: Recv TDIYERD 1491305
17-02-28 20:53:31.553 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:53:31.618 -08 000000097 INF: FPGA: Recv ZADCR 34991
17-02-28 20:53:31.618 -08 000000042 INF: At scan end Y pos = 14.913 and Z pos = -0.134. Y moved -48.539 mm
17-02-28 20:53:31.618 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:53:31.680 -08 000000088 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:53:31.680 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:53:31.680 -08 000000042 INF: TDIScan finished after 12847.3835 ms
17-02-28 20:53:31.680 -08 000000042 INF: Image[0]: Y should trigger at 63.452 mm, 2nd row was at 64.361 mm (error = 0.909 mm)
17-02-28 20:53:31.680 -08 000000042 INF: Image[2]: Y should trigger at 63.452 mm, 2nd row was at 64.361 mm (error = 0.909 mm)
17-02-28 20:53:31.682 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:31.715 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.586 um
17-02-28 20:53:31.715 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:31.716 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:53:31.742 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:31.742 -08 000000089 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:53:31.742 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:31.743 -08 000000051 INF: ===================Dither Clean Up Command===================
17-02-28 20:53:31.743 -08 000000093 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:53:31.743 -08 000000029 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:53:31.743 -08 000000096 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:53:31.744 -08 000000029 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:53:31.744 -08 000000093 INF: ======================================
17-02-28 20:53:31.744 -08 000000029 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:53:31.744 -08 000000096 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:53:31.744 -08 000000096 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:53:31.744 -08 000000036 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:31.744 -08 000000027 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:31.745 -08 000000036 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:53:31.747 -08 000000027 INF: ===================LFT:Extracting coords===================
17-02-28 20:53:31.772 -08 000000027 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:31.773 -08 000000027 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:53:31.774 -08 000000055 INF: ===================LookupFocusTracking===================
17-02-28 20:53:31.774 -08 000000122 INF: ===================LookupFocusTracking===================
17-02-28 20:53:31.774 -08 000000123 INF: ===================LookupFocusTracking===================
17-02-28 20:53:31.774 -08 000000072 INF: ===================LookupFocusTracking===================
17-02-28 20:53:31.774 -08 000000055 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:31.774 -08 000000122 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:31.774 -08 000000072 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:31.775 -08 000000123 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:31.805 -08 000000120 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:31.805 -08 000000120 INF: FPGA: Recv ZSEL 
17-02-28 20:53:31.805 -08 000000036 INF: FPGA: Xmit ZDACW 40454\n
17-02-28 20:53:31.805 -08 000000096 INF: ======================================
17-02-28 20:53:31.806 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:31.807 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:53:31.807 -08 000000029 INF: ======================================
17-02-28 20:53:31.848 -08 000000055 INF: FC:B, C:5,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:31.849 -08 000000072 INF: FC:B, C:5,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:31.849 -08 000000122 INF: FC:B, C:5,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:31.849 -08 000000123 INF: FC:B, C:5,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:31.867 -08 000000064 INF: FPGA: Recv ZDACW 
17-02-28 20:53:31.868 -08 000000036 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:53:31.868 -08 000000036 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:53:31.930 -08 000000029 INF: FPGA: Recv TDIBB
17-02-28 20:53:31.930 -08 000000036 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:31.932 -08 000000036 INF: ======================================
17-02-28 20:53:32.000 -08 000000072 INF: LFT found best fwhm score 2.144403 in 151 ms
17-02-28 20:53:32.000 -08 000000122 INF: LFT found best fwhm score 2.000812 in 151 ms
17-02-28 20:53:32.000 -08 000000072 INF: LFT found good score at index 7817 with fwhm value 2.144403. Next cycle, cycle 6 starting Z position for top surface is at -0.156 mm FC:B, C:5,L:3,T
17-02-28 20:53:32.000 -08 000000122 INF: LFT found good score at index 589 with fwhm value 2.000812. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:3,T
17-02-28 20:53:32.000 -08 000000123 INF: LFT found best fwhm score 2.000004 in 151 ms
17-02-28 20:53:32.000 -08 000000123 INF: LFT found good score at index 7693 with fwhm value 2.000004. Next cycle, cycle 6 starting Z position for top surface is at -0.156 mm FC:B, C:5,L:3,T
17-02-28 20:53:32.000 -08 000000072 INF: ===================LookupFocusTracking===================
17-02-28 20:53:32.000 -08 000000055 INF: LFT found best fwhm score 2.000095 in 151 ms
17-02-28 20:53:32.000 -08 000000055 INF: LFT found good score at index 8957 with fwhm value 2.000095. Next cycle, cycle 6 starting Z position for top surface is at -0.156 mm FC:B, C:5,L:3,T
17-02-28 20:53:32.000 -08 000000123 INF: ===================LookupFocusTracking===================
17-02-28 20:53:32.000 -08 000000072 INF: ======================================
17-02-28 20:53:32.000 -08 000000055 INF: ===================LookupFocusTracking===================
17-02-28 20:53:32.001 -08 000000122 INF: ===================LookupFocusTracking===================
17-02-28 20:53:32.001 -08 000000123 INF: ======================================
17-02-28 20:53:32.001 -08 000000055 INF: ======================================
17-02-28 20:53:32.001 -08 000000122 INF: ======================================
17-02-28 20:53:32.002 -08 000000027 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:32.003 -08 000000027 INF: LFT weighted average best Z for top surface is at -0.156mm FC:B, C:5,L:3,T
17-02-28 20:53:32.003 -08 000000027 INF: ======================================
17-02-28 20:53:32.004 -08 000000051 INF: ======================================
17-02-28 20:53:32.005 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:32.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:53:32.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:32.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:53:32.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:32.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:53:32.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:32.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:53:32.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:32.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:53:32.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:53:32.008 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:53:32.008 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:53:32.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:53:32.009 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:53:32.031 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:53:32.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:32.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:53:32.032 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:32.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:53:32.032 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:53:32.032 -08 000000042 INF: Transformed XStagePosition from 75.26964 mm to 75.24617806077 mm.
17-02-28 20:53:32.078 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.561024355121 mm.
17-02-28 20:53:32.078 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.361024355121 mm.
17-02-28 20:53:32.078 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.451774355121 mm.
17-02-28 20:53:32.080 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:32.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:53:32.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:32.081 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -154.3 um, section = C_1
17-02-28 20:53:32.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:32.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:32.085 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:32.085 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1102 Request: {"Cycle":5,"Lane":3,"Tile":1102,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF189","HCSMMF264","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.086 -08 000000070 INF: ===================MoveEmissionFilters===================
17-02-28 20:53:32.094 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:53:32.095 -08 000000051 INF: ===================Move X,Y, Parallel===================
17-02-28 20:53:32.105 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:32.107 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:32.108 -08 000000122 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:32.109 -08 000000122 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:53:32.109 -08 000000122 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:53:32.109 -08 000000122 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:32.110 -08 000000129 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:32.110 -08 000000122 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:53:32.111 -08 000000031 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:53:32.111 -08 000000129 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:32.111 -08 000000031 INF: ======================================
17-02-28 20:53:32.112 -08 000000087 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:32.112 -08 000000087 INF: Y Motor: Moving to 64.5610 mm @25.000 mm/sec, started at 14.9130 mm
17-02-28 20:53:32.112 -08 000000072 INF: ===================Move X Motor without settling===================
17-02-28 20:53:32.112 -08 000000072 INF: X Motor: Xmit PR VM\n
17-02-28 20:53:32.112 -08 000000087 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:32.112 -08 000000087 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:32.113 -08 000000031 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:32.113 -08 000000027 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:53:32.113 -08 000000027 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:53:32.114 -08 000000031 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:32.114 -08 000000027 INF: ======================================
17-02-28 20:53:32.115 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:32.116 -08 000000120 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:32.116 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:53:32.116 -08 000000027 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:53:32.116 -08 000000077 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:53:32.116 -08 000000120 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:32.117 -08 000000027 INF: ======================================
17-02-28 20:53:32.117 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:32.117 -08 000000077 INF: ======================================
17-02-28 20:53:32.118 -08 000000089 INF: ======================================
17-02-28 20:53:32.118 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:32.119 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:32.119 -08 000000064 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:53:32.122 -08 000000123 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:53:32.122 -08 000000038 INF: ===================Camera Arm TDI===================
17-02-28 20:53:32.123 -08 000000123 INF: ======================================
17-02-28 20:53:32.123 -08 000000089 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:53:32.124 -08 000000089 INF: ======================================
17-02-28 20:53:32.124 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:32.125 -08 000000031 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:32.126 -08 000000031 INF: ======================================
17-02-28 20:53:32.126 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:32.127 -08 000000129 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:32.128 -08 000000129 INF: ======================================
17-02-28 20:53:32.129 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:32.137 -08 000000095 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:53:32.138 -08 000000095 INF: ======================================
17-02-28 20:53:32.141 -08 000000063 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:53:32.145 -08 000000063 INF: ======================================
17-02-28 20:53:32.149 -08 000000120 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:32.150 -08 000000120 INF: ======================================
17-02-28 20:53:32.152 -08 000000070 INF: ======================================
17-02-28 20:53:32.163 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1105 Request: {"Cycle":5,"Lane":3,"Tile":1105,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF256","HCSMMF243","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.165 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1101 Request: {"Cycle":5,"Lane":3,"Tile":1101,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF183","HCSMMF178","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.168 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1107 Request: {"Cycle":5,"Lane":3,"Tile":1107,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF251","HCSMMF248","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.171 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1113 Request: {"Cycle":5,"Lane":3,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF247","HCSMMF246","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.173 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1106 Request: {"Cycle":5,"Lane":3,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF210","HCSMMF282","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.180 -08 000000063 INF: FPGA: Recv ZSEL 
17-02-28 20:53:32.181 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1104 Request: {"Cycle":5,"Lane":3,"Tile":1104,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF253","HCSMMF269","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.182 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:32.183 -08 000000064 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:53:32.187 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1108 Request: {"Cycle":5,"Lane":3,"Tile":1108,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF224","HCSMMF207","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.189 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:53:32.189 -08 000000087 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:32.189 -08 000000087 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:32.191 -08 000000072 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:53:32.191 -08 000000072 INF: X Motor: Xmit PR VI\n
17-02-28 20:53:32.202 -08 000000124 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1103 Request: {"Cycle":5,"Lane":3,"Tile":1103,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF190","HCSMMF180","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.206 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1114 Request: {"Cycle":5,"Lane":3,"Tile":1114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF238","HCSMMF283","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.214 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1111 Request: {"Cycle":5,"Lane":3,"Tile":1111,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF271","HCSMMF184","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.216 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1110 Request: {"Cycle":5,"Lane":3,"Tile":1110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF239","HCSMMF285","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.226 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1112 Request: {"Cycle":5,"Lane":3,"Tile":1112,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF205","HCSMMF211","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.235 -08 000000119 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1109 Request: {"Cycle":5,"Lane":3,"Tile":1109,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF228","HCSMMF255","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.237 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1116 Request: {"Cycle":5,"Lane":3,"Tile":1116,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF257","HCSMMF278","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.238 -08 000000126 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1115 Request: {"Cycle":5,"Lane":3,"Tile":1115,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF272","HCSMMF209","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.240 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1118 Request: {"Cycle":5,"Lane":3,"Tile":1118,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF199","HCSMMF191","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.241 -08 000000129 INF: FPGA: Recv TDIBB
17-02-28 20:53:32.241 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1117 Request: {"Cycle":5,"Lane":3,"Tile":1117,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF287","HCSMMF204","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.241 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:32.243 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:53:32.243 -08 000000072 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:53:32.243 -08 000000072 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:53:32.243 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:32.243 -08 000000072 INF: X Motor: Moving to 75.2462 mm @15.000 mm/sec, started at 74.1465 mm
17-02-28 20:53:32.243 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:32.243 -08 000000072 INF: X Motor: Xmit MA 6654\n
17-02-28 20:53:32.243 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1119 Request: {"Cycle":5,"Lane":3,"Tile":1119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF221","HCSMMF273","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.243 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:32.245 -08 000000064 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:53:32.245 -08 000000064 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:53:32.245 -08 000000064 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:53:32.246 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1120 Request: {"Cycle":5,"Lane":3,"Tile":1120,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF187","HCSMMF227","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.248 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1124 Request: {"Cycle":5,"Lane":3,"Tile":1124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF214","HCSMMF213","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.258 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1123 Request: {"Cycle":5,"Lane":3,"Tile":1123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF270","HCSMMF235","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.267 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1126 Request: {"Cycle":5,"Lane":3,"Tile":1126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF281","HCSMMF200","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.274 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1122 Request: {"Cycle":5,"Lane":3,"Tile":1122,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF222","HCSMMF177","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.284 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1121 Request: {"Cycle":5,"Lane":3,"Tile":1121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF265","HCSMMF220","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.287 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1128 Request: {"Cycle":5,"Lane":3,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF249","HCSMMF242","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.291 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1127 Request: {"Cycle":5,"Lane":3,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF277","HCSMMF202","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.299 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1125 Request: {"Cycle":5,"Lane":3,"Tile":1125,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF208","HCSMMF176","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:32.303 -08 000000120 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:32.303 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:32.304 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:32.305 -08 000000072 INF: X Motor: Recv MA 6654\r\n>
17-02-28 20:53:32.305 -08 000000072 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:53:32.305 -08 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:53:32.306 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:53:32.306 -08 000000087 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:32.306 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:32.306 -08 000000087 INF: Y Motor: Set target position to 5956102 encoder counts
17-02-28 20:53:32.306 -08 000000087 INF: Y Motor: Xmit s r0xca 5956102\r
17-02-28 20:53:32.307 -08 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:53:32.307 -08 000000064 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:53:32.307 -08 000000064 INF: Z Motor: Arming to move to -0.1143 mm
17-02-28 20:53:32.308 -08 000000064 INF: FPGA: Xmit ZYT 6436102 4\n
17-02-28 20:53:32.311 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:53:32.366 -08 000000094 INF: FPGA: Recv ZYT 
17-02-28 20:53:32.366 -08 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1491304 enc / 14.913 mm / ) = 6436102 enc / 64.361 mm
17-02-28 20:53:32.366 -08 000000064 INF: FPGA: Xmit ZARM 29968\n
17-02-28 20:53:32.368 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:53:32.368 -08 000000087 INF: Y Motor: Start the move command
17-02-28 20:53:32.368 -08 000000087 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:32.387 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:32.394 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:32.394 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:53:32.427 -08 000000124 INF: FPGA: Recv ZARM
17-02-28 20:53:32.427 -08 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.0227 ms
17-02-28 20:53:32.427 -08 000000064 INF: Z Motor: ArmAbsStepped took 119.5436 ms
17-02-28 20:53:32.427 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:32.428 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:32.429 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:53:32.429 -08 000000087 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:53:32.429 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:32.429 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:53:32.430 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:32.430 -08 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:53:32.431 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:53:32.432 -08 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:53:32.433 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:53:32.434 -08 000000064 INF: ======================================
17-02-28 20:53:32.435 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:53:32.555 -08 000000087 INF: Y Motor: Unshifted Position: 1076245
17-02-28 20:53:32.605 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:32.658 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:32.663 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:53:32.678 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:32.730 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:32.739 -08 000000038 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:32.739 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:32.739 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:32.742 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:32.754 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:32.756 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:32.767 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:32.772 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:53:32.857 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:32.866 -08 000000087 INF: Y Motor: Unshifted Position: 1777969
17-02-28 20:53:32.916 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:32.930 -08 000000072 INF: X Motor: Xmit PR ER\n
17-02-28 20:53:32.993 -08 000000072 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:53:32.993 -08 000000072 INF: X Motor: Moved to 75.2451 after 688 ms
17-02-28 20:53:32.993 -08 000000072 INF: ======================================
17-02-28 20:53:32.994 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:33.044 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:33.053 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:33.136 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:53:33.179 -08 000000087 INF: Y Motor: Unshifted Position: 2560487
17-02-28 20:53:33.229 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:33.303 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:33.352 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:33.357 -08 000000038 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:33.357 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:33.358 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:33.365 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:33.374 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:33.375 -08 000000038 INF: ===================Camera Arm TDI===================
17-02-28 20:53:33.377 -08 000000038 INF: ======================================
17-02-28 20:53:33.379 -08 000000122 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:33.381 -08 000000122 INF: ======================================
17-02-28 20:53:33.491 -08 000000087 INF: Y Motor: Unshifted Position: 3341263
17-02-28 20:53:33.541 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:33.615 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:33.667 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:33.678 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:33.802 -08 000000087 INF: Y Motor: Unshifted Position: 4118840
17-02-28 20:53:33.852 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:33.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:33.978 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:33.989 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:34.124 -08 000000087 INF: Y Motor: Unshifted Position: 4899606
17-02-28 20:53:34.174 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:34.239 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:34.291 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:34.300 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:34.425 -08 000000087 INF: Y Motor: Unshifted Position: 5676045
17-02-28 20:53:34.475 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:34.550 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:34.600 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:34.615 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:34.737 -08 000000087 INF: Y Motor: Unshifted Position: 5956104
17-02-28 20:53:34.787 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:34.865 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:34.924 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:34.925 -08 000000087 INF: Y Motor: Unshifted Position: 5956103
17-02-28 20:53:34.925 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:34.925 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:34.989 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:53:34.989 -08 000000087 INF: Y Motor: Moved to 64.5610 after 2560 ms
17-02-28 20:53:34.989 -08 000000087 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:35.051 -08 000000087 INF: Y Motor: Recv v 4096\r
17-02-28 20:53:35.051 -08 000000087 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:35.051 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:35.114 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:53:35.114 -08 000000087 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:35.114 -08 000000087 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:35.174 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:35.177 -08 000000087 INF: Y Motor: Recv v 402653184\r
17-02-28 20:53:35.177 -08 000000087 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:53:35.177 -08 000000087 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:35.177 -08 000000087 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:35.237 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:35.238 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:53:35.238 -08 000000087 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:35.238 -08 000000087 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:35.238 -08 000000087 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:35.299 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:53:35.299 -08 000000087 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:35.299 -08 000000087 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:35.361 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:53:35.361 -08 000000087 INF: ======================================
17-02-28 20:53:35.362 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:53:35.363 -08 000000051 INF: ======================================
17-02-28 20:53:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:35.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:35.365 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:53:35.365 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:53:35.426 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:53:35.426 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:53:35.484 -08 000000123 INF: FPGA: Recv ZFREQCL
17-02-28 20:53:35.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:53:35.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:35.485 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:35.487 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:35.548 -08 000000029 INF: FPGA: Recv TDIYERD 6456103
17-02-28 20:53:35.549 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:35.549 -08 000000042 INF: Before scan, Y encoder from FPGA = 6456103 counts (64.561 mm)
17-02-28 20:53:35.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:35.550 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:35.550 -08 000000124 INF: ===================TDI FPGA Arm===================
17-02-28 20:53:35.551 -08 000000055 INF: ===================Set YMotor gains for scans===================
17-02-28 20:53:35.551 -08 000000055 INF: ======================================
17-02-28 20:53:35.551 -08 000000124 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:35.552 -08 000000124 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:53:35.552 -08 000000124 INF: FPGA: Xmit TDIYPOS 6345177\n
17-02-28 20:53:35.610 -08 000000104 INF: FPGA: Recv TDIYPOS
17-02-28 20:53:35.611 -08 000000124 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:35.612 -08 000000124 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:53:35.613 -08 000000124 INF: FPGA: Xmit TDIYARM3 139264 6436102 1 1\n
17-02-28 20:53:35.673 -08 000000036 INF: FPGA: Recv TDIYARM3
17-02-28 20:53:35.673 -08 000000124 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:35.674 -08 000000124 INF: ===================TDI FPGA Arm===================
17-02-28 20:53:35.676 -08 000000124 INF: ======================================
17-02-28 20:53:35.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:35.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:35.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:35.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:35.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:35.680 -08 000000096 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:53:35.680 -08 000000096 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:53:35.680 -08 000000096 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:53:35.681 -08 000000126 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:53:35.681 -08 000000096 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:53:35.681 -08 000000126 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:53:35.681 -08 000000096 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:53:35.681 -08 000000126 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:53:35.681 -08 000000126 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:53:35.682 -08 000000126 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:53:35.799 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:35.860 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:36.049 -08 000000111 INF: FPGA: Recv EX1MV
17-02-28 20:53:36.050 -08 000000111 INF: FPGA: Recv EX2MV
17-02-28 20:53:36.050 -08 000000126 INF: Excitation Filter 2: Moved -107 steps in 368.7037 ms
17-02-28 20:53:36.050 -08 000000096 INF: Excitation Filter 1: Moved -107 steps in 369.133 ms
17-02-28 20:53:36.050 -08 000000126 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.9672 ms
17-02-28 20:53:36.050 -08 000000096 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.2991 ms
17-02-28 20:53:36.050 -08 000000126 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.1493 ms
17-02-28 20:53:36.050 -08 000000096 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.4067 ms
17-02-28 20:53:36.050 -08 000000126 INF: ======================================
17-02-28 20:53:36.050 -08 000000096 INF: ======================================
17-02-28 20:53:36.051 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:36.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:36.053 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:53:36.053 -08 000000070 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:36.053 -08 000000061 INF: ===================FPGA Z Wait===================
17-02-28 20:53:36.053 -08 000000120 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:36.054 -08 000000120 INF: Y Motor: Moving to 14.9127 mm @6.500 mm/sec, started at 64.5610 mm
17-02-28 20:53:36.054 -08 000000120 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:36.054 -08 000000120 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:36.054 -08 000000095 INF: ===================Camera TDI, Parallel===================
17-02-28 20:53:36.054 -08 000000070 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:53:36.054 -08 000000070 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:53:36.055 -08 000000094 INF: ===================Camera TDI===================
17-02-28 20:53:36.055 -08 000000027 INF: ===================Camera TDI===================
17-02-28 20:53:36.056 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:36.056 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:36.057 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:36.057 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:36.057 -08 000000061 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:53:36.111 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:53:36.111 -08 000000120 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:36.111 -08 000000120 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:36.112 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:36.174 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:36.175 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:53:36.175 -08 000000120 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:36.206 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:36.206 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:36.207 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:36.207 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:36.238 -08 000000120 INF: Y Motor: Recv v 0\r
17-02-28 20:53:36.238 -08 000000120 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:36.238 -08 000000120 INF: Y Motor: Set target position to 991269 encoder counts
17-02-28 20:53:36.238 -08 000000120 INF: Y Motor: Xmit s r0xca 991269\r
17-02-28 20:53:36.299 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:53:36.299 -08 000000120 INF: Y Motor: Start the move command
17-02-28 20:53:36.299 -08 000000120 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:36.356 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:36.356 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:36.357 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:36.357 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:36.361 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:53:36.361 -08 000000120 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:53:36.361 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:36.424 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:36.425 -08 000000111 INF: FPGA: Recv ZWAIT 
17-02-28 20:53:36.427 -08 000000061 INF: ======================================
17-02-28 20:53:36.484 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:36.485 -08 000000120 INF: Y Motor: Unshifted Position: 5887101
17-02-28 20:53:36.507 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:53:36.507 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:53:36.507 -08 000000094 INF: ===================Camera #2 Frame #5===================
17-02-28 20:53:36.508 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:53:36.508 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:53:36.508 -08 000000027 INF: ===================Camera #0 Frame #5===================
17-02-28 20:53:36.535 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:36.661 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:36.673 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:53:36.673 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:53:36.673 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:53:36.673 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:53:36.673 -08 000000027 INF: ===================Camera #0 Frame #11===================
17-02-28 20:53:36.673 -08 000000094 INF: ===================Camera #2 Frame #11===================
17-02-28 20:53:36.734 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:36.798 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:36.799 -08 000000120 INF: Y Motor: Unshifted Position: 5690802
17-02-28 20:53:36.846 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:53:36.846 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:53:36.846 -08 000000094 INF: ===================Camera #2 Frame #17===================
17-02-28 20:53:36.847 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:53:36.847 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:53:36.847 -08 000000027 INF: ===================Camera #0 Frame #17===================
17-02-28 20:53:36.849 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:36.972 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:37.019 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:53:37.019 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:53:37.019 -08 000000094 INF: ===================Camera #2 Frame #23===================
17-02-28 20:53:37.024 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:53:37.024 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:53:37.024 -08 000000027 INF: ===================Camera #0 Frame #24===================
17-02-28 20:53:37.048 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:37.109 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:37.110 -08 000000120 INF: Y Motor: Unshifted Position: 5488444
17-02-28 20:53:37.160 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:37.189 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:53:37.189 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:53:37.189 -08 000000094 INF: ===================Camera #2 Frame #30===================
17-02-28 20:53:37.202 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:53:37.202 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:53:37.202 -08 000000027 INF: ===================Camera #0 Frame #30===================
17-02-28 20:53:37.285 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:37.359 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:37.372 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:53:37.372 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:53:37.372 -08 000000094 INF: ===================Camera #2 Frame #36===================
17-02-28 20:53:37.378 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:53:37.378 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:53:37.378 -08 000000027 INF: ===================Camera #0 Frame #37===================
17-02-28 20:53:37.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:37.423 -08 000000120 INF: Y Motor: Unshifted Position: 5284338
17-02-28 20:53:37.473 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:37.550 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:53:37.550 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:53:37.550 -08 000000094 INF: ===================Camera #2 Frame #43===================
17-02-28 20:53:37.559 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:53:37.559 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:53:37.559 -08 000000027 INF: ===================Camera #0 Frame #43===================
17-02-28 20:53:37.596 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:37.672 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:37.722 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:53:37.722 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:53:37.722 -08 000000094 INF: ===================Camera #2 Frame #49===================
17-02-28 20:53:37.728 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:53:37.728 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:53:37.728 -08 000000027 INF: ===================Camera #0 Frame #50===================
17-02-28 20:53:37.733 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:37.736 -08 000000120 INF: Y Motor: Unshifted Position: 5082829
17-02-28 20:53:37.786 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:37.891 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:53:37.891 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:53:37.891 -08 000000094 INF: ===================Camera #2 Frame #56===================
17-02-28 20:53:37.899 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:53:37.899 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:53:37.899 -08 000000027 INF: ===================Camera #0 Frame #56===================
17-02-28 20:53:37.912 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:37.983 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:38.046 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:38.047 -08 000000120 INF: Y Motor: Unshifted Position: 4879165
17-02-28 20:53:38.063 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:53:38.063 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:53:38.063 -08 000000094 INF: ===================Camera #2 Frame #62===================
17-02-28 20:53:38.067 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:53:38.067 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:53:38.067 -08 000000027 INF: ===================Camera #0 Frame #62===================
17-02-28 20:53:38.097 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:38.220 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:38.232 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:53:38.232 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:53:38.232 -08 000000094 INF: ===================Camera #2 Frame #68===================
17-02-28 20:53:38.235 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:53:38.235 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:53:38.235 -08 000000027 INF: ===================Camera #0 Frame #68===================
17-02-28 20:53:38.296 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:38.357 -08 000000120 INF: Y Motor: Unshifted Position: 4675497
17-02-28 20:53:38.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:38.401 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:53:38.401 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:53:38.401 -08 000000094 INF: ===================Camera #2 Frame #74===================
17-02-28 20:53:38.403 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:53:38.403 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:53:38.403 -08 000000027 INF: ===================Camera #0 Frame #74===================
17-02-28 20:53:38.407 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:38.533 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:38.571 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:53:38.571 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:53:38.571 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:53:38.571 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:53:38.571 -08 000000094 INF: ===================Camera #2 Frame #81===================
17-02-28 20:53:38.571 -08 000000027 INF: ===================Camera #0 Frame #81===================
17-02-28 20:53:38.607 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:38.671 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:38.671 -08 000000120 INF: Y Motor: Unshifted Position: 4473340
17-02-28 20:53:38.721 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:38.743 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:53:38.743 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:53:38.743 -08 000000027 INF: ===================Camera #0 Frame #87===================
17-02-28 20:53:38.744 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:53:38.744 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:53:38.744 -08 000000094 INF: ===================Camera #2 Frame #87===================
17-02-28 20:53:38.844 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:38.911 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:53:38.911 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:53:38.911 -08 000000027 INF: ===================Camera #0 Frame #93===================
17-02-28 20:53:38.913 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:53:38.913 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:53:38.913 -08 000000094 INF: ===================Camera #2 Frame #93===================
17-02-28 20:53:38.921 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:38.980 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:38.981 -08 000000120 INF: Y Motor: Unshifted Position: 4271622
17-02-28 20:53:39.031 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:39.080 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:53:39.080 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:53:39.080 -08 000000027 INF: ===================Camera #0 Frame #99===================
17-02-28 20:53:39.082 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:53:39.082 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:53:39.082 -08 000000094 INF: ===================Camera #2 Frame #99===================
17-02-28 20:53:39.158 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:39.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:39.248 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:53:39.248 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:53:39.248 -08 000000027 INF: ===================Camera #0 Frame #106===================
17-02-28 20:53:39.251 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:53:39.251 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:53:39.251 -08 000000094 INF: ===================Camera #2 Frame #106===================
17-02-28 20:53:39.294 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:39.294 -08 000000120 INF: Y Motor: Unshifted Position: 4068170
17-02-28 20:53:39.344 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:39.419 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:53:39.419 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:53:39.419 -08 000000027 INF: ===================Camera #0 Frame #112===================
17-02-28 20:53:39.423 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:53:39.423 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:53:39.423 -08 000000094 INF: ===================Camera #2 Frame #112===================
17-02-28 20:53:39.469 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:39.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:39.587 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:53:39.587 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:53:39.587 -08 000000027 INF: ===================Camera #0 Frame #118===================
17-02-28 20:53:39.592 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:53:39.592 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:53:39.592 -08 000000094 INF: ===================Camera #2 Frame #118===================
17-02-28 20:53:39.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:39.607 -08 000000120 INF: Y Motor: Unshifted Position: 3865804
17-02-28 20:53:39.657 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:39.756 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:53:39.756 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:53:39.756 -08 000000027 INF: ===================Camera #0 Frame #124===================
17-02-28 20:53:39.761 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:53:39.761 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:53:39.761 -08 000000094 INF: ===================Camera #2 Frame #124===================
17-02-28 20:53:39.782 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:39.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:39.918 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:39.919 -08 000000120 INF: Y Motor: Unshifted Position: 3663003
17-02-28 20:53:39.924 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:53:39.924 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:53:39.924 -08 000000027 INF: ===================Camera #0 Frame #130===================
17-02-28 20:53:39.930 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:53:39.930 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:53:39.930 -08 000000094 INF: ===================Camera #2 Frame #131===================
17-02-28 20:53:39.969 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:40.093 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:40.093 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:53:40.093 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:53:40.093 -08 000000027 INF: ===================Camera #0 Frame #137===================
17-02-28 20:53:40.103 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:53:40.103 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:53:40.103 -08 000000094 INF: ===================Camera #2 Frame #137===================
17-02-28 20:53:40.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:40.228 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:40.229 -08 000000120 INF: Y Motor: Unshifted Position: 3459989
17-02-28 20:53:40.264 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:53:40.264 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:53:40.264 -08 000000027 INF: ===================Camera #0 Frame #143===================
17-02-28 20:53:40.272 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:53:40.272 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:53:40.272 -08 000000094 INF: ===================Camera #2 Frame #143===================
17-02-28 20:53:40.279 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:40.406 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:40.432 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:53:40.432 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:53:40.432 -08 000000027 INF: ===================Camera #0 Frame #149===================
17-02-28 20:53:40.441 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:53:40.441 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:53:40.441 -08 000000094 INF: ===================Camera #2 Frame #149===================
17-02-28 20:53:40.478 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:40.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:40.543 -08 000000120 INF: Y Motor: Unshifted Position: 3255884
17-02-28 20:53:40.593 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:40.600 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:53:40.600 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:53:40.600 -08 000000027 INF: ===================Camera #0 Frame #155===================
17-02-28 20:53:40.610 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:53:40.610 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:53:40.610 -08 000000094 INF: ===================Camera #2 Frame #156===================
17-02-28 20:53:40.717 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:40.768 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:53:40.768 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:53:40.768 -08 000000027 INF: ===================Camera #0 Frame #161===================
17-02-28 20:53:40.782 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:53:40.782 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:53:40.782 -08 000000094 INF: ===================Camera #2 Frame #162===================
17-02-28 20:53:40.792 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:40.852 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:40.853 -08 000000120 INF: Y Motor: Unshifted Position: 3053525
17-02-28 20:53:40.903 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:40.936 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:53:40.936 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:53:40.936 -08 000000027 INF: ===================Camera #0 Frame #168===================
17-02-28 20:53:40.951 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:53:40.951 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:53:40.951 -08 000000094 INF: ===================Camera #2 Frame #168===================
17-02-28 20:53:41.031 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:41.102 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:41.107 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:53:41.107 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:53:41.107 -08 000000027 INF: ===================Camera #0 Frame #174===================
17-02-28 20:53:41.121 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:53:41.121 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:53:41.121 -08 000000094 INF: ===================Camera #2 Frame #174===================
17-02-28 20:53:41.166 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:41.167 -08 000000120 INF: Y Motor: Unshifted Position: 2850081
17-02-28 20:53:41.217 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:41.276 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:53:41.276 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:53:41.276 -08 000000027 INF: ===================Camera #0 Frame #180===================
17-02-28 20:53:41.293 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:53:41.293 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:53:41.293 -08 000000094 INF: ===================Camera #2 Frame #181===================
17-02-28 20:53:41.340 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:41.416 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:41.445 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:53:41.445 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:53:41.445 -08 000000027 INF: ===================Camera #0 Frame #186===================
17-02-28 20:53:41.467 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:53:41.467 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:53:41.467 -08 000000094 INF: ===================Camera #2 Frame #187===================
17-02-28 20:53:41.477 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:41.477 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:41.477 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:41.478 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:53:41.478 -08 000000120 INF: Y Motor: Unshifted Position: 2647709
17-02-28 20:53:41.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left===================
17-02-28 20:53:41.528 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:41.615 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:53:41.615 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:53:41.615 -08 000000027 INF: ===================Camera #0 Frame #193===================
17-02-28 20:53:41.637 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:53:41.637 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:53:41.637 -08 000000094 INF: ===================Camera #2 Frame #193===================
17-02-28 20:53:41.652 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:41.788 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:53:41.788 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:53:41.788 -08 000000027 INF: ===================Camera #0 Frame #199===================
17-02-28 20:53:41.791 -08 000000120 INF: Y Motor: Unshifted Position: 2444270
17-02-28 20:53:41.808 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:53:41.808 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:53:41.808 -08 000000094 INF: ===================Camera #2 Frame #200===================
17-02-28 20:53:41.841 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:41.957 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:53:41.957 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:53:41.957 -08 000000027 INF: ===================Camera #0 Frame #205===================
17-02-28 20:53:41.966 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:41.982 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:53:41.982 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:53:41.982 -08 000000094 INF: ===================Camera #2 Frame #206===================
17-02-28 20:53:42.101 -08 000000120 INF: Y Motor: Unshifted Position: 2242555
17-02-28 20:53:42.127 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:53:42.127 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:53:42.127 -08 000000027 INF: ===================Camera #0 Frame #212===================
17-02-28 20:53:42.151 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:42.153 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:53:42.153 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:53:42.153 -08 000000094 INF: ===================Camera #2 Frame #212===================
17-02-28 20:53:42.276 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:42.300 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:53:42.300 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:53:42.300 -08 000000027 INF: ===================Camera #0 Frame #218===================
17-02-28 20:53:42.327 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:53:42.327 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:53:42.328 -08 000000094 INF: ===================Camera #2 Frame #219===================
17-02-28 20:53:42.415 -08 000000120 INF: Y Motor: Unshifted Position: 2038456
17-02-28 20:53:42.465 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:42.470 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:53:42.470 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:53:42.470 -08 000000027 INF: ===================Camera #0 Frame #224===================
17-02-28 20:53:42.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:42.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left===================
17-02-28 20:53:42.502 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:53:42.502 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:53:42.502 -08 000000094 INF: ===================Camera #2 Frame #225===================
17-02-28 20:53:42.590 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:42.640 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:53:42.640 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:53:42.640 -08 000000027 INF: ===================Camera #0 Frame #230===================
17-02-28 20:53:42.673 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:53:42.673 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:53:42.673 -08 000000094 INF: ===================Camera #2 Frame #232===================
17-02-28 20:53:42.728 -08 000000120 INF: Y Motor: Unshifted Position: 1835432
17-02-28 20:53:42.778 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:42.809 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:53:42.809 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:53:42.809 -08 000000027 INF: ===================Camera #0 Frame #237===================
17-02-28 20:53:42.847 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:53:42.847 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:53:42.847 -08 000000094 INF: ===================Camera #2 Frame #238===================
17-02-28 20:53:42.901 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:42.982 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:53:42.982 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:53:42.982 -08 000000027 INF: ===================Camera #0 Frame #243===================
17-02-28 20:53:43.016 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:53:43.016 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:53:43.016 -08 000000094 INF: ===================Camera #2 Frame #244===================
17-02-28 20:53:43.038 -08 000000120 INF: Y Motor: Unshifted Position: 1633928
17-02-28 20:53:43.088 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:43.152 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:53:43.152 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:53:43.152 -08 000000027 INF: ===================Camera #0 Frame #249===================
17-02-28 20:53:43.187 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:53:43.187 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:53:43.187 -08 000000094 INF: ===================Camera #2 Frame #251===================
17-02-28 20:53:43.212 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:43.322 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:53:43.322 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:53:43.322 -08 000000027 INF: ===================Camera #0 Frame #256===================
17-02-28 20:53:43.351 -08 000000120 INF: Y Motor: Unshifted Position: 1429609
17-02-28 20:53:43.361 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:53:43.361 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:53:43.361 -08 000000094 INF: ===================Camera #2 Frame #257===================
17-02-28 20:53:43.401 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:43.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:43.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left===================
17-02-28 20:53:43.493 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:53:43.493 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:53:43.493 -08 000000027 INF: ===================Camera #0 Frame #262===================
17-02-28 20:53:43.525 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:43.532 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:53:43.532 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:53:43.532 -08 000000094 INF: ===================Camera #2 Frame #263===================
17-02-28 20:53:43.661 -08 000000120 INF: Y Motor: Unshifted Position: 1228099
17-02-28 20:53:43.663 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:53:43.663 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:53:43.663 -08 000000027 INF: ===================Camera #0 Frame #268===================
17-02-28 20:53:43.702 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:53:43.702 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:53:43.702 -08 000000094 INF: ===================Camera #2 Frame #270===================
17-02-28 20:53:43.711 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:43.784 -08 000000038 INF: FPGA: Recv TDIYWAIT
17-02-28 20:53:43.784 -08 000000070 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:43.786 -08 000000070 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:53:43.787 -08 000000119 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:53:43.787 -08 000000124 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:53:43.787 -08 000000119 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:53:43.787 -08 000000119 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:53:43.787 -08 000000124 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:53:43.787 -08 000000124 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:53:43.787 -08 000000124 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:53:43.787 -08 000000124 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:53:43.787 -08 000000119 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:53:43.790 -08 000000119 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:53:43.833 -08 000000027 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:43.833 -08 000000027 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:43.833 -08 000000027 INF: ===================Camera #0 Frame #272===================
17-02-28 20:53:43.836 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:43.846 -08 000000027 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:43.847 -08 000000027 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:43.975 -08 000000120 INF: Y Motor: Unshifted Position: 1023789
17-02-28 20:53:43.980 -08 000000027 INF: Camera #0 ReleaseBuffer
17-02-28 20:53:43.980 -08 000000094 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:43.980 -08 000000094 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:43.980 -08 000000094 INF: ===================Camera #2 Frame #272===================
17-02-28 20:53:43.980 -08 000000027 INF: ===================Camera TDI===================
17-02-28 20:53:43.987 -08 000000094 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:43.987 -08 000000094 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:44.011 -08 000000027 INF: ======================================
17-02-28 20:53:44.025 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:44.158 -08 000000094 INF: Camera #2 ReleaseBuffer
17-02-28 20:53:44.158 -08 000000094 INF: ===================Camera TDI===================
17-02-28 20:53:44.159 -08 000000071 INF: FPGA: Recv EX2MV
17-02-28 20:53:44.159 -08 000000071 INF: FPGA: Recv EX1MV
17-02-28 20:53:44.159 -08 000000119 INF: Excitation Filter 1: Moved 107 steps in 372.14 ms
17-02-28 20:53:44.159 -08 000000119 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.2465 ms
17-02-28 20:53:44.159 -08 000000119 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.4556 ms
17-02-28 20:53:44.159 -08 000000124 INF: Excitation Filter 2: Moved 107 steps in 372.0153 ms
17-02-28 20:53:44.159 -08 000000124 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.2419 ms
17-02-28 20:53:44.159 -08 000000124 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.4484 ms
17-02-28 20:53:44.159 -08 000000119 INF: ======================================
17-02-28 20:53:44.160 -08 000000124 INF: ======================================
17-02-28 20:53:44.161 -08 000000120 INF: Y Motor: Unshifted Position: 991270
17-02-28 20:53:44.161 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:44.161 -08 000000120 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:44.161 -08 000000070 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:44.162 -08 000000070 INF: ======================================
17-02-28 20:53:44.191 -08 000000094 INF: ======================================
17-02-28 20:53:44.192 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:53:44.194 -08 000000095 INF: ======================================
17-02-28 20:53:44.223 -08 000000120 INF: Y Motor: Recv v 0\r
17-02-28 20:53:44.223 -08 000000120 INF: Y Motor: Moved to 14.9127 after 7861 ms
17-02-28 20:53:44.223 -08 000000120 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:44.287 -08 000000120 INF: Y Motor: Recv v 4097\r
17-02-28 20:53:44.287 -08 000000120 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:44.287 -08 000000120 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:44.347 -08 000000120 INF: Y Motor: Recv v 0\r
17-02-28 20:53:44.347 -08 000000120 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:44.347 -08 000000120 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:44.412 -08 000000120 INF: Y Motor: Recv v 134217728\r
17-02-28 20:53:44.412 -08 000000120 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:53:44.412 -08 000000120 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:44.412 -08 000000120 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:44.474 -08 000000120 INF: Y Motor: Recv v 0\r
17-02-28 20:53:44.474 -08 000000120 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:44.474 -08 000000120 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:44.474 -08 000000120 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:44.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:44.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left===================
17-02-28 20:53:44.536 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:53:44.536 -08 000000120 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:44.536 -08 000000120 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:44.597 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:53:44.597 -08 000000120 INF: ======================================
17-02-28 20:53:44.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:44.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:44.600 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:44.600 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:53:44.657 -08 000000111 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:53:44.657 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:44.723 -08 000000061 INF: FPGA: Recv TDIYERD 1491270
17-02-28 20:53:44.723 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:53:44.784 -08 000000064 INF: FPGA: Recv ZADCR 35128
17-02-28 20:53:44.784 -08 000000042 INF: At scan end Y pos = 14.913 and Z pos = -0.134. Y moved -48.539 mm
17-02-28 20:53:44.784 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:53:44.847 -08 000000119 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:53:44.847 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:53:44.847 -08 000000042 INF: TDIScan finished after 12813.8725 ms
17-02-28 20:53:44.847 -08 000000042 INF: Image[0]: Y should trigger at 63.452 mm, 2nd row was at 64.361 mm (error = 0.909 mm)
17-02-28 20:53:44.847 -08 000000042 INF: Image[2]: Y should trigger at 63.452 mm, 2nd row was at 64.361 mm (error = 0.909 mm)
17-02-28 20:53:44.849 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:44.884 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.586 um
17-02-28 20:53:44.884 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:44.885 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:53:44.908 -08 000000027 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:53:44.908 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:44.909 -08 000000031 INF: ===================Dither Clean Up Command===================
17-02-28 20:53:44.909 -08 000000038 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:53:44.909 -08 000000129 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:53:44.909 -08 000000097 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:53:44.909 -08 000000097 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:53:44.909 -08 000000097 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:53:44.910 -08 000000129 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:53:44.910 -08 000000129 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:53:44.910 -08 000000038 INF: ======================================
17-02-28 20:53:44.910 -08 000000029 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:44.910 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:44.911 -08 000000029 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:53:44.913 -08 000000036 INF: ===================LFT:Extracting coords===================
17-02-28 20:53:44.938 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:44.939 -08 000000036 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:53:44.940 -08 000000093 INF: ===================LookupFocusTracking===================
17-02-28 20:53:44.940 -08 000000096 INF: ===================LookupFocusTracking===================
17-02-28 20:53:44.940 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:53:44.940 -08 000000119 INF: ===================LookupFocusTracking===================
17-02-28 20:53:44.940 -08 000000093 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:44.940 -08 000000119 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:44.940 -08 000000096 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:44.940 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:44.970 -08 000000063 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:44.970 -08 000000063 INF: FPGA: Recv ZSEL 
17-02-28 20:53:44.970 -08 000000029 INF: FPGA: Xmit ZDACW 40454\n
17-02-28 20:53:44.970 -08 000000097 INF: ======================================
17-02-28 20:53:44.972 -08 000000129 INF: Y Motor: Recv ok\r
17-02-28 20:53:44.972 -08 000000129 INF: ======================================
17-02-28 20:53:45.014 -08 000000093 INF: FC:B, C:5,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:45.014 -08 000000119 INF: FC:B, C:5,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:45.015 -08 000000089 INF: FC:B, C:5,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:45.021 -08 000000096 INF: FC:B, C:5,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:45.033 -08 000000118 INF: FPGA: Recv ZDACW 
17-02-28 20:53:45.033 -08 000000029 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:53:45.034 -08 000000029 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:53:45.094 -08 000000055 INF: FPGA: Recv TDIBB
17-02-28 20:53:45.094 -08 000000029 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:45.095 -08 000000029 INF: ======================================
17-02-28 20:53:45.166 -08 000000119 INF: LFT found best fwhm score 2.079185 in 152 ms
17-02-28 20:53:45.166 -08 000000119 INF: LFT found good score at index 7237 with fwhm value 2.079185. Next cycle, cycle 6 starting Z position for top surface is at -0.156 mm FC:B, C:5,L:3,T
17-02-28 20:53:45.166 -08 000000093 INF: LFT found best fwhm score 2.000038 in 152 ms
17-02-28 20:53:45.166 -08 000000093 INF: LFT found good score at index 6629 with fwhm value 2.000038. Next cycle, cycle 6 starting Z position for top surface is at -0.156 mm FC:B, C:5,L:3,T
17-02-28 20:53:45.166 -08 000000089 INF: LFT found best fwhm score 2.000026 in 151 ms
17-02-28 20:53:45.166 -08 000000119 INF: ===================LookupFocusTracking===================
17-02-28 20:53:45.166 -08 000000089 INF: LFT found good score at index 4017 with fwhm value 2.000026. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:3,T
17-02-28 20:53:45.166 -08 000000093 INF: ===================LookupFocusTracking===================
17-02-28 20:53:45.166 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:53:45.166 -08 000000119 INF: ======================================
17-02-28 20:53:45.166 -08 000000093 INF: ======================================
17-02-28 20:53:45.167 -08 000000089 INF: ======================================
17-02-28 20:53:45.185 -08 000000096 INF: LFT found best fwhm score 2.000199 in 163 ms
17-02-28 20:53:45.185 -08 000000096 INF: LFT found good score at index 1201 with fwhm value 2.000199. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:3,T
17-02-28 20:53:45.185 -08 000000096 INF: ===================LookupFocusTracking===================
17-02-28 20:53:45.185 -08 000000096 INF: ======================================
17-02-28 20:53:45.187 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:45.188 -08 000000036 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:5,L:3,T
17-02-28 20:53:45.188 -08 000000036 INF: ======================================
17-02-28 20:53:45.189 -08 000000031 INF: ======================================
17-02-28 20:53:45.190 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:45.191 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:53:45.191 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:45.191 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:53:45.191 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:45.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:53:45.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:45.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:53:45.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:45.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:53:45.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:53:45.193 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:53:45.193 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left===================
17-02-28 20:53:45.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:53:45.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:53:45.216 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:53:45.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:45.217 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:45.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:45.217 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:53:45.218 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 3===================
17-02-28 20:53:45.218 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface===================
17-02-28 20:53:45.257 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.258 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.258 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:53:45.258 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:53:45.309 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1207 Request: {"Cycle":5,"Lane":3,"Tile":1207,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF257","HCSMMF192","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.346 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:53:45.347 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.347 -08 000000042 INF: TopSurfaceZPositions[] was -0.157372030412564, so used the TopSurfaceZPositions[] (-0.157372030412564) + compensator value (0.0227).
17-02-28 20:53:45.353 -08 000000042 INF: LFT enabled: Best z-height for LaneTopSurface and Illumina.Instrument.Logic.Sentrix.II.SentrixSection was found to be -0.134672030412564
17-02-28 20:53:45.353 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:53:45.354 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.420 -08 000000093 INF: ===================Move Tilt Motor 2===================
17-02-28 20:53:45.420 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1211 Request: {"Cycle":5,"Lane":3,"Tile":1211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF273","HCSMMF221","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.420 -08 000000080 INF: ===================Move Tilt Motor 1===================
17-02-28 20:53:45.421 -08 000000093 INF: ======================================
17-02-28 20:53:45.421 -08 000000080 INF: ======================================
17-02-28 20:53:45.422 -08 000000080 INF: ===================Move Tilt Motor 3===================
17-02-28 20:53:45.423 -08 000000080 INF: ======================================
17-02-28 20:53:45.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:45.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left===================
17-02-28 20:53:45.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.482 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.483 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.484 -08 000000042 INF: Compensator: Remaining IntoPath
17-02-28 20:53:45.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.486 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:45.498 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92664, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:53:45.498 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03464, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:53:45.500 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1206 Request: {"Cycle":5,"Lane":3,"Tile":1206,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF260","HCSMMF231","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.508 -08 000000042 INF: Swath 0: Converted transform from (-39.35904, 20.96275) pixels to (-0.013455, 0.007245) mm.
17-02-28 20:53:45.519 -08 000000042 INF: Swath 1: Converted transform from (-60.6734, 20.48593) pixels to (-0.021045, 0.0069) mm.
17-02-28 20:53:45.520 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:53:45.521 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:53:45.521 -08 000000042 INF: Transformed XStagePosition from 76.92664 mm to 76.9131807424128 mm.
17-02-28 20:53:45.542 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5603343554549 mm.
17-02-28 20:53:45.542 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3603343554549 mm.
17-02-28 20:53:45.542 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4510843554549 mm.
17-02-28 20:53:45.546 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:45.547 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:53:45.547 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:45.547 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -154.3 um, section = D_1
17-02-28 20:53:45.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:45.550 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:45.551 -08 000000122 INF: ===================MoveEmissionFilters===================
17-02-28 20:53:45.551 -08 000000071 INF: ===================Move X,Y===================
17-02-28 20:53:45.551 -08 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:45.552 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:45.552 -08 000000071 INF: ===================Move X,Y, Parallel===================
17-02-28 20:53:45.552 -08 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:53:45.552 -08 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:45.552 -08 000000009 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:53:45.552 -08 000000126 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:45.552 -08 000000092 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:45.553 -08 000000009 INF: Z Motor: Moving to -0.1547 mm, started at -0.1543 mm
17-02-28 20:53:45.553 -08 000000009 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:53:45.553 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:45.553 -08 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:45.553 -08 000000126 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:45.553 -08 000000092 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:45.554 -08 000000062 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:53:45.554 -08 000000059 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:53:45.554 -08 000000035 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:53:45.554 -08 000000080 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:53:45.554 -08 000000095 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:53:45.554 -08 000000035 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:53:45.554 -08 000000062 INF: ======================================
17-02-28 20:53:45.554 -08 000000029 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:53:45.554 -08 000000084 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:53:45.554 -08 000000109 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:53:45.554 -08 000000080 INF: ======================================
17-02-28 20:53:45.555 -08 000000109 INF: ======================================
17-02-28 20:53:45.555 -08 000000084 INF: ======================================
17-02-28 20:53:45.555 -08 000000095 INF: ======================================
17-02-28 20:53:45.556 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:45.556 -08 000000129 INF: ===================Move X Motor without settling===================
17-02-28 20:53:45.556 -08 000000089 INF: Y Motor: Moving to 64.5603 mm @25.000 mm/sec, started at 14.9127 mm
17-02-28 20:53:45.556 -08 000000129 INF: X Motor: Xmit PR VM\n
17-02-28 20:53:45.556 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:45.556 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:45.556 -08 000000092 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:45.557 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1204 Request: {"Cycle":5,"Lane":3,"Tile":1204,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF191","HCSMMF197","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.557 -08 000000059 INF: ======================================
17-02-28 20:53:45.557 -08 000000035 INF: ======================================
17-02-28 20:53:45.557 -08 000000029 INF: ======================================
17-02-28 20:53:45.558 -08 000000092 INF: ======================================
17-02-28 20:53:45.558 -08 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:45.559 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:45.559 -08 000000126 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:45.560 -08 000000056 INF: ======================================
17-02-28 20:53:45.560 -08 000000037 INF: ======================================
17-02-28 20:53:45.560 -08 000000126 INF: ======================================
17-02-28 20:53:45.560 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1205 Request: {"Cycle":5,"Lane":3,"Tile":1205,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF233","HCSMMF220","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.561 -08 000000122 INF: ======================================
17-02-28 20:53:45.561 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1202 Request: {"Cycle":5,"Lane":3,"Tile":1202,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF277","HCSMMF208","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.564 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1209 Request: {"Cycle":5,"Lane":3,"Tile":1209,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF253","HCSMMF280","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.566 -08 000000120 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1210 Request: {"Cycle":5,"Lane":3,"Tile":1210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF269","HCSMMF198","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.567 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1201 Request: {"Cycle":5,"Lane":3,"Tile":1201,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF176","HCSMMF212","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.568 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1208 Request: {"Cycle":5,"Lane":3,"Tile":1208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF243","HCSMMF281","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.569 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1212 Request: {"Cycle":5,"Lane":3,"Tile":1212,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF196","HCSMMF209","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.571 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1213 Request: {"Cycle":5,"Lane":3,"Tile":1213,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF282","HCSMMF287","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.571 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1203 Request: {"Cycle":5,"Lane":3,"Tile":1203,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF275","HCSMMF263","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.573 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1219 Request: {"Cycle":5,"Lane":3,"Tile":1219,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF213","HCSMMF276","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.575 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1214 Request: {"Cycle":5,"Lane":3,"Tile":1214,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF236","HCSMMF183","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.577 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1217 Request: {"Cycle":5,"Lane":3,"Tile":1217,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF210","HCSMMF204","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.579 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1215 Request: {"Cycle":5,"Lane":3,"Tile":1215,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF185","HCSMMF226","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.583 -08 000000124 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1220 Request: {"Cycle":5,"Lane":3,"Tile":1220,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF279","HCSMMF250","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.585 -08 000000119 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1216 Request: {"Cycle":5,"Lane":3,"Tile":1216,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF268","HCSMMF207","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.590 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1218 Request: {"Cycle":5,"Lane":3,"Tile":1218,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF266","HCSMMF270","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.594 -08 000000123 INF: FPGA: Recv ZTRG 
17-02-28 20:53:45.594 -08 000000009 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:53:45.596 -08 000000129 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:53:45.596 -08 000000129 INF: X Motor: Xmit PR VI\n
17-02-28 20:53:45.596 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:53:45.596 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:45.596 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:45.607 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1221 Request: {"Cycle":5,"Lane":3,"Tile":1221,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF205","HCSMMF283","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.615 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1222 Request: {"Cycle":5,"Lane":3,"Tile":1222,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF235","HCSMMF240","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.619 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1224 Request: {"Cycle":5,"Lane":3,"Tile":1224,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF254","HCSMMF238","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.622 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1223 Request: {"Cycle":5,"Lane":3,"Tile":1223,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF255","HCSMMF244","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.629 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1227 Request: {"Cycle":5,"Lane":3,"Tile":1227,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF189","HCSMMF223","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.635 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1228 Request: {"Cycle":5,"Lane":3,"Tile":1228,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF264","HCSMMF177","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.638 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1226 Request: {"Cycle":5,"Lane":3,"Tile":1226,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF217","HCSMMF184","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.640 -08 000000107 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 5 Tile: 1225 Request: {"Cycle":5,"Lane":3,"Tile":1225,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF286","HCSMMF222","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:45.645 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:45.652 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:53:45.658 -08 000000052 INF: FPGA: Recv ZYT 
17-02-28 20:53:45.659 -08 000000009 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:53:45.659 -08 000000009 INF: FPGA: Xmit ZMV 40546\n
17-02-28 20:53:45.659 -08 000000129 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:53:45.659 -08 000000129 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:53:45.659 -08 000000129 INF: X Motor: Moving to 76.9132 mm @15.000 mm/sec, started at 75.2451 mm
17-02-28 20:53:45.659 -08 000000129 INF: X Motor: Xmit MA 7337\n
17-02-28 20:53:45.661 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:53:45.661 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:45.718 -08 000000027 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:53:45.718 -08 000000027 INF: FPGA: Recv ZMV 
17-02-28 20:53:45.718 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:53:45.718 -08 000000009 INF: Z Motor: MoveAndTrigger 'ZMV' command took 59.3348 ms
17-02-28 20:53:45.718 -08 000000009 INF: FPGA: Xmit ZDACR\n
17-02-28 20:53:45.720 -08 000000129 INF: X Motor: Recv MA 7337\r\n>
17-02-28 20:53:45.720 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:53:45.720 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:45.720 -08 000000129 INF: X Motor: WaitUntilStopped 60111
17-02-28 20:53:45.720 -08 000000089 INF: Y Motor: Set target position to 5956033 encoder counts
17-02-28 20:53:45.720 -08 000000089 INF: Y Motor: Xmit s r0xca 5956033\r
17-02-28 20:53:45.752 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:45.753 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:53:45.783 -08 000000122 INF: FPGA: Recv ZDACR 40546
17-02-28 20:53:45.783 -08 000000009 INF: Z Motor: MoveAndTrigger took 230.8198 ms w/comms
17-02-28 20:53:45.783 -08 000000009 INF: Z Motor: After move to -0.1547, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:53:45.783 -08 000000009 INF: Z Motor: MoveAbsStepped took 231.0125 ms
17-02-28 20:53:45.784 -08 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:45.785 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:53:45.785 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:53:45.785 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:45.785 -08 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:53:45.786 -08 000000067 INF: ===================TDI Scan Setup===================
17-02-28 20:53:45.786 -08 000000126 INF: ===================Camera Arm TDI===================
17-02-28 20:53:45.787 -08 000000067 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:45.787 -08 000000126 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:45.787 -08 000000067 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:45.788 -08 000000126 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:45.788 -08 000000067 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:45.788 -08 000000067 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:53:45.808 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:45.814 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:53:45.845 -08 000000040 INF: FPGA: Recv ZSEL 
17-02-28 20:53:45.846 -08 000000067 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:45.846 -08 000000067 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:53:45.847 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:53:45.847 -08 000000089 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:53:45.847 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:45.907 -08 000000109 INF: FPGA: Recv TDIBB
17-02-28 20:53:45.907 -08 000000067 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:45.909 -08 000000067 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:45.909 -08 000000067 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:45.911 -08 000000067 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:53:45.911 -08 000000067 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:53:45.911 -08 000000067 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:53:45.969 -08 000000056 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:45.969 -08 000000067 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:45.971 -08 000000067 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:53:45.971 -08 000000067 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:45.973 -08 000000089 INF: Y Motor: Unshifted Position: 1072367
17-02-28 20:53:45.973 -08 000000067 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:53:45.973 -08 000000067 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:53:45.973 -08 000000067 INF: Z Motor: Arming to move to -0.1147 mm
17-02-28 20:53:45.973 -08 000000067 INF: FPGA: Xmit ZYT 6436033 4\n
17-02-28 20:53:46.023 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:46.031 -08 000000062 INF: FPGA: Recv ZYT 
17-02-28 20:53:46.031 -08 000000067 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1572367 enc / 15.724 mm / ) = 6436033 enc / 64.360 mm
17-02-28 20:53:46.031 -08 000000067 INF: FPGA: Xmit ZARM 30060\n
17-02-28 20:53:46.070 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:46.075 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:53:46.093 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:53:46.093 -08 000000067 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8534 ms
17-02-28 20:53:46.093 -08 000000067 INF: Z Motor: ArmAbsStepped took 119.6987 ms
17-02-28 20:53:46.093 -08 000000067 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:46.095 -08 000000067 INF: ===================TDI Scan Setup===================
17-02-28 20:53:46.096 -08 000000067 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:53:46.097 -08 000000067 INF: ===================TDI Scan Setup===================
17-02-28 20:53:46.098 -08 000000067 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:53:46.098 -08 000000067 INF: ===================TDI Scan Setup===================
17-02-28 20:53:46.100 -08 000000067 INF: ======================================
17-02-28 20:53:46.148 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:46.165 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:46.171 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:53:46.265 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:46.286 -08 000000089 INF: Y Motor: Unshifted Position: 1772936
17-02-28 20:53:46.336 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:46.347 -08 000000129 INF: X Motor: Xmit PR ER\n
17-02-28 20:53:46.408 -08 000000129 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:53:46.408 -08 000000129 INF: X Motor: Moved to 76.9126 after 688 ms
17-02-28 20:53:46.408 -08 000000129 INF: ======================================
17-02-28 20:53:46.410 -08 000000126 INF: Camera #0 AttachBuffer (imageDataPtr = 56923197488 imgPtr = 56923197488 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:46.410 -08 000000126 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:46.410 -08 000000126 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:46.425 -08 000000126 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:46.427 -08 000000126 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:46.459 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:46.481 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:46.481 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:46.481 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:53:46.481 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:46.548 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:53:46.578 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:53:46.595 -08 000000089 INF: Y Motor: Unshifted Position: 2555455
17-02-28 20:53:46.645 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:46.663 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:53:46.663 -08 000000018 INF: Current Position of Pump is: 15360
17-02-28 20:53:46.763 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:53:46.772 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:46.843 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:53:46.843 -08 000000018 INF: Current Position of Pump is: 15360
17-02-28 20:53:46.843 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC===================
17-02-28 20:53:46.909 -08 000000089 INF: Y Motor: Unshifted Position: 3333737
17-02-28 20:53:46.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD15360R\r
17-02-28 20:53:46.959 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:47.032 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:47.077 -08 000000126 INF: Camera #2 AttachBuffer (imageDataPtr = 58735136816 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:47.077 -08 000000126 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:47.077 -08 000000126 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:47.083 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:47.093 -08 000000126 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:47.095 -08 000000126 INF: ===================Camera Arm TDI===================
17-02-28 20:53:47.096 -08 000000126 INF: ======================================
17-02-28 20:53:47.097 -08 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:47.098 -08 000000009 INF: ======================================
17-02-28 20:53:47.132 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:47.219 -08 000000089 INF: Y Motor: Unshifted Position: 4121303
17-02-28 20:53:47.220 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:47.269 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:47.396 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:47.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:47.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:47.532 -08 000000089 INF: Y Motor: Unshifted Position: 4899572
17-02-28 20:53:47.582 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:47.706 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:47.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:47.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:47.845 -08 000000089 INF: Y Motor: Unshifted Position: 5673653
17-02-28 20:53:47.895 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:48.019 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:48.094 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:48.155 -08 000000089 INF: Y Motor: Unshifted Position: 5956035
17-02-28 20:53:48.155 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:48.155 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:48.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:48.217 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:53:48.217 -08 000000089 INF: Y Motor: Moved to 64.5604 after 2369 ms
17-02-28 20:53:48.217 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:48.279 -08 000000089 INF: Y Motor: Recv v 4096\r
17-02-28 20:53:48.279 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:48.279 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:48.345 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:53:48.345 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:48.345 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:48.406 -08 000000089 INF: Y Motor: Recv v 402653184\r
17-02-28 20:53:48.406 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:48.406 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:53:48.406 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:48.406 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:48.467 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:48.468 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:53:48.468 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:48.468 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:48.468 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:48.530 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:53:48.530 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:48.530 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:48.591 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:53:48.591 -08 000000089 INF: ======================================
17-02-28 20:53:48.592 -08 000000071 INF: ===================Move X,Y===================
17-02-28 20:53:48.594 -08 000000071 INF: ======================================
17-02-28 20:53:48.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:48.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:48.596 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:53:48.596 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:53:48.654 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:53:48.654 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:53:48.714 -08 000000059 INF: FPGA: Recv ZFREQCL
17-02-28 20:53:48.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:53:48.715 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:48.715 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:48.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:48.779 -08 000000031 INF: FPGA: Recv TDIYERD 6456034
17-02-28 20:53:48.779 -08 000000042 INF: Before scan, Y encoder from FPGA = 6456034 counts (64.560 mm)
17-02-28 20:53:48.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:48.780 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:48.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:48.781 -08 000000035 INF: ===================TDI FPGA Arm===================
17-02-28 20:53:48.781 -08 000000097 INF: ===================Set YMotor gains for scans===================
17-02-28 20:53:48.781 -08 000000097 INF: ======================================
17-02-28 20:53:48.781 -08 000000035 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:48.782 -08 000000035 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:53:48.782 -08 000000035 INF: FPGA: Xmit TDIYPOS 6345108\n
17-02-28 20:53:48.841 -08 000000071 INF: FPGA: Recv TDIYPOS
17-02-28 20:53:48.841 -08 000000035 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:48.843 -08 000000035 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:53:48.843 -08 000000035 INF: FPGA: Xmit TDIYARM3 139264 6436033 1 1\n
17-02-28 20:53:48.905 -08 000000060 INF: FPGA: Recv TDIYARM3
17-02-28 20:53:48.906 -08 000000035 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:53:48.907 -08 000000035 INF: ===================TDI FPGA Arm===================
17-02-28 20:53:48.908 -08 000000035 INF: ======================================
17-02-28 20:53:48.909 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:53:48.910 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:48.910 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:48.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:48.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:48.912 -08 000000129 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:53:48.912 -08 000000038 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:53:48.912 -08 000000129 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:53:48.912 -08 000000129 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:53:48.912 -08 000000129 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:53:48.912 -08 000000038 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:53:48.912 -08 000000129 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:53:48.912 -08 000000038 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:53:48.912 -08 000000038 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:53:48.915 -08 000000038 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:53:49.030 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:49.091 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:49.280 -08 000000095 INF: FPGA: Recv EX2MV
17-02-28 20:53:49.281 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:53:49.281 -08 000000129 INF: Excitation Filter 2: Moved -107 steps in 368.3779 ms
17-02-28 20:53:49.281 -08 000000038 INF: Excitation Filter 1: Moved -107 steps in 368.2384 ms
17-02-28 20:53:49.281 -08 000000129 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.5003 ms
17-02-28 20:53:49.281 -08 000000129 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.7832 ms
17-02-28 20:53:49.281 -08 000000038 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.4817 ms
17-02-28 20:53:49.281 -08 000000038 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.6988 ms
17-02-28 20:53:49.281 -08 000000129 INF: ======================================
17-02-28 20:53:49.281 -08 000000038 INF: ======================================
17-02-28 20:53:49.282 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:49.284 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:49.284 -08 000000097 INF: ===================Camera TDI===================
17-02-28 20:53:49.284 -08 000000120 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:49.284 -08 000000118 INF: ===================FPGA Z Wait===================
17-02-28 20:53:49.285 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:49.285 -08 000000118 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:53:49.285 -08 000000077 INF: Y Motor: Moving to 14.9120 mm @6.500 mm/sec, started at 64.5604 mm
17-02-28 20:53:49.285 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:49.285 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:49.285 -08 000000097 INF: ===================Camera TDI, Parallel===================
17-02-28 20:53:49.285 -08 000000120 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:53:49.286 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:53:49.286 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:53:49.288 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:49.288 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:49.288 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:49.288 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:49.289 -08 000000120 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:53:49.341 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:49.343 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:53:49.343 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:49.343 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:49.404 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:49.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:53:49.404 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:53:49.412 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:53:49.412 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:49.439 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:49.439 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:49.440 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:49.440 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:49.467 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:53:49.467 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:49.467 -08 000000077 INF: Y Motor: Set target position to 991200 encoder counts
17-02-28 20:53:49.467 -08 000000077 INF: Y Motor: Xmit s r0xca 991200\r
17-02-28 20:53:49.531 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:53:49.531 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:53:49.531 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:49.590 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:49.590 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:53:49.590 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:49.590 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:53:49.591 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:53:49.591 -08 000000077 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:53:49.591 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:49.651 -08 000000063 INF: FPGA: Recv ZWAIT 
17-02-28 20:53:49.651 -08 000000118 INF: ======================================
17-02-28 20:53:49.715 -08 000000077 INF: Y Motor: Unshifted Position: 5895481
17-02-28 20:53:49.740 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:53:49.740 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:53:49.740 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:53:49.740 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:53:49.740 -08 000000109 INF: ===================Camera #0 Frame #5===================
17-02-28 20:53:49.740 -08 000000036 INF: ===================Camera #2 Frame #5===================
17-02-28 20:53:49.765 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:49.891 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:49.905 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:53:49.905 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:53:49.905 -08 000000109 INF: ===================Camera #0 Frame #11===================
17-02-28 20:53:49.906 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:53:49.906 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:53:49.906 -08 000000036 INF: ===================Camera #2 Frame #11===================
17-02-28 20:53:50.028 -08 000000077 INF: Y Motor: Unshifted Position: 5692682
17-02-28 20:53:50.074 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:53:50.074 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:53:50.074 -08 000000109 INF: ===================Camera #0 Frame #17===================
17-02-28 20:53:50.075 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:53:50.075 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:53:50.075 -08 000000036 INF: ===================Camera #2 Frame #17===================
17-02-28 20:53:50.079 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:50.201 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:50.242 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:53:50.242 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:53:50.242 -08 000000109 INF: ===================Camera #0 Frame #23===================
17-02-28 20:53:50.244 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:53:50.244 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:53:50.244 -08 000000036 INF: ===================Camera #2 Frame #23===================
17-02-28 20:53:50.341 -08 000000077 INF: Y Motor: Unshifted Position: 5490539
17-02-28 20:53:50.391 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:50.415 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:53:50.415 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:53:50.415 -08 000000036 INF: ===================Camera #2 Frame #30===================
17-02-28 20:53:50.419 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:53:50.419 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:53:50.419 -08 000000109 INF: ===================Camera #0 Frame #30===================
17-02-28 20:53:50.504 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:53:50.515 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:50.588 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:50.597 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:53:50.597 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:53:50.597 -08 000000036 INF: ===================Camera #2 Frame #36===================
17-02-28 20:53:50.600 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:53:50.600 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:53:50.600 -08 000000109 INF: ===================Camera #0 Frame #36===================
17-02-28 20:53:50.651 -08 000000077 INF: Y Motor: Unshifted Position: 5286868
17-02-28 20:53:50.688 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:50.701 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:50.766 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:53:50.766 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:53:50.766 -08 000000036 INF: ===================Camera #2 Frame #42===================
17-02-28 20:53:50.774 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:50.776 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:53:50.776 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:53:50.776 -08 000000109 INF: ===================Camera #0 Frame #43===================
17-02-28 20:53:50.825 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:50.938 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:53:50.938 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:53:50.938 -08 000000036 INF: ===================Camera #2 Frame #49===================
17-02-28 20:53:50.957 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:53:50.957 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:53:50.957 -08 000000109 INF: ===================Camera #0 Frame #49===================
17-02-28 20:53:50.964 -08 000000077 INF: Y Motor: Unshifted Position: 5083193
17-02-28 20:53:51.014 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:51.024 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:51.087 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:51.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:51.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:53:51.113 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:53:51.113 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:53:51.113 -08 000000036 INF: ===================Camera #2 Frame #55===================
17-02-28 20:53:51.133 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:53:51.133 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:53:51.133 -08 000000109 INF: ===================Camera #0 Frame #56===================
17-02-28 20:53:51.138 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:51.277 -08 000000077 INF: Y Motor: Unshifted Position: 4880398
17-02-28 20:53:51.283 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:53:51.283 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:53:51.283 -08 000000036 INF: ===================Camera #2 Frame #61===================
17-02-28 20:53:51.304 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:53:51.304 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:53:51.304 -08 000000109 INF: ===================Camera #0 Frame #62===================
17-02-28 20:53:51.327 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:51.451 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:51.453 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:53:51.453 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:53:51.453 -08 000000036 INF: ===================Camera #2 Frame #68===================
17-02-28 20:53:51.460 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:51.461 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:51.461 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:51.462 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:51.473 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:53:51.473 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:53:51.473 -08 000000109 INF: ===================Camera #0 Frame #68===================
17-02-28 20:53:51.524 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:51.524 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (8)===================
17-02-28 20:53:51.524 -08 000000018 INF: Valve A1: Go to position 8
17-02-28 20:53:51.524 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:53:51.586 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-02-28 20:53:51.586 -08 000000018 INF: Valve A1: 23.150 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:53:51.586 -08 000000018 INF: Valve A1: Taking longest path 'CC' from 4 to 8 to avoid 7
17-02-28 20:53:51.586 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC8\r
17-02-28 20:53:51.586 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:53:51.586 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:53:51.587 -08 000000077 INF: Y Motor: Unshifted Position: 4678032
17-02-28 20:53:51.625 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:53:51.625 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:53:51.625 -08 000000036 INF: ===================Camera #2 Frame #74===================
17-02-28 20:53:51.637 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:51.641 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:53:51.641 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:53:51.641 -08 000000109 INF: ===================Camera #0 Frame #75===================
17-02-28 20:53:51.762 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:51.794 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:53:51.794 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:53:51.794 -08 000000036 INF: ===================Camera #2 Frame #80===================
17-02-28 20:53:51.812 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:53:51.812 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:53:51.812 -08 000000109 INF: ===================Camera #0 Frame #81===================
17-02-28 20:53:51.901 -08 000000077 INF: Y Motor: Unshifted Position: 4475216
17-02-28 20:53:51.951 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:51.964 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:53:51.964 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:53:51.964 -08 000000036 INF: ===================Camera #2 Frame #87===================
17-02-28 20:53:51.980 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:53:51.980 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:53:51.980 -08 000000109 INF: ===================Camera #0 Frame #87===================
17-02-28 20:53:52.075 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:52.137 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:53:52.137 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:53:52.137 -08 000000036 INF: ===================Camera #2 Frame #93===================
17-02-28 20:53:52.149 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:53:52.149 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:53:52.149 -08 000000109 INF: ===================Camera #0 Frame #93===================
17-02-28 20:53:52.211 -08 000000077 INF: Y Motor: Unshifted Position: 4272420
17-02-28 20:53:52.261 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:52.307 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:53:52.307 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:53:52.307 -08 000000036 INF: ===================Camera #2 Frame #99===================
17-02-28 20:53:52.318 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:53:52.318 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:53:52.318 -08 000000109 INF: ===================Camera #0 Frame #100===================
17-02-28 20:53:52.335 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:53:52.335 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:52.335 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:53:52.388 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:52.476 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:53:52.476 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:53:52.476 -08 000000036 INF: ===================Camera #2 Frame #105===================
17-02-28 20:53:52.489 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:53:52.489 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:53:52.489 -08 000000109 INF: ===================Camera #0 Frame #106===================
17-02-28 20:53:52.524 -08 000000077 INF: Y Motor: Unshifted Position: 4068746
17-02-28 20:53:52.574 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:52.645 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:53:52.645 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:53:52.645 -08 000000036 INF: ===================Camera #2 Frame #112===================
17-02-28 20:53:52.657 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:53:52.657 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:53:52.657 -08 000000109 INF: ===================Camera #0 Frame #112===================
17-02-28 20:53:52.698 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:52.817 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:53:52.817 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:53:52.817 -08 000000036 INF: ===================Camera #2 Frame #118===================
17-02-28 20:53:52.825 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:53:52.825 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:53:52.825 -08 000000109 INF: ===================Camera #0 Frame #118===================
17-02-28 20:53:52.836 -08 000000077 INF: Y Motor: Unshifted Position: 3865733
17-02-28 20:53:52.886 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:52.986 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:53:52.986 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:53:52.986 -08 000000036 INF: ===================Camera #2 Frame #124===================
17-02-28 20:53:52.993 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:53:52.994 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:53:52.994 -08 000000109 INF: ===================Camera #0 Frame #124===================
17-02-28 20:53:53.010 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:53.146 -08 000000077 INF: Y Motor: Unshifted Position: 3663580
17-02-28 20:53:53.155 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:53:53.155 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:53:53.155 -08 000000036 INF: ===================Camera #2 Frame #130===================
17-02-28 20:53:53.162 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:53:53.162 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:53:53.162 -08 000000109 INF: ===================Camera #0 Frame #131===================
17-02-28 20:53:53.196 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:53.204 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:53:53.204 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:53:53.204 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:53.273 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:53.281 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:53:53.323 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:53.324 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:53:53.324 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:53:53.324 -08 000000036 INF: ===================Camera #2 Frame #137===================
17-02-28 20:53:53.333 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:53:53.333 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:53:53.333 -08 000000109 INF: ===================Camera #0 Frame #137===================
17-02-28 20:53:53.373 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:53:53.458 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:53:53.458 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:53:53.459 -08 000000077 INF: Y Motor: Unshifted Position: 3459484
17-02-28 20:53:53.496 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:53:53.496 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:53:53.496 -08 000000036 INF: ===================Camera #2 Frame #143===================
17-02-28 20:53:53.501 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:53:53.501 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:53:53.501 -08 000000109 INF: ===================Camera #0 Frame #143===================
17-02-28 20:53:53.509 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:53.558 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:53:53.633 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:53.647 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:53.665 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:53:53.665 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:53:53.665 -08 000000036 INF: ===================Camera #2 Frame #149===================
17-02-28 20:53:53.669 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:53:53.669 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:53:53.669 -08 000000109 INF: ===================Camera #0 Frame #149===================
17-02-28 20:53:53.747 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:53.770 -08 000000077 INF: Y Motor: Unshifted Position: 3257772
17-02-28 20:53:53.820 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:53.834 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:53.834 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:53:53.834 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:53:53.834 -08 000000036 INF: ===================Camera #2 Frame #155===================
17-02-28 20:53:53.837 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:53:53.837 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:53:53.837 -08 000000109 INF: ===================Camera #0 Frame #156===================
17-02-28 20:53:53.949 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:54.003 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:53:54.003 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:53:54.003 -08 000000036 INF: ===================Camera #2 Frame #162===================
17-02-28 20:53:54.008 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:53:54.008 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:53:54.008 -08 000000109 INF: ===================Camera #0 Frame #162===================
17-02-28 20:53:54.083 -08 000000077 INF: Y Motor: Unshifted Position: 3054975
17-02-28 20:53:54.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:54.133 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:54.145 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:54.175 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:53:54.175 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:53:54.175 -08 000000036 INF: ===================Camera #2 Frame #168===================
17-02-28 20:53:54.176 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:53:54.176 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:53:54.176 -08 000000109 INF: ===================Camera #0 Frame #168===================
17-02-28 20:53:54.245 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:53:54.257 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:54.333 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:54.344 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:53:54.344 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:53:54.344 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:53:54.344 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:53:54.344 -08 000000109 INF: ===================Camera #0 Frame #174===================
17-02-28 20:53:54.344 -08 000000036 INF: ===================Camera #2 Frame #174===================
17-02-28 20:53:54.396 -08 000000077 INF: Y Motor: Unshifted Position: 2851311
17-02-28 20:53:54.433 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:54.446 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:54.514 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:53:54.514 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:53:54.514 -08 000000109 INF: ===================Camera #0 Frame #180===================
17-02-28 20:53:54.515 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:53:54.515 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:53:54.515 -08 000000036 INF: ===================Camera #2 Frame #180===================
17-02-28 20:53:54.519 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:53:54.519 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:53:54.570 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:54.619 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP7680R\r
17-02-28 20:53:54.683 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:53:54.683 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:53:54.683 -08 000000109 INF: ===================Camera #0 Frame #187===================
17-02-28 20:53:54.685 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:53:54.685 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:53:54.685 -08 000000036 INF: ===================Camera #2 Frame #187===================
17-02-28 20:53:54.705 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:54.706 -08 000000077 INF: Y Motor: Unshifted Position: 2649595
17-02-28 20:53:54.756 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:54.805 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:54.856 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:53:54.856 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:53:54.856 -08 000000109 INF: ===================Camera #0 Frame #193===================
17-02-28 20:53:54.859 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:53:54.859 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:53:54.859 -08 000000036 INF: ===================Camera #2 Frame #193===================
17-02-28 20:53:54.882 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:54.895 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:55.020 -08 000000077 INF: Y Motor: Unshifted Position: 2445496
17-02-28 20:53:55.026 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:53:55.026 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:53:55.026 -08 000000109 INF: ===================Camera #0 Frame #199===================
17-02-28 20:53:55.030 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:53:55.030 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:53:55.030 -08 000000036 INF: ===================Camera #2 Frame #199===================
17-02-28 20:53:55.070 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:55.145 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:55.194 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:55.196 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:53:55.196 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:53:55.196 -08 000000109 INF: ===================Camera #0 Frame #206===================
17-02-28 20:53:55.201 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:53:55.201 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:53:55.201 -08 000000036 INF: ===================Camera #2 Frame #206===================
17-02-28 20:53:55.205 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:55.332 -08 000000077 INF: Y Motor: Unshifted Position: 2242485
17-02-28 20:53:55.367 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:53:55.367 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:53:55.367 -08 000000109 INF: ===================Camera #0 Frame #212===================
17-02-28 20:53:55.373 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:53:55.373 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:53:55.373 -08 000000036 INF: ===================Camera #2 Frame #212===================
17-02-28 20:53:55.382 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:55.455 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:55.506 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:55.519 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:55.537 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:53:55.537 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:53:55.537 -08 000000109 INF: ===================Camera #0 Frame #218===================
17-02-28 20:53:55.543 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:53:55.543 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:53:55.543 -08 000000036 INF: ===================Camera #2 Frame #218===================
17-02-28 20:53:55.644 -08 000000077 INF: Y Motor: Unshifted Position: 2039682
17-02-28 20:53:55.694 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:55.706 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:53:55.706 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:53:55.706 -08 000000109 INF: ===================Camera #0 Frame #224===================
17-02-28 20:53:55.714 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:53:55.714 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:53:55.714 -08 000000036 INF: ===================Camera #2 Frame #225===================
17-02-28 20:53:55.769 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:55.817 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:55.831 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:55.875 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:53:55.875 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:53:55.875 -08 000000109 INF: ===================Camera #0 Frame #231===================
17-02-28 20:53:55.888 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:53:55.888 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:53:55.888 -08 000000036 INF: ===================Camera #2 Frame #231===================
17-02-28 20:53:55.957 -08 000000077 INF: Y Motor: Unshifted Position: 1836657
17-02-28 20:53:56.007 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:56.047 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:53:56.047 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:53:56.047 -08 000000109 INF: ===================Camera #0 Frame #237===================
17-02-28 20:53:56.058 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:53:56.058 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:53:56.058 -08 000000036 INF: ===================Camera #2 Frame #237===================
17-02-28 20:53:56.081 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:56.134 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:56.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:56.216 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:53:56.216 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:53:56.216 -08 000000109 INF: ===================Camera #0 Frame #243===================
17-02-28 20:53:56.228 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:53:56.228 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:53:56.228 -08 000000036 INF: ===================Camera #2 Frame #244===================
17-02-28 20:53:56.268 -08 000000077 INF: Y Motor: Unshifted Position: 1633860
17-02-28 20:53:56.318 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:56.384 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:53:56.384 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:53:56.384 -08 000000109 INF: ===================Camera #0 Frame #249===================
17-02-28 20:53:56.390 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:56.400 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:53:56.400 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:53:56.400 -08 000000036 INF: ===================Camera #2 Frame #250===================
17-02-28 20:53:56.441 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:56.452 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:56.555 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:53:56.555 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:53:56.555 -08 000000109 INF: ===================Camera #0 Frame #256===================
17-02-28 20:53:56.571 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:53:56.571 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:53:56.571 -08 000000036 INF: ===================Camera #2 Frame #256===================
17-02-28 20:53:56.579 -08 000000077 INF: Y Motor: Unshifted Position: 1430845
17-02-28 20:53:56.629 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:56.703 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:56.728 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:53:56.728 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:53:56.728 -08 000000109 INF: ===================Camera #0 Frame #262===================
17-02-28 20:53:56.741 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:53:56.741 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:53:56.741 -08 000000036 INF: ===================Camera #2 Frame #262===================
17-02-28 20:53:56.755 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:56.765 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:56.893 -08 000000077 INF: Y Motor: Unshifted Position: 1228029
17-02-28 20:53:56.897 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:53:56.897 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:53:56.897 -08 000000109 INF: ===================Camera #0 Frame #268===================
17-02-28 20:53:56.912 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:53:56.912 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:53:56.912 -08 000000036 INF: ===================Camera #2 Frame #269===================
17-02-28 20:53:56.943 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:57.014 -08 000000104 INF: FPGA: Recv TDIYWAIT
17-02-28 20:53:57.014 -08 000000120 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:57.015 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:57.016 -08 000000120 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:53:57.017 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:53:57.017 -08 000000094 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:53:57.017 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:53:57.017 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:53:57.017 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:53:57.017 -08 000000094 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:53:57.017 -08 000000094 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:53:57.017 -08 000000094 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:53:57.017 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:53:57.020 -08 000000094 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:53:57.066 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:57.066 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:57.066 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:57.066 -08 000000109 INF: ===================Camera #0 Frame #272===================
17-02-28 20:53:57.078 -08 000000109 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:57.079 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:57.079 -08 000000109 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:57.204 -08 000000077 INF: Y Motor: Unshifted Position: 1025667
17-02-28 20:53:57.240 -08 000000109 INF: Camera #0 ReleaseBuffer
17-02-28 20:53:57.240 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:53:57.240 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:53:57.240 -08 000000036 INF: ===================Camera #2 Frame #272===================
17-02-28 20:53:57.240 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:53:57.250 -08 000000036 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:53:57.251 -08 000000036 INF: ===================CameraTDI Cleanup===================
17-02-28 20:53:57.254 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:57.274 -08 000000109 INF: ======================================
17-02-28 20:53:57.329 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:57.388 -08 000000029 INF: FPGA: Recv EX1MV
17-02-28 20:53:57.388 -08 000000029 INF: FPGA: Recv EX2MV
17-02-28 20:53:57.388 -08 000000094 INF: Excitation Filter 2: Moved 107 steps in 370.8376 ms
17-02-28 20:53:57.388 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 371.0463 ms
17-02-28 20:53:57.388 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.1459 ms
17-02-28 20:53:57.388 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.2151 ms
17-02-28 20:53:57.388 -08 000000094 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.9459 ms
17-02-28 20:53:57.388 -08 000000094 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.3337 ms
17-02-28 20:53:57.388 -08 000000032 INF: ======================================
17-02-28 20:53:57.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:57.389 -08 000000094 INF: ======================================
17-02-28 20:53:57.390 -08 000000077 INF: Y Motor: Unshifted Position: 991199
17-02-28 20:53:57.390 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:53:57.390 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:57.390 -08 000000120 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:53:57.391 -08 000000120 INF: ======================================
17-02-28 20:53:57.449 -08 000000036 INF: Camera #2 ReleaseBuffer
17-02-28 20:53:57.449 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:53:57.456 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:53:57.456 -08 000000077 INF: Y Motor: Moved to 14.9120 after 7864 ms
17-02-28 20:53:57.456 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:53:57.483 -08 000000036 INF: ======================================
17-02-28 20:53:57.484 -08 000000097 INF: ===================Camera TDI===================
17-02-28 20:53:57.486 -08 000000097 INF: ======================================
17-02-28 20:53:57.517 -08 000000077 INF: Y Motor: Recv v 4097\r
17-02-28 20:53:57.517 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:53:57.517 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:57.580 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:53:57.580 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:57.580 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:53:57.639 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:57.641 -08 000000077 INF: Y Motor: Recv v 134217728\r
17-02-28 20:53:57.641 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:53:57.641 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:53:57.641 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:53:57.688 -08 000000071 INF: RunCopyService queue size at 2/28/2017 8:53:57 PM is 0
17-02-28 20:53:57.701 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:57.702 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:53:57.702 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:53:57.702 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:53:57.702 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:57.765 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:53:57.765 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:53:57.765 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:57.827 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:53:57.827 -08 000000077 INF: ======================================
17-02-28 20:53:57.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:57.829 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:53:57.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:57.830 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:53:57.890 -08 000000059 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:53:57.890 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:53:57.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:57.954 -08 000000062 INF: FPGA: Recv TDIYERD 1491200
17-02-28 20:53:57.954 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:53:58.014 -08 000000060 INF: FPGA: Recv ZADCR 35326
17-02-28 20:53:58.014 -08 000000042 INF: At scan end Y pos = 14.912 and Z pos = -0.135. Y moved -48.539 mm
17-02-28 20:53:58.014 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:53:58.016 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:58.076 -08 000000061 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:53:58.076 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:53:58.076 -08 000000042 INF: TDIScan finished after 12553.5789 ms
17-02-28 20:53:58.076 -08 000000042 INF: Image[0]: Y should trigger at 63.451 mm, 2nd row was at 64.360 mm (error = 0.909 mm)
17-02-28 20:53:58.076 -08 000000042 INF: Image[2]: Y should trigger at 63.451 mm, 2nd row was at 64.360 mm (error = 0.909 mm)
17-02-28 20:53:58.078 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.110 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.692 um
17-02-28 20:53:58.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.111 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:53:58.137 -08 000000092 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:53:58.137 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.138 -08 000000009 INF: ===================Dither Clean Up Command===================
17-02-28 20:53:58.138 -08 000000055 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:53:58.138 -08 000000036 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:53:58.138 -08 000000107 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:53:58.138 -08 000000036 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:53:58.138 -08 000000036 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:53:58.138 -08 000000107 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:53:58.139 -08 000000107 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:53:58.139 -08 000000055 INF: ======================================
17-02-28 20:53:58.139 -08 000000120 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:58.139 -08 000000123 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:58.140 -08 000000120 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:53:58.142 -08 000000123 INF: ===================LFT:Extracting coords===================
17-02-28 20:53:58.167 -08 000000123 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:58.168 -08 000000123 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:53:58.169 -08 000000061 INF: ===================LookupFocusTracking===================
17-02-28 20:53:58.169 -08 000000037 INF: ===================LookupFocusTracking===================
17-02-28 20:53:58.169 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:53:58.169 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:53:58.169 -08 000000061 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:58.169 -08 000000037 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:58.169 -08 000000062 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:58.169 -08 000000077 INF: ===================Lookup Focus Tracking===================
17-02-28 20:53:58.202 -08 000000129 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:58.202 -08 000000129 INF: FPGA: Recv ZSEL 
17-02-28 20:53:58.202 -08 000000120 INF: FPGA: Xmit ZDACW 40546\n
17-02-28 20:53:58.202 -08 000000107 INF: ======================================
17-02-28 20:53:58.204 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:53:58.204 -08 000000036 INF: ======================================
17-02-28 20:53:58.245 -08 000000061 INF: FC:B, C:5,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:58.245 -08 000000037 INF: FC:B, C:5,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:58.245 -08 000000062 INF: FC:B, C:5,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:58.246 -08 000000077 INF: FC:B, C:5,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:53:58.262 -08 000000052 INF: FPGA: Recv ZDACW 
17-02-28 20:53:58.262 -08 000000120 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:53:58.262 -08 000000120 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:53:58.266 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:58.324 -08 000000031 INF: FPGA: Recv TDIBB
17-02-28 20:53:58.324 -08 000000120 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:53:58.325 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:58.325 -08 000000120 INF: ======================================
17-02-28 20:53:58.397 -08 000000061 INF: LFT found best fwhm score 2.000033 in 152 ms
17-02-28 20:53:58.397 -08 000000061 INF: LFT found good score at index 5101 with fwhm value 2.000033. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:4,T
17-02-28 20:53:58.397 -08 000000062 INF: LFT found best fwhm score 2.077221 in 152 ms
17-02-28 20:53:58.397 -08 000000037 INF: LFT found best fwhm score 2.000397 in 152 ms
17-02-28 20:53:58.397 -08 000000062 INF: LFT found good score at index 2181 with fwhm value 2.077221. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:4,T
17-02-28 20:53:58.398 -08 000000077 INF: LFT found best fwhm score 2.000005 in 152 ms
17-02-28 20:53:58.398 -08 000000077 INF: LFT found good score at index 8749 with fwhm value 2.000005. Next cycle, cycle 6 starting Z position for top surface is at -0.156 mm FC:B, C:5,L:4,T
17-02-28 20:53:58.398 -08 000000061 INF: ===================LookupFocusTracking===================
17-02-28 20:53:58.398 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:53:58.398 -08 000000037 INF: LFT found good score at index 753 with fwhm value 2.000397. Next cycle, cycle 6 starting Z position for top surface is at -0.158 mm FC:B, C:5,L:4,T
17-02-28 20:53:58.398 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:53:58.398 -08 000000037 INF: ===================LookupFocusTracking===================
17-02-28 20:53:58.398 -08 000000061 INF: ======================================
17-02-28 20:53:58.398 -08 000000077 INF: ======================================
17-02-28 20:53:58.398 -08 000000037 INF: ======================================
17-02-28 20:53:58.399 -08 000000062 INF: ======================================
17-02-28 20:53:58.400 -08 000000123 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:53:58.401 -08 000000123 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:5,L:4,T
17-02-28 20:53:58.401 -08 000000123 INF: ======================================
17-02-28 20:53:58.402 -08 000000009 INF: ======================================
17-02-28 20:53:58.403 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:53:58.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:53:58.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:53:58.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:53:58.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:53:58.406 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:53:58.406 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:53:58.406 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:53:58.407 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:53:58.407 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:53:58.430 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:53:58.430 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:53:58.430 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:58.430 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:53:58.430 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:53:58.431 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:53:58.431 -08 000000042 INF: Transformed XStagePosition from 78.03464 mm to 78.0135924518108 mm.
17-02-28 20:53:58.475 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.559989355389 mm.
17-02-28 20:53:58.476 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.359989355389 mm.
17-02-28 20:53:58.476 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.450739355389 mm.
17-02-28 20:53:58.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:53:58.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:53:58.479 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -154.7 um, section = D_1
17-02-28 20:53:58.483 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:58.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:53:58.494 -08 000000052 INF: ===================MoveEmissionFilters===================
17-02-28 20:53:58.495 -08 000000126 INF: ===================Move X,Y===================
17-02-28 20:53:58.496 -08 000000126 INF: ===================Move X,Y, Parallel===================
17-02-28 20:53:58.496 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:58.497 -08 000000009 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:58.497 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:53:58.497 -08 000000084 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:53:58.498 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:58.499 -08 000000009 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:58.499 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:53:58.502 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:58.502 -08 000000122 INF: ===================Move X Motor without settling===================
17-02-28 20:53:58.503 -08 000000122 INF: X Motor: Xmit PR VM\n
17-02-28 20:53:58.503 -08 000000027 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:53:58.503 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:58.503 -08 000000027 INF: ======================================
17-02-28 20:53:58.504 -08 000000118 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:58.505 -08 000000118 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:53:58.505 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:58.505 -08 000000080 INF: ===================TDI Scan Setup===================
17-02-28 20:53:58.505 -08 000000096 INF: ===================Move Y Motor without settling===================
17-02-28 20:53:58.505 -08 000000027 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:53:58.506 -08 000000027 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:53:58.506 -08 000000123 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:53:58.506 -08 000000027 INF: ======================================
17-02-28 20:53:58.506 -08 000000123 INF: ======================================
17-02-28 20:53:58.507 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:53:58.507 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1102 Request: {"Cycle":5,"Lane":4,"Tile":1102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF258","HCSMMF184","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.507 -08 000000096 INF: Y Motor: Moving to 64.5600 mm @25.000 mm/sec, started at 14.9120 mm
17-02-28 20:53:58.508 -08 000000080 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:58.508 -08 000000096 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:53:58.508 -08 000000096 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:53:58.508 -08 000000027 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:53:58.508 -08 000000123 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:53:58.509 -08 000000027 INF: ======================================
17-02-28 20:53:58.509 -08 000000123 INF: ======================================
17-02-28 20:53:58.510 -08 000000109 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:53:58.510 -08 000000080 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:58.510 -08 000000109 INF: ======================================
17-02-28 20:53:58.510 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:53:58.511 -08 000000027 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:53:58.511 -08 000000080 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:58.511 -08 000000009 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:53:58.511 -08 000000080 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:53:58.511 -08 000000027 INF: ======================================
17-02-28 20:53:58.512 -08 000000035 INF: ======================================
17-02-28 20:53:58.513 -08 000000104 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:53:58.513 -08 000000124 INF: ===================Camera Arm TDI===================
17-02-28 20:53:58.513 -08 000000104 INF: ======================================
17-02-28 20:53:58.514 -08 000000009 INF: ======================================
17-02-28 20:53:58.514 -08 000000124 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:58.515 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:53:58.515 -08 000000124 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:58.517 -08 000000064 INF: ======================================
17-02-28 20:53:58.536 -08 000000118 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:53:58.538 -08 000000118 INF: ======================================
17-02-28 20:53:58.539 -08 000000052 INF: ======================================
17-02-28 20:53:58.556 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1103 Request: {"Cycle":5,"Lane":4,"Tile":1103,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF239","HCSMMF229","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.565 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1110 Request: {"Cycle":5,"Lane":4,"Tile":1110,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF267","HCSMMF188","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.578 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:58.593 -08 000000119 INF: FPGA: Recv ZSEL 
17-02-28 20:53:58.594 -08 000000122 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:53:58.594 -08 000000122 INF: X Motor: Xmit PR VI\n
17-02-28 20:53:58.595 -08 000000080 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:58.595 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:53:58.595 -08 000000096 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:53:58.595 -08 000000096 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:53:58.595 -08 000000080 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:53:58.627 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1109 Request: {"Cycle":5,"Lane":4,"Tile":1109,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF279","HCSMMF210","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.637 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1114 Request: {"Cycle":5,"Lane":4,"Tile":1114,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF241","HCSMMF202","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.639 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1108 Request: {"Cycle":5,"Lane":4,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF254","HCSMMF227","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.640 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1107 Request: {"Cycle":5,"Lane":4,"Tile":1107,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF255","HCSMMF216","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.641 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1101 Request: {"Cycle":5,"Lane":4,"Tile":1101,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF193","HCSMMF286","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.649 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1104 Request: {"Cycle":5,"Lane":4,"Tile":1104,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF266","HCSMMF264","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.650 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1111 Request: {"Cycle":5,"Lane":4,"Tile":1111,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF204","HCSMMF181","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.652 -08 000000071 INF: FPGA: Recv TDIBB
17-02-28 20:53:58.652 -08 000000080 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:53:58.652 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1115 Request: {"Cycle":5,"Lane":4,"Tile":1115,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF220","HCSMMF180","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.653 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:58.654 -08 000000122 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:53:58.654 -08 000000122 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:53:58.654 -08 000000122 INF: X Motor: Moving to 78.0136 mm @15.000 mm/sec, started at 76.9126 mm
17-02-28 20:53:58.654 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:53:58.654 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:53:58.654 -08 000000122 INF: X Motor: Xmit MA 7788\n
17-02-28 20:53:58.654 -08 000000080 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:53:58.655 -08 000000080 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:58.658 -08 000000080 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:53:58.658 -08 000000080 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:53:58.658 -08 000000080 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:53:58.658 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1119 Request: {"Cycle":5,"Lane":4,"Tile":1119,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF240","HCSMMF268","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.660 -08 000000120 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1112 Request: {"Cycle":5,"Lane":4,"Tile":1112,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF182","HCSMMF194","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.661 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1117 Request: {"Cycle":5,"Lane":4,"Tile":1117,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF283","HCSMMF208","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.663 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1106 Request: {"Cycle":5,"Lane":4,"Tile":1106,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF189","HCSMMF250","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.664 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1113 Request: {"Cycle":5,"Lane":4,"Tile":1113,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF249","HCSMMF275","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.668 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1105 Request: {"Cycle":5,"Lane":4,"Tile":1105,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF230","HCSMMF270","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.671 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1121 Request: {"Cycle":5,"Lane":4,"Tile":1121,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF190","HCSMMF280","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.680 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1118 Request: {"Cycle":5,"Lane":4,"Tile":1118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF214","HCSMMF278","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.683 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1120 Request: {"Cycle":5,"Lane":4,"Tile":1120,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF253","HCSMMF248","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.689 -08 000000107 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1116 Request: {"Cycle":5,"Lane":4,"Tile":1116,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF261","HCSMMF235","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.693 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1123 Request: {"Cycle":5,"Lane":4,"Tile":1123,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF195","HCSMMF272","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.699 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1125 Request: {"Cycle":5,"Lane":4,"Tile":1125,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF232","HCSMMF281","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.700 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1122 Request: {"Cycle":5,"Lane":4,"Tile":1122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF207","HCSMMF234","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.702 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1124 Request: {"Cycle":5,"Lane":4,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF218","HCSMMF200","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.705 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1126 Request: {"Cycle":5,"Lane":4,"Tile":1126,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF186","HCSMMF245","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.709 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1127 Request: {"Cycle":5,"Lane":4,"Tile":1127,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF273","HCSMMF251","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.714 -08 000000111 INF: FPGA: Recv ZSTEP 
17-02-28 20:53:58.714 -08 000000080 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:58.716 -08 000000096 INF: Y Motor: Recv v 0\r
17-02-28 20:53:58.716 -08 000000096 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:53:58.716 -08 000000122 INF: X Motor: Recv MA 7788\r\n>
17-02-28 20:53:58.716 -08 000000096 INF: Y Motor: Set target position to 5955999 encoder counts
17-02-28 20:53:58.716 -08 000000096 INF: Y Motor: Xmit s r0xca 5955999\r
17-02-28 20:53:58.716 -08 000000080 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:53:58.716 -08 000000122 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:53:58.716 -08 000000080 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:58.718 -08 000000080 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:53:58.718 -08 000000080 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:53:58.718 -08 000000080 INF: Z Motor: Arming to move to -0.1147 mm
17-02-28 20:53:58.718 -08 000000080 INF: FPGA: Xmit ZYT 6435999 4\n
17-02-28 20:53:58.720 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1128 Request: {"Cycle":5,"Lane":4,"Tile":1128,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF257","HCSMMF192","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:53:58.735 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:58.741 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:53:58.777 -08 000000094 INF: FPGA: Recv ZYT 
17-02-28 20:53:58.777 -08 000000080 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1491199 enc / 14.912 mm / ) = 6435999 enc / 64.360 mm
17-02-28 20:53:58.777 -08 000000080 INF: FPGA: Xmit ZARM 30060\n
17-02-28 20:53:58.779 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:53:58.779 -08 000000096 INF: Y Motor: Start the move command
17-02-28 20:53:58.779 -08 000000096 INF: Y Motor: Xmit t 1\r
17-02-28 20:53:58.825 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:58.825 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:53:58.841 -08 000000009 INF: FPGA: Recv ZARM
17-02-28 20:53:58.841 -08 000000080 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.7098 ms
17-02-28 20:53:58.841 -08 000000080 INF: Z Motor: ArmAbsStepped took 122.7393 ms
17-02-28 20:53:58.841 -08 000000080 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:53:58.843 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:53:58.843 -08 000000080 INF: ===================TDI Scan Setup===================
17-02-28 20:53:58.843 -08 000000096 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:53:58.843 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:58.844 -08 000000080 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:53:58.845 -08 000000080 INF: ===================TDI Scan Setup===================
17-02-28 20:53:58.846 -08 000000080 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:53:58.846 -08 000000080 INF: ===================TDI Scan Setup===================
17-02-28 20:53:58.848 -08 000000080 INF: ======================================
17-02-28 20:53:58.861 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:58.867 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:53:58.903 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:58.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:58.969 -08 000000096 INF: Y Motor: Unshifted Position: 1077901
17-02-28 20:53:58.977 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:58.983 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:53:59.019 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:59.084 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:59.090 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:53:59.125 -08 000000124 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:59.125 -08 000000124 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:59.126 -08 000000124 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:59.141 -08 000000124 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:59.143 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:59.143 -08 000000124 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:53:59.195 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:53:59.217 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:59.278 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:59.278 -08 000000096 INF: Y Motor: Unshifted Position: 1782857
17-02-28 20:53:59.328 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:59.340 -08 000000122 INF: X Motor: Xmit PR ER\n
17-02-28 20:53:59.403 -08 000000122 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:53:59.403 -08 000000122 INF: X Motor: Moved to 78.0137 after 687 ms
17-02-28 20:53:59.403 -08 000000122 INF: ======================================
17-02-28 20:53:59.453 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:59.508 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:53:59.528 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:59.590 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:59.591 -08 000000096 INF: Y Motor: Unshifted Position: 2563713
17-02-28 20:53:59.641 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:59.748 -08 000000124 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:53:59.748 -08 000000124 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:53:59.748 -08 000000124 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:53:59.763 -08 000000124 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:53:59.765 -08 000000124 INF: ===================Camera Arm TDI===================
17-02-28 20:53:59.766 -08 000000124 INF: ======================================
17-02-28 20:53:59.767 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:53:59.768 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:53:59.769 -08 000000084 INF: ======================================
17-02-28 20:53:59.840 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:53:59.902 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:53:59.903 -08 000000096 INF: Y Motor: Unshifted Position: 3351154
17-02-28 20:53:59.953 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:00.080 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:00.152 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:00.217 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:00.217 -08 000000096 INF: Y Motor: Unshifted Position: 4119568
17-02-28 20:54:00.267 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:00.390 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:00.467 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:00.527 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:00.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:00.528 -08 000000096 INF: Y Motor: Unshifted Position: 4902008
17-02-28 20:54:00.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:00.528 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:54:00.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:54:00.578 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:00.720 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:00.853 -08 000000096 INF: Y Motor: Unshifted Position: 5715242
17-02-28 20:54:00.903 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:01.030 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:01.167 -08 000000096 INF: Y Motor: Unshifted Position: 5956001
17-02-28 20:54:01.167 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:54:01.167 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:01.228 -08 000000096 INF: Y Motor: Recv v 0\r
17-02-28 20:54:01.228 -08 000000096 INF: Y Motor: Moved to 64.5600 after 2385 ms
17-02-28 20:54:01.228 -08 000000096 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:54:01.290 -08 000000096 INF: Y Motor: Recv v 4096\r
17-02-28 20:54:01.290 -08 000000096 INF: Y Motor: Status After move finished OK:
17-02-28 20:54:01.290 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:01.358 -08 000000096 INF: Y Motor: Recv v 0\r
17-02-28 20:54:01.358 -08 000000096 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:01.358 -08 000000096 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:54:01.416 -08 000000096 INF: Y Motor: Recv v 402653184\r
17-02-28 20:54:01.416 -08 000000096 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:54:01.416 -08 000000096 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:54:01.416 -08 000000096 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:54:01.477 -08 000000096 INF: Y Motor: Recv v 0\r
17-02-28 20:54:01.477 -08 000000096 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:54:01.477 -08 000000096 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:54:01.477 -08 000000096 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:01.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:01.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:54:01.542 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:54:01.542 -08 000000096 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:54:01.542 -08 000000096 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:01.604 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:54:01.604 -08 000000096 INF: ======================================
17-02-28 20:54:01.605 -08 000000126 INF: ===================Move X,Y===================
17-02-28 20:54:01.607 -08 000000126 INF: ======================================
17-02-28 20:54:01.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:54:01.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:01.609 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:54:01.609 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:54:01.666 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:54:01.666 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:54:01.726 -08 000000077 INF: FPGA: Recv ZFREQCL
17-02-28 20:54:01.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:54:01.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:01.727 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:54:01.788 -08 000000051 INF: FPGA: Recv TDIYERD 6456001
17-02-28 20:54:01.788 -08 000000042 INF: Before scan, Y encoder from FPGA = 6456001 counts (64.560 mm)
17-02-28 20:54:01.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:01.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:01.790 -08 000000009 INF: ===================TDI FPGA Arm===================
17-02-28 20:54:01.790 -08 000000052 INF: ===================Set YMotor gains for scans===================
17-02-28 20:54:01.790 -08 000000052 INF: ======================================
17-02-28 20:54:01.790 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:01.791 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:54:01.791 -08 000000009 INF: FPGA: Xmit TDIYPOS 6345074\n
17-02-28 20:54:01.850 -08 000000122 INF: FPGA: Recv TDIYPOS
17-02-28 20:54:01.850 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:01.852 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:54:01.852 -08 000000009 INF: FPGA: Xmit TDIYARM3 139264 6435999 1 1\n
17-02-28 20:54:01.912 -08 000000051 INF: FPGA: Recv TDIYARM3
17-02-28 20:54:01.912 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:01.914 -08 000000009 INF: ===================TDI FPGA Arm===================
17-02-28 20:54:01.915 -08 000000009 INF: ======================================
17-02-28 20:54:01.916 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:01.916 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:01.917 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:01.917 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:01.918 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:01.918 -08 000000037 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:54:01.919 -08 000000077 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:54:01.919 -08 000000037 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:54:01.919 -08 000000037 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:54:01.919 -08 000000037 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:54:01.919 -08 000000077 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:54:01.919 -08 000000037 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:54:01.919 -08 000000077 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:54:01.919 -08 000000077 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:54:01.920 -08 000000077 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:54:02.289 -08 000000036 INF: FPGA: Recv EX2MV
17-02-28 20:54:02.289 -08 000000036 INF: FPGA: Recv EX1MV
17-02-28 20:54:02.289 -08 000000077 INF: Excitation Filter 1: Moved -107 steps in 370.3046 ms
17-02-28 20:54:02.289 -08 000000077 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 370.5514 ms
17-02-28 20:54:02.289 -08 000000037 INF: Excitation Filter 2: Moved -107 steps in 370.6848 ms
17-02-28 20:54:02.289 -08 000000077 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 370.6479 ms
17-02-28 20:54:02.289 -08 000000037 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 370.8026 ms
17-02-28 20:54:02.290 -08 000000037 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.917 ms
17-02-28 20:54:02.290 -08 000000077 INF: ======================================
17-02-28 20:54:02.290 -08 000000037 INF: ======================================
17-02-28 20:54:02.291 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:02.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:02.293 -08 000000056 INF: ===================Camera TDI===================
17-02-28 20:54:02.293 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:54:02.293 -08 000000120 INF: ===================Move Y Motor without settling===================
17-02-28 20:54:02.294 -08 000000120 INF: Y Motor: Moving to 14.9117 mm @6.500 mm/sec, started at 64.5600 mm
17-02-28 20:54:02.294 -08 000000070 INF: ===================FPGA Z Wait===================
17-02-28 20:54:02.294 -08 000000120 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:54:02.294 -08 000000120 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:02.294 -08 000000056 INF: ===================Camera TDI, Parallel===================
17-02-28 20:54:02.294 -08 000000031 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:54:02.294 -08 000000070 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:54:02.295 -08 000000126 INF: ===================Camera TDI===================
17-02-28 20:54:02.295 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:54:02.297 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:02.297 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:02.298 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:02.298 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:02.317 -08 000000031 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:54:02.352 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:54:02.352 -08 000000120 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:54:02.352 -08 000000120 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:02.415 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:54:02.415 -08 000000120 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:02.447 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:02.447 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:02.448 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:02.448 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:02.478 -08 000000120 INF: Y Motor: Recv v 0\r
17-02-28 20:54:02.478 -08 000000120 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:02.478 -08 000000120 INF: Y Motor: Set target position to 991165 encoder counts
17-02-28 20:54:02.478 -08 000000120 INF: Y Motor: Xmit s r0xca 991165\r
17-02-28 20:54:02.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:02.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:54:02.539 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:54:02.539 -08 000000120 INF: Y Motor: Start the move command
17-02-28 20:54:02.539 -08 000000120 INF: Y Motor: Xmit t 1\r
17-02-28 20:54:02.597 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:02.597 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:02.598 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:02.598 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:02.601 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:54:02.601 -08 000000120 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:54:02.601 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:02.661 -08 000000129 INF: FPGA: Recv ZWAIT 
17-02-28 20:54:02.661 -08 000000070 INF: ======================================
17-02-28 20:54:02.725 -08 000000120 INF: Y Motor: Unshifted Position: 5894149
17-02-28 20:54:02.747 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:54:02.747 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:54:02.747 -08 000000126 INF: ===================Camera #2 Frame #5===================
17-02-28 20:54:02.748 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:54:02.748 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:54:02.748 -08 000000067 INF: ===================Camera #0 Frame #5===================
17-02-28 20:54:02.775 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:02.905 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:02.913 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:54:02.913 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:54:02.913 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:54:02.913 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:54:02.913 -08 000000126 INF: ===================Camera #2 Frame #11===================
17-02-28 20:54:02.913 -08 000000067 INF: ===================Camera #0 Frame #11===================
17-02-28 20:54:03.037 -08 000000120 INF: Y Motor: Unshifted Position: 5691350
17-02-28 20:54:03.081 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:54:03.081 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:54:03.081 -08 000000067 INF: ===================Camera #0 Frame #17===================
17-02-28 20:54:03.084 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:54:03.084 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:54:03.084 -08 000000126 INF: ===================Camera #2 Frame #17===================
17-02-28 20:54:03.087 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:03.214 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:03.249 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:54:03.249 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:54:03.249 -08 000000067 INF: ===================Camera #0 Frame #23===================
17-02-28 20:54:03.264 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:54:03.264 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:54:03.264 -08 000000126 INF: ===================Camera #2 Frame #24===================
17-02-28 20:54:03.350 -08 000000120 INF: Y Motor: Unshifted Position: 5487687
17-02-28 20:54:03.400 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:03.423 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:54:03.423 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:54:03.423 -08 000000067 INF: ===================Camera #0 Frame #30===================
17-02-28 20:54:03.437 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:54:03.437 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:54:03.437 -08 000000126 INF: ===================Camera #2 Frame #30===================
17-02-28 20:54:03.524 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:03.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:03.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:54:03.594 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:54:03.594 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:54:03.594 -08 000000067 INF: ===================Camera #0 Frame #36===================
17-02-28 20:54:03.612 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:54:03.612 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:54:03.612 -08 000000126 INF: ===================Camera #2 Frame #36===================
17-02-28 20:54:03.662 -08 000000120 INF: Y Motor: Unshifted Position: 5284885
17-02-28 20:54:03.712 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:03.763 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:54:03.763 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:54:03.763 -08 000000067 INF: ===================Camera #0 Frame #42===================
17-02-28 20:54:03.788 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:54:03.788 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:54:03.788 -08 000000126 INF: ===================Camera #2 Frame #43===================
17-02-28 20:54:03.836 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:03.932 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:54:03.932 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:54:03.932 -08 000000067 INF: ===================Camera #0 Frame #48===================
17-02-28 20:54:03.962 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:54:03.962 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:54:03.962 -08 000000126 INF: ===================Camera #2 Frame #49===================
17-02-28 20:54:03.974 -08 000000120 INF: Y Motor: Unshifted Position: 5082511
17-02-28 20:54:04.024 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:04.106 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:54:04.106 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:54:04.106 -08 000000067 INF: ===================Camera #0 Frame #55===================
17-02-28 20:54:04.139 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:54:04.139 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:54:04.139 -08 000000126 INF: ===================Camera #2 Frame #56===================
17-02-28 20:54:04.150 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:04.278 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:54:04.278 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:54:04.278 -08 000000067 INF: ===================Camera #0 Frame #61===================
17-02-28 20:54:04.286 -08 000000120 INF: Y Motor: Unshifted Position: 4879062
17-02-28 20:54:04.314 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:54:04.314 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:54:04.314 -08 000000126 INF: ===================Camera #2 Frame #62===================
17-02-28 20:54:04.336 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:04.446 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:54:04.446 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:54:04.446 -08 000000067 INF: ===================Camera #0 Frame #67===================
17-02-28 20:54:04.460 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:04.485 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:54:04.485 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:54:04.485 -08 000000126 INF: ===================Camera #2 Frame #69===================
17-02-28 20:54:04.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:04.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:54:04.599 -08 000000120 INF: Y Motor: Unshifted Position: 4675394
17-02-28 20:54:04.614 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:54:04.614 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:54:04.614 -08 000000067 INF: ===================Camera #0 Frame #73===================
17-02-28 20:54:04.649 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:04.659 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:54:04.659 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:54:04.659 -08 000000126 INF: ===================Camera #2 Frame #75===================
17-02-28 20:54:04.773 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:04.782 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:54:04.782 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:54:04.782 -08 000000067 INF: ===================Camera #0 Frame #80===================
17-02-28 20:54:04.830 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:54:04.830 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:54:04.830 -08 000000126 INF: ===================Camera #2 Frame #81===================
17-02-28 20:54:04.909 -08 000000120 INF: Y Motor: Unshifted Position: 4473665
17-02-28 20:54:04.954 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:54:04.954 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:54:04.954 -08 000000067 INF: ===================Camera #0 Frame #86===================
17-02-28 20:54:04.959 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:05.002 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:54:05.002 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:54:05.002 -08 000000126 INF: ===================Camera #2 Frame #88===================
17-02-28 20:54:05.086 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:05.123 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:54:05.123 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:54:05.123 -08 000000067 INF: ===================Camera #0 Frame #92===================
17-02-28 20:54:05.177 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:54:05.177 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:54:05.177 -08 000000126 INF: ===================Camera #2 Frame #94===================
17-02-28 20:54:05.222 -08 000000120 INF: Y Motor: Unshifted Position: 4270226
17-02-28 20:54:05.272 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:05.292 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:54:05.292 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:54:05.292 -08 000000067 INF: ===================Camera #0 Frame #98===================
17-02-28 20:54:05.349 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:54:05.349 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:54:05.349 -08 000000126 INF: ===================Camera #2 Frame #100===================
17-02-28 20:54:05.398 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:05.460 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:54:05.460 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:54:05.460 -08 000000067 INF: ===================Camera #0 Frame #105===================
17-02-28 20:54:05.519 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:54:05.519 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:54:05.519 -08 000000126 INF: ===================Camera #2 Frame #107===================
17-02-28 20:54:05.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:05.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 0 of 5 seconds left===================
17-02-28 20:54:05.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:05.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:05.529 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:54:05.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:05.535 -08 000000120 INF: Y Motor: Unshifted Position: 4066763
17-02-28 20:54:05.585 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:05.627 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:54:05.631 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:54:05.631 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:54:05.631 -08 000000067 INF: ===================Camera #0 Frame #111===================
17-02-28 20:54:05.691 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:54:05.691 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:54:05.691 -08 000000126 INF: ===================Camera #2 Frame #113===================
17-02-28 20:54:05.709 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:05.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:54:05.720 -08 000000018 INF: Current Position of Pump is: 7680
17-02-28 20:54:05.799 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:54:05.799 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:54:05.799 -08 000000067 INF: ===================Camera #0 Frame #117===================
17-02-28 20:54:05.820 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:54:05.848 -08 000000120 INF: Y Motor: Unshifted Position: 3865048
17-02-28 20:54:05.861 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:54:05.861 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:54:05.861 -08 000000126 INF: ===================Camera #2 Frame #119===================
17-02-28 20:54:05.898 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:05.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:54:05.907 -08 000000018 INF: Current Position of Pump is: 7680
17-02-28 20:54:05.907 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:54:05.967 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:54:05.967 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:54:05.967 -08 000000067 INF: ===================Camera #0 Frame #123===================
17-02-28 20:54:06.007 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD7680R\r
17-02-28 20:54:06.020 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:06.030 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:54:06.030 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:54:06.030 -08 000000126 INF: ===================Camera #2 Frame #126===================
17-02-28 20:54:06.096 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:06.135 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:54:06.135 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:54:06.135 -08 000000067 INF: ===================Camera #0 Frame #129===================
17-02-28 20:54:06.159 -08 000000120 INF: Y Motor: Unshifted Position: 3660951
17-02-28 20:54:06.196 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:06.202 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:54:06.202 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:54:06.202 -08 000000126 INF: ===================Camera #2 Frame #132===================
17-02-28 20:54:06.209 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:06.282 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:06.304 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:54:06.304 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:54:06.304 -08 000000067 INF: ===================Camera #0 Frame #136===================
17-02-28 20:54:06.333 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:06.371 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:54:06.371 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:54:06.371 -08 000000126 INF: ===================Camera #2 Frame #138===================
17-02-28 20:54:06.470 -08 000000120 INF: Y Motor: Unshifted Position: 3459236
17-02-28 20:54:06.476 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:54:06.476 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:54:06.476 -08 000000067 INF: ===================Camera #0 Frame #142===================
17-02-28 20:54:06.520 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:06.533 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:06.541 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:54:06.541 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:54:06.541 -08 000000126 INF: ===================Camera #2 Frame #144===================
17-02-28 20:54:06.596 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:06.644 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:54:06.644 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:54:06.644 -08 000000067 INF: ===================Camera #0 Frame #148===================
17-02-28 20:54:06.647 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:06.730 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:54:06.730 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:54:06.731 -08 000000126 INF: ===================Camera #2 Frame #151===================
17-02-28 20:54:06.782 -08 000000120 INF: Y Motor: Unshifted Position: 3247765
17-02-28 20:54:06.812 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:54:06.812 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:54:06.812 -08 000000067 INF: ===================Camera #0 Frame #154===================
17-02-28 20:54:06.832 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:06.846 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:06.904 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:54:06.904 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:54:06.904 -08 000000126 INF: ===================Camera #2 Frame #158===================
17-02-28 20:54:06.908 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:06.959 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:06.981 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:54:06.981 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:54:06.981 -08 000000067 INF: ===================Camera #0 Frame #160===================
17-02-28 20:54:07.076 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:54:07.076 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:54:07.076 -08 000000126 INF: ===================Camera #2 Frame #164===================
17-02-28 20:54:07.097 -08 000000120 INF: Y Motor: Unshifted Position: 3052770
17-02-28 20:54:07.147 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:07.149 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:54:07.149 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:54:07.149 -08 000000067 INF: ===================Camera #0 Frame #167===================
17-02-28 20:54:07.158 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:07.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:07.245 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:54:07.245 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:54:07.245 -08 000000126 INF: ===================Camera #2 Frame #170===================
17-02-28 20:54:07.271 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:07.320 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:54:07.320 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:54:07.320 -08 000000067 INF: ===================Camera #0 Frame #173===================
17-02-28 20:54:07.408 -08 000000120 INF: Y Motor: Unshifted Position: 2849110
17-02-28 20:54:07.414 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:54:07.414 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:54:07.414 -08 000000126 INF: ===================Camera #2 Frame #176===================
17-02-28 20:54:07.458 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:07.471 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:07.490 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:54:07.490 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:54:07.490 -08 000000067 INF: ===================Camera #0 Frame #179===================
17-02-28 20:54:07.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:07.531 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:54:07.531 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:54:07.582 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:07.583 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:54:07.583 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:54:07.583 -08 000000126 INF: ===================Camera #2 Frame #183===================
17-02-28 20:54:07.660 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:54:07.660 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:54:07.660 -08 000000067 INF: ===================Camera #0 Frame #185===================
17-02-28 20:54:07.718 -08 000000120 INF: Y Motor: Unshifted Position: 2647394
17-02-28 20:54:07.756 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:54:07.756 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:54:07.756 -08 000000126 INF: ===================Camera #2 Frame #189===================
17-02-28 20:54:07.768 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:07.831 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:54:07.831 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:54:07.831 -08 000000067 INF: ===================Camera #0 Frame #192===================
17-02-28 20:54:07.895 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:07.927 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:54:07.927 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:54:07.927 -08 000000126 INF: ===================Camera #2 Frame #195===================
17-02-28 20:54:08.004 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:54:08.004 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:54:08.004 -08 000000067 INF: ===================Camera #0 Frame #198===================
17-02-28 20:54:08.032 -08 000000120 INF: Y Motor: Unshifted Position: 2443298
17-02-28 20:54:08.082 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:08.098 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:54:08.098 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:54:08.098 -08 000000126 INF: ===================Camera #2 Frame #202===================
17-02-28 20:54:08.174 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:54:08.174 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:54:08.174 -08 000000067 INF: ===================Camera #0 Frame #204===================
17-02-28 20:54:08.206 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:08.272 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:54:08.272 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:54:08.272 -08 000000126 INF: ===================Camera #2 Frame #208===================
17-02-28 20:54:08.342 -08 000000120 INF: Y Motor: Unshifted Position: 2241797
17-02-28 20:54:08.344 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:54:08.344 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:54:08.344 -08 000000067 INF: ===================Camera #0 Frame #211===================
17-02-28 20:54:08.392 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:08.443 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:54:08.443 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:54:08.443 -08 000000126 INF: ===================Camera #2 Frame #214===================
17-02-28 20:54:08.517 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:54:08.517 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:54:08.517 -08 000000067 INF: ===================Camera #0 Frame #217===================
17-02-28 20:54:08.519 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:08.614 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:54:08.614 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:54:08.614 -08 000000126 INF: ===================Camera #2 Frame #221===================
17-02-28 20:54:08.631 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:54:08.657 -08 000000120 INF: Y Motor: Unshifted Position: 2038135
17-02-28 20:54:08.687 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:54:08.687 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:54:08.687 -08 000000067 INF: ===================Camera #0 Frame #223===================
17-02-28 20:54:08.707 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:08.716 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:08.788 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:54:08.788 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:54:08.788 -08 000000126 INF: ===================Camera #2 Frame #227===================
17-02-28 20:54:08.816 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:08.830 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:08.857 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:54:08.857 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:54:08.857 -08 000000067 INF: ===================Camera #0 Frame #230===================
17-02-28 20:54:08.903 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:08.959 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:54:08.959 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:54:08.959 -08 000000126 INF: ===================Camera #2 Frame #233===================
17-02-28 20:54:08.966 -08 000000120 INF: Y Motor: Unshifted Position: 1835980
17-02-28 20:54:09.016 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:09.028 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:54:09.028 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:54:09.028 -08 000000067 INF: ===================Camera #0 Frame #236===================
17-02-28 20:54:09.129 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:54:09.129 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:54:09.129 -08 000000126 INF: ===================Camera #2 Frame #240===================
17-02-28 20:54:09.143 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:09.153 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:09.197 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:54:09.197 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:54:09.197 -08 000000067 INF: ===================Camera #0 Frame #242===================
17-02-28 20:54:09.216 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:09.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:54:09.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:54:09.279 -08 000000120 INF: Y Motor: Unshifted Position: 1632311
17-02-28 20:54:09.302 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:54:09.302 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:54:09.302 -08 000000126 INF: ===================Camera #2 Frame #246===================
17-02-28 20:54:09.329 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:09.367 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:54:09.367 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:54:09.367 -08 000000067 INF: ===================Camera #0 Frame #248===================
17-02-28 20:54:09.453 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:09.470 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:54:09.470 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:54:09.470 -08 000000126 INF: ===================Camera #2 Frame #252===================
17-02-28 20:54:09.537 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:54:09.537 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:54:09.537 -08 000000067 INF: ===================Camera #0 Frame #255===================
17-02-28 20:54:09.592 -08 000000120 INF: Y Motor: Unshifted Position: 1428859
17-02-28 20:54:09.641 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:54:09.641 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:54:09.641 -08 000000126 INF: ===================Camera #2 Frame #258===================
17-02-28 20:54:09.642 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:09.708 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:54:09.708 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:54:09.708 -08 000000067 INF: ===================Camera #0 Frame #261===================
17-02-28 20:54:09.766 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:09.811 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:54:09.811 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:54:09.811 -08 000000126 INF: ===================Camera #2 Frame #265===================
17-02-28 20:54:09.878 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:54:09.878 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:54:09.878 -08 000000067 INF: ===================Camera #0 Frame #267===================
17-02-28 20:54:09.900 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:54:09.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:54:09.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:54:09.902 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle===================
17-02-28 20:54:09.903 -08 000000120 INF: Y Motor: Unshifted Position: 1227130
17-02-28 20:54:09.903 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:09.903 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:09.904 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:09.904 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:54:09.904 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:54:09.904 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°===================
17-02-28 20:54:09.953 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:09.985 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:54:09.985 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:54:09.985 -08 000000126 INF: ===================Camera #2 Frame #271===================
17-02-28 20:54:10.027 -08 000000118 INF: FPGA: Recv TDIYWAIT
17-02-28 20:54:10.027 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:54:10.029 -08 000000031 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:54:10.030 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:54:10.030 -08 000000036 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:54:10.030 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:54:10.030 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:54:10.030 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:54:10.030 -08 000000036 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:54:10.030 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:54:10.030 -08 000000036 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:54:10.030 -08 000000036 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:54:10.031 -08 000000036 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:54:10.047 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:54:10.047 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:54:10.047 -08 000000067 INF: ===================Camera #0 Frame #272===================
17-02-28 20:54:10.063 -08 000000067 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:54:10.064 -08 000000067 INF: ===================CameraTDI Cleanup===================
17-02-28 20:54:10.079 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:10.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:54:10.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:54:10.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:54:10.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:54:10.153 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:10.153 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:10.154 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:10.154 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:10.196 -08 000000067 INF: Camera #0 ReleaseBuffer
17-02-28 20:54:10.196 -08 000000126 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:54:10.196 -08 000000126 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:54:10.196 -08 000000126 INF: ===================Camera #2 Frame #272===================
17-02-28 20:54:10.196 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:54:10.200 -08 000000126 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:54:10.200 -08 000000126 INF: ===================CameraTDI Cleanup===================
17-02-28 20:54:10.214 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:10.214 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:54:10.214 -08 000000018 INF: Valve A1: Go to position 1
17-02-28 20:54:10.214 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:54:10.215 -08 000000120 INF: Y Motor: Unshifted Position: 1023683
17-02-28 20:54:10.227 -08 000000067 INF: ======================================
17-02-28 20:54:10.265 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:10.276 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:54:10.276 -08 000000018 INF: Valve A1: 18.688 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:54:10.276 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 8 to 1
17-02-28 20:54:10.276 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW1\r
17-02-28 20:54:10.276 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:54:10.276 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:54:10.369 -08 000000126 INF: Camera #2 ReleaseBuffer
17-02-28 20:54:10.369 -08 000000126 INF: ===================Camera TDI===================
17-02-28 20:54:10.399 -08 000000093 INF: FPGA: Recv EX1MV
17-02-28 20:54:10.399 -08 000000093 INF: FPGA: Recv EX2MV
17-02-28 20:54:10.399 -08 000000036 INF: Excitation Filter 2: Moved 107 steps in 368.8657 ms
17-02-28 20:54:10.399 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 369.0573 ms
17-02-28 20:54:10.399 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.1565 ms
17-02-28 20:54:10.399 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.2254 ms
17-02-28 20:54:10.399 -08 000000036 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.0086 ms
17-02-28 20:54:10.399 -08 000000036 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.3865 ms
17-02-28 20:54:10.399 -08 000000032 INF: ======================================
17-02-28 20:54:10.400 -08 000000036 INF: ======================================
17-02-28 20:54:10.401 -08 000000120 INF: Y Motor: Unshifted Position: 991165
17-02-28 20:54:10.401 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:54:10.401 -08 000000120 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:54:10.401 -08 000000120 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:10.402 -08 000000031 INF: ======================================
17-02-28 20:54:10.403 -08 000000126 INF: ======================================
17-02-28 20:54:10.405 -08 000000056 INF: ===================Camera TDI===================
17-02-28 20:54:10.406 -08 000000056 INF: ======================================
17-02-28 20:54:10.466 -08 000000120 INF: Y Motor: Recv v 0\r
17-02-28 20:54:10.466 -08 000000120 INF: Y Motor: Moved to 14.9117 after 7864 ms
17-02-28 20:54:10.466 -08 000000120 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:54:10.528 -08 000000120 INF: Y Motor: Recv v 4097\r
17-02-28 20:54:10.528 -08 000000120 INF: Y Motor: Status After move finished OK:
17-02-28 20:54:10.528 -08 000000120 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:10.590 -08 000000120 INF: Y Motor: Recv v 0\r
17-02-28 20:54:10.590 -08 000000120 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:10.590 -08 000000120 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:54:10.652 -08 000000120 INF: Y Motor: Recv v 134217728\r
17-02-28 20:54:10.652 -08 000000120 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:54:10.652 -08 000000120 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:54:10.652 -08 000000120 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:54:10.713 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 1\r
17-02-28 20:54:10.713 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:10.713 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:54:10.714 -08 000000120 INF: Y Motor: Recv v 0\r
17-02-28 20:54:10.714 -08 000000120 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:54:10.714 -08 000000120 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:54:10.714 -08 000000120 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:10.776 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:54:10.776 -08 000000120 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:54:10.776 -08 000000120 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:10.839 -08 000000120 INF: Y Motor: Recv ok\r
17-02-28 20:54:10.839 -08 000000120 INF: ======================================
17-02-28 20:54:10.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:10.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:10.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:10.842 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:54:10.899 -08 000000009 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:54:10.899 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:54:10.963 -08 000000070 INF: FPGA: Recv TDIYERD 1491166
17-02-28 20:54:10.963 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:54:11.025 -08 000000056 INF: FPGA: Recv ZADCR 35404
17-02-28 20:54:11.025 -08 000000042 INF: At scan end Y pos = 14.912 and Z pos = -0.135. Y moved -48.539 mm
17-02-28 20:54:11.025 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:54:11.087 -08 000000126 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:54:11.087 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:54:11.087 -08 000000042 INF: TDIScan finished after 12655.5193 ms
17-02-28 20:54:11.087 -08 000000042 INF: Image[0]: Y should trigger at 63.451 mm, 2nd row was at 64.360 mm (error = 0.909 mm)
17-02-28 20:54:11.087 -08 000000042 INF: Image[2]: Y should trigger at 63.451 mm, 2nd row was at 64.360 mm (error = 0.909 mm)
17-02-28 20:54:11.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.123 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.608 um
17-02-28 20:54:11.124 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.125 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:54:11.151 -08 000000120 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:54:11.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.153 -08 000000037 INF: ===================Dither Clean Up Command===================
17-02-28 20:54:11.153 -08 000000061 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:54:11.153 -08 000000093 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:54:11.153 -08 000000061 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:54:11.153 -08 000000061 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:54:11.153 -08 000000111 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:54:11.153 -08 000000093 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:54:11.153 -08 000000093 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:54:11.154 -08 000000111 INF: ======================================
17-02-28 20:54:11.154 -08 000000063 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:54:11.154 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:54:11.155 -08 000000063 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:54:11.157 -08 000000059 INF: ===================LFT:Extracting coords===================
17-02-28 20:54:11.183 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:54:11.183 -08 000000059 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:54:11.184 -08 000000070 INF: ===================LookupFocusTracking===================
17-02-28 20:54:11.184 -08 000000126 INF: ===================LookupFocusTracking===================
17-02-28 20:54:11.184 -08 000000129 INF: ===================LookupFocusTracking===================
17-02-28 20:54:11.184 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:54:11.184 -08 000000070 INF: ===================Lookup Focus Tracking===================
17-02-28 20:54:11.184 -08 000000126 INF: ===================Lookup Focus Tracking===================
17-02-28 20:54:11.185 -08 000000129 INF: ===================Lookup Focus Tracking===================
17-02-28 20:54:11.185 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:54:11.211 -08 000000084 INF: FPGA: Recv ZSTEP 
17-02-28 20:54:11.211 -08 000000084 INF: FPGA: Recv ZSEL 
17-02-28 20:54:11.211 -08 000000063 INF: FPGA: Xmit ZDACW 40546\n
17-02-28 20:54:11.211 -08 000000093 INF: ======================================
17-02-28 20:54:11.213 -08 000000061 INF: Y Motor: Recv ok\r
17-02-28 20:54:11.213 -08 000000061 INF: ======================================
17-02-28 20:54:11.259 -08 000000070 INF: FC:B, C:5,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:54:11.259 -08 000000126 INF: FC:B, C:5,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:54:11.259 -08 000000032 INF: FC:B, C:5,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:54:11.259 -08 000000129 INF: FC:B, C:5,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:54:11.271 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:11.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:11.273 -08 000000027 INF: FPGA: Recv ZDACW 
17-02-28 20:54:11.274 -08 000000063 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:54:11.274 -08 000000063 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:54:11.314 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:11.335 -08 000000077 INF: FPGA: Recv TDIBB
17-02-28 20:54:11.335 -08 000000063 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:54:11.336 -08 000000063 INF: ======================================
17-02-28 20:54:11.401 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:11.409 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:54:11.410 -08 000000070 INF: LFT found best fwhm score 2.00006 in 151 ms
17-02-28 20:54:11.410 -08 000000126 INF: LFT found best fwhm score 2.00037 in 151 ms
17-02-28 20:54:11.410 -08 000000070 INF: LFT found good score at index 3073 with fwhm value 2.00006. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:4,T
17-02-28 20:54:11.410 -08 000000126 INF: LFT found good score at index 7677 with fwhm value 2.00037. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:4,T
17-02-28 20:54:11.410 -08 000000129 INF: LFT found best fwhm score 2.000023 in 151 ms
17-02-28 20:54:11.410 -08 000000129 INF: LFT found good score at index 493 with fwhm value 2.000023. Next cycle, cycle 6 starting Z position for top surface is at -0.158 mm FC:B, C:5,L:4,T
17-02-28 20:54:11.410 -08 000000032 INF: LFT found best fwhm score 2.203115 in 151 ms
17-02-28 20:54:11.410 -08 000000032 INF: LFT found good score at index 4321 with fwhm value 2.203115. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:4,T
17-02-28 20:54:11.410 -08 000000070 INF: ===================LookupFocusTracking===================
17-02-28 20:54:11.410 -08 000000129 INF: ===================LookupFocusTracking===================
17-02-28 20:54:11.410 -08 000000126 INF: ===================LookupFocusTracking===================
17-02-28 20:54:11.410 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:54:11.411 -08 000000070 INF: ======================================
17-02-28 20:54:11.411 -08 000000126 INF: ======================================
17-02-28 20:54:11.411 -08 000000032 INF: ======================================
17-02-28 20:54:11.411 -08 000000129 INF: ======================================
17-02-28 20:54:11.412 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:54:11.413 -08 000000059 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:5,L:4,T
17-02-28 20:54:11.413 -08 000000059 INF: ======================================
17-02-28 20:54:11.414 -08 000000037 INF: ======================================
17-02-28 20:54:11.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:54:11.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:54:11.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:54:11.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:54:11.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:54:11.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:54:11.418 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis===================
17-02-28 20:54:11.418 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:11.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:54:11.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:54:11.442 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:54:11.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:54:11.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:54:11.442 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:11.443 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:54:11.443 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 4===================
17-02-28 20:54:11.443 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface===================
17-02-28 20:54:11.527 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1208 Request: {"Cycle":5,"Lane":4,"Tile":1208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF282","HCSMMF201","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.555 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:54:11.567 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.569 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.570 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:54:11.570 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:54:11.645 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:54:11.645 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:54:11.652 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1201 Request: {"Cycle":5,"Lane":4,"Tile":1201,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF199","HCSMMF256","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.655 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1203 Request: {"Cycle":5,"Lane":4,"Tile":1203,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF245","HCSMMF221","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.656 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1204 Request: {"Cycle":5,"Lane":4,"Tile":1204,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF233","HCSMMF265","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.658 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1202 Request: {"Cycle":5,"Lane":4,"Tile":1202,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF200","HCSMMF243","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.659 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1218 Request: {"Cycle":5,"Lane":4,"Tile":1218,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF210","HCSMMF270","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.661 -08 000000122 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1206 Request: {"Cycle":5,"Lane":4,"Tile":1206,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF259","HCSMMF286","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.662 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1216 Request: {"Cycle":5,"Lane":4,"Tile":1216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF277","HCSMMF230","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.663 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1214 Request: {"Cycle":5,"Lane":4,"Tile":1214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF188","HCSMMF263","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.665 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1210 Request: {"Cycle":5,"Lane":4,"Tile":1210,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF211","HCSMMF268","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.666 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1215 Request: {"Cycle":5,"Lane":4,"Tile":1215,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF244","HCSMMF202","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.667 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1207 Request: {"Cycle":5,"Lane":4,"Tile":1207,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF232","HCSMMF182","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.667 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1220 Request: {"Cycle":5,"Lane":4,"Tile":1220,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF246","HCSMMF227","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.673 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1222 Request: {"Cycle":5,"Lane":4,"Tile":1222,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF207","HCSMMF249","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.675 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1219 Request: {"Cycle":5,"Lane":4,"Tile":1219,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF238","HCSMMF197","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.676 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1209 Request: {"Cycle":5,"Lane":4,"Tile":1209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF195","HCSMMF179","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.681 -08 000000120 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1212 Request: {"Cycle":5,"Lane":4,"Tile":1212,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF276","HCSMMF247","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.684 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1213 Request: {"Cycle":5,"Lane":4,"Tile":1213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF214","HCSMMF196","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.688 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1211 Request: {"Cycle":5,"Lane":4,"Tile":1211,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF235","HCSMMF193","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.689 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1221 Request: {"Cycle":5,"Lane":4,"Tile":1221,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF280","HCSMMF242","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.693 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1205 Request: {"Cycle":5,"Lane":4,"Tile":1205,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF209","HCSMMF212","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.697 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1224 Request: {"Cycle":5,"Lane":4,"Tile":1224,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF266","HCSMMF237","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.698 -08 000000107 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1226 Request: {"Cycle":5,"Lane":4,"Tile":1226,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF219","HCSMMF255","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.700 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1227 Request: {"Cycle":5,"Lane":4,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF283","HCSMMF284","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.703 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1225 Request: {"Cycle":5,"Lane":4,"Tile":1225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF264","HCSMMF258","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.705 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1217 Request: {"Cycle":5,"Lane":4,"Tile":1217,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF254","HCSMMF203","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.707 -08 000000119 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1223 Request: {"Cycle":5,"Lane":4,"Tile":1223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF225","HCSMMF287","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.711 -08 000000126 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 5 Tile: 1228 Request: {"Cycle":5,"Lane":4,"Tile":1228,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF222","HCSMMF229","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:11.712 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:54:11.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.712 -08 000000042 INF: TopSurfaceZPositions[] was -0.157964962148154, so used the TopSurfaceZPositions[] (-0.157964962148154) + compensator value (0.0227).
17-02-28 20:54:11.715 -08 000000042 INF: LFT enabled: Best z-height for LaneTopSurface and Illumina.Instrument.Logic.Sentrix.II.SentrixSection was found to be -0.135264962148154
17-02-28 20:54:11.715 -08 000000042 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:54:11.716 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.716 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.717 -08 000000084 INF: ===================Move Tilt Motor 2===================
17-02-28 20:54:11.717 -08 000000120 INF: ===================Move Tilt Motor 3===================
17-02-28 20:54:11.717 -08 000000123 INF: ===================Move Tilt Motor 1===================
17-02-28 20:54:11.717 -08 000000120 INF: ======================================
17-02-28 20:54:11.718 -08 000000084 INF: ======================================
17-02-28 20:54:11.718 -08 000000123 INF: ======================================
17-02-28 20:54:11.719 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.721 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.722 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.722 -08 000000042 INF: Compensator: Remaining IntoPath
17-02-28 20:54:11.722 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:11.843 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:54:11.844 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:11.846 -08 000000042 INF: Swath 1 position calculated to be: {X=79.69164, Y=39.76308} from estimated center X= 80.20699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:54:11.846 -08 000000042 INF: Swath 2 position calculated to be: {X=80.79964, Y=39.76308} from estimated center X= 80.20699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:54:11.850 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:54:11.851 -08 000000042 INF: Swath 0: Converted transform from (-39.18971, 20.9794) pixels to (-0.013455, 0.007245) mm.
17-02-28 20:54:11.857 -08 000000042 INF: Swath 1: Converted transform from (-48.47997, 18.15489) pixels to (-0.01656, 0.00621) mm.
17-02-28 20:54:11.858 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:54:11.859 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:54:11.859 -08 000000042 INF: Transformed XStagePosition from 79.69164 mm to 79.6781801320612 mm.
17-02-28 20:54:11.873 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5603343554549 mm.
17-02-28 20:54:11.874 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3603343554549 mm.
17-02-28 20:54:11.874 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4510843554549 mm.
17-02-28 20:54:11.876 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.876 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:54:11.876 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:11.876 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -154.7 um, section = E_1
17-02-28 20:54:11.877 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:54:11.878 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:54:11.879 -08 000000027 INF: ===================Move X,Y===================
17-02-28 20:54:11.879 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:54:11.879 -08 000000060 INF: ===================MoveEmissionFilters===================
17-02-28 20:54:11.879 -08 000000027 INF: ===================Move X,Y, Parallel===================
17-02-28 20:54:11.880 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:54:11.880 -08 000000035 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:54:11.880 -08 000000035 INF: Z Motor: Moving to -0.1553 mm, started at -0.1547 mm
17-02-28 20:54:11.880 -08 000000118 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:54:11.880 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:54:11.880 -08 000000035 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:54:11.880 -08 000000111 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:54:11.880 -08 000000107 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:54:11.880 -08 000000104 INF: ===================Move X Motor without settling===================
17-02-28 20:54:11.880 -08 000000036 INF: ===================Move Y Motor without settling===================
17-02-28 20:54:11.880 -08 000000104 INF: X Motor: Xmit PR VM\n
17-02-28 20:54:11.881 -08 000000118 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:54:11.881 -08 000000036 INF: Y Motor: Moving to 64.5603 mm @25.000 mm/sec, started at 14.9117 mm
17-02-28 20:54:11.881 -08 000000111 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:54:11.881 -08 000000107 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:54:11.881 -08 000000036 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:54:11.881 -08 000000036 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:11.881 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:54:11.881 -08 000000065 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:54:11.881 -08 000000094 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:54:11.882 -08 000000064 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:54:11.882 -08 000000056 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:54:11.882 -08 000000094 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:54:11.882 -08 000000119 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:54:11.882 -08 000000126 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:54:11.882 -08 000000097 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:54:11.882 -08 000000124 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:54:11.882 -08 000000094 INF: ======================================
17-02-28 20:54:11.882 -08 000000126 INF: ======================================
17-02-28 20:54:11.883 -08 000000097 INF: ======================================
17-02-28 20:54:11.883 -08 000000065 INF: ======================================
17-02-28 20:54:11.883 -08 000000124 INF: ======================================
17-02-28 20:54:11.883 -08 000000064 INF: ======================================
17-02-28 20:54:11.883 -08 000000056 INF: ======================================
17-02-28 20:54:11.884 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:54:11.884 -08 000000118 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:54:11.884 -08 000000111 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:54:11.885 -08 000000119 INF: ======================================
17-02-28 20:54:11.885 -08 000000032 INF: ======================================
17-02-28 20:54:11.885 -08 000000118 INF: ======================================
17-02-28 20:54:11.885 -08 000000111 INF: ======================================
17-02-28 20:54:11.886 -08 000000107 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:54:11.887 -08 000000107 INF: ======================================
17-02-28 20:54:11.888 -08 000000060 INF: ======================================
17-02-28 20:54:11.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:11.901 -08 000000120 INF: FPGA: Recv ZTRG 
17-02-28 20:54:11.901 -08 000000035 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:54:11.937 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:11.937 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:54:11.960 -08 000000055 INF: FPGA: Recv ZYT 
17-02-28 20:54:11.960 -08 000000035 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:54:11.960 -08 000000035 INF: FPGA: Xmit ZMV 40701\n
17-02-28 20:54:11.961 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:54:11.961 -08 000000036 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:54:11.961 -08 000000036 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:11.961 -08 000000104 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:54:11.961 -08 000000104 INF: X Motor: Xmit PR VI\n
17-02-28 20:54:11.987 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:11.993 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:54:12.000 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:12.021 -08 000000080 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:54:12.021 -08 000000080 INF: FPGA: Recv ZMV 
17-02-28 20:54:12.021 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:54:12.021 -08 000000035 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.1201 ms
17-02-28 20:54:12.021 -08 000000035 INF: FPGA: Xmit ZDACR\n
17-02-28 20:54:12.023 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:54:12.023 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:12.024 -08 000000104 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:54:12.024 -08 000000104 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:54:12.024 -08 000000104 INF: X Motor: Moving to 79.6782 mm @15.000 mm/sec, started at 78.0137 mm
17-02-28 20:54:12.024 -08 000000104 INF: X Motor: Xmit MA 8470\n
17-02-28 20:54:12.080 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:12.086 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:54:12.087 -08 000000107 INF: FPGA: Recv ZDACR 40701
17-02-28 20:54:12.087 -08 000000035 INF: Z Motor: MoveAndTrigger took 207.3304 ms w/comms
17-02-28 20:54:12.087 -08 000000035 INF: Z Motor: After move to -0.1553, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:54:12.087 -08 000000035 INF: Z Motor: MoveAbsStepped took 207.5247 ms
17-02-28 20:54:12.088 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:12.088 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:54:12.089 -08 000000104 INF: X Motor: Recv MA 8470\r\n>
17-02-28 20:54:12.089 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:54:12.089 -08 000000036 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:12.089 -08 000000104 INF: X Motor: WaitUntilStopped 60111
17-02-28 20:54:12.089 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:54:12.089 -08 000000036 INF: Y Motor: Set target position to 5956033 encoder counts
17-02-28 20:54:12.089 -08 000000036 INF: Y Motor: Xmit s r0xca 5956033\r
17-02-28 20:54:12.090 -08 000000031 INF: ===================TDI Scan Setup===================
17-02-28 20:54:12.090 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:54:12.090 -08 000000031 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:12.091 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:54:12.091 -08 000000031 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:54:12.091 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:54:12.092 -08 000000031 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:54:12.092 -08 000000031 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:54:12.146 -08 000000093 INF: FPGA: Recv ZSEL 
17-02-28 20:54:12.147 -08 000000031 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:54:12.147 -08 000000031 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:54:12.148 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:54:12.148 -08 000000036 INF: Y Motor: Start the move command
17-02-28 20:54:12.148 -08 000000036 INF: Y Motor: Xmit t 1\r
17-02-28 20:54:12.162 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:12.168 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:54:12.211 -08 000000038 INF: FPGA: Recv TDIBB
17-02-28 20:54:12.211 -08 000000031 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:54:12.213 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:54:12.213 -08 000000031 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:54:12.213 -08 000000036 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:54:12.213 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:12.213 -08 000000031 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:12.215 -08 000000031 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:54:12.215 -08 000000031 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:54:12.215 -08 000000031 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:54:12.264 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:12.273 -08 000000029 INF: FPGA: Recv ZSTEP 
17-02-28 20:54:12.273 -08 000000031 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:12.275 -08 000000031 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:54:12.275 -08 000000031 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:12.277 -08 000000031 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:54:12.277 -08 000000031 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:54:12.277 -08 000000031 INF: Z Motor: Arming to move to -0.1153 mm
17-02-28 20:54:12.277 -08 000000031 INF: FPGA: Xmit ZYT 6436033 4\n
17-02-28 20:54:12.337 -08 000000036 INF: Y Motor: Unshifted Position: 1076544
17-02-28 20:54:12.337 -08 000000087 INF: FPGA: Recv ZYT 
17-02-28 20:54:12.338 -08 000000031 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1576544 enc / 15.765 mm / ) = 6436033 enc / 64.360 mm
17-02-28 20:54:12.338 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:12.338 -08 000000031 INF: FPGA: Xmit ZARM 30216\n
17-02-28 20:54:12.387 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:12.397 -08 000000097 INF: FPGA: Recv ZARM
17-02-28 20:54:12.397 -08 000000031 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.4626 ms
17-02-28 20:54:12.397 -08 000000031 INF: Z Motor: ArmAbsStepped took 119.917 ms
17-02-28 20:54:12.398 -08 000000031 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:12.398 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:12.399 -08 000000031 INF: ===================TDI Scan Setup===================
17-02-28 20:54:12.400 -08 000000031 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:54:12.401 -08 000000031 INF: ===================TDI Scan Setup===================
17-02-28 20:54:12.402 -08 000000031 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:54:12.403 -08 000000031 INF: ===================TDI Scan Setup===================
17-02-28 20:54:12.404 -08 000000031 INF: ======================================
17-02-28 20:54:12.498 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:54:12.511 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:12.542 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:54:12.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:12.647 -08 000000036 INF: Y Motor: Unshifted Position: 1781174
17-02-28 20:54:12.685 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:12.697 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:12.713 -08 000000104 INF: X Motor: Xmit PR ER\n
17-02-28 20:54:12.713 -08 000000084 INF: Camera #0 AttachBuffer (imageDataPtr = 56923197488 imgPtr = 56923197488 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:54:12.714 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:54:12.714 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:54:12.730 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:54:12.732 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:54:12.778 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:12.778 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:54:12.779 -08 000000104 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:54:12.780 -08 000000104 INF: X Motor: Moved to 79.6787 after 691 ms
17-02-28 20:54:12.780 -08 000000104 INF: ======================================
17-02-28 20:54:12.829 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:12.878 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP9600R\r
17-02-28 20:54:12.958 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:12.960 -08 000000036 INF: Y Motor: Unshifted Position: 2563685
17-02-28 20:54:13.010 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:13.058 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:13.083 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:13.134 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:13.272 -08 000000036 INF: Y Motor: Unshifted Position: 3343625
17-02-28 20:54:13.322 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:13.333 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:13.362 -08 000000084 INF: Camera #2 AttachBuffer (imageDataPtr = 58735136816 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:54:13.362 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:54:13.362 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:54:13.377 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:54:13.379 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:54:13.380 -08 000000084 INF: ======================================
17-02-28 20:54:13.381 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:54:13.382 -08 000000035 INF: ======================================
17-02-28 20:54:13.395 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:13.446 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:13.583 -08 000000036 INF: Y Motor: Unshifted Position: 4124533
17-02-28 20:54:13.633 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:13.645 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:13.708 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:13.758 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:13.897 -08 000000036 INF: Y Motor: Unshifted Position: 4906980
17-02-28 20:54:13.947 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:13.958 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:14.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:14.072 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:14.209 -08 000000036 INF: Y Motor: Unshifted Position: 5683704
17-02-28 20:54:14.259 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:14.271 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:14.331 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:14.384 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:14.521 -08 000000036 INF: Y Motor: Unshifted Position: 5956034
17-02-28 20:54:14.521 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:54:14.521 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:14.581 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:14.583 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:54:14.583 -08 000000036 INF: Y Motor: Moved to 64.5603 after 2370 ms
17-02-28 20:54:14.583 -08 000000036 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:54:14.643 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:14.644 -08 000000036 INF: Y Motor: Recv v 4096\r
17-02-28 20:54:14.644 -08 000000036 INF: Y Motor: Status After move finished OK:
17-02-28 20:54:14.644 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:14.709 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:54:14.709 -08 000000036 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:14.709 -08 000000036 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:54:14.769 -08 000000036 INF: Y Motor: Recv v 402653184\r
17-02-28 20:54:14.769 -08 000000036 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:54:14.769 -08 000000036 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:54:14.769 -08 000000036 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:54:14.831 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:54:14.831 -08 000000036 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:54:14.831 -08 000000036 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:54:14.831 -08 000000036 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:14.893 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:14.896 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:54:14.896 -08 000000036 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:54:14.896 -08 000000036 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:14.957 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:14.958 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:54:14.958 -08 000000036 INF: ======================================
17-02-28 20:54:14.960 -08 000000027 INF: ===================Move X,Y===================
17-02-28 20:54:14.961 -08 000000027 INF: ======================================
17-02-28 20:54:14.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:54:14.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:14.963 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:54:14.963 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:54:15.021 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:54:15.021 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:54:15.089 -08 000000064 INF: FPGA: Recv ZFREQCL
17-02-28 20:54:15.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:54:15.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:15.090 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:54:15.142 -08 000000096 INF: FPGA: Recv TDIYERD 6456034
17-02-28 20:54:15.142 -08 000000042 INF: Before scan, Y encoder from FPGA = 6456034 counts (64.560 mm)
17-02-28 20:54:15.142 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:15.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:15.144 -08 000000119 INF: ===================TDI FPGA Arm===================
17-02-28 20:54:15.144 -08 000000060 INF: ===================Set YMotor gains for scans===================
17-02-28 20:54:15.144 -08 000000119 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:15.144 -08 000000060 INF: ======================================
17-02-28 20:54:15.145 -08 000000119 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:54:15.145 -08 000000119 INF: FPGA: Xmit TDIYPOS 6345108\n
17-02-28 20:54:15.205 -08 000000104 INF: FPGA: Recv TDIYPOS
17-02-28 20:54:15.205 -08 000000119 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:15.207 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:15.207 -08 000000119 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:54:15.207 -08 000000119 INF: FPGA: Xmit TDIYARM3 139264 6436033 1 1\n
17-02-28 20:54:15.267 -08 000000129 INF: FPGA: Recv TDIYARM3
17-02-28 20:54:15.267 -08 000000119 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:15.268 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:15.269 -08 000000119 INF: ===================TDI FPGA Arm===================
17-02-28 20:54:15.270 -08 000000119 INF: ======================================
17-02-28 20:54:15.271 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:15.271 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:15.272 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:15.272 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:15.273 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:15.273 -08 000000111 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:54:15.273 -08 000000097 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:54:15.273 -08 000000111 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:54:15.274 -08 000000111 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:54:15.274 -08 000000111 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:54:15.274 -08 000000097 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:54:15.274 -08 000000111 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:54:15.274 -08 000000097 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:54:15.274 -08 000000097 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:54:15.275 -08 000000097 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:54:15.518 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:15.583 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:15.641 -08 000000071 INF: FPGA: Recv EX2MV
17-02-28 20:54:15.641 -08 000000071 INF: FPGA: Recv EX1MV
17-02-28 20:54:15.641 -08 000000097 INF: Excitation Filter 1: Moved -107 steps in 367.1743 ms
17-02-28 20:54:15.641 -08 000000097 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.3283 ms
17-02-28 20:54:15.641 -08 000000097 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.4363 ms
17-02-28 20:54:15.641 -08 000000111 INF: Excitation Filter 2: Moved -107 steps in 367.4016 ms
17-02-28 20:54:15.641 -08 000000111 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.6867 ms
17-02-28 20:54:15.641 -08 000000111 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.7617 ms
17-02-28 20:54:15.641 -08 000000097 INF: ======================================
17-02-28 20:54:15.642 -08 000000111 INF: ======================================
17-02-28 20:54:15.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:15.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:15.645 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:54:15.645 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:54:15.645 -08 000000027 INF: ===================Move Y Motor without settling===================
17-02-28 20:54:15.645 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:54:15.645 -08 000000027 INF: Y Motor: Moving to 14.9120 mm @6.500 mm/sec, started at 64.5603 mm
17-02-28 20:54:15.645 -08 000000035 INF: ===================Camera TDI, Parallel===================
17-02-28 20:54:15.646 -08 000000027 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:54:15.646 -08 000000027 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:15.646 -08 000000123 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:54:15.646 -08 000000123 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:54:15.646 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:54:15.646 -08 000000118 INF: ===================Camera TDI===================
17-02-28 20:54:15.647 -08 000000123 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:54:15.648 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:15.648 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:15.649 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:15.649 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:15.709 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:54:15.709 -08 000000027 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:54:15.709 -08 000000027 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:15.772 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:54:15.772 -08 000000027 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:15.799 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:15.799 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:15.799 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:15.799 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:15.830 -08 000000027 INF: Y Motor: Recv v 0\r
17-02-28 20:54:15.830 -08 000000027 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:15.834 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:15.834 -08 000000027 INF: Y Motor: Set target position to 991200 encoder counts
17-02-28 20:54:15.834 -08 000000027 INF: Y Motor: Xmit s r0xca 991200\r
17-02-28 20:54:15.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:15.892 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:54:15.892 -08 000000027 INF: Y Motor: Start the move command
17-02-28 20:54:15.892 -08 000000027 INF: Y Motor: Xmit t 1\r
17-02-28 20:54:15.949 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:15.949 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:15.949 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:15.949 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:15.954 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:54:15.954 -08 000000027 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:54:15.954 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:16.017 -08 000000040 INF: FPGA: Recv ZWAIT 
17-02-28 20:54:16.017 -08 000000064 INF: ======================================
17-02-28 20:54:16.081 -08 000000027 INF: Y Motor: Unshifted Position: 5892233
17-02-28 20:54:16.099 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:54:16.099 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:54:16.099 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:54:16.099 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:54:16.099 -08 000000118 INF: ===================Camera #2 Frame #5===================
17-02-28 20:54:16.099 -08 000000084 INF: ===================Camera #0 Frame #5===================
17-02-28 20:54:16.131 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:16.142 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:16.206 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:16.257 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:16.264 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:54:16.264 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:54:16.264 -08 000000084 INF: ===================Camera #0 Frame #11===================
17-02-28 20:54:16.265 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:54:16.265 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:54:16.265 -08 000000118 INF: ===================Camera #2 Frame #11===================
17-02-28 20:54:16.392 -08 000000027 INF: Y Motor: Unshifted Position: 5689431
17-02-28 20:54:16.434 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:54:16.434 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:54:16.434 -08 000000118 INF: ===================Camera #2 Frame #17===================
17-02-28 20:54:16.439 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:54:16.439 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:54:16.439 -08 000000084 INF: ===================Camera #0 Frame #17===================
17-02-28 20:54:16.442 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:16.456 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:16.516 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:16.567 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:16.605 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:54:16.605 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:54:16.605 -08 000000118 INF: ===================Camera #2 Frame #23===================
17-02-28 20:54:16.613 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:54:16.613 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:54:16.613 -08 000000084 INF: ===================Camera #0 Frame #23===================
17-02-28 20:54:16.706 -08 000000027 INF: Y Motor: Unshifted Position: 5486424
17-02-28 20:54:16.756 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:16.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:16.783 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:54:16.783 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:54:16.783 -08 000000118 INF: ===================Camera #2 Frame #30===================
17-02-28 20:54:16.788 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:54:16.788 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:54:16.788 -08 000000084 INF: ===================Camera #0 Frame #30===================
17-02-28 20:54:16.830 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:16.881 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:16.963 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:54:16.963 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:54:16.963 -08 000000118 INF: ===================Camera #2 Frame #36===================
17-02-28 20:54:16.968 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:54:16.968 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:54:16.968 -08 000000084 INF: ===================Camera #0 Frame #37===================
17-02-28 20:54:17.017 -08 000000027 INF: Y Motor: Unshifted Position: 5284918
17-02-28 20:54:17.067 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:17.080 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:17.133 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:54:17.133 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:54:17.133 -08 000000118 INF: ===================Camera #2 Frame #43===================
17-02-28 20:54:17.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:17.148 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:54:17.148 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:54:17.148 -08 000000084 INF: ===================Camera #0 Frame #43===================
17-02-28 20:54:17.191 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:17.313 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:54:17.313 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:54:17.313 -08 000000118 INF: ===================Camera #2 Frame #49===================
17-02-28 20:54:17.316 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:54:17.316 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:54:17.316 -08 000000084 INF: ===================Camera #0 Frame #49===================
17-02-28 20:54:17.329 -08 000000027 INF: Y Motor: Unshifted Position: 5081245
17-02-28 20:54:17.379 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:17.390 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:17.453 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:17.483 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:54:17.483 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:54:17.483 -08 000000118 INF: ===================Camera #2 Frame #56===================
17-02-28 20:54:17.485 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:54:17.485 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:54:17.485 -08 000000084 INF: ===================Camera #0 Frame #56===================
17-02-28 20:54:17.504 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:17.642 -08 000000027 INF: Y Motor: Unshifted Position: 4877579
17-02-28 20:54:17.656 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:54:17.656 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:54:17.656 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:54:17.656 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:54:17.656 -08 000000084 INF: ===================Camera #0 Frame #62===================
17-02-28 20:54:17.656 -08 000000118 INF: ===================Camera #2 Frame #62===================
17-02-28 20:54:17.692 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:17.703 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:17.764 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:17.815 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:17.825 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:54:17.825 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:54:17.825 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:54:17.825 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:54:17.825 -08 000000084 INF: ===================Camera #0 Frame #68===================
17-02-28 20:54:17.825 -08 000000118 INF: ===================Camera #2 Frame #68===================
17-02-28 20:54:17.956 -08 000000027 INF: Y Motor: Unshifted Position: 4674133
17-02-28 20:54:17.994 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:54:17.994 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:54:17.994 -08 000000118 INF: ===================Camera #2 Frame #74===================
17-02-28 20:54:17.995 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:54:17.995 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:54:17.995 -08 000000084 INF: ===================Camera #0 Frame #74===================
17-02-28 20:54:18.006 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:18.014 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:18.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:18.130 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:18.163 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:54:18.163 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:54:18.163 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:54:18.163 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:54:18.163 -08 000000084 INF: ===================Camera #0 Frame #81===================
17-02-28 20:54:18.163 -08 000000118 INF: ===================Camera #2 Frame #81===================
17-02-28 20:54:18.266 -08 000000027 INF: Y Motor: Unshifted Position: 4471104
17-02-28 20:54:18.316 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:18.328 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:18.334 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:54:18.334 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:54:18.334 -08 000000084 INF: ===================Camera #0 Frame #87===================
17-02-28 20:54:18.335 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:54:18.335 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:54:18.335 -08 000000118 INF: ===================Camera #2 Frame #87===================
17-02-28 20:54:18.390 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:18.441 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:18.502 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:54:18.502 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:54:18.502 -08 000000084 INF: ===================Camera #0 Frame #93===================
17-02-28 20:54:18.504 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:54:18.504 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:54:18.504 -08 000000118 INF: ===================Camera #2 Frame #93===================
17-02-28 20:54:18.578 -08 000000027 INF: Y Motor: Unshifted Position: 4269603
17-02-28 20:54:18.628 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:18.640 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:18.670 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:54:18.670 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:54:18.670 -08 000000084 INF: ===================Camera #0 Frame #99===================
17-02-28 20:54:18.673 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:54:18.673 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:54:18.673 -08 000000118 INF: ===================Camera #2 Frame #99===================
17-02-28 20:54:18.700 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:18.751 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:18.839 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:54:18.839 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:54:18.839 -08 000000084 INF: ===================Camera #0 Frame #105===================
17-02-28 20:54:18.842 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:54:18.842 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:54:18.842 -08 000000118 INF: ===================Camera #2 Frame #106===================
17-02-28 20:54:18.890 -08 000000027 INF: Y Motor: Unshifted Position: 4065928
17-02-28 20:54:18.940 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:18.950 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:19.007 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:54:19.007 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:54:19.007 -08 000000084 INF: ===================Camera #0 Frame #112===================
17-02-28 20:54:19.014 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:19.014 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:54:19.014 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:54:19.014 -08 000000118 INF: ===================Camera #2 Frame #112===================
17-02-28 20:54:19.065 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:19.179 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:54:19.179 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:54:19.179 -08 000000084 INF: ===================Camera #0 Frame #118===================
17-02-28 20:54:19.183 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:54:19.183 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:54:19.183 -08 000000118 INF: ===================Camera #2 Frame #118===================
17-02-28 20:54:19.201 -08 000000027 INF: Y Motor: Unshifted Position: 3863784
17-02-28 20:54:19.251 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:19.264 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:19.324 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:19.347 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:54:19.347 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:54:19.347 -08 000000084 INF: ===================Camera #0 Frame #124===================
17-02-28 20:54:19.353 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:54:19.353 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:54:19.353 -08 000000118 INF: ===================Camera #2 Frame #124===================
17-02-28 20:54:19.375 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:19.513 -08 000000027 INF: Y Motor: Unshifted Position: 3660764
17-02-28 20:54:19.516 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:54:19.516 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:54:19.516 -08 000000084 INF: ===================Camera #0 Frame #130===================
17-02-28 20:54:19.522 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:54:19.522 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:54:19.522 -08 000000118 INF: ===================Camera #2 Frame #131===================
17-02-28 20:54:19.563 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:19.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:19.637 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:19.686 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:54:19.686 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:54:19.686 -08 000000084 INF: ===================Camera #0 Frame #137===================
17-02-28 20:54:19.689 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:19.694 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:54:19.694 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:54:19.694 -08 000000118 INF: ===================Camera #2 Frame #137===================
17-02-28 20:54:19.826 -08 000000027 INF: Y Motor: Unshifted Position: 3457317
17-02-28 20:54:19.858 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:54:19.858 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:54:19.858 -08 000000084 INF: ===================Camera #0 Frame #143===================
17-02-28 20:54:19.863 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:54:19.863 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:54:19.863 -08 000000118 INF: ===================Camera #2 Frame #143===================
17-02-28 20:54:19.876 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:19.887 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:19.948 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:19.999 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:20.027 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:54:20.027 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:54:20.027 -08 000000084 INF: ===================Camera #0 Frame #149===================
17-02-28 20:54:20.032 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:54:20.032 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:54:20.032 -08 000000118 INF: ===================Camera #2 Frame #149===================
17-02-28 20:54:20.136 -08 000000027 INF: Y Motor: Unshifted Position: 3254300
17-02-28 20:54:20.186 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:20.196 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:54:20.196 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:54:20.196 -08 000000084 INF: ===================Camera #0 Frame #155===================
17-02-28 20:54:20.198 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:20.201 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:54:20.201 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:54:20.201 -08 000000118 INF: ===================Camera #2 Frame #156===================
17-02-28 20:54:20.262 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:20.313 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:20.365 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:54:20.365 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:54:20.365 -08 000000084 INF: ===================Camera #0 Frame #162===================
17-02-28 20:54:20.374 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:54:20.374 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:54:20.374 -08 000000118 INF: ===================Camera #2 Frame #162===================
17-02-28 20:54:20.449 -08 000000027 INF: Y Motor: Unshifted Position: 3052156
17-02-28 20:54:20.499 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:20.512 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:20.536 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:54:20.536 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:54:20.536 -08 000000084 INF: ===================Camera #0 Frame #168===================
17-02-28 20:54:20.543 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:54:20.543 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:54:20.543 -08 000000118 INF: ===================Camera #2 Frame #168===================
17-02-28 20:54:20.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:20.625 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:20.704 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:54:20.704 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:54:20.704 -08 000000084 INF: ===================Camera #0 Frame #174===================
17-02-28 20:54:20.712 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:54:20.712 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:54:20.712 -08 000000118 INF: ===================Camera #2 Frame #174===================
17-02-28 20:54:20.764 -08 000000027 INF: Y Motor: Unshifted Position: 2849143
17-02-28 20:54:20.814 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:20.824 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:20.874 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:54:20.874 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:54:20.874 -08 000000084 INF: ===================Camera #0 Frame #180===================
17-02-28 20:54:20.884 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:54:20.884 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:54:20.884 -08 000000118 INF: ===================Camera #2 Frame #181===================
17-02-28 20:54:20.885 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:20.937 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:21.043 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:54:21.043 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:54:21.043 -08 000000084 INF: ===================Camera #0 Frame #187===================
17-02-28 20:54:21.057 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:54:21.057 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:54:21.057 -08 000000118 INF: ===================Camera #2 Frame #187===================
17-02-28 20:54:21.073 -08 000000027 INF: Y Motor: Unshifted Position: 2646990
17-02-28 20:54:21.123 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:21.135 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:21.198 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:21.217 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:54:21.217 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:54:21.217 -08 000000084 INF: ===================Camera #0 Frame #193===================
17-02-28 20:54:21.227 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:54:21.227 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:54:21.227 -08 000000118 INF: ===================Camera #2 Frame #193===================
17-02-28 20:54:21.250 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:21.388 -08 000000027 INF: Y Motor: Unshifted Position: 2442680
17-02-28 20:54:21.388 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:54:21.388 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:54:21.388 -08 000000084 INF: ===================Camera #0 Frame #199===================
17-02-28 20:54:21.398 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:54:21.398 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:54:21.398 -08 000000118 INF: ===================Camera #2 Frame #200===================
17-02-28 20:54:21.438 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:21.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:21.510 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:21.558 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:54:21.558 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:54:21.558 -08 000000084 INF: ===================Camera #0 Frame #206===================
17-02-28 20:54:21.561 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:21.572 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:54:21.572 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:54:21.572 -08 000000118 INF: ===================Camera #2 Frame #206===================
17-02-28 20:54:21.697 -08 000000027 INF: Y Motor: Unshifted Position: 2240532
17-02-28 20:54:21.732 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:54:21.732 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:54:21.732 -08 000000084 INF: ===================Camera #0 Frame #212===================
17-02-28 20:54:21.742 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:54:21.742 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:54:21.742 -08 000000118 INF: ===================Camera #2 Frame #212===================
17-02-28 20:54:21.747 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:21.760 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:21.821 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:21.872 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:21.901 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:54:21.901 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:54:21.901 -08 000000084 INF: ===================Camera #0 Frame #218===================
17-02-28 20:54:21.912 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:54:21.912 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:54:21.912 -08 000000118 INF: ===================Camera #2 Frame #219===================
17-02-28 20:54:22.009 -08 000000027 INF: Y Motor: Unshifted Position: 2036864
17-02-28 20:54:22.059 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:22.070 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:54:22.070 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:54:22.070 -08 000000084 INF: ===================Camera #0 Frame #224===================
17-02-28 20:54:22.071 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:22.085 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:54:22.085 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:54:22.085 -08 000000118 INF: ===================Camera #2 Frame #225===================
17-02-28 20:54:22.134 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:22.185 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:22.240 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:54:22.240 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:54:22.240 -08 000000084 INF: ===================Camera #0 Frame #231===================
17-02-28 20:54:22.256 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:54:22.256 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:54:22.256 -08 000000118 INF: ===================Camera #2 Frame #231===================
17-02-28 20:54:22.322 -08 000000027 INF: Y Motor: Unshifted Position: 1835367
17-02-28 20:54:22.372 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:22.384 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:22.412 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:54:22.412 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:54:22.412 -08 000000084 INF: ===================Camera #0 Frame #237===================
17-02-28 20:54:22.426 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:54:22.426 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:54:22.426 -08 000000118 INF: ===================Camera #2 Frame #238===================
17-02-28 20:54:22.445 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:22.498 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:22.582 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:54:22.582 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:54:22.582 -08 000000084 INF: ===================Camera #0 Frame #243===================
17-02-28 20:54:22.600 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:54:22.600 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:54:22.600 -08 000000118 INF: ===================Camera #2 Frame #244===================
17-02-28 20:54:22.632 -08 000000027 INF: Y Motor: Unshifted Position: 1632343
17-02-28 20:54:22.682 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:22.695 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:22.751 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:54:22.751 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:54:22.751 -08 000000084 INF: ===================Camera #0 Frame #249===================
17-02-28 20:54:22.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:22.770 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:54:22.770 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:54:22.770 -08 000000118 INF: ===================Camera #2 Frame #250===================
17-02-28 20:54:22.808 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:22.921 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:54:22.921 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:54:22.921 -08 000000084 INF: ===================Camera #0 Frame #256===================
17-02-28 20:54:22.941 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:54:22.941 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:54:22.941 -08 000000118 INF: ===================Camera #2 Frame #256===================
17-02-28 20:54:22.946 -08 000000027 INF: Y Motor: Unshifted Position: 1428891
17-02-28 20:54:22.996 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:23.009 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:23.069 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:23.094 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:54:23.094 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:54:23.094 -08 000000084 INF: ===================Camera #0 Frame #262===================
17-02-28 20:54:23.111 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:54:23.111 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:54:23.111 -08 000000118 INF: ===================Camera #2 Frame #263===================
17-02-28 20:54:23.120 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:23.258 -08 000000027 INF: Y Motor: Unshifted Position: 1225863
17-02-28 20:54:23.263 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:54:23.263 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:54:23.263 -08 000000084 INF: ===================Camera #0 Frame #268===================
17-02-28 20:54:23.285 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:54:23.285 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:54:23.285 -08 000000118 INF: ===================Camera #2 Frame #269===================
17-02-28 20:54:23.308 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:23.319 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:23.382 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:23.382 -08 000000061 INF: FPGA: Recv TDIYWAIT
17-02-28 20:54:23.382 -08 000000123 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:54:23.384 -08 000000123 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:54:23.384 -08 000000056 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:54:23.385 -08 000000052 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:54:23.385 -08 000000056 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:54:23.385 -08 000000056 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:54:23.385 -08 000000056 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:54:23.385 -08 000000052 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:54:23.385 -08 000000056 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:54:23.385 -08 000000052 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:54:23.385 -08 000000052 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:54:23.386 -08 000000052 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:54:23.432 -08 000000084 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:54:23.432 -08 000000084 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:54:23.432 -08 000000084 INF: ===================Camera #0 Frame #272===================
17-02-28 20:54:23.433 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:23.445 -08 000000084 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:54:23.446 -08 000000084 INF: ===================CameraTDI Cleanup===================
17-02-28 20:54:23.570 -08 000000027 INF: Y Motor: Unshifted Position: 1022422
17-02-28 20:54:23.609 -08 000000084 INF: Camera #0 ReleaseBuffer
17-02-28 20:54:23.609 -08 000000118 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:54:23.609 -08 000000118 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:54:23.609 -08 000000118 INF: ===================Camera #2 Frame #272===================
17-02-28 20:54:23.609 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:54:23.618 -08 000000118 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:54:23.619 -08 000000118 INF: ===================CameraTDI Cleanup===================
17-02-28 20:54:23.620 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:23.632 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:23.641 -08 000000084 INF: ======================================
17-02-28 20:54:23.692 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:23.753 -08 000000107 INF: FPGA: Recv EX1MV
17-02-28 20:54:23.753 -08 000000107 INF: FPGA: Recv EX2MV
17-02-28 20:54:23.753 -08 000000052 INF: Excitation Filter 2: Moved 107 steps in 367.9651 ms
17-02-28 20:54:23.753 -08 000000052 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.1373 ms
17-02-28 20:54:23.753 -08 000000052 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.2148 ms
17-02-28 20:54:23.753 -08 000000056 INF: Excitation Filter 1: Moved 107 steps in 368.2172 ms
17-02-28 20:54:23.753 -08 000000056 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 368.4281 ms
17-02-28 20:54:23.753 -08 000000056 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 368.5327 ms
17-02-28 20:54:23.753 -08 000000052 INF: ======================================
17-02-28 20:54:23.753 -08 000000056 INF: ======================================
17-02-28 20:54:23.755 -08 000000027 INF: Y Motor: Unshifted Position: 991200
17-02-28 20:54:23.755 -08 000000027 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:54:23.755 -08 000000027 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:23.755 -08 000000123 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:54:23.756 -08 000000123 INF: ======================================
17-02-28 20:54:23.817 -08 000000118 INF: Camera #2 ReleaseBuffer
17-02-28 20:54:23.817 -08 000000118 INF: ===================Camera TDI===================
17-02-28 20:54:23.819 -08 000000027 INF: Y Motor: Recv v 0\r
17-02-28 20:54:23.819 -08 000000027 INF: Y Motor: Moved to 14.9120 after 7864 ms
17-02-28 20:54:23.819 -08 000000027 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:54:23.851 -08 000000118 INF: ======================================
17-02-28 20:54:23.853 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:54:23.854 -08 000000035 INF: ======================================
17-02-28 20:54:23.881 -08 000000027 INF: Y Motor: Recv v 4097\r
17-02-28 20:54:23.881 -08 000000027 INF: Y Motor: Status After move finished OK:
17-02-28 20:54:23.881 -08 000000027 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:23.942 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:23.944 -08 000000027 INF: Y Motor: Recv v 0\r
17-02-28 20:54:23.944 -08 000000027 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:23.944 -08 000000027 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:54:24.005 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:24.006 -08 000000027 INF: Y Motor: Recv v 134217728\r
17-02-28 20:54:24.006 -08 000000027 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:54:24.006 -08 000000027 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:54:24.006 -08 000000027 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:54:24.069 -08 000000027 INF: Y Motor: Recv v 0\r
17-02-28 20:54:24.069 -08 000000027 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:54:24.069 -08 000000027 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:54:24.069 -08 000000027 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:24.132 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:54:24.132 -08 000000027 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:54:24.132 -08 000000027 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:24.194 -08 000000027 INF: Y Motor: Recv ok\r
17-02-28 20:54:24.194 -08 000000027 INF: ======================================
17-02-28 20:54:24.195 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:24.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:24.197 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.197 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:54:24.253 -08 000000072 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:54:24.253 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:54:24.255 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:24.315 -08 000000029 INF: FPGA: Recv TDIYERD 1491201
17-02-28 20:54:24.315 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:54:24.316 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:24.380 -08 000000123 INF: FPGA: Recv ZADCR 35718
17-02-28 20:54:24.380 -08 000000042 INF: At scan end Y pos = 14.912 and Z pos = -0.137. Y moved -48.539 mm
17-02-28 20:54:24.380 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:54:24.441 -08 000000104 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:54:24.441 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:54:24.441 -08 000000042 INF: TDIScan finished after 12581.6972 ms
17-02-28 20:54:24.441 -08 000000042 INF: Image[0]: Y should trigger at 63.451 mm, 2nd row was at 64.360 mm (error = 0.909 mm)
17-02-28 20:54:24.441 -08 000000042 INF: Image[2]: Y should trigger at 63.451 mm, 2nd row was at 64.360 mm (error = 0.909 mm)
17-02-28 20:54:24.443 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.476 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.616 um
17-02-28 20:54:24.476 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.477 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:54:24.504 -08 000000123 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:54:24.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.505 -08 000000097 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:54:24.505 -08 000000040 INF: ===================Dither Clean Up Command===================
17-02-28 20:54:24.505 -08 000000092 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:54:24.506 -08 000000092 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:54:24.506 -08 000000097 INF: ======================================
17-02-28 20:54:24.506 -08 000000038 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:54:24.506 -08 000000092 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:54:24.506 -08 000000038 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:54:24.506 -08 000000038 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:54:24.507 -08 000000097 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:54:24.507 -08 000000061 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:54:24.507 -08 000000097 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:54:24.511 -08 000000061 INF: ===================LFT:Extracting coords===================
17-02-28 20:54:24.536 -08 000000061 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:54:24.537 -08 000000061 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:54:24.538 -08 000000029 INF: ===================LookupFocusTracking===================
17-02-28 20:54:24.538 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:54:24.538 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:54:24.538 -08 000000088 INF: ===================LookupFocusTracking===================
17-02-28 20:54:24.538 -08 000000029 INF: ===================Lookup Focus Tracking===================
17-02-28 20:54:24.538 -08 000000104 INF: ===================Lookup Focus Tracking===================
17-02-28 20:54:24.538 -08 000000051 INF: ===================Lookup Focus Tracking===================
17-02-28 20:54:24.538 -08 000000088 INF: ===================Lookup Focus Tracking===================
17-02-28 20:54:24.566 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:24.567 -08 000000084 INF: FPGA: Recv ZSTEP 
17-02-28 20:54:24.567 -08 000000084 INF: FPGA: Recv ZSEL 
17-02-28 20:54:24.567 -08 000000097 INF: FPGA: Xmit ZDACW 40701\n
17-02-28 20:54:24.567 -08 000000092 INF: ======================================
17-02-28 20:54:24.570 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:54:24.570 -08 000000038 INF: ======================================
17-02-28 20:54:24.612 -08 000000029 INF: FC:B, C:5,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:54:24.612 -08 000000104 INF: FC:B, C:5,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:54:24.612 -08 000000051 INF: FC:B, C:5,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:54:24.621 -08 000000088 INF: FC:B, C:5,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:54:24.630 -08 000000062 INF: FPGA: Recv ZDACW 
17-02-28 20:54:24.631 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:24.631 -08 000000097 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:54:24.631 -08 000000097 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:54:24.690 -08 000000129 INF: FPGA: Recv TDIBB
17-02-28 20:54:24.690 -08 000000097 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:54:24.691 -08 000000097 INF: ======================================
17-02-28 20:54:24.763 -08 000000029 INF: LFT found best fwhm score 2.000069 in 151 ms
17-02-28 20:54:24.763 -08 000000029 INF: LFT found good score at index 493 with fwhm value 2.000069. Next cycle, cycle 6 starting Z position for top surface is at -0.158 mm FC:B, C:5,L:5,T
17-02-28 20:54:24.763 -08 000000104 INF: LFT found best fwhm score 2.000628 in 151 ms
17-02-28 20:54:24.764 -08 000000104 INF: LFT found good score at index 5093 with fwhm value 2.000628. Next cycle, cycle 6 starting Z position for top surface is at -0.158 mm FC:B, C:5,L:5,T
17-02-28 20:54:24.764 -08 000000051 INF: LFT found best fwhm score 2.000127 in 152 ms
17-02-28 20:54:24.764 -08 000000051 INF: LFT found good score at index 7681 with fwhm value 2.000127. Next cycle, cycle 6 starting Z position for top surface is at -0.157 mm FC:B, C:5,L:5,T
17-02-28 20:54:24.764 -08 000000029 INF: ===================LookupFocusTracking===================
17-02-28 20:54:24.764 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:54:24.764 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:54:24.764 -08 000000029 INF: ======================================
17-02-28 20:54:24.764 -08 000000104 INF: ======================================
17-02-28 20:54:24.764 -08 000000051 INF: ======================================
17-02-28 20:54:24.787 -08 000000088 INF: LFT found best fwhm score 2.125581 in 166 ms
17-02-28 20:54:24.787 -08 000000088 INF: LFT found good score at index 2617 with fwhm value 2.125581. Next cycle, cycle 6 starting Z position for top surface is at -0.158 mm FC:B, C:5,L:5,T
17-02-28 20:54:24.787 -08 000000088 INF: ===================LookupFocusTracking===================
17-02-28 20:54:24.787 -08 000000088 INF: ======================================
17-02-28 20:54:24.788 -08 000000061 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:54:24.789 -08 000000061 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:5,L:5,T
17-02-28 20:54:24.790 -08 000000061 INF: ======================================
17-02-28 20:54:24.791 -08 000000040 INF: ======================================
17-02-28 20:54:24.792 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:54:24.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:54:24.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:54:24.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:54:24.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:54:24.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:54:24.795 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:54:24.795 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:54:24.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:54:24.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:54:24.818 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:54:24.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5===================
17-02-28 20:54:24.818 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:24.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:54:24.819 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:54:24.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:54:24.819 -08 000000042 INF: Transformed XStagePosition from 80.79964 mm to 80.7830768413842 mm.
17-02-28 20:54:24.884 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5592993552573 mm.
17-02-28 20:54:24.884 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3592993552573 mm.
17-02-28 20:54:24.884 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4500493552573 mm.
17-02-28 20:54:24.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:54:24.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:24.888 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -155.3 um, section = E_1
17-02-28 20:54:24.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:54:24.891 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:54:24.894 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:54:24.894 -08 000000080 INF: ===================MoveEmissionFilters===================
17-02-28 20:54:24.895 -08 000000111 INF: ===================Move X,Y===================
17-02-28 20:54:24.895 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:54:24.895 -08 000000071 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:54:24.896 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:54:24.896 -08 000000111 INF: ===================Move X,Y, Parallel===================
17-02-28 20:54:24.896 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:54:24.897 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:54:24.897 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:54:24.898 -08 000000055 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:54:24.899 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:24.900 -08 000000055 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:54:24.902 -08 000000123 INF: ===================Move X Motor without settling===================
17-02-28 20:54:24.902 -08 000000123 INF: X Motor: Xmit PR VM\n
17-02-28 20:54:24.902 -08 000000119 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:54:24.903 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:54:24.903 -08 000000009 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:54:24.903 -08 000000119 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:54:24.903 -08 000000009 INF: ======================================
17-02-28 20:54:24.904 -08 000000061 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:24.904 -08 000000089 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:54:24.904 -08 000000089 INF: ======================================
17-02-28 20:54:24.905 -08 000000061 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:54:24.905 -08 000000061 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:54:24.905 -08 000000061 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:54:24.906 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:54:24.906 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1108 Request: {"Cycle":5,"Lane":5,"Tile":1108,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF243","HCSMMF211","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:24.907 -08 000000089 INF: ===================Camera Arm TDI===================
17-02-28 20:54:24.907 -08 000000129 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:54:24.907 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:54:24.907 -08 000000129 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:54:24.907 -08 000000009 INF: ===================Move Y Motor without settling===================
17-02-28 20:54:24.908 -08 000000009 INF: Y Motor: Moving to 64.5593 mm @25.000 mm/sec, started at 14.9120 mm
17-02-28 20:54:24.908 -08 000000087 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:54:24.908 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:54:24.908 -08 000000087 INF: ======================================
17-02-28 20:54:24.908 -08 000000009 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:54:24.908 -08 000000009 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:24.909 -08 000000089 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:54:24.910 -08 000000055 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:54:24.910 -08 000000087 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:54:24.910 -08 000000129 INF: ======================================
17-02-28 20:54:24.911 -08 000000027 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:54:24.911 -08 000000087 INF: ======================================
17-02-28 20:54:24.911 -08 000000118 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:54:24.911 -08 000000027 INF: ======================================
17-02-28 20:54:24.911 -08 000000104 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:54:24.911 -08 000000118 INF: ======================================
17-02-28 20:54:24.912 -08 000000104 INF: ======================================
17-02-28 20:54:24.912 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:54:24.912 -08 000000055 INF: ======================================
17-02-28 20:54:24.912 -08 000000119 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:54:24.913 -08 000000077 INF: ======================================
17-02-28 20:54:24.914 -08 000000119 INF: ======================================
17-02-28 20:54:24.916 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:54:24.919 -08 000000062 INF: ======================================
17-02-28 20:54:24.921 -08 000000080 INF: ======================================
17-02-28 20:54:24.948 -08 000000027 INF: FPGA: Recv ZSEL 
17-02-28 20:54:24.949 -08 000000123 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:54:24.949 -08 000000123 INF: X Motor: Xmit PR VI\n
17-02-28 20:54:24.949 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:24.949 -08 000000061 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:54:24.949 -08 000000061 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:54:24.950 -08 000000009 INF: Y Motor: Recv ok\r
17-02-28 20:54:24.950 -08 000000009 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:54:24.950 -08 000000009 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:25.003 -08 000000107 INF: FPGA: Recv TDIBB
17-02-28 20:54:25.003 -08 000000061 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:54:25.005 -08 000000123 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:54:25.005 -08 000000123 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:54:25.005 -08 000000123 INF: X Motor: Moving to 80.7831 mm @15.000 mm/sec, started at 79.6787 mm
17-02-28 20:54:25.005 -08 000000061 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:54:25.005 -08 000000009 INF: Y Motor: Recv ok\r
17-02-28 20:54:25.005 -08 000000009 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:25.005 -08 000000123 INF: X Motor: Xmit MA 8922\n
17-02-28 20:54:25.005 -08 000000061 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:25.007 -08 000000061 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:54:25.007 -08 000000061 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:54:25.007 -08 000000061 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:54:25.033 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1105 Request: {"Cycle":5,"Lane":5,"Tile":1105,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF220","HCSMMF227","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.036 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1112 Request: {"Cycle":5,"Lane":5,"Tile":1112,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF265","HCSMMF195","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.037 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1101 Request: {"Cycle":5,"Lane":5,"Tile":1101,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF262","HCSMMF223","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.038 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1114 Request: {"Cycle":5,"Lane":5,"Tile":1114,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF202","HCSMMF240","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.040 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1113 Request: {"Cycle":5,"Lane":5,"Tile":1113,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF257","HCSMMF249","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.041 -08 000000124 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1109 Request: {"Cycle":5,"Lane":5,"Tile":1109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF235","HCSMMF271","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.042 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1111 Request: {"Cycle":5,"Lane":5,"Tile":1111,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF272","HCSMMF194","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.043 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1103 Request: {"Cycle":5,"Lane":5,"Tile":1103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF225","HCSMMF258","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.044 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1102 Request: {"Cycle":5,"Lane":5,"Tile":1102,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF217","HCSMMF264","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.047 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1107 Request: {"Cycle":5,"Lane":5,"Tile":1107,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF236","HCSMMF209","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.049 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1104 Request: {"Cycle":5,"Lane":5,"Tile":1104,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF287","HCSMMF191","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.051 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1115 Request: {"Cycle":5,"Lane":5,"Tile":1115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF207","HCSMMF273","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.052 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1110 Request: {"Cycle":5,"Lane":5,"Tile":1110,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF281","HCSMMF285","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.054 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1116 Request: {"Cycle":5,"Lane":5,"Tile":1116,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF214","HCSMMF206","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.055 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1106 Request: {"Cycle":5,"Lane":5,"Tile":1106,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF260","HCSMMF246","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.057 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1120 Request: {"Cycle":5,"Lane":5,"Tile":1120,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF253","HCSMMF270","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.059 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1119 Request: {"Cycle":5,"Lane":5,"Tile":1119,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF245","HCSMMF186","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.062 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1117 Request: {"Cycle":5,"Lane":5,"Tile":1117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF196","HCSMMF218","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.064 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1124 Request: {"Cycle":5,"Lane":5,"Tile":1124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF284","HCSMMF269","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.066 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:54:25.066 -08 000000061 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:25.066 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1118 Request: {"Cycle":5,"Lane":5,"Tile":1118,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF248","HCSMMF230","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.067 -08 000000123 INF: X Motor: Recv MA 8922\r\n>
17-02-28 20:54:25.067 -08 000000009 INF: Y Motor: Recv v 0\r
17-02-28 20:54:25.067 -08 000000009 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:25.067 -08 000000123 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:54:25.067 -08 000000009 INF: Y Motor: Set target position to 5955930 encoder counts
17-02-28 20:54:25.067 -08 000000009 INF: Y Motor: Xmit s r0xca 5955930\r
17-02-28 20:54:25.068 -08 000000061 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:54:25.068 -08 000000061 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:25.070 -08 000000061 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:54:25.070 -08 000000061 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:54:25.070 -08 000000061 INF: Z Motor: Arming to move to -0.1153 mm
17-02-28 20:54:25.070 -08 000000061 INF: FPGA: Xmit ZYT 6435930 4\n
17-02-28 20:54:25.071 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1125 Request: {"Cycle":5,"Lane":5,"Tile":1125,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF239","HCSMMF199","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.076 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1121 Request: {"Cycle":5,"Lane":5,"Tile":1121,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF189","HCSMMF252","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.079 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1122 Request: {"Cycle":5,"Lane":5,"Tile":1122,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF190","HCSMMF219","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.101 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1128 Request: {"Cycle":5,"Lane":5,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF176","HCSMMF201","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.104 -08 000000122 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1123 Request: {"Cycle":5,"Lane":5,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF210","HCSMMF226","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.106 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1127 Request: {"Cycle":5,"Lane":5,"Tile":1127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF215","HCSMMF280","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.112 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 5 Tile: 1126 Request: {"Cycle":5,"Lane":5,"Tile":1126,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF216","HCSMMF188","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:54:25.126 -08 000000109 INF: FPGA: Recv ZYT 
17-02-28 20:54:25.126 -08 000000061 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1491200 enc / 14.912 mm / ) = 6435930 enc / 64.359 mm
17-02-28 20:54:25.126 -08 000000061 INF: FPGA: Xmit ZARM 30216\n
17-02-28 20:54:25.128 -08 000000009 INF: Y Motor: Recv ok\r
17-02-28 20:54:25.128 -08 000000009 INF: Y Motor: Start the move command
17-02-28 20:54:25.128 -08 000000009 INF: Y Motor: Xmit t 1\r
17-02-28 20:54:25.139 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:25.145 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:54:25.188 -08 000000107 INF: FPGA: Recv ZARM
17-02-28 20:54:25.188 -08 000000061 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9336 ms
17-02-28 20:54:25.188 -08 000000061 INF: Z Motor: ArmAbsStepped took 118.0674 ms
17-02-28 20:54:25.188 -08 000000061 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:54:25.190 -08 000000009 INF: Y Motor: Recv ok\r
17-02-28 20:54:25.190 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:54:25.190 -08 000000009 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:54:25.190 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:25.191 -08 000000061 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:54:25.192 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:54:25.193 -08 000000061 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:54:25.193 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:54:25.194 -08 000000061 INF: ======================================
17-02-28 20:54:25.199 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:25.238 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:25.238 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:54:25.255 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:25.274 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:25.280 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:54:25.317 -08 000000009 INF: Y Motor: Unshifted Position: 1076169
17-02-28 20:54:25.367 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:25.384 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:25.390 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:54:25.491 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:25.493 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:25.499 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:54:25.504 -08 000000089 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:54:25.504 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:54:25.504 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:54:25.505 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:25.519 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:54:25.521 -08 000000089 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:54:25.566 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:25.580 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:54:25.629 -08 000000009 INF: Y Motor: Unshifted Position: 1785359
17-02-28 20:54:25.679 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:25.689 -08 000000123 INF: X Motor: Xmit PR ER\n
17-02-28 20:54:25.754 -08 000000123 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:54:25.754 -08 000000123 INF: X Motor: Moved to 80.7822 after 687 ms
17-02-28 20:54:25.754 -08 000000123 INF: ======================================
17-02-28 20:54:25.804 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:25.816 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:25.867 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:54:25.876 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:25.941 -08 000000009 INF: Y Motor: Unshifted Position: 2561221
17-02-28 20:54:25.991 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:26.079 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:26.126 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:26.133 -08 000000089 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:54:26.133 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:54:26.133 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:54:26.149 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:54:26.150 -08 000000089 INF: ===================Camera Arm TDI===================
17-02-28 20:54:26.151 -08 000000089 INF: ======================================
17-02-28 20:54:26.153 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:54:26.154 -08 000000071 INF: ======================================
17-02-28 20:54:26.204 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:26.204 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:26.205 -08 000000009 INF: Y Motor: Unshifted Position: 3226236
17-02-28 20:54:26.205 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:26.205 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:54:26.205 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:54:26.255 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:26.379 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:26.519 -08 000000009 INF: Y Motor: Unshifted Position: 4008667
17-02-28 20:54:26.569 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:26.693 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:26.831 -08 000000009 INF: Y Motor: Unshifted Position: 4784558
17-02-28 20:54:26.881 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:27.006 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:27.142 -08 000000009 INF: Y Motor: Unshifted Position: 5567825
17-02-28 20:54:27.192 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:27.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:27.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:54:27.316 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:27.455 -08 000000009 INF: Y Motor: Unshifted Position: 5955928
17-02-28 20:54:27.505 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:27.641 -08 000000009 INF: Y Motor: Unshifted Position: 5955931
17-02-28 20:54:27.641 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:54:27.641 -08 000000009 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:27.703 -08 000000009 INF: Y Motor: Recv v 0\r
17-02-28 20:54:27.703 -08 000000009 INF: Y Motor: Moved to 64.5593 after 2512 ms
17-02-28 20:54:27.703 -08 000000009 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:54:27.705 -08 000000095 INF: RunCopyService queue size at 2/28/2017 8:54:27 PM is 0
17-02-28 20:54:27.767 -08 000000009 INF: Y Motor: Recv v 4096\r
17-02-28 20:54:27.767 -08 000000009 INF: Y Motor: Status After move finished OK:
17-02-28 20:54:27.767 -08 000000009 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:27.827 -08 000000009 INF: Y Motor: Recv v 0\r
17-02-28 20:54:27.827 -08 000000009 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:27.827 -08 000000009 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:54:27.892 -08 000000009 INF: Y Motor: Recv v 402653184\r
17-02-28 20:54:27.892 -08 000000009 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:54:27.892 -08 000000009 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:54:27.892 -08 000000009 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:54:27.954 -08 000000009 INF: Y Motor: Recv v 0\r
17-02-28 20:54:27.954 -08 000000009 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:54:27.954 -08 000000009 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:54:27.954 -08 000000009 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:28.016 -08 000000009 INF: Y Motor: Recv ok\r
17-02-28 20:54:28.016 -08 000000009 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:54:28.016 -08 000000009 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:28.079 -08 000000009 INF: Y Motor: Recv ok\r
17-02-28 20:54:28.079 -08 000000009 INF: ======================================
17-02-28 20:54:28.080 -08 000000111 INF: ===================Move X,Y===================
17-02-28 20:54:28.082 -08 000000111 INF: ======================================
17-02-28 20:54:28.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:54:28.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:28.083 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:54:28.083 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:54:28.141 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:54:28.141 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:54:28.200 -08 000000107 INF: FPGA: Recv ZFREQCL
17-02-28 20:54:28.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:54:28.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:28.201 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:54:28.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:28.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:54:28.262 -08 000000031 INF: FPGA: Recv TDIYERD 6455931
17-02-28 20:54:28.262 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455931 counts (64.559 mm)
17-02-28 20:54:28.263 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:28.263 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:28.264 -08 000000062 INF: ===================TDI FPGA Arm===================
17-02-28 20:54:28.264 -08 000000009 INF: ===================Set YMotor gains for scans===================
17-02-28 20:54:28.264 -08 000000009 INF: ======================================
17-02-28 20:54:28.264 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:28.265 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:54:28.265 -08 000000062 INF: FPGA: Xmit TDIYPOS 6345005\n
17-02-28 20:54:28.328 -08 000000059 INF: FPGA: Recv TDIYPOS
17-02-28 20:54:28.329 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:28.330 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:54:28.330 -08 000000062 INF: FPGA: Xmit TDIYARM3 139264 6435930 1 1\n
17-02-28 20:54:28.390 -08 000000035 INF: FPGA: Recv TDIYARM3
17-02-28 20:54:28.390 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:54:28.391 -08 000000062 INF: ===================TDI FPGA Arm===================
17-02-28 20:54:28.392 -08 000000062 INF: ======================================
17-02-28 20:54:28.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:54:28.394 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:54:28.394 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:28.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:28.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:28.396 -08 000000088 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:54:28.396 -08 000000088 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:54:28.396 -08 000000088 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:54:28.396 -08 000000088 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:54:28.397 -08 000000072 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:54:28.397 -08 000000088 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:54:28.397 -08 000000072 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:54:28.397 -08 000000072 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:54:28.397 -08 000000072 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:54:28.400 -08 000000072 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:54:28.827 -08 000000093 INF: FPGA: Recv EX2MV
17-02-28 20:54:28.827 -08 000000093 INF: FPGA: Recv EX1MV
17-02-28 20:54:28.827 -08 000000072 INF: Excitation Filter 1: Moved -107 steps in 430.0352 ms
17-02-28 20:54:28.831 -08 000000088 INF: Excitation Filter 2: Moved -107 steps in 430.3427 ms
17-02-28 20:54:28.831 -08 000000088 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 434.204 ms
17-02-28 20:54:28.831 -08 000000088 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 434.3094 ms
17-02-28 20:54:28.831 -08 000000088 INF: ======================================
17-02-28 20:54:28.832 -08 000000072 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.1716 ms
17-02-28 20:54:28.832 -08 000000072 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 435.7563 ms
17-02-28 20:54:28.833 -08 000000072 INF: ======================================
17-02-28 20:54:28.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:28.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #5, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:54:28.836 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:54:28.836 -08 000000040 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:54:28.836 -08 000000062 INF: ===================FPGA Z Wait===================
17-02-28 20:54:28.836 -08 000000118 INF: ===================Move Y Motor without settling===================
17-02-28 20:54:28.836 -08 000000062 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:54:28.836 -08 000000118 INF: Y Motor: Moving to 14.9110 mm @6.500 mm/sec, started at 64.5593 mm
17-02-28 20:54:28.836 -08 000000118 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:54:28.836 -08 000000118 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:54:28.836 -08 000000038 INF: ===================Camera TDI, Parallel===================
17-02-28 20:54:28.837 -08 000000040 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:54:28.837 -08 000000040 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:54:28.837 -08 000000059 INF: ===================Camera TDI===================
17-02-28 20:54:28.837 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:54:28.842 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:28.842 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:28.842 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:28.842 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:28.890 -08 000000118 INF: Y Motor: Recv ok\r
17-02-28 20:54:28.890 -08 000000118 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:54:28.890 -08 000000118 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:54:28.952 -08 000000118 INF: Y Motor: Recv ok\r
17-02-28 20:54:28.952 -08 000000118 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:54:28.993 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:28.993 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:28.995 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:28.995 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:29.014 -08 000000118 INF: Y Motor: Recv v 0\r
17-02-28 20:54:29.014 -08 000000118 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:54:29.014 -08 000000118 INF: Y Motor: Set target position to 991096 encoder counts
17-02-28 20:54:29.014 -08 000000118 INF: Y Motor: Xmit s r0xca 991096\r
17-02-28 20:54:29.076 -08 000000118 INF: Y Motor: Recv ok\r
17-02-28 20:54:29.076 -08 000000118 INF: Y Motor: Start the move command
17-02-28 20:54:29.076 -08 000000118 INF: Y Motor: Xmit t 1\r
17-02-28 20:54:29.138 -08 000000118 INF: Y Motor: Recv ok\r
17-02-28 20:54:29.138 -08 000000118 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:54:29.138 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:29.143 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:29.143 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:29.145 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:54:29.145 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:54:29.198 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:54:29.198 -08 000000062 INF: ======================================
17-02-28 20:54:29.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:29.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:54:29.265 -08 000000118 INF: Y Motor: Unshifted Position: 5894296
17-02-28 20:54:29.293 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:54:29.293 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:54:29.293 -08 000000059 INF: ===================Camera #0 Frame #5===================
17-02-28 20:54:29.295 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:54:29.295 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:54:29.295 -08 000000052 INF: ===================Camera #2 Frame #5===================
17-02-28 20:54:29.315 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:29.445 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:29.458 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:54:29.458 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:54:29.458 -08 000000059 INF: ===================Camera #0 Frame #11===================
17-02-28 20:54:29.461 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:54:29.461 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:54:29.461 -08 000000052 INF: ===================Camera #2 Frame #11===================
17-02-28 20:54:29.575 -08 000000118 INF: Y Motor: Unshifted Position: 5690629
17-02-28 20:54:29.625 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:29.627 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:54:29.627 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:54:29.627 -08 000000059 INF: ===================Camera #0 Frame #17===================
17-02-28 20:54:29.630 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:54:29.630 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:54:29.630 -08 000000052 INF: ===================Camera #2 Frame #17===================
17-02-28 20:54:29.749 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:29.798 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:54:29.798 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:54:29.798 -08 000000059 INF: ===================Camera #0 Frame #24===================
17-02-28 20:54:29.799 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:54:29.799 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:54:29.799 -08 000000052 INF: ===================Camera #2 Frame #24===================
17-02-28 20:54:29.888 -08 000000118 INF: Y Motor: Unshifted Position: 5486969
17-02-28 20:54:29.938 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:29.969 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:54:29.969 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:54:29.971 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:54:29.971 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:54:29.971 -08 000000052 INF: ===================Camera #2 Frame #30===================
17-02-28 20:54:29.972 -08 000000059 INF: ===================Camera #0 Frame #30===================
17-02-28 20:54:30.062 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:30.141 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:54:30.141 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:54:30.141 -08 000000059 INF: ===================Camera #0 Frame #36===================
17-02-28 20:54:30.151 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:54:30.151 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:54:30.151 -08 000000052 INF: ===================Camera #2 Frame #37===================
17-02-28 20:54:30.199 -08 000000118 INF: Y Motor: Unshifted Position: 5285461
17-02-28 20:54:30.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:30.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:54:30.249 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:30.310 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:54:30.310 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:54:30.310 -08 000000059 INF: ===================Camera #0 Frame #42===================
17-02-28 20:54:30.323 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:54:30.323 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:54:30.323 -08 000000052 INF: ===================Camera #2 Frame #43===================
17-02-28 20:54:30.373 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:30.485 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:54:30.485 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:54:30.485 -08 000000059 INF: ===================Camera #0 Frame #49===================
17-02-28 20:54:30.493 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:54:30.493 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:54:30.493 -08 000000052 INF: ===================Camera #2 Frame #49===================
17-02-28 20:54:30.512 -08 000000118 INF: Y Motor: Unshifted Position: 5081141
17-02-28 20:54:30.562 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:30.658 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:54:30.658 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:54:30.658 -08 000000059 INF: ===================Camera #0 Frame #55===================
17-02-28 20:54:30.671 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:54:30.671 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:54:30.671 -08 000000052 INF: ===================Camera #2 Frame #56===================
17-02-28 20:54:30.686 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:30.825 -08 000000118 INF: Y Motor: Unshifted Position: 4879642
17-02-28 20:54:30.829 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:54:30.829 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:54:30.829 -08 000000059 INF: ===================Camera #0 Frame #62===================
17-02-28 20:54:30.844 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:54:30.844 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:54:30.844 -08 000000052 INF: ===================Camera #2 Frame #62===================
17-02-28 20:54:30.875 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:30.999 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:31.000 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:54:31.000 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:54:31.000 -08 000000059 INF: ===================Camera #0 Frame #68===================
17-02-28 20:54:31.013 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:54:31.013 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:54:31.013 -08 000000052 INF: ===================Camera #2 Frame #68===================
17-02-28 20:54:31.135 -08 000000118 INF: Y Motor: Unshifted Position: 4675978
17-02-28 20:54:31.168 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:54:31.168 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:54:31.168 -08 000000059 INF: ===================Camera #0 Frame #74===================
17-02-28 20:54:31.183 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:54:31.183 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:54:31.183 -08 000000052 INF: ===================Camera #2 Frame #75===================
17-02-28 20:54:31.185 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:31.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:31.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:31.207 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:54:31.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:31.305 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:54:31.309 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:31.337 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:54:31.337 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:54:31.337 -08 000000059 INF: ===================Camera #0 Frame #80===================
17-02-28 20:54:31.356 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:54:31.356 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:54:31.356 -08 000000052 INF: ===================Camera #2 Frame #81===================
17-02-28 20:54:31.386 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:54:31.386 -08 000000018 INF: Current Position of Pump is: 9600
17-02-28 20:54:31.448 -08 000000118 INF: Y Motor: Unshifted Position: 4472520
17-02-28 20:54:31.486 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:54:31.498 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:31.505 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:54:31.505 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:54:31.505 -08 000000059 INF: ===================Camera #0 Frame #86===================
17-02-28 20:54:31.525 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:54:31.525 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:54:31.525 -08 000000052 INF: ===================Camera #2 Frame #87===================
17-02-28 20:54:31.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:54:31.571 -08 000000018 INF: Current Position of Pump is: 9600
17-02-28 20:54:31.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:54:31.622 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:31.671 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD9600R\r
17-02-28 20:54:31.673 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:54:31.673 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:54:31.673 -08 000000059 INF: ===================Camera #0 Frame #93===================
17-02-28 20:54:31.694 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:54:31.694 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:54:31.694 -08 000000052 INF: ===================Camera #2 Frame #93===================
17-02-28 20:54:31.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:31.758 -08 000000118 INF: Y Motor: Unshifted Position: 4270802
17-02-28 20:54:31.808 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:31.844 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:54:31.844 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:54:31.844 -08 000000059 INF: ===================Camera #0 Frame #99===================
17-02-28 20:54:31.857 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:31.863 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:54:31.863 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:54:31.863 -08 000000052 INF: ===================Camera #2 Frame #100===================
17-02-28 20:54:31.935 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:31.947 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:32.012 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:54:32.012 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:54:32.012 -08 000000059 INF: ===================Camera #0 Frame #105===================
17-02-28 20:54:32.035 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:54:32.035 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:54:32.035 -08 000000052 INF: ===================Camera #2 Frame #106===================
17-02-28 20:54:32.072 -08 000000118 INF: Y Motor: Unshifted Position: 4066693
17-02-28 20:54:32.122 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:32.180 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:54:32.180 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:54:32.180 -08 000000059 INF: ===================Camera #0 Frame #111===================
17-02-28 20:54:32.197 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:32.204 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:54:32.204 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:54:32.204 -08 000000052 INF: ===================Camera #2 Frame #112===================
17-02-28 20:54:32.246 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:32.259 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:32.348 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:54:32.348 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:54:32.348 -08 000000059 INF: ===================Camera #0 Frame #117===================
17-02-28 20:54:32.373 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:54:32.373 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:54:32.373 -08 000000052 INF: ===================Camera #2 Frame #118===================
17-02-28 20:54:32.383 -08 000000118 INF: Y Motor: Unshifted Position: 3864332
17-02-28 20:54:32.433 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:32.509 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:32.516 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:54:32.516 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:54:32.516 -08 000000059 INF: ===================Camera #0 Frame #124===================
17-02-28 20:54:32.542 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:54:32.542 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:54:32.542 -08 000000052 INF: ===================Camera #2 Frame #125===================
17-02-28 20:54:32.557 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:32.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:32.687 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:54:32.687 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:54:32.687 -08 000000059 INF: ===================Camera #0 Frame #130===================
17-02-28 20:54:32.696 -08 000000118 INF: Y Motor: Unshifted Position: 3660881
17-02-28 20:54:32.714 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:54:32.714 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:54:32.714 -08 000000052 INF: ===================Camera #2 Frame #131===================
17-02-28 20:54:32.746 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:32.821 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:32.855 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:54:32.855 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:54:32.855 -08 000000059 INF: ===================Camera #0 Frame #136===================
17-02-28 20:54:32.870 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:32.881 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:32.883 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:54:32.883 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:54:32.883 -08 000000052 INF: ===================Camera #2 Frame #137===================
17-02-28 20:54:33.006 -08 000000118 INF: Y Motor: Unshifted Position: 3459166
17-02-28 20:54:33.023 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:54:33.023 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:54:33.023 -08 000000059 INF: ===================Camera #0 Frame #142===================
17-02-28 20:54:33.052 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:54:33.052 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:54:33.052 -08 000000052 INF: ===================Camera #2 Frame #143===================
17-02-28 20:54:33.056 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:33.131 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:33.183 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:33.191 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:54:33.191 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:54:33.191 -08 000000059 INF: ===================Camera #0 Frame #148===================
17-02-28 20:54:33.195 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:33.221 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:54:33.221 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:54:33.221 -08 000000052 INF: ===================Camera #2 Frame #150===================
17-02-28 20:54:33.318 -08 000000118 INF: Y Motor: Unshifted Position: 3253113
17-02-28 20:54:33.359 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:54:33.359 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:54:33.359 -08 000000059 INF: ===================Camera #0 Frame #155===================
17-02-28 20:54:33.368 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:33.393 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:54:33.393 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:54:33.393 -08 000000052 INF: ===================Camera #2 Frame #156===================
17-02-28 20:54:33.445 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:33.493 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:33.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:33.507 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:54:33.507 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:54:33.530 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:54:33.530 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:54:33.530 -08 000000059 INF: ===================Camera #0 Frame #161===================
17-02-28 20:54:33.562 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:54:33.562 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:54:33.562 -08 000000052 INF: ===================Camera #2 Frame #162===================
17-02-28 20:54:33.631 -08 000000118 INF: Y Motor: Unshifted Position: 3052056
17-02-28 20:54:33.681 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:33.698 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:54:33.698 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:54:33.698 -08 000000059 INF: ===================Camera #0 Frame #167===================
17-02-28 20:54:33.731 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:54:33.731 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:54:33.731 -08 000000052 INF: ===================Camera #2 Frame #168===================
17-02-28 20:54:33.806 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:33.867 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:54:33.867 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:54:33.867 -08 000000059 INF: ===================Camera #0 Frame #173===================
17-02-28 20:54:33.901 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:54:33.901 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:54:33.901 -08 000000052 INF: ===================Camera #2 Frame #175===================
17-02-28 20:54:33.944 -08 000000118 INF: Y Motor: Unshifted Position: 2849038
17-02-28 20:54:33.994 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:34.037 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:54:34.037 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:54:34.037 -08 000000059 INF: ===================Camera #0 Frame #180===================
17-02-28 20:54:34.075 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:54:34.075 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:54:34.075 -08 000000052 INF: ===================Camera #2 Frame #181===================
17-02-28 20:54:34.118 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:34.210 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:54:34.210 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:54:34.210 -08 000000059 INF: ===================Camera #0 Frame #186===================
17-02-28 20:54:34.246 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:54:34.246 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:54:34.246 -08 000000052 INF: ===================Camera #2 Frame #187===================
17-02-28 20:54:34.255 -08 000000118 INF: Y Motor: Unshifted Position: 2647543
17-02-28 20:54:34.305 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:34.380 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:54:34.380 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:54:34.380 -08 000000059 INF: ===================Camera #0 Frame #192===================
17-02-28 20:54:34.415 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:54:34.415 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:54:34.415 -08 000000052 INF: ===================Camera #2 Frame #194===================
17-02-28 20:54:34.430 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:34.550 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:54:34.550 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:54:34.550 -08 000000059 INF: ===================Camera #0 Frame #199===================
17-02-28 20:54:34.568 -08 000000118 INF: Y Motor: Unshifted Position: 2443444
17-02-28 20:54:34.589 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:54:34.589 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:54:34.589 -08 000000052 INF: ===================Camera #2 Frame #200===================
17-02-28 20:54:34.607 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:54:34.618 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:34.691 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:34.722 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:54:34.722 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:54:34.722 -08 000000059 INF: ===================Camera #0 Frame #205===================
17-02-28 20:54:34.742 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:34.759 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:54:34.759 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:54:34.759 -08 000000052 INF: ===================Camera #2 Frame #206===================
17-02-28 20:54:34.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:34.877 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:54:34.879 -08 000000118 INF: Y Motor: Unshifted Position: 2241728
17-02-28 20:54:34.892 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:54:34.892 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:54:34.892 -08 000000059 INF: ===================Camera #0 Frame #211===================
17-02-28 20:54:34.928 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:54:34.928 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:54:34.928 -08 000000052 INF: ===================Camera #2 Frame #212===================
17-02-28 20:54:34.929 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:35.053 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:35.062 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:54:35.062 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:54:35.062 -08 000000059 INF: ===================Camera #0 Frame #217===================
17-02-28 20:54:35.098 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:54:35.098 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:54:35.098 -08 000000052 INF: ===================Camera #2 Frame #219===================
17-02-28 20:54:35.127 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:54:35.191 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:54:35.191 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:35.191 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:54:35.192 -08 000000118 INF: Y Motor: Unshifted Position: 2037625
17-02-28 20:54:35.232 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:54:35.232 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:54:35.232 -08 000000059 INF: ===================Camera #0 Frame #224===================
17-02-28 20:54:35.242 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:35.272 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:54:35.272 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:54:35.272 -08 000000052 INF: ===================Camera #2 Frame #225===================
17-02-28 20:54:35.368 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:35.405 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:54:35.405 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:54:35.405 -08 000000059 INF: ===================Camera #0 Frame #230===================
17-02-28 20:54:35.442 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:54:35.442 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:54:35.442 -08 000000052 INF: ===================Camera #2 Frame #231===================
17-02-28 20:54:35.503 -08 000000118 INF: Y Motor: Unshifted Position: 1833958
17-02-28 20:54:35.553 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:35.563 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:35.563 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:35.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:35.564 -08 000000018 INF: WaitCommand(40000) start
17-02-28 20:54:35.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left===================
17-02-28 20:54:35.575 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:54:35.575 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:54:35.575 -08 000000059 INF: ===================Camera #0 Frame #236===================
17-02-28 20:54:35.612 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:54:35.612 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:54:35.612 -08 000000052 INF: ===================Camera #2 Frame #238===================
17-02-28 20:54:35.677 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:35.743 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:54:35.743 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:54:35.743 -08 000000059 INF: ===================Camera #0 Frame #242===================
17-02-28 20:54:35.786 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:54:35.786 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:54:35.786 -08 000000052 INF: ===================Camera #2 Frame #244===================
17-02-28 20:54:35.816 -08 000000118 INF: Y Motor: Unshifted Position: 1631583
17-02-28 20:54:35.866 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:35.911 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:54:35.911 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:54:35.911 -08 000000059 INF: ===================Camera #0 Frame #249===================
17-02-28 20:54:35.956 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:54:35.956 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:54:35.956 -08 000000052 INF: ===================Camera #2 Frame #250===================
17-02-28 20:54:35.990 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:36.083 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:54:36.083 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:54:36.083 -08 000000059 INF: ===================Camera #0 Frame #255===================
17-02-28 20:54:36.126 -08 000000118 INF: Y Motor: Unshifted Position: 1430090
17-02-28 20:54:36.127 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:54:36.127 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:54:36.127 -08 000000052 INF: ===================Camera #2 Frame #257===================
17-02-28 20:54:36.176 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:36.253 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:54:36.253 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:54:36.253 -08 000000059 INF: ===================Camera #0 Frame #261===================
17-02-28 20:54:36.300 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:54:36.300 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:54:36.300 -08 000000052 INF: ===================Camera #2 Frame #263===================
17-02-28 20:54:36.303 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:36.423 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:54:36.423 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:54:36.423 -08 000000059 INF: ===================Camera #0 Frame #267===================
17-02-28 20:54:36.440 -08 000000118 INF: Y Motor: Unshifted Position: 1225759
17-02-28 20:54:36.472 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:54:36.472 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:54:36.472 -08 000000052 INF: ===================Camera #2 Frame #269===================
17-02-28 20:54:36.491 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:36.563 -08 000000119 INF: FPGA: Recv TDIYWAIT
17-02-28 20:54:36.563 -08 000000040 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:54:36.564 -08 000000040 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:54:36.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:54:36.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #6, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left===================
17-02-28 20:54:36.565 -08 000000123 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:54:36.565 -08 000000111 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:54:36.566 -08 000000123 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:54:36.566 -08 000000123 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:54:36.566 -08 000000123 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:54:36.566 -08 000000111 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:54:36.566 -08 000000123 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:54:36.566 -08 000000111 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:54:36.566 -08 000000111 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:54:36.567 -08 000000111 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:54:36.594 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:54:36.594 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:54:36.594 -08 000000059 INF: ===================Camera #0 Frame #272===================
17-02-28 20:54:36.610 -08 000000059 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:54:36.611 -08 000000059 INF: ===================CameraTDI Cleanup===================
17-02-28 20:54:36.615 -08 000000118 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:54:36.740 -08 000000059 INF: Camera #0 ReleaseBuffer
17-02-28 20:54:36.740 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:54:36.740 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:54:36.740 -08 000000052 INF: ===================Camera #2 Frame #272===================
17-02-28 20:54:36.740 -08 000000059 INF: ===================Camera TDI===================
17-02-28 20:54:36.749 -08 000000052 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:54:36.750 -08 000000052 INF: ===================CameraT