17-03-02 12:55:41.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162===================
17-03-02 12:55:41.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle===================
17-03-02 12:55:41.244 -08 000000104 INF: FPGA: Recv T1MOVETO 43
17-03-02 12:55:41.245 -08 000000104 INF: FPGA: Recv T2MOVETO 70
17-03-02 12:55:41.245 -08 000000060 INF: Tilt Motor 1: To move from 4.997 to 5.063 (0.066 mm) should take 43 steps, but required 43 steps (0.066 mm). Slippage = 0.000 mm (0.00%)
17-03-02 12:55:41.245 -08 000000107 INF: Tilt Motor 2: To move from 5.400 to 5.292 (-0.108 mm) should take 71 steps, but required 70 steps (0.107 mm). Slippage = -0.002 mm (0.01%)
17-03-02 12:55:41.245 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:55:41.245 -08 000000060 INF: FPGA: Xmit T1RD\n
17-03-02 12:55:41.245 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:55:41.246 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:55:41.246 -08 000000107 INF: FPGA: Xmit T2RD\n
17-03-02 12:55:41.264 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:41.304 -08 000000075 INF: FPGA: Recv T3MOVETO 71
17-03-02 12:55:41.304 -08 000000075 INF: FPGA: Recv T1RD 19932
17-03-02 12:55:41.304 -08 000000075 INF: FPGA: Recv T2RD 20840
17-03-02 12:55:41.304 -08 000000062 INF: Tilt Motor 3: To move from 5.345 to 5.237 (-0.108 mm) should take 71 steps, but required 71 steps (0.108 mm). Slippage = 0.000 mm (0.00%)
17-03-02 12:55:41.304 -08 000000062 INF: FPGA: Xmit T3RD\n
17-03-02 12:55:41.304 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3322 + 0/6
17-03-02 12:55:41.304 -08 000000107 INF: Tilt Motor 2: Encoder: at motor step 3473 + 2/6
17-03-02 12:55:41.305 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:55:41.305 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (6)===================
17-03-02 12:55:41.305 -08 000000018 INF: Valve A1: Go to position 6
17-03-02 12:55:41.305 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:55:41.307 -08 000000060 INF: FPGA: Xmit T1RD\n
17-03-02 12:55:41.310 -08 000000107 INF: FPGA: Xmit T2RD\n
17-03-02 12:55:41.329 -08 000000056 INF: RunCopyService queue size at 3/2/2017 12:55:41 PM is 1
17-03-02 12:55:41.369 -08 000000082 INF: FPGA: Recv T3RD 20619
17-03-02 12:55:41.369 -08 000000082 INF: FPGA: Recv T1RD 19932
17-03-02 12:55:41.369 -08 000000082 INF: FPGA: Recv T2RD 20840
17-03-02 12:55:41.369 -08 000000107 INF: Tilt Motor 2: Encoder: at motor step 3473 + 2/6
17-03-02 12:55:41.369 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3322 + 0/6
17-03-02 12:55:41.369 -08 000000062 INF: Tilt Motor 3: Encoder: at motor step 3436 + 3/6
17-03-02 12:55:41.369 -08 000000107 INF: FPGA: Xmit T2RD\n
17-03-02 12:55:41.372 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 3\r
17-03-02 12:55:41.372 -08 000000018 INF: Valve A1: 641.245 seconds since last move, > 10.000 seconds required between moves
17-03-02 12:55:41.372 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 3 to 6
17-03-02 12:55:41.372 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW6\r
17-03-02 12:55:41.372 -08 000000060 INF: FPGA: Xmit T1RD\n
17-03-02 12:55:41.372 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-03-02 12:55:41.372 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:55:41.375 -08 000000062 INF: FPGA: Xmit T3RD\n
17-03-02 12:55:41.429 -08 000000081 INF: FPGA: Recv T2RD 20840
17-03-02 12:55:41.429 -08 000000081 INF: FPGA: Recv T1RD 19932
17-03-02 12:55:41.429 -08 000000081 INF: FPGA: Recv T3RD 20619
17-03-02 12:55:41.429 -08 000000062 INF: Tilt Motor 3: Encoder: at motor step 3436 + 3/6
17-03-02 12:55:41.429 -08 000000107 INF: Tilt Motor 2: Encoder: at motor step 3473 + 2/6
17-03-02 12:55:41.429 -08 000000107 INF: Tilt Motor 2: After move to 5.2918, error = 0.0016, min/max error = -0.0020/0.0017, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:55:41.429 -08 000000062 INF: FPGA: Xmit T3RD\n
17-03-02 12:55:41.429 -08 000000107 INF: Tilt Motor 2: Moved to 5.2934 after 431.4642 ms
17-03-02 12:55:41.429 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3322 + 0/6
17-03-02 12:55:41.429 -08 000000060 INF: Tilt Motor 1: After move to 5.0631, error = -0.0004, min/max error = -0.0017/0.0019, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:55:41.429 -08 000000060 INF: Tilt Motor 1: Moved to 5.0627 after 431.9014 ms
17-03-02 12:55:41.430 -08 000000107 INF: ======================================
17-03-02 12:55:41.430 -08 000000060 INF: ======================================
17-03-02 12:55:41.491 -08 000000057 INF: FPGA: Recv T3RD 20619
17-03-02 12:55:41.491 -08 000000062 INF: Tilt Motor 3: Encoder: at motor step 3436 + 3/6
17-03-02 12:55:41.491 -08 000000062 INF: Tilt Motor 3: After move to 5.2369, error = 0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:55:41.491 -08 000000062 INF: Tilt Motor 3: Moved to 5.2372 after 493.5389 ms
17-03-02 12:55:41.492 -08 000000062 INF: ======================================
17-03-02 12:55:41.493 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:41.494 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:41.494 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.06307870269996, m2=5.29180490671937, m3=5.23694090671937
17-03-02 12:55:41.500 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-03-02 12:55:41.509 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-03-02 12:55:41.509 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-03-02 12:55:41.509 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-03-02 12:55:41.509 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:41.509 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:41.513 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-03-02 12:55:41.513 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-03-02 12:55:41.513 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-03-02 12:55:41.559 -08 000000004 INF: FPGA: Recv ZSTEP 
17-03-02 12:55:41.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:41.560 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:55:41.560 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1026 mm
17-03-02 12:55:41.560 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-03-02 12:55:41.616 -08 000000107 INF: FPGA: Recv ZTRG 
17-03-02 12:55:41.616 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-03-02 12:55:41.681 -08 000000092 INF: FPGA: Recv ZYT 
17-03-02 12:55:41.681 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-03-02 12:55:41.681 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-03-02 12:55:41.743 -08 000000071 INF: FPGA: Recv @LOG Trigger Camera
17-03-02 12:55:41.743 -08 000000071 INF: FPGA: Recv ZMV 
17-03-02 12:55:41.743 -08 000000006 INF: FPGA: Trigger Camera
17-03-02 12:55:41.743 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.0352 ms
17-03-02 12:55:41.743 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-03-02 12:55:41.805 -08 000000083 INF: FPGA: Recv ZDACR 60292
17-03-02 12:55:41.805 -08 000000042 INF: Z Motor: MoveAndTrigger took 244.8947 ms w/comms
17-03-02 12:55:41.805 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:55:41.805 -08 000000042 INF: Z Motor: MoveAbsStepped took 245.1167 ms
17-03-02 12:55:41.806 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 6\r
17-03-02 12:55:41.806 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:41.806 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:55:41.806 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-03-02 12:55:41.806 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-03-02 12:55:41.815 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-03-02 12:55:41.815 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:55:41.815 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:55:41.815 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-03-02 12:55:41.815 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-03-02 12:55:41.867 -08 000000044 INF: FPGA: Recv ZSTEP 
17-03-02 12:55:41.878 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:41.878 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-03-02 12:55:41.887 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-03-02 12:55:41.887 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:55:41.887 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:55:41.889 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:41.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-03-02 12:55:41.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:41.890 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1
17-03-02 12:55:41.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:55:41.891 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:55:41.892 -08 000000108 INF: ===================MoveEmissionFilters===================
17-03-02 12:55:41.892 -08 000000138 INF: ===================Move X,Y===================
17-03-02 12:55:41.893 -08 000000138 INF: ===================Move X,Y, Parallel===================
17-03-02 12:55:41.893 -08 000000136 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:55:41.893 -08 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:55:41.893 -08 000000009 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:55:41.893 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:55:41.893 -08 000000132 INF: ===================Move X Motor without settling===================
17-03-02 12:55:41.894 -08 000000136 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:55:41.894 -08 000000132 INF: X Motor: Xmit PR VM\n
17-03-02 12:55:41.894 -08 000000137 INF: ===================Move Y Motor without settling===================
17-03-02 12:55:41.894 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:55:41.894 -08 000000009 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:55:41.894 -08 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:55:41.894 -08 000000137 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.8532 mm
17-03-02 12:55:41.894 -08 000000137 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:55:41.894 -08 000000137 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:55:41.894 -08 000000097 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:55:41.895 -08 000000092 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:55:41.895 -08 000000030 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:55:41.895 -08 000000112 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:55:41.895 -08 000000097 INF: ======================================
17-03-02 12:55:41.895 -08 000000118 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:55:41.895 -08 000000115 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:55:41.895 -08 000000112 INF: ======================================
17-03-02 12:55:41.896 -08 000000092 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:55:41.896 -08 000000115 INF: ======================================
17-03-02 12:55:41.896 -08 000000092 INF: ======================================
17-03-02 12:55:41.896 -08 000000030 INF: ======================================
17-03-02 12:55:41.896 -08 000000136 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:55:41.897 -08 000000118 INF: ======================================
17-03-02 12:55:41.897 -08 000000112 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:55:41.897 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:55:41.898 -08 000000009 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:55:41.898 -08 000000136 INF: ======================================
17-03-02 12:55:41.898 -08 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:55:41.898 -08 000000078 INF: ======================================
17-03-02 12:55:41.899 -08 000000112 INF: ======================================
17-03-02 12:55:41.899 -08 000000009 INF: ======================================
17-03-02 12:55:41.899 -08 000000056 INF: ======================================
17-03-02 12:55:41.900 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:55:41.901 -08 000000058 INF: ======================================
17-03-02 12:55:41.903 -08 000000108 INF: ======================================
17-03-02 12:55:41.937 -08 000000137 INF: Y Motor: Recv ok\r
17-03-02 12:55:41.937 -08 000000137 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:55:41.937 -08 000000137 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:55:41.937 -08 000000132 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:55:41.937 -08 000000132 INF: X Motor: Xmit PR VI\n
17-03-02 12:55:41.993 -08 000000132 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:55:41.993 -08 000000137 INF: Y Motor: Recv ok\r
17-03-02 12:55:41.993 -08 000000137 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:41.993 -08 000000132 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:55:41.993 -08 000000132 INF: X Motor: Moving to 69.1856 mm @15.000 mm/sec, started at 26.0630 mm
17-03-02 12:55:41.993 -08 000000132 INF: X Motor: Xmit MA 4172\n
17-03-02 12:55:42.055 -08 000000132 INF: X Motor: Recv MA 4172\r\n>
17-03-02 12:55:42.055 -08 000000137 INF: Y Motor: Recv v 0\r
17-03-02 12:55:42.055 -08 000000137 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:55:42.055 -08 000000132 INF: X Motor: WaitUntilStopped 62875
17-03-02 12:55:42.055 -08 000000137 INF: Y Motor: Set target position to 5953351 encoder counts
17-03-02 12:55:42.055 -08 000000137 INF: Y Motor: Xmit s r0xca 5953351\r
17-03-02 12:55:42.117 -08 000000137 INF: Y Motor: Recv ok\r
17-03-02 12:55:42.117 -08 000000137 INF: Y Motor: Start the move command
17-03-02 12:55:42.117 -08 000000137 INF: Y Motor: Xmit t 1\r
17-03-02 12:55:42.183 -08 000000137 INF: Y Motor: Recv ok\r
17-03-02 12:55:42.183 -08 000000137 INF: Y Motor: WaitUntilStopped 61987
17-03-02 12:55:42.183 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:42.307 -08 000000137 INF: Y Motor: Unshifted Position: 1075569
17-03-02 12:55:42.357 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:42.365 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:55:42.365 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:55:42.405 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:43.082 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:55:43.090 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 6, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-03-02 12:55:43.133 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:43.182 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:55:43.255 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-03-02 12:55:43.255 -08 000000018 INF: Current Position of Pump is: 0
17-03-02 12:55:43.256 -08 000000137 INF: Y Motor: Unshifted Position: 3375292
17-03-02 12:55:43.306 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:43.355 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-03-02 12:55:43.382 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:43.433 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:43.482 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:43.569 -08 000000137 INF: Y Motor: Unshifted Position: 4160319
17-03-02 12:55:43.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:43.619 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:43.743 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:43.821 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:43.879 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:55:43.880 -08 000000137 INF: Y Motor: Unshifted Position: 4942867
17-03-02 12:55:43.930 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:43.979 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-03-02 12:55:44.057 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:44.068 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:44.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:44.192 -08 000000137 INF: Y Motor: Unshifted Position: 5711202
17-03-02 12:55:44.242 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:44.255 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:55:44.255 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Aspirating port PortB===================
17-03-02 12:55:44.355 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP18240R\r
17-03-02 12:55:44.367 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:44.442 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:44.505 -08 000000137 INF: Y Motor: Unshifted Position: 5953338
17-03-02 12:55:44.505 -08 000000137 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:55:44.505 -08 000000137 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:44.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:44.568 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:44.569 -08 000000137 INF: Y Motor: Recv v 0\r
17-03-02 12:55:44.569 -08 000000137 INF: Y Motor: Moved to 64.5334 after 2386 ms
17-03-02 12:55:44.569 -08 000000137 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:55:44.629 -08 000000137 INF: Y Motor: Recv v 4096\r
17-03-02 12:55:44.629 -08 000000137 INF: Y Motor: Status After move finished OK:
17-03-02 12:55:44.629 -08 000000137 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:44.691 -08 000000137 INF: Y Motor: Recv v 0\r
17-03-02 12:55:44.691 -08 000000137 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:55:44.691 -08 000000137 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:55:44.757 -08 000000137 INF: Y Motor: Recv v 402653184\r
17-03-02 12:55:44.757 -08 000000137 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:55:44.757 -08 000000137 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:55:44.757 -08 000000137 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:55:44.817 -08 000000137 INF: Y Motor: Recv v 0\r
17-03-02 12:55:44.817 -08 000000137 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:55:44.817 -08 000000137 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:55:44.817 -08 000000137 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:55:44.818 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:44.878 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:44.879 -08 000000137 INF: Y Motor: Recv ok\r
17-03-02 12:55:44.879 -08 000000137 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:55:44.879 -08 000000137 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:55:44.943 -08 000000137 INF: Y Motor: Recv ok\r
17-03-02 12:55:44.943 -08 000000137 INF: ======================================
17-03-02 12:55:45.128 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:45.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:45.439 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:45.501 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:45.502 -08 000000132 INF: X Motor: Xmit PR ER\n
17-03-02 12:55:45.567 -08 000000132 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:55:45.567 -08 000000132 INF: X Motor: Moved to 69.1855 after 3512 ms
17-03-02 12:55:45.567 -08 000000132 INF: ======================================
17-03-02 12:55:45.568 -08 000000138 INF: ===================Move X,Y===================
17-03-02 12:55:45.570 -08 000000138 INF: ======================================
17-03-02 12:55:45.571 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:55:45.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:45.572 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-03-02 12:55:45.572 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-03-02 12:55:45.629 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:55:45.629 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-03-02 12:55:45.688 -08 000000054 INF: FPGA: Recv ZFREQCL
17-03-02 12:55:45.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:55:45.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:45.688 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:55:45.750 -08 000000138 INF: FPGA: Recv TDIYERD 6453352
17-03-02 12:55:45.750 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-03-02 12:55:45.750 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:55:45.751 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:45.751 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:55:45.752 -08 000000136 INF: ===================TDI Scan Setup===================
17-03-02 12:55:45.752 -08 000000105 INF: ===================Set YMotor gains for scans===================
17-03-02 12:55:45.752 -08 000000105 INF: ======================================
17-03-02 12:55:45.752 -08 000000136 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:55:45.753 -08 000000136 INF: ===================TDI Scan Setup===================
17-03-02 12:55:45.754 -08 000000136 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:55:45.755 -08 000000136 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:55:45.755 -08 000000136 INF: FPGA: Xmit TDIYPOS 6433351\n
17-03-02 12:55:45.814 -08 000000097 INF: FPGA: Recv TDIYPOS
17-03-02 12:55:45.814 -08 000000136 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:55:45.815 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:45.816 -08 000000136 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:55:45.816 -08 000000136 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-03-02 12:55:45.876 -08 000000117 INF: FPGA: Recv TDIYARM2
17-03-02 12:55:45.876 -08 000000136 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:55:45.877 -08 000000136 INF: ===================TDI Scan Setup===================
17-03-02 12:55:45.879 -08 000000136 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:55:45.879 -08 000000136 INF: ===================TDI Scan Setup===================
17-03-02 12:55:45.881 -08 000000136 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-03-02 12:55:45.881 -08 000000136 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:55:45.882 -08 000000136 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:55:46.065 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:46.125 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:46.251 -08 000000136 INF: Camera #0 AttachBuffer (imageDataPtr = 69126516224 imgPtr = 69126516224 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-03-02 12:55:46.251 -08 000000136 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-03-02 12:55:46.251 -08 000000136 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:55:46.266 -08 000000136 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:55:46.268 -08 000000136 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:55:46.377 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:46.437 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:46.646 -08 000000136 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53833692544 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-03-02 12:55:46.646 -08 000000136 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-03-02 12:55:46.646 -08 000000136 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:55:46.661 -08 000000136 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:55:46.662 -08 000000136 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-03-02 12:55:46.664 -08 000000136 INF: ===================TDI Scan Setup===================
17-03-02 12:55:46.665 -08 000000136 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:55:46.666 -08 000000136 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:55:46.666 -08 000000136 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:55:46.668 -08 000000136 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:55:46.668 -08 000000136 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:55:46.668 -08 000000136 INF: Z Motor: Arming to move to -0.0100 mm
17-03-02 12:55:46.668 -08 000000136 INF: FPGA: Xmit ZYT 0 2\n
17-03-02 12:55:46.686 -08 000000030 INF: FPGA: Recv ZYT 
17-03-02 12:55:46.686 -08 000000136 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-03-02 12:55:46.686 -08 000000136 INF: FPGA: Xmit ZARM 2621\n
17-03-02 12:55:46.687 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:46.748 -08 000000060 INF: FPGA: Recv ZARM
17-03-02 12:55:46.748 -08 000000136 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9086 ms
17-03-02 12:55:46.748 -08 000000136 INF: Z Motor: ArmAbsStepped took 80.0562 ms
17-03-02 12:55:46.748 -08 000000136 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:55:46.749 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:46.750 -08 000000136 INF: ===================TDI Scan Setup===================
17-03-02 12:55:46.751 -08 000000136 INF: ======================================
17-03-02 12:55:46.752 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:55:46.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:46.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:55:46.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:55:46.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:55:46.755 -08 000000115 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:55:46.755 -08 000000115 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:55:46.755 -08 000000115 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:55:46.755 -08 000000115 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:55:46.755 -08 000000115 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:55:46.755 -08 000000107 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:55:46.756 -08 000000107 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:55:46.756 -08 000000107 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:55:46.756 -08 000000107 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:55:46.756 -08 000000107 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:55:46.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:47.063 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:47.123 -08 000000138 INF: FPGA: Recv EX2MV
17-03-02 12:55:47.123 -08 000000138 INF: FPGA: Recv EX1MV
17-03-02 12:55:47.123 -08 000000115 INF: Excitation Filter 2: Moved -107 steps in 367.6842 ms
17-03-02 12:55:47.123 -08 000000107 INF: Excitation Filter 1: Moved -107 steps in 367.2002 ms
17-03-02 12:55:47.123 -08 000000107 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.3313 ms
17-03-02 12:55:47.123 -08 000000107 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.4021 ms
17-03-02 12:55:47.123 -08 000000115 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.7803 ms
17-03-02 12:55:47.123 -08 000000115 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.1548 ms
17-03-02 12:55:47.123 -08 000000107 INF: ======================================
17-03-02 12:55:47.123 -08 000000115 INF: ======================================
17-03-02 12:55:47.125 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:55:47.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:55:47.127 -08 000000045 INF: ===================Serial===================
17-03-02 12:55:47.127 -08 000000004 INF: ===================Camera TDI===================
17-03-02 12:55:47.127 -08 000000062 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:55:47.127 -08 000000030 INF: ===================Move Y Motor without settling===================
17-03-02 12:55:47.127 -08 000000030 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5334 mm
17-03-02 12:55:47.127 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:55:47.127 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:55:47.128 -08 000000045 INF: ===================Serial, FPGA Z Wait===================
17-03-02 12:55:47.128 -08 000000004 INF: ===================Camera TDI, Parallel===================
17-03-02 12:55:47.128 -08 000000045 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:55:47.128 -08 000000062 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:55:47.129 -08 000000116 INF: ===================Camera TDI===================
17-03-02 12:55:47.129 -08 000000111 INF: ===================Camera TDI===================
17-03-02 12:55:47.129 -08 000000062 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:55:47.129 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:47.130 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:47.130 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:47.130 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:47.187 -08 000000030 INF: Y Motor: Recv ok\r
17-03-02 12:55:47.187 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:55:47.187 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:55:47.252 -08 000000030 INF: Y Motor: Recv ok\r
17-03-02 12:55:47.252 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:47.280 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:47.280 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:47.280 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:47.280 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:47.313 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:47.314 -08 000000030 INF: Y Motor: Recv v 0\r
17-03-02 12:55:47.314 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:55:47.314 -08 000000030 INF: Y Motor: Set target position to 5797042 encoder counts
17-03-02 12:55:47.314 -08 000000030 INF: Y Motor: Xmit s r0xca 5797042\r
17-03-02 12:55:47.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:47.377 -08 000000030 INF: Y Motor: Recv ok\r
17-03-02 12:55:47.377 -08 000000030 INF: Y Motor: Start the move command
17-03-02 12:55:47.377 -08 000000030 INF: Y Motor: Xmit t 1\r
17-03-02 12:55:47.430 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:47.430 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:47.430 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:47.430 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:47.437 -08 000000030 INF: Y Motor: Recv ok\r
17-03-02 12:55:47.437 -08 000000030 INF: Y Motor: WaitUntilStopped 61042
17-03-02 12:55:47.437 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:47.562 -08 000000030 INF: Y Motor: Unshifted Position: 5935634
17-03-02 12:55:47.580 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:47.580 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:47.580 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:47.580 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:47.612 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:47.625 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:47.687 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:47.730 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-03-02 12:55:47.730 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-03-02 12:55:47.730 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-03-02 12:55:47.730 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-03-02 12:55:47.730 -08 000000111 INF: ===================Camera #2 Frame #1===================
17-03-02 12:55:47.730 -08 000000116 INF: ===================Camera #0 Frame #1===================
17-03-02 12:55:47.739 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:47.875 -08 000000030 INF: Y Motor: Unshifted Position: 5888629
17-03-02 12:55:47.883 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-03-02 12:55:47.883 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-03-02 12:55:47.883 -08 000000116 INF: ===================Camera #0 Frame #2===================
17-03-02 12:55:47.884 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-03-02 12:55:47.884 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-03-02 12:55:47.884 -08 000000111 INF: ===================Camera #2 Frame #3===================
17-03-02 12:55:47.925 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:47.937 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:48.000 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:48.036 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:55:48.036 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:55:48.036 -08 000000116 INF: ===================Camera #0 Frame #4===================
17-03-02 12:55:48.041 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:55:48.041 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:55:48.041 -08 000000111 INF: ===================Camera #2 Frame #4===================
17-03-02 12:55:48.051 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:48.186 -08 000000030 INF: Y Motor: Unshifted Position: 5841620
17-03-02 12:55:48.192 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:55:48.192 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:55:48.192 -08 000000116 INF: ===================Camera #0 Frame #5===================
17-03-02 12:55:48.194 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:55:48.194 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:55:48.194 -08 000000111 INF: ===================Camera #2 Frame #5===================
17-03-02 12:55:48.236 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:48.246 -08 000000132 INF: FPGA: Recv ZWAIT 
17-03-02 12:55:48.246 -08 000000132 INF: FPGA: Recv TDIYWAIT
17-03-02 12:55:48.246 -08 000000062 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:55:48.246 -08 000000045 INF: ===================Serial===================
17-03-02 12:55:48.248 -08 000000062 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:55:48.248 -08 000000045 INF: ===================Serial, Confirm position Z Motor===================
17-03-02 12:55:48.248 -08 000000045 INF: ===================Serial===================
17-03-02 12:55:48.249 -08 000000068 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:55:48.249 -08 000000075 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:55:48.249 -08 000000068 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:55:48.249 -08 000000068 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:55:48.249 -08 000000068 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:55:48.249 -08 000000068 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:55:48.249 -08 000000075 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:55:48.249 -08 000000075 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:55:48.249 -08 000000075 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:55:48.250 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:48.250 -08 000000045 INF: ======================================
17-03-02 12:55:48.252 -08 000000075 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:55:48.309 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:48.345 -08 000000116 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-03-02 12:55:48.345 -08 000000116 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-03-02 12:55:48.345 -08 000000116 INF: ===================Camera #0 Frame #6===================
17-03-02 12:55:48.347 -08 000000111 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-03-02 12:55:48.347 -08 000000111 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-03-02 12:55:48.347 -08 000000111 INF: ===================Camera #2 Frame #6===================
17-03-02 12:55:48.348 -08 000000116 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-03-02 12:55:48.349 -08 000000116 INF: ===================CameraTDI Cleanup===================
17-03-02 12:55:48.350 -08 000000111 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-03-02 12:55:48.351 -08 000000111 INF: ===================CameraTDI Cleanup===================
17-03-02 12:55:48.360 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:48.373 -08 000000116 INF: Camera #0 ReleaseBuffer
17-03-02 12:55:48.373 -08 000000116 INF: ===================Camera TDI===================
17-03-02 12:55:48.374 -08 000000116 INF: ======================================
17-03-02 12:55:48.397 -08 000000111 INF: Camera #2 ReleaseBuffer
17-03-02 12:55:48.397 -08 000000111 INF: ===================Camera TDI===================
17-03-02 12:55:48.398 -08 000000111 INF: ======================================
17-03-02 12:55:48.400 -08 000000004 INF: ===================Camera TDI===================
17-03-02 12:55:48.401 -08 000000004 INF: ======================================
17-03-02 12:55:48.499 -08 000000030 INF: Y Motor: Unshifted Position: 5797064
17-03-02 12:55:48.549 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:48.559 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:48.620 -08 000000096 INF: FPGA: Recv EX1MV
17-03-02 12:55:48.620 -08 000000096 INF: FPGA: Recv EX2MV
17-03-02 12:55:48.620 -08 000000075 INF: Excitation Filter 2: Moved 107 steps in 370.6263 ms
17-03-02 12:55:48.620 -08 000000075 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.7255 ms
17-03-02 12:55:48.620 -08 000000075 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.8106 ms
17-03-02 12:55:48.620 -08 000000068 INF: Excitation Filter 1: Moved 107 steps in 370.8399 ms
17-03-02 12:55:48.620 -08 000000068 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.041 ms
17-03-02 12:55:48.620 -08 000000068 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1125 ms
17-03-02 12:55:48.620 -08 000000075 INF: ======================================
17-03-02 12:55:48.620 -08 000000068 INF: ======================================
17-03-02 12:55:48.621 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:48.622 -08 000000062 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:55:48.623 -08 000000062 INF: ======================================
17-03-02 12:55:48.687 -08 000000030 INF: Y Motor: Unshifted Position: 5797042
17-03-02 12:55:48.687 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:55:48.687 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:48.747 -08 000000030 INF: Y Motor: Recv v 0\r
17-03-02 12:55:48.747 -08 000000030 INF: Y Motor: Moved to 62.9704 after 1310 ms
17-03-02 12:55:48.747 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:55:48.809 -08 000000030 INF: Y Motor: Recv v 4097\r
17-03-02 12:55:48.809 -08 000000030 INF: Y Motor: Status After move finished OK:
17-03-02 12:55:48.809 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:48.871 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:48.874 -08 000000030 INF: Y Motor: Recv v 0\r
17-03-02 12:55:48.874 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:55:48.874 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:55:48.935 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:48.936 -08 000000030 INF: Y Motor: Recv v 134217728\r
17-03-02 12:55:48.936 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:55:48.936 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:55:48.936 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:55:48.998 -08 000000030 INF: Y Motor: Recv v 0\r
17-03-02 12:55:48.998 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:55:48.998 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:55:48.998 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:55:49.060 -08 000000030 INF: Y Motor: Recv ok\r
17-03-02 12:55:49.060 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:55:49.060 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:55:49.122 -08 000000030 INF: Y Motor: Recv ok\r
17-03-02 12:55:49.122 -08 000000030 INF: ======================================
17-03-02 12:55:49.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:55:49.124 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:55:49.125 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.125 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:55:49.184 -08 000000129 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:55:49.184 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:55:49.185 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:49.246 -08 000000138 INF: FPGA: Recv TDIYERD 6297044
17-03-02 12:55:49.246 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:55:49.247 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:49.309 -08 000000060 INF: FPGA: Recv ZADCR 2425
17-03-02 12:55:49.309 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-03-02 12:55:49.309 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:55:49.371 -08 000000058 INF: FPGA: Recv TDIPULSES 3073
17-03-02 12:55:49.371 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-03-02 12:55:49.371 -08 000000042 INF: TDIScan finished after 7493.2294 ms
17-03-02 12:55:49.371 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-03-02 12:55:49.371 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-03-02 12:55:49.371 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:55:49.433 -08 000000104 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:55:49.433 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.435 -08 000000105 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:55:49.435 -08 000000060 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:55:49.435 -08 000000111 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:55:49.435 -08 000000105 INF: ======================================
17-03-02 12:55:49.436 -08 000000111 INF: ======================================
17-03-02 12:55:49.436 -08 000000060 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:55:49.436 -08 000000060 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:55:49.496 -08 000000060 INF: Y Motor: Recv ok\r
17-03-02 12:55:49.496 -08 000000060 INF: ======================================
17-03-02 12:55:49.497 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:49.497 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:55:49.543 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.543 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:55:49.557 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:49.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:55:49.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:55:49.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:55:49.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:49.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:49.625 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, ETF: Extracting coords===================
17-03-02 12:55:49.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:49.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-03-02 12:55:49.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics===================
17-03-02 12:55:49.807 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:49.871 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:50.121 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:50.181 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:50.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-03-02 12:55:50.346 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.081605363887551Best Z position at top surface = -0.155120535374788Best Z position at top surface + compensator offset = -0.132420535374788 C:161,L:1,T
17-03-02 12:55:50.347 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.155120535374788
17-03-02 12:55:50.347 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.95347
17-03-02 12:55:50.347 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.081605363887551
17-03-02 12:55:50.347 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.5995
17-03-02 12:55:50.347 -08 000000042 INF: Z-height at LaneTopSurface is -0.155120535374788.
17-03-02 12:55:50.347 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:50.431 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:50.482 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:55:50.482 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:55:50.494 -08 000000044 INF: FPGA: Recv ZSTEP 
17-03-02 12:55:50.494 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-03-02 12:55:50.495 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:50.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:50.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:50.497 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:50.498 -08 000000054 INF: ===================Move Tilt Motor 1===================
17-03-02 12:55:50.498 -08 000000138 INF: ===================Move Tilt Motor 2===================
17-03-02 12:55:50.498 -08 000000112 INF: ===================Move Tilt Motor 3===================
17-03-02 12:55:50.498 -08 000000054 INF: Tilt Motor 1: Moving to 5.0701 mm, started at 5.0627 mm, delta = 0.0074 mm
17-03-02 12:55:50.498 -08 000000138 INF: Tilt Motor 2: Moving to 5.2799 mm, started at 5.2934 mm, delta = -0.0135 mm
17-03-02 12:55:50.498 -08 000000054 INF: FPGA: Xmit T1RD\n
17-03-02 12:55:50.498 -08 000000112 INF: Tilt Motor 3: Moving to 5.2250 mm, started at 5.2372 mm, delta = -0.0122 mm
17-03-02 12:55:50.499 -08 000000138 INF: FPGA: Xmit T2RD\n
17-03-02 12:55:50.501 -08 000000112 INF: FPGA: Xmit T3RD\n
17-03-02 12:55:50.556 -08 000000105 INF: FPGA: Recv T1RD 19931
17-03-02 12:55:50.556 -08 000000105 INF: FPGA: Recv T2RD 20840
17-03-02 12:55:50.556 -08 000000105 INF: FPGA: Recv T3RD 20618
17-03-02 12:55:50.556 -08 000000112 INF: Tilt Motor 3: Encoder: at motor step 3436 + 2/6
17-03-02 12:55:50.556 -08 000000112 INF: Tilt Motor 3: Moving to 20571 encoder counts
17-03-02 12:55:50.556 -08 000000112 INF: FPGA: Xmit T3MOVETO 20571\n
17-03-02 12:55:50.556 -08 000000054 INF: Tilt Motor 1: Encoder: at motor step 3321 + 5/6
17-03-02 12:55:50.556 -08 000000054 INF: Tilt Motor 1: Moving to 19961 encoder counts
17-03-02 12:55:50.557 -08 000000054 INF: FPGA: Xmit T1MOVETO 19961\n
17-03-02 12:55:50.557 -08 000000138 INF: Tilt Motor 2: Encoder: at motor step 3473 + 2/6
17-03-02 12:55:50.557 -08 000000138 INF: Tilt Motor 2: Moving to 20787 encoder counts
17-03-02 12:55:50.558 -08 000000138 INF: FPGA: Xmit T2MOVETO 20787\n
17-03-02 12:55:50.680 -08 000000118 INF: FPGA: Recv T1MOVETO 4
17-03-02 12:55:50.680 -08 000000118 INF: FPGA: Recv T3MOVETO 8
17-03-02 12:55:50.680 -08 000000118 INF: FPGA: Recv T2MOVETO 8
17-03-02 12:55:50.680 -08 000000138 INF: Tilt Motor 2: To move from 5.293 to 5.280 (-0.014 mm) should take 9 steps, but required 8 steps (0.012 mm). Slippage = -0.002 mm (0.11%)
17-03-02 12:55:50.680 -08 000000054 INF: Tilt Motor 1: To move from 5.062 to 5.070 (0.007 mm) should take 5 steps, but required 4 steps (0.006 mm). Slippage = -0.002 mm (-0.21%)
17-03-02 12:55:50.680 -08 000000112 INF: Tilt Motor 3: To move from 5.237 to 5.225 (-0.012 mm) should take 8 steps, but required 8 steps (0.012 mm). Slippage = 0.000 mm (0.00%)
17-03-02 12:55:50.680 -08 000000138 INF: FPGA: Xmit T2RD\n
17-03-02 12:55:50.681 -08 000000112 INF: FPGA: Xmit T3RD\n
17-03-02 12:55:50.683 -08 000000054 INF: FPGA: Xmit T1RD\n
17-03-02 12:55:50.744 -08 000000081 INF: FPGA: Recv T2RD 20792
17-03-02 12:55:50.744 -08 000000081 INF: FPGA: Recv T3RD 20571
17-03-02 12:55:50.744 -08 000000081 INF: FPGA: Recv T1RD 19955
17-03-02 12:55:50.744 -08 000000054 INF: Tilt Motor 1: Encoder: at motor step 3325 + 5/6
17-03-02 12:55:50.744 -08 000000112 INF: Tilt Motor 3: Encoder: at motor step 3428 + 3/6
17-03-02 12:55:50.744 -08 000000054 INF: FPGA: Xmit T1RD\n
17-03-02 12:55:50.744 -08 000000138 INF: Tilt Motor 2: Encoder: at motor step 3465 + 2/6
17-03-02 12:55:50.745 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:50.745 -08 000000138 INF: FPGA: Xmit T2RD\n
17-03-02 12:55:50.747 -08 000000112 INF: FPGA: Xmit T3RD\n
17-03-02 12:55:50.805 -08 000000117 INF: FPGA: Recv T1RD 19955
17-03-02 12:55:50.805 -08 000000117 INF: FPGA: Recv T2RD 20792
17-03-02 12:55:50.805 -08 000000117 INF: FPGA: Recv T3RD 20571
17-03-02 12:55:50.805 -08 000000138 INF: Tilt Motor 2: Encoder: at motor step 3465 + 2/6
17-03-02 12:55:50.805 -08 000000112 INF: Tilt Motor 3: Encoder: at motor step 3428 + 3/6
17-03-02 12:55:50.805 -08 000000138 INF: FPGA: Xmit T2RD\n
17-03-02 12:55:50.805 -08 000000054 INF: Tilt Motor 1: Encoder: at motor step 3325 + 5/6
17-03-02 12:55:50.806 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:50.806 -08 000000112 INF: FPGA: Xmit T3RD\n
17-03-02 12:55:50.808 -08 000000054 INF: FPGA: Xmit T1RD\n
17-03-02 12:55:50.867 -08 000000036 INF: FPGA: Recv T2RD 20792
17-03-02 12:55:50.867 -08 000000036 INF: FPGA: Recv T3RD 20571
17-03-02 12:55:50.867 -08 000000036 INF: FPGA: Recv T1RD 19955
17-03-02 12:55:50.867 -08 000000054 INF: Tilt Motor 1: Encoder: at motor step 3325 + 5/6
17-03-02 12:55:50.867 -08 000000112 INF: Tilt Motor 3: Encoder: at motor step 3428 + 3/6
17-03-02 12:55:50.867 -08 000000054 INF: Tilt Motor 1: After move to 5.0701, error = -0.0016, min/max error = -0.0017/0.0019, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:55:50.867 -08 000000112 INF: Tilt Motor 3: After move to 5.2250, error = 0.0000, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:55:50.867 -08 000000054 INF: Tilt Motor 1: Moved to 5.0686 after 369.3317 ms
17-03-02 12:55:50.867 -08 000000112 INF: Tilt Motor 3: Moved to 5.2250 after 369.1881 ms
17-03-02 12:55:50.867 -08 000000138 INF: Tilt Motor 2: Encoder: at motor step 3465 + 2/6
17-03-02 12:55:50.867 -08 000000138 INF: Tilt Motor 2: After move to 5.2799, error = 0.0013, min/max error = -0.0020/0.0017, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:55:50.867 -08 000000054 INF: ======================================
17-03-02 12:55:50.867 -08 000000138 INF: Tilt Motor 2: Moved to 5.2812 after 369.5473 ms
17-03-02 12:55:50.867 -08 000000112 INF: ======================================
17-03-02 12:55:50.868 -08 000000138 INF: ======================================
17-03-02 12:55:50.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:50.869 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:50.870 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.07012470731835, m2=5.27985537096023, m3=5.22499137096023
17-03-02 12:55:50.870 -08 000000042 INF: ETF Best Z: -0.1324205 mm (34713 DAC)
17-03-02 12:55:50.870 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:50.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:50.871 -08 000000042 INF: Compensator: Moving IntoPath
17-03-02 12:55:50.871 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-03-02 12:55:51.056 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:51.088 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:51.339 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:51.400 -08 000000068 INF: FPGA: Recv MIOCOMPF
17-03-02 12:55:51.400 -08 000000042 INF: Compensator: Moved IntoPath in 528 ms
17-03-02 12:55:51.401 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:51.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:51.402 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:55:51.410 -08 000000042 INF: Swath 1 position calculated to be: {X=68.63164, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface
17-03-02 12:55:51.410 -08 000000042 INF: Swath 2 position calculated to be: {X=69.73964, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface
17-03-02 12:55:51.416 -08 000000042 INF: Swath 0: Converted transform from (-100.0884, 49.7952) pixels to (-0.0345, 0.01725) mm.
17-03-02 12:55:51.423 -08 000000042 INF: Swath 1: Converted transform from (-121.5193, 47.05665) pixels to (-0.04209, 0.016215) mm.
17-03-02 12:55:51.423 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-03-02 12:55:51.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-03-02 12:55:51.424 -08 000000042 INF: Transformed XStagePosition from 68.63164 mm to 68.5971375741065 mm.
17-03-02 12:55:51.436 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5703393550366 mm.
17-03-02 12:55:51.437 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3703393550366 mm.
17-03-02 12:55:51.437 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4610893550366 mm.
17-03-02 12:55:51.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:55:51.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-03-02 12:55:51.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:55:51.439 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1
17-03-02 12:55:51.446 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:55:51.446 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:55:51.447 -08 000000092 INF: ===================MoveEmissionFilters===================
17-03-02 12:55:51.447 -08 000000138 INF: ===================Move X,Y===================
17-03-02 12:55:51.447 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:55:51.448 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-03-02 12:55:51.448 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:55:51.448 -08 000000129 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:55:51.448 -08 000000122 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:55:51.448 -08 000000060 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:55:51.448 -08 000000138 INF: ===================Move X,Y, Parallel===================
17-03-02 12:55:51.448 -08 000000060 INF: Z Motor: Moving to -0.1524 mm, started at -0.0100 mm
17-03-02 12:55:51.449 -08 000000060 INF: FPGA: Xmit ZTRG 0\n
17-03-02 12:55:51.449 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:55:51.449 -08 000000129 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:55:51.449 -08 000000122 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:55:51.449 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:55:51.449 -08 000000030 INF: ===================Move X Motor without settling===================
17-03-02 12:55:51.449 -08 000000096 INF: ===================Move Y Motor without settling===================
17-03-02 12:55:51.449 -08 000000096 INF: Y Motor: Moving to 64.5703 mm @25.000 mm/sec, started at 62.9704 mm
17-03-02 12:55:51.450 -08 000000096 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:55:51.450 -08 000000096 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:55:51.450 -08 000000030 INF: X Motor: Xmit PR VM\n
17-03-02 12:55:51.450 -08 000000044 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:55:51.450 -08 000000009 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:55:51.450 -08 000000036 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:55:51.450 -08 000000051 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:55:51.450 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:55:51.450 -08 000000135 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:55:51.450 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:55:51.450 -08 000000062 INF: ======================================
17-03-02 12:55:51.451 -08 000000044 INF: ======================================
17-03-02 12:55:51.451 -08 000000036 INF: ======================================
17-03-02 12:55:51.451 -08 000000009 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:55:51.451 -08 000000051 INF: ======================================
17-03-02 12:55:51.451 -08 000000132 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:55:51.451 -08 000000009 INF: ======================================
17-03-02 12:55:51.452 -08 000000083 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:55:51.452 -08 000000132 INF: ======================================
17-03-02 12:55:51.452 -08 000000129 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:55:51.452 -08 000000083 INF: ======================================
17-03-02 12:55:51.453 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:55:51.453 -08 000000135 INF: ======================================
17-03-02 12:55:51.453 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:55:51.454 -08 000000070 INF: ======================================
17-03-02 12:55:51.454 -08 000000122 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:55:51.455 -08 000000075 INF: ======================================
17-03-02 12:55:51.456 -08 000000122 INF: ======================================
17-03-02 12:55:51.456 -08 000000129 INF: ======================================
17-03-02 12:55:51.457 -08 000000092 INF: ======================================
17-03-02 12:55:51.462 -08 000000110 INF: FPGA: Recv ZTRG 
17-03-02 12:55:51.462 -08 000000060 INF: FPGA: Xmit ZYT 0 3\n
17-03-02 12:55:51.524 -08 000000088 INF: FPGA: Recv ZYT 
17-03-02 12:55:51.524 -08 000000060 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-03-02 12:55:51.524 -08 000000060 INF: FPGA: Xmit ZMV 39956\n
17-03-02 12:55:51.526 -08 000000096 INF: Y Motor: Recv ok\r
17-03-02 12:55:51.526 -08 000000096 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:55:51.526 -08 000000096 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:55:51.526 -08 000000030 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:55:51.526 -08 000000030 INF: X Motor: Xmit PR VI\n
17-03-02 12:55:51.587 -08 000000028 INF: FPGA: Recv @LOG Trigger Camera
17-03-02 12:55:51.587 -08 000000006 INF: FPGA: Trigger Camera
17-03-02 12:55:51.588 -08 000000030 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:55:51.588 -08 000000030 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:55:51.588 -08 000000030 INF: X Motor: Moving to 68.5971 mm @15.000 mm/sec, started at 69.1855 mm
17-03-02 12:55:51.588 -08 000000030 INF: X Motor: Xmit MA 3931\n
17-03-02 12:55:51.590 -08 000000096 INF: Y Motor: Recv ok\r
17-03-02 12:55:51.590 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:51.650 -08 000000096 INF: Y Motor: Recv v 0\r
17-03-02 12:55:51.650 -08 000000030 INF: X Motor: Recv MA 3931\r\n>
17-03-02 12:55:51.650 -08 000000096 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:55:51.650 -08 000000030 INF: X Motor: WaitUntilStopped 60039
17-03-02 12:55:51.650 -08 000000096 INF: Y Motor: Set target position to 5957034 encoder counts
17-03-02 12:55:51.650 -08 000000096 INF: Y Motor: Xmit s r0xca 5957034\r
17-03-02 12:55:51.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:51.710 -08 000000098 INF: FPGA: Recv ZMV 
17-03-02 12:55:51.710 -08 000000060 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.9849 ms
17-03-02 12:55:51.710 -08 000000060 INF: FPGA: Xmit ZDACR\n
17-03-02 12:55:51.711 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:51.712 -08 000000096 INF: Y Motor: Recv ok\r
17-03-02 12:55:51.712 -08 000000096 INF: Y Motor: Start the move command
17-03-02 12:55:51.712 -08 000000096 INF: Y Motor: Xmit t 1\r
17-03-02 12:55:51.772 -08 000000050 INF: FPGA: Recv ZDACR 39956
17-03-02 12:55:51.772 -08 000000060 INF: Z Motor: MoveAndTrigger took 323.6856 ms w/comms
17-03-02 12:55:51.772 -08 000000060 INF: Z Motor: After move to -0.1524, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:55:51.772 -08 000000060 INF: Z Motor: MoveAbsStepped took 323.8358 ms
17-03-02 12:55:51.772 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:55:51.774 -08 000000096 INF: Y Motor: Recv ok\r
17-03-02 12:55:51.774 -08 000000096 INF: Y Motor: WaitUntilStopped 60064
17-03-02 12:55:51.774 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:51.774 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-03-02 12:55:51.775 -08 000000133 INF: ===================Camera Arm TDI===================
17-03-02 12:55:51.775 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:55:51.776 -08 000000133 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:55:51.776 -08 000000071 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:55:51.776 -08 000000133 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:55:51.776 -08 000000071 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:55:51.777 -08 000000071 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:55:51.777 -08 000000071 INF: FPGA: Xmit ZSEL 3\n
17-03-02 12:55:51.836 -08 000000078 INF: FPGA: Recv ZSEL 
17-03-02 12:55:51.837 -08 000000071 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:55:51.837 -08 000000071 INF: FPGA: Xmit TDIBB 1\n
17-03-02 12:55:51.898 -08 000000092 INF: FPGA: Recv TDIBB
17-03-02 12:55:51.898 -08 000000071 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:55:51.899 -08 000000071 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:55:51.900 -08 000000096 INF: Y Motor: Unshifted Position: 5881037
17-03-02 12:55:51.900 -08 000000071 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:55:51.901 -08 000000071 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-03-02 12:55:51.902 -08 000000071 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-03-02 12:55:51.902 -08 000000071 INF: FPGA: Xmit ZSTEP 1792263\n
17-03-02 12:55:51.950 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:51.960 -08 000000009 INF: FPGA: Recv ZSTEP 
17-03-02 12:55:51.960 -08 000000071 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:55:51.961 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:51.962 -08 000000071 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:55:51.962 -08 000000071 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:55:51.964 -08 000000071 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:55:51.964 -08 000000071 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:55:51.964 -08 000000071 INF: Z Motor: Arming to move to -0.1124 mm
17-03-02 12:55:51.964 -08 000000071 INF: FPGA: Xmit ZYT 6437034 4\n
17-03-02 12:55:52.024 -08 000000111 INF: FPGA: Recv ZYT 
17-03-02 12:55:52.024 -08 000000071 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381037 enc / 63.810 mm / ) = 6437034 enc / 64.370 mm
17-03-02 12:55:52.024 -08 000000071 INF: FPGA: Xmit ZARM 29470\n
17-03-02 12:55:52.025 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:52.076 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:52.086 -08 000000117 INF: FPGA: Recv ZARM
17-03-02 12:55:52.086 -08 000000071 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9401 ms
17-03-02 12:55:52.086 -08 000000071 INF: Z Motor: ArmAbsStepped took 121.8684 ms
17-03-02 12:55:52.086 -08 000000071 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:55:52.087 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:55:52.088 -08 000000030 INF: X Motor: Xmit PR ER\n
17-03-02 12:55:52.089 -08 000000071 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:55:52.089 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:55:52.091 -08 000000071 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:55:52.091 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:55:52.093 -08 000000071 INF: ======================================
17-03-02 12:55:52.150 -08 000000030 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:55:52.150 -08 000000030 INF: X Motor: Moved to 68.5972 after 500 ms
17-03-02 12:55:52.150 -08 000000030 INF: ======================================
17-03-02 12:55:52.213 -08 000000096 INF: Y Motor: Unshifted Position: 5957035
17-03-02 12:55:52.213 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:55:52.213 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:52.275 -08 000000096 INF: Y Motor: Recv v 0\r
17-03-02 12:55:52.275 -08 000000096 INF: Y Motor: Moved to 64.5704 after 501 ms
17-03-02 12:55:52.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:52.275 -08 000000096 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:55:52.336 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:52.337 -08 000000096 INF: Y Motor: Recv v 4096\r
17-03-02 12:55:52.337 -08 000000096 INF: Y Motor: Status After move finished OK:
17-03-02 12:55:52.337 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:52.399 -08 000000096 INF: Y Motor: Recv v 0\r
17-03-02 12:55:52.399 -08 000000096 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:55:52.399 -08 000000096 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:55:52.463 -08 000000096 INF: Y Motor: Recv v 402653184\r
17-03-02 12:55:52.463 -08 000000096 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:55:52.463 -08 000000096 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:55:52.463 -08 000000096 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:55:52.525 -08 000000096 INF: Y Motor: Recv v 0\r
17-03-02 12:55:52.525 -08 000000096 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:55:52.525 -08 000000096 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:55:52.525 -08 000000096 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:55:52.585 -08 000000096 INF: Y Motor: Recv ok\r
17-03-02 12:55:52.585 -08 000000096 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:55:52.585 -08 000000096 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:55:52.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:52.649 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:52.650 -08 000000096 INF: Y Motor: Recv ok\r
17-03-02 12:55:52.650 -08 000000096 INF: ======================================
17-03-02 12:55:52.651 -08 000000138 INF: ===================Move X,Y===================
17-03-02 12:55:52.652 -08 000000138 INF: ======================================
17-03-02 12:55:52.899 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:52.960 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:52.971 -08 000000133 INF: Camera #0 AttachBuffer (imageDataPtr = 56929226800 imgPtr = 56929226800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:55:52.971 -08 000000133 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:55:52.971 -08 000000133 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:55:52.986 -08 000000133 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:55:52.988 -08 000000133 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:55:53.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:53.273 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:53.523 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:53.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:53.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:53.895 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:54.145 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:54.209 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:54.454 -08 000000133 INF: Camera #2 AttachBuffer (imageDataPtr = 64223121456 imgPtr = 65129091120 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:55:54.454 -08 000000133 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:55:54.454 -08 000000133 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:55:54.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:54.469 -08 000000133 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:55:54.471 -08 000000133 INF: ===================Camera Arm TDI===================
17-03-02 12:55:54.472 -08 000000133 INF: ======================================
17-03-02 12:55:54.473 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:55:54.474 -08 000000060 INF: ======================================
17-03-02 12:55:54.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:55:54.476 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:55:54.476 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-03-02 12:55:54.476 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-03-02 12:55:54.520 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:54.521 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:55:54.521 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-03-02 12:55:54.581 -08 000000118 INF: FPGA: Recv ZFREQCL
17-03-02 12:55:54.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:55:54.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:55:54.581 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:55:54.642 -08 000000100 INF: FPGA: Recv TDIYERD 6457035
17-03-02 12:55:54.642 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457035 counts (64.570 mm)
17-03-02 12:55:54.642 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:55:54.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:55:54.644 -08 000000054 INF: ===================TDI FPGA Arm===================
17-03-02 12:55:54.644 -08 000000105 INF: ===================Set YMotor gains for scans===================
17-03-02 12:55:54.644 -08 000000105 INF: ======================================
17-03-02 12:55:54.644 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:55:54.645 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:55:54.645 -08 000000054 INF: FPGA: Xmit TDIYPOS 6346109\n
17-03-02 12:55:54.707 -08 000000117 INF: FPGA: Recv TDIYPOS
17-03-02 12:55:54.707 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:55:54.708 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:55:54.709 -08 000000054 INF: FPGA: Xmit TDIYARM3 139264 6437034 1 1\n
17-03-02 12:55:54.767 -08 000000060 INF: FPGA: Recv TDIYARM3
17-03-02 12:55:54.767 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:55:54.768 -08 000000054 INF: ===================TDI FPGA Arm===================
17-03-02 12:55:54.769 -08 000000054 INF: ======================================
17-03-02 12:55:54.770 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:54.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:55:54.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:55:54.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:55:54.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:55:54.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:55:54.773 -08 000000105 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:55:54.773 -08 000000009 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:55:54.773 -08 000000105 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:55:54.773 -08 000000105 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:55:54.773 -08 000000009 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:55:54.773 -08 000000009 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:55:54.773 -08 000000009 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:55:54.773 -08 000000105 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:55:54.773 -08 000000009 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:55:54.777 -08 000000105 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:55:54.833 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:55.083 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:55.143 -08 000000036 INF: FPGA: Recv EX1MV
17-03-02 12:55:55.143 -08 000000036 INF: FPGA: Recv EX2MV
17-03-02 12:55:55.143 -08 000000105 INF: Excitation Filter 2: Moved -107 steps in 369.4599 ms
17-03-02 12:55:55.143 -08 000000105 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.553 ms
17-03-02 12:55:55.143 -08 000000105 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.6473 ms
17-03-02 12:55:55.143 -08 000000009 INF: Excitation Filter 1: Moved -107 steps in 369.4652 ms
17-03-02 12:55:55.143 -08 000000009 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.6579 ms
17-03-02 12:55:55.143 -08 000000009 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.7374 ms
17-03-02 12:55:55.143 -08 000000105 INF: ======================================
17-03-02 12:55:55.143 -08 000000009 INF: ======================================
17-03-02 12:55:55.144 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:55.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:55:55.145 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:55:55.146 -08 000000072 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:55:55.146 -08 000000110 INF: ===================Camera TDI===================
17-03-02 12:55:55.146 -08 000000112 INF: ===================FPGA Z Wait===================
17-03-02 12:55:55.146 -08 000000054 INF: ===================Move Y Motor without settling===================
17-03-02 12:55:55.146 -08 000000054 INF: Y Motor: Moving to 14.9220 mm @6.500 mm/sec, started at 64.5704 mm
17-03-02 12:55:55.147 -08 000000054 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:55:55.147 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:55:55.147 -08 000000112 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:55:55.147 -08 000000072 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:55:55.148 -08 000000072 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:55:55.148 -08 000000110 INF: ===================Camera TDI, Parallel===================
17-03-02 12:55:55.149 -08 000000115 INF: ===================Camera TDI===================
17-03-02 12:55:55.149 -08 000000051 INF: ===================Camera TDI===================
17-03-02 12:55:55.151 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:55.151 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:55.152 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:55.152 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:55.208 -08 000000054 INF: Y Motor: Recv ok\r
17-03-02 12:55:55.208 -08 000000054 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:55:55.208 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:55:55.268 -08 000000054 INF: Y Motor: Recv ok\r
17-03-02 12:55:55.268 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:55:55.302 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:55.302 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:55.302 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:55.302 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:55.332 -08 000000054 INF: Y Motor: Recv v 0\r
17-03-02 12:55:55.332 -08 000000054 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:55:55.332 -08 000000054 INF: Y Motor: Set target position to 992200 encoder counts
17-03-02 12:55:55.332 -08 000000054 INF: Y Motor: Xmit s r0xca 992200\r
17-03-02 12:55:55.394 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:55.394 -08 000000054 INF: Y Motor: Recv ok\r
17-03-02 12:55:55.394 -08 000000054 INF: Y Motor: Start the move command
17-03-02 12:55:55.394 -08 000000054 INF: Y Motor: Xmit t 1\r
17-03-02 12:55:55.452 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:55.452 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:55:55.452 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:55.452 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:55:55.455 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:55.456 -08 000000054 INF: Y Motor: Recv ok\r
17-03-02 12:55:55.456 -08 000000054 INF: Y Motor: WaitUntilStopped 67638
17-03-02 12:55:55.456 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:55.519 -08 000000117 INF: FPGA: Recv ZWAIT 
17-03-02 12:55:55.519 -08 000000112 INF: ======================================
17-03-02 12:55:55.580 -08 000000054 INF: Y Motor: Unshifted Position: 5893234
17-03-02 12:55:55.602 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:55:55.602 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:55:55.602 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:55:55.602 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:55:55.602 -08 000000051 INF: ===================Camera #2 Frame #5===================
17-03-02 12:55:55.602 -08 000000115 INF: ===================Camera #0 Frame #5===================
17-03-02 12:55:55.630 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:55.705 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:55.756 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:55.767 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:55:55.767 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:55:55.767 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:55:55.767 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:55:55.767 -08 000000051 INF: ===================Camera #2 Frame #11===================
17-03-02 12:55:55.767 -08 000000115 INF: ===================Camera #0 Frame #11===================
17-03-02 12:55:55.769 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:55.894 -08 000000054 INF: Y Motor: Unshifted Position: 5690223
17-03-02 12:55:55.935 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:55:55.935 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:55:55.935 -08 000000115 INF: ===================Camera #0 Frame #17===================
17-03-02 12:55:55.936 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:55:55.936 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:55:55.936 -08 000000051 INF: ===================Camera #2 Frame #17===================
17-03-02 12:55:55.944 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:56.019 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:56.068 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:56.079 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:56.103 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:55:56.103 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:55:56.103 -08 000000115 INF: ===================Camera #0 Frame #23===================
17-03-02 12:55:56.105 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:55:56.105 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:55:56.105 -08 000000051 INF: ===================Camera #2 Frame #23===================
17-03-02 12:55:56.206 -08 000000054 INF: Y Motor: Unshifted Position: 5489376
17-03-02 12:55:56.256 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:56.271 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:55:56.271 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:55:56.271 -08 000000115 INF: ===================Camera #0 Frame #29===================
17-03-02 12:55:56.274 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:55:56.274 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:55:56.274 -08 000000051 INF: ===================Camera #2 Frame #29===================
17-03-02 12:55:56.329 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:56.382 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:56.393 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:55:56.439 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-03-02 12:55:56.439 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-03-02 12:55:56.439 -08 000000115 INF: ===================Camera #0 Frame #35===================
17-03-02 12:55:56.443 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:55:56.443 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:55:56.443 -08 000000051 INF: ===================Camera #2 Frame #36===================
17-03-02 12:55:56.518 -08 000000054 INF: Y Motor: Unshifted Position: 5285267
17-03-02 12:55:56.568 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:56.607 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:55:56.607 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:55:56.607 -08 000000115 INF: ===================Camera #0 Frame #42===================
17-03-02 12:55:56.615 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:55:56.615 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:55:56.615 -08 000000051 INF: ===================Camera #2 Frame #42===================
17-03-02 12:55:56.643 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:55:56.692 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:56.703 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:55:56.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:55:56.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:55:56.704 -08 000000018 INF: WaitCommand(5000) start
17-03-02 12:55:56.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Delay 5 of 5 seconds left===================
17-03-02 12:55:56.779 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:55:56.779 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:55:56.779 -08 000000115 INF: ===================Camera #0 Frame #48===================
17-03-02 12:55:56.784 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:55:56.784 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:55:56.784 -08 000000051 INF: ===================Camera #2 Frame #48===================
17-03-02 12:55:56.828 -08 000000054 INF: Y Motor: Unshifted Position: 5083548
17-03-02 12:55:56.878 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:56.947 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:55:56.947 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:55:56.947 -08 000000115 INF: ===================Camera #0 Frame #54===================
17-03-02 12:55:56.953 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:55:56.953 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:55:56.953 -08 000000051 INF: ===================Camera #2 Frame #54===================
17-03-02 12:55:57.005 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:57.116 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-03-02 12:55:57.116 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-03-02 12:55:57.116 -08 000000115 INF: ===================Camera #0 Frame #60===================
17-03-02 12:55:57.122 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:55:57.122 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:55:57.122 -08 000000051 INF: ===================Camera #2 Frame #61===================
17-03-02 12:55:57.141 -08 000000054 INF: Y Motor: Unshifted Position: 4879877
17-03-02 12:55:57.191 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:57.284 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-03-02 12:55:57.284 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-03-02 12:55:57.284 -08 000000115 INF: ===================Camera #0 Frame #67===================
17-03-02 12:55:57.294 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-03-02 12:55:57.294 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-03-02 12:55:57.294 -08 000000051 INF: ===================Camera #2 Frame #67===================
17-03-02 12:55:57.315 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:57.454 -08 000000054 INF: Y Motor: Unshifted Position: 4676431
17-03-02 12:55:57.456 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:55:57.456 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:55:57.456 -08 000000115 INF: ===================Camera #0 Frame #73===================
17-03-02 12:55:57.463 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:55:57.463 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:55:57.463 -08 000000051 INF: ===================Camera #2 Frame #73===================
17-03-02 12:55:57.504 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:57.624 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-03-02 12:55:57.624 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-03-02 12:55:57.624 -08 000000115 INF: ===================Camera #0 Frame #79===================
17-03-02 12:55:57.630 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:57.632 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-03-02 12:55:57.632 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-03-02 12:55:57.632 -08 000000051 INF: ===================Camera #2 Frame #79===================
17-03-02 12:55:57.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:55:57.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Delay 4 of 5 seconds left===================
17-03-02 12:55:57.764 -08 000000054 INF: Y Motor: Unshifted Position: 4474922
17-03-02 12:55:57.793 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-03-02 12:55:57.793 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-03-02 12:55:57.793 -08 000000115 INF: ===================Camera #0 Frame #85===================
17-03-02 12:55:57.801 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-03-02 12:55:57.801 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-03-02 12:55:57.801 -08 000000051 INF: ===================Camera #2 Frame #86===================
17-03-02 12:55:57.814 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:57.941 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:57.962 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:55:57.962 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:55:57.962 -08 000000115 INF: ===================Camera #0 Frame #92===================
17-03-02 12:55:57.974 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:55:57.974 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:55:57.974 -08 000000051 INF: ===================Camera #2 Frame #92===================
17-03-02 12:55:58.077 -08 000000054 INF: Y Motor: Unshifted Position: 4271255
17-03-02 12:55:58.127 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:58.134 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:55:58.134 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:55:58.134 -08 000000115 INF: ===================Camera #0 Frame #98===================
17-03-02 12:55:58.143 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:55:58.143 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:55:58.143 -08 000000051 INF: ===================Camera #2 Frame #98===================
17-03-02 12:55:58.251 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:58.303 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-03-02 12:55:58.303 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-03-02 12:55:58.303 -08 000000115 INF: ===================Camera #0 Frame #104===================
17-03-02 12:55:58.312 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-03-02 12:55:58.312 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-03-02 12:55:58.312 -08 000000051 INF: ===================Camera #2 Frame #104===================
17-03-02 12:55:58.388 -08 000000054 INF: Y Motor: Unshifted Position: 4068453
17-03-02 12:55:58.438 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:58.472 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-03-02 12:55:58.472 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-03-02 12:55:58.472 -08 000000115 INF: ===================Camera #0 Frame #110===================
17-03-02 12:55:58.481 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-03-02 12:55:58.481 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-03-02 12:55:58.481 -08 000000051 INF: ===================Camera #2 Frame #111===================
17-03-02 12:55:58.563 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:58.641 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:55:58.641 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:55:58.641 -08 000000115 INF: ===================Camera #0 Frame #117===================
17-03-02 12:55:58.654 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:55:58.654 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:55:58.654 -08 000000051 INF: ===================Camera #2 Frame #117===================
17-03-02 12:55:58.702 -08 000000054 INF: Y Motor: Unshifted Position: 3864786
17-03-02 12:55:58.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:55:58.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Delay 3 of 5 seconds left===================
17-03-02 12:55:58.752 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:58.813 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-03-02 12:55:58.813 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-03-02 12:55:58.813 -08 000000115 INF: ===================Camera #0 Frame #123===================
17-03-02 12:55:58.823 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-03-02 12:55:58.823 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-03-02 12:55:58.823 -08 000000051 INF: ===================Camera #2 Frame #123===================
17-03-02 12:55:58.876 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:58.982 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-03-02 12:55:58.982 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-03-02 12:55:58.982 -08 000000115 INF: ===================Camera #0 Frame #129===================
17-03-02 12:55:58.993 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-03-02 12:55:58.993 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-03-02 12:55:58.993 -08 000000051 INF: ===================Camera #2 Frame #129===================
17-03-02 12:55:59.012 -08 000000054 INF: Y Motor: Unshifted Position: 3663069
17-03-02 12:55:59.062 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:59.151 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-03-02 12:55:59.151 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-03-02 12:55:59.151 -08 000000115 INF: ===================Camera #0 Frame #135===================
17-03-02 12:55:59.162 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-03-02 12:55:59.162 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-03-02 12:55:59.162 -08 000000051 INF: ===================Camera #2 Frame #136===================
17-03-02 12:55:59.187 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:59.320 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-03-02 12:55:59.320 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-03-02 12:55:59.320 -08 000000115 INF: ===================Camera #0 Frame #142===================
17-03-02 12:55:59.335 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-03-02 12:55:59.335 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-03-02 12:55:59.335 -08 000000051 INF: ===================Camera #2 Frame #142===================
17-03-02 12:55:59.345 -08 000000054 INF: Y Motor: Unshifted Position: 3458968
17-03-02 12:55:59.395 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:59.491 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-03-02 12:55:59.491 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-03-02 12:55:59.491 -08 000000115 INF: ===================Camera #0 Frame #148===================
17-03-02 12:55:59.504 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-03-02 12:55:59.504 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-03-02 12:55:59.504 -08 000000051 INF: ===================Camera #2 Frame #148===================
17-03-02 12:55:59.515 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:59.654 -08 000000054 INF: Y Motor: Unshifted Position: 3247500
17-03-02 12:55:59.661 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-03-02 12:55:59.661 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-03-02 12:55:59.661 -08 000000115 INF: ===================Camera #0 Frame #154===================
17-03-02 12:55:59.673 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-03-02 12:55:59.673 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-03-02 12:55:59.673 -08 000000051 INF: ===================Camera #2 Frame #155===================
17-03-02 12:55:59.704 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:59.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:55:59.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Delay 2 of 5 seconds left===================
17-03-02 12:55:59.828 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:55:59.831 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-03-02 12:55:59.831 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-03-02 12:55:59.831 -08 000000115 INF: ===================Camera #0 Frame #160===================
17-03-02 12:55:59.845 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-03-02 12:55:59.845 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-03-02 12:55:59.845 -08 000000051 INF: ===================Camera #2 Frame #161===================
17-03-02 12:55:59.964 -08 000000054 INF: Y Motor: Unshifted Position: 3044057
17-03-02 12:56:00.001 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-03-02 12:56:00.001 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-03-02 12:56:00.001 -08 000000115 INF: ===================Camera #0 Frame #167===================
17-03-02 12:56:00.014 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:00.015 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-03-02 12:56:00.015 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-03-02 12:56:00.015 -08 000000051 INF: ===================Camera #2 Frame #167===================
17-03-02 12:56:00.144 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:00.174 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-03-02 12:56:00.174 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-03-02 12:56:00.174 -08 000000115 INF: ===================Camera #0 Frame #173===================
17-03-02 12:56:00.185 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-03-02 12:56:00.185 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-03-02 12:56:00.185 -08 000000051 INF: ===================Camera #2 Frame #173===================
17-03-02 12:56:00.278 -08 000000054 INF: Y Motor: Unshifted Position: 2841692
17-03-02 12:56:00.328 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:00.344 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-03-02 12:56:00.344 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-03-02 12:56:00.344 -08 000000115 INF: ===================Camera #0 Frame #179===================
17-03-02 12:56:00.355 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-03-02 12:56:00.355 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-03-02 12:56:00.355 -08 000000051 INF: ===================Camera #2 Frame #180===================
17-03-02 12:56:00.454 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:00.515 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-03-02 12:56:00.515 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-03-02 12:56:00.515 -08 000000115 INF: ===================Camera #0 Frame #186===================
17-03-02 12:56:00.528 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-03-02 12:56:00.528 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-03-02 12:56:00.528 -08 000000051 INF: ===================Camera #2 Frame #186===================
17-03-02 12:56:00.590 -08 000000054 INF: Y Motor: Unshifted Position: 2638900
17-03-02 12:56:00.640 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:00.688 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-03-02 12:56:00.688 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-03-02 12:56:00.688 -08 000000115 INF: ===================Camera #0 Frame #192===================
17-03-02 12:56:00.698 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-03-02 12:56:00.698 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-03-02 12:56:00.698 -08 000000051 INF: ===================Camera #2 Frame #192===================
17-03-02 12:56:00.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:56:00.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Delay 1 of 5 seconds left===================
17-03-02 12:56:00.764 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:00.857 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-03-02 12:56:00.857 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-03-02 12:56:00.857 -08 000000115 INF: ===================Camera #0 Frame #198===================
17-03-02 12:56:00.867 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-03-02 12:56:00.867 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-03-02 12:56:00.867 -08 000000051 INF: ===================Camera #2 Frame #198===================
17-03-02 12:56:00.902 -08 000000054 INF: Y Motor: Unshifted Position: 2435450
17-03-02 12:56:00.952 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:01.026 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-03-02 12:56:01.026 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-03-02 12:56:01.026 -08 000000115 INF: ===================Camera #0 Frame #204===================
17-03-02 12:56:01.037 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-03-02 12:56:01.037 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-03-02 12:56:01.037 -08 000000051 INF: ===================Camera #2 Frame #205===================
17-03-02 12:56:01.078 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:01.196 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-03-02 12:56:01.196 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-03-02 12:56:01.196 -08 000000115 INF: ===================Camera #0 Frame #211===================
17-03-02 12:56:01.211 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-03-02 12:56:01.211 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-03-02 12:56:01.211 -08 000000051 INF: ===================Camera #2 Frame #211===================
17-03-02 12:56:01.214 -08 000000054 INF: Y Motor: Unshifted Position: 2233086
17-03-02 12:56:01.265 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:01.370 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-03-02 12:56:01.370 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-03-02 12:56:01.370 -08 000000115 INF: ===================Camera #0 Frame #217===================
17-03-02 12:56:01.383 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-03-02 12:56:01.383 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-03-02 12:56:01.383 -08 000000051 INF: ===================Camera #2 Frame #217===================
17-03-02 12:56:01.388 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:01.527 -08 000000054 INF: Y Motor: Unshifted Position: 2030069
17-03-02 12:56:01.540 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-03-02 12:56:01.540 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-03-02 12:56:01.540 -08 000000115 INF: ===================Camera #0 Frame #223===================
17-03-02 12:56:01.553 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-03-02 12:56:01.553 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-03-02 12:56:01.553 -08 000000051 INF: ===================Camera #2 Frame #224===================
17-03-02 12:56:01.577 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:01.701 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:01.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:56:01.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Delay 0 of 5 seconds left===================
17-03-02 12:56:01.706 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:56:01.706 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:56:01.706 -08 000000018 INF: WaitCommand(5000) end
17-03-02 12:56:01.706 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:56:01.710 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-03-02 12:56:01.710 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-03-02 12:56:01.710 -08 000000115 INF: ===================Camera #0 Frame #229===================
17-03-02 12:56:01.727 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-03-02 12:56:01.727 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-03-02 12:56:01.727 -08 000000051 INF: ===================Camera #2 Frame #230===================
17-03-02 12:56:01.804 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:56:01.836 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-03-02 12:56:01.836 -08 000000018 INF: Current Position of Pump is: 18240
17-03-02 12:56:01.839 -08 000000054 INF: Y Motor: Unshifted Position: 1826612
17-03-02 12:56:01.879 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-03-02 12:56:01.879 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-03-02 12:56:01.879 -08 000000115 INF: ===================Camera #0 Frame #236===================
17-03-02 12:56:01.889 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:01.898 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-03-02 12:56:01.898 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-03-02 12:56:01.898 -08 000000051 INF: ===================Camera #2 Frame #236===================
17-03-02 12:56:01.936 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:56:02.015 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:02.023 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-03-02 12:56:02.023 -08 000000018 INF: Current Position of Pump is: 18240
17-03-02 12:56:02.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Dispensing port PortC===================
17-03-02 12:56:02.052 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-03-02 12:56:02.052 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-03-02 12:56:02.052 -08 000000115 INF: ===================Camera #0 Frame #242===================
17-03-02 12:56:02.069 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-03-02 12:56:02.069 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-03-02 12:56:02.069 -08 000000051 INF: ===================Camera #2 Frame #243===================
17-03-02 12:56:02.123 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD18240R\r
17-03-02 12:56:02.151 -08 000000054 INF: Y Motor: Unshifted Position: 1624459
17-03-02 12:56:02.201 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:02.212 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:02.221 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-03-02 12:56:02.221 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-03-02 12:56:02.221 -08 000000115 INF: ===================Camera #0 Frame #248===================
17-03-02 12:56:02.243 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-03-02 12:56:02.243 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-03-02 12:56:02.243 -08 000000051 INF: ===================Camera #2 Frame #249===================
17-03-02 12:56:02.312 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:02.325 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:02.391 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-03-02 12:56:02.391 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-03-02 12:56:02.391 -08 000000115 INF: ===================Camera #0 Frame #255===================
17-03-02 12:56:02.397 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:02.414 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-03-02 12:56:02.414 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-03-02 12:56:02.414 -08 000000051 INF: ===================Camera #2 Frame #255===================
17-03-02 12:56:02.463 -08 000000054 INF: Y Motor: Unshifted Position: 1421439
17-03-02 12:56:02.513 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:02.562 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-03-02 12:56:02.562 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-03-02 12:56:02.562 -08 000000115 INF: ===================Camera #0 Frame #261===================
17-03-02 12:56:02.583 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-03-02 12:56:02.583 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-03-02 12:56:02.583 -08 000000051 INF: ===================Camera #2 Frame #262===================
17-03-02 12:56:02.637 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:02.647 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:02.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:02.732 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-03-02 12:56:02.732 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-03-02 12:56:02.732 -08 000000115 INF: ===================Camera #0 Frame #267===================
17-03-02 12:56:02.757 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-03-02 12:56:02.757 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-03-02 12:56:02.757 -08 000000051 INF: ===================Camera #2 Frame #268===================
17-03-02 12:56:02.774 -08 000000054 INF: Y Motor: Unshifted Position: 1216695
17-03-02 12:56:02.824 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:02.895 -08 000000133 INF: FPGA: Recv TDIYWAIT
17-03-02 12:56:02.895 -08 000000072 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:02.897 -08 000000072 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:56:02.898 -08 000000104 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:56:02.898 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:56:02.898 -08 000000104 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:56:02.898 -08 000000104 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:56:02.898 -08 000000104 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:56:02.898 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:56:02.898 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:56:02.898 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:56:02.898 -08 000000104 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:56:02.901 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:56:02.902 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:56:02.902 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:56:02.902 -08 000000115 INF: ===================Camera #0 Frame #272===================
17-03-02 12:56:02.919 -08 000000115 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:56:02.920 -08 000000115 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:02.947 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:02.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:03.023 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:03.085 -08 000000115 INF: Camera #0 ReleaseBuffer
17-03-02 12:56:03.085 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:56:03.085 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:56:03.085 -08 000000051 INF: ===================Camera #2 Frame #272===================
17-03-02 12:56:03.085 -08 000000115 INF: ===================Camera TDI===================
17-03-02 12:56:03.086 -08 000000054 INF: Y Motor: Unshifted Position: 1014325
17-03-02 12:56:03.099 -08 000000051 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:56:03.100 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:03.115 -08 000000115 INF: ======================================
17-03-02 12:56:03.136 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:03.270 -08 000000111 INF: FPGA: Recv EX1MV
17-03-02 12:56:03.270 -08 000000111 INF: FPGA: Recv EX2MV
17-03-02 12:56:03.270 -08 000000104 INF: Excitation Filter 1: Moved 107 steps in 371.7763 ms
17-03-02 12:56:03.270 -08 000000104 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8998 ms
17-03-02 12:56:03.270 -08 000000104 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9721 ms
17-03-02 12:56:03.270 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 371.6907 ms
17-03-02 12:56:03.270 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.1925 ms
17-03-02 12:56:03.270 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2724 ms
17-03-02 12:56:03.270 -08 000000104 INF: ======================================
17-03-02 12:56:03.271 -08 000000082 INF: ======================================
17-03-02 12:56:03.272 -08 000000054 INF: Y Motor: Unshifted Position: 992199
17-03-02 12:56:03.272 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:03.272 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:03.272 -08 000000072 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:03.273 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:03.273 -08 000000072 INF: ======================================
17-03-02 12:56:03.291 -08 000000051 INF: Camera #2 ReleaseBuffer
17-03-02 12:56:03.291 -08 000000051 INF: ===================Camera TDI===================
17-03-02 12:56:03.325 -08 000000051 INF: ======================================
17-03-02 12:56:03.326 -08 000000110 INF: ===================Camera TDI===================
17-03-02 12:56:03.328 -08 000000110 INF: ======================================
17-03-02 12:56:03.333 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:03.334 -08 000000054 INF: Y Motor: Recv v 0\r
17-03-02 12:56:03.334 -08 000000054 INF: Y Motor: Moved to 14.9220 after 7878 ms
17-03-02 12:56:03.334 -08 000000054 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:03.397 -08 000000054 INF: Y Motor: Recv v 4097\r
17-03-02 12:56:03.397 -08 000000054 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:03.397 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:03.459 -08 000000054 INF: Y Motor: Recv v 0\r
17-03-02 12:56:03.459 -08 000000054 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:03.459 -08 000000054 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:03.521 -08 000000054 INF: Y Motor: Recv v 134217728\r
17-03-02 12:56:03.521 -08 000000054 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:56:03.521 -08 000000054 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:03.521 -08 000000054 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:03.583 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:03.586 -08 000000054 INF: Y Motor: Recv v 0\r
17-03-02 12:56:03.586 -08 000000054 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:03.586 -08 000000054 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:03.586 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:03.647 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:03.648 -08 000000054 INF: Y Motor: Recv ok\r
17-03-02 12:56:03.648 -08 000000054 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:03.648 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:03.710 -08 000000054 INF: Y Motor: Recv ok\r
17-03-02 12:56:03.710 -08 000000054 INF: ======================================
17-03-02 12:56:03.711 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:03.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:03.713 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:03.713 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:56:03.770 -08 000000096 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:56:03.770 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:03.832 -08 000000009 INF: FPGA: Recv TDIYERD 1492201
17-03-02 12:56:03.832 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:56:03.894 -08 000000055 INF: FPGA: Recv ZADCR 31703
17-03-02 12:56:03.894 -08 000000042 INF: At scan end Y pos = 14.922 and Z pos = -0.121. Y moved -48.539 mm
17-03-02 12:56:03.894 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:56:03.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:03.956 -08 000000096 INF: FPGA: Recv TDIPULSES 139265
17-03-02 12:56:03.956 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-03-02 12:56:03.956 -08 000000042 INF: TDIScan finished after 12531.6441 ms
17-03-02 12:56:03.956 -08 000000042 INF: Image[0]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm)
17-03-02 12:56:03.956 -08 000000042 INF: Image[2]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm)
17-03-02 12:56:03.957 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:03.958 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:03.992 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.019 um
17-03-02 12:56:03.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:03.994 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:56:04.021 -08 000000009 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:56:04.021 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:04.022 -08 000000112 INF: ===================Dither Clean Up Command===================
17-03-02 12:56:04.022 -08 000000045 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:56:04.022 -08 000000062 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:56:04.022 -08 000000075 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:56:04.023 -08 000000045 INF: ======================================
17-03-02 12:56:04.023 -08 000000075 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:56:04.023 -08 000000075 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:56:04.023 -08 000000062 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:56:04.023 -08 000000062 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:56:04.023 -08 000000115 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:56:04.023 -08 000000044 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:04.024 -08 000000115 INF: FPGA: Xmit ZSEL 0\n
17-03-02 12:56:04.026 -08 000000044 INF: ===================LFT:Extracting coords===================
17-03-02 12:56:04.051 -08 000000044 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:04.052 -08 000000044 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-03-02 12:56:04.053 -08 000000081 INF: ===================LookupFocusTracking===================
17-03-02 12:56:04.053 -08 000000131 INF: ===================LookupFocusTracking===================
17-03-02 12:56:04.053 -08 000000078 INF: ===================LookupFocusTracking===================
17-03-02 12:56:04.053 -08 000000057 INF: ===================LookupFocusTracking===================
17-03-02 12:56:04.053 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:04.053 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:04.054 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:04.054 -08 000000131 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:04.083 -08 000000051 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:04.083 -08 000000051 INF: FPGA: Recv ZSEL 
17-03-02 12:56:04.083 -08 000000115 INF: FPGA: Xmit ZDACW 39956\n
17-03-02 12:56:04.085 -08 000000062 INF: Y Motor: Recv ok\r
17-03-02 12:56:04.085 -08 000000075 INF: ======================================
17-03-02 12:56:04.085 -08 000000062 INF: ======================================
17-03-02 12:56:04.128 -08 000000057 INF: FC:B, C:161,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:04.128 -08 000000081 INF: FC:B, C:161,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:04.128 -08 000000131 INF: FC:B, C:161,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:04.129 -08 000000078 INF: FC:B, C:161,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:04.145 -08 000000107 INF: FPGA: Recv ZDACW 
17-03-02 12:56:04.145 -08 000000115 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-03-02 12:56:04.146 -08 000000115 INF: FPGA: Xmit TDIBB 0\n
17-03-02 12:56:04.207 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:04.208 -08 000000116 INF: FPGA: Recv TDIBB
17-03-02 12:56:04.208 -08 000000115 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:56:04.209 -08 000000115 INF: ======================================
17-03-02 12:56:04.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:04.280 -08 000000057 INF: LFT found best fwhm score 2.206653 in 152 ms
17-03-02 12:56:04.280 -08 000000057 INF: LFT found good score at index 4609 with fwhm value 2.206653. Next cycle, cycle 162 starting Z position for top surface is at -0.152 mm FC:B, C:161,L:1,T
17-03-02 12:56:04.280 -08 000000131 INF: LFT found best fwhm score 2.000091 in 152 ms
17-03-02 12:56:04.280 -08 000000131 INF: LFT found good score at index 6401 with fwhm value 2.000091. Next cycle, cycle 162 starting Z position for top surface is at -0.152 mm FC:B, C:161,L:1,T
17-03-02 12:56:04.280 -08 000000081 INF: LFT found best fwhm score 2.015075 in 152 ms
17-03-02 12:56:04.280 -08 000000081 INF: LFT found good score at index 4569 with fwhm value 2.015075. Next cycle, cycle 162 starting Z position for top surface is at -0.152 mm FC:B, C:161,L:1,T
17-03-02 12:56:04.280 -08 000000131 INF: ===================LookupFocusTracking===================
17-03-02 12:56:04.280 -08 000000057 INF: ===================LookupFocusTracking===================
17-03-02 12:56:04.280 -08 000000081 INF: ===================LookupFocusTracking===================
17-03-02 12:56:04.280 -08 000000131 INF: ======================================
17-03-02 12:56:04.281 -08 000000057 INF: ======================================
17-03-02 12:56:04.281 -08 000000081 INF: ======================================
17-03-02 12:56:04.281 -08 000000078 INF: LFT found best fwhm score 2.018813 in 152 ms
17-03-02 12:56:04.281 -08 000000078 INF: LFT found good score at index 8997 with fwhm value 2.018813. Next cycle, cycle 162 starting Z position for top surface is at -0.151 mm FC:B, C:161,L:1,T
17-03-02 12:56:04.281 -08 000000078 INF: ===================LookupFocusTracking===================
17-03-02 12:56:04.282 -08 000000078 INF: ======================================
17-03-02 12:56:04.282 -08 000000044 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:04.283 -08 000000044 INF: LFT weighted average best Z for top surface is at -0.152mm FC:B, C:161,L:1,T
17-03-02 12:56:04.283 -08 000000044 INF: ======================================
17-03-02 12:56:04.285 -08 000000112 INF: ======================================
17-03-02 12:56:04.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:04.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:56:04.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:04.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:56:04.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:04.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:56:04.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:04.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:56:04.288 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:04.288 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-03-02 12:56:04.288 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-03-02 12:56:04.289 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Dispensing port PortC, Waiting for image analysis===================
17-03-02 12:56:04.289 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6), Dispensing port PortC===================
17-03-02 12:56:04.289 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Waiting for image analysis===================
17-03-02 12:56:04.290 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-03-02 12:56:04.313 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-03-02 12:56:04.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:56:04.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-03-02 12:56:04.313 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:04.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-03-02 12:56:04.314 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-03-02 12:56:04.314 -08 000000042 INF: Transformed XStagePosition from 69.73964 mm to 69.6975492835045 mm.
17-03-02 12:56:04.334 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5693043557704 mm.
17-03-02 12:56:04.334 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3693043557704 mm.
17-03-02 12:56:04.334 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4600543557703 mm.
17-03-02 12:56:04.342 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:04.343 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-03-02 12:56:04.343 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:04.343 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -152.4 um, section = A_1
17-03-02 12:56:04.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:04.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:04.456 -08 000000036 INF: ===================Move X,Y===================
17-03-02 12:56:04.457 -08 000000066 INF: ===================MoveEmissionFilters===================
17-03-02 12:56:04.457 -08 000000070 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:04.458 -08 000000070 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-03-02 12:56:04.458 -08 000000070 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:56:04.458 -08 000000036 INF: ===================Move X,Y, Parallel===================
17-03-02 12:56:04.459 -08 000000070 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:04.462 -08 000000070 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-03-02 12:56:04.462 -08 000000111 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:04.463 -08 000000078 INF: ===================Move X Motor without settling===================
17-03-02 12:56:04.463 -08 000000078 INF: X Motor: Xmit PR VM\n
17-03-02 12:56:04.464 -08 000000131 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:04.464 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:04.464 -08 000000111 INF: Y Motor: Moving to 64.5693 mm @25.000 mm/sec, started at 14.9220 mm
17-03-02 12:56:04.464 -08 000000111 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:04.464 -08 000000111 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:04.465 -08 000000110 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:04.465 -08 000000131 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:04.466 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:04.466 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1103 Request: {"Cycle":161,"Lane":1,"Tile":1103,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF237","HCSMMF195","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.466 -08 000000110 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:04.467 -08 000000061 INF: ===================Camera Arm TDI===================
17-03-02 12:56:04.467 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:04.468 -08 000000132 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:56:04.468 -08 000000056 INF: ===================TDI Scan Setup===================
17-03-02 12:56:04.468 -08 000000039 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:56:04.469 -08 000000081 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:56:04.469 -08 000000132 INF: ======================================
17-03-02 12:56:04.469 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:04.469 -08 000000039 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:56:04.470 -08 000000061 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:04.470 -08 000000039 INF: ======================================
17-03-02 12:56:04.472 -08 000000131 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:04.472 -08 000000091 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:56:04.473 -08 000000081 INF: ======================================
17-03-02 12:56:04.473 -08 000000056 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:04.473 -08 000000061 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:04.473 -08 000000032 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:56:04.474 -08 000000032 INF: ======================================
17-03-02 12:56:04.475 -08 000000056 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:56:04.475 -08 000000131 INF: ======================================
17-03-02 12:56:04.476 -08 000000056 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:04.477 -08 000000091 INF: ======================================
17-03-02 12:56:04.477 -08 000000056 INF: FPGA: Xmit ZSEL 3\n
17-03-02 12:56:04.478 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:04.480 -08 000000050 INF: ======================================
17-03-02 12:56:04.482 -08 000000050 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:56:04.483 -08 000000050 INF: ======================================
17-03-02 12:56:04.486 -08 000000108 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:56:04.487 -08 000000108 INF: ======================================
17-03-02 12:56:04.492 -08 000000110 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:04.498 -08 000000110 INF: ======================================
17-03-02 12:56:04.506 -08 000000132 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:56:04.507 -08 000000132 INF: ======================================
17-03-02 12:56:04.511 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:04.514 -08 000000086 INF: ======================================
17-03-02 12:56:04.516 -08 000000066 INF: ======================================
17-03-02 12:56:04.522 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:04.555 -08 000000133 INF: FPGA: Recv ZSEL 
17-03-02 12:56:04.556 -08 000000111 INF: Y Motor: Recv ok\r
17-03-02 12:56:04.556 -08 000000111 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:04.556 -08 000000111 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:04.556 -08 000000078 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:56:04.556 -08 000000078 INF: X Motor: Xmit PR VI\n
17-03-02 12:56:04.557 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:04.557 -08 000000056 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:04.558 -08 000000056 INF: FPGA: Xmit TDIBB 1\n
17-03-02 12:56:04.587 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1102 Request: {"Cycle":161,"Lane":1,"Tile":1102,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF184","HCSMMF199","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.588 -08 000000116 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1106 Request: {"Cycle":161,"Lane":1,"Tile":1106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF215","HCSMMF214","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.589 -08 000000137 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1104 Request: {"Cycle":161,"Lane":1,"Tile":1104,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF242","HCSMMF270","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.591 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1110 Request: {"Cycle":161,"Lane":1,"Tile":1110,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF210","HCSMMF232","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.592 -08 000000135 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1109 Request: {"Cycle":161,"Lane":1,"Tile":1109,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF191","HCSMMF233","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.593 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1108 Request: {"Cycle":161,"Lane":1,"Tile":1108,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF177","HCSMMF286","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.593 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1101 Request: {"Cycle":161,"Lane":1,"Tile":1101,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF189","HCSMMF261","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.594 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1112 Request: {"Cycle":161,"Lane":1,"Tile":1112,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF276","HCSMMF243","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.595 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1105 Request: {"Cycle":161,"Lane":1,"Tile":1105,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF211","HCSMMF283","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.596 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1107 Request: {"Cycle":161,"Lane":1,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF244","HCSMMF209","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.597 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1111 Request: {"Cycle":161,"Lane":1,"Tile":1111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF205","HCSMMF268","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.597 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1117 Request: {"Cycle":161,"Lane":1,"Tile":1117,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF238","HCSMMF181","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.598 -08 000000138 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1113 Request: {"Cycle":161,"Lane":1,"Tile":1113,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF245","HCSMMF201","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.599 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1119 Request: {"Cycle":161,"Lane":1,"Tile":1119,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF194","HCSMMF190","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.600 -08 000000134 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1114 Request: {"Cycle":161,"Lane":1,"Tile":1114,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF186","HCSMMF229","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.601 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1120 Request: {"Cycle":161,"Lane":1,"Tile":1120,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF262","HCSMMF208","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.602 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1125 Request: {"Cycle":161,"Lane":1,"Tile":1125,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF218","HCSMMF260","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.605 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1123 Request: {"Cycle":161,"Lane":1,"Tile":1123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF227","HCSMMF279","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.605 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1115 Request: {"Cycle":161,"Lane":1,"Tile":1115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF284","HCSMMF281","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.606 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1116 Request: {"Cycle":161,"Lane":1,"Tile":1116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF216","HCSMMF230","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.607 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1122 Request: {"Cycle":161,"Lane":1,"Tile":1122,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF271","HCSMMF258","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.608 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1121 Request: {"Cycle":161,"Lane":1,"Tile":1121,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF226","HCSMMF213","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.609 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1128 Request: {"Cycle":161,"Lane":1,"Tile":1128,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF274","HCSMMF247","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.610 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1126 Request: {"Cycle":161,"Lane":1,"Tile":1126,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF219","HCSMMF182","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.611 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1124 Request: {"Cycle":161,"Lane":1,"Tile":1124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF249","HCSMMF265","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.612 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1127 Request: {"Cycle":161,"Lane":1,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF212","HCSMMF256","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.613 -08 000000115 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1118 Request: {"Cycle":161,"Lane":1,"Tile":1118,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF197","HCSMMF220","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:04.614 -08 000000086 INF: FPGA: Recv TDIBB
17-03-02 12:56:04.614 -08 000000056 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:04.615 -08 000000078 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:56:04.615 -08 000000078 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:56:04.615 -08 000000111 INF: Y Motor: Recv ok\r
17-03-02 12:56:04.615 -08 000000078 INF: X Motor: Moving to 69.6975 mm @15.000 mm/sec, started at 68.5972 mm
17-03-02 12:56:04.615 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:04.615 -08 000000078 INF: X Motor: Xmit MA 4382\n
17-03-02 12:56:04.615 -08 000000056 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:56:04.616 -08 000000056 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:04.617 -08 000000056 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-03-02 12:56:04.618 -08 000000056 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-03-02 12:56:04.618 -08 000000056 INF: FPGA: Xmit ZSTEP 1792263\n
17-03-02 12:56:04.627 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:04.633 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-03-02 12:56:04.675 -08 000000118 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:04.675 -08 000000056 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:04.677 -08 000000078 INF: X Motor: Recv MA 4382\r\n>
17-03-02 12:56:04.677 -08 000000111 INF: Y Motor: Recv v 0\r
17-03-02 12:56:04.677 -08 000000111 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:04.677 -08 000000078 INF: X Motor: WaitUntilStopped 60073
17-03-02 12:56:04.677 -08 000000056 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:56:04.677 -08 000000111 INF: Y Motor: Set target position to 5956930 encoder counts
17-03-02 12:56:04.677 -08 000000111 INF: Y Motor: Xmit s r0xca 5956930\r
17-03-02 12:56:04.677 -08 000000056 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:04.679 -08 000000056 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:56:04.679 -08 000000056 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:56:04.679 -08 000000056 INF: Z Motor: Arming to move to -0.1124 mm
17-03-02 12:56:04.679 -08 000000056 INF: FPGA: Xmit ZYT 6436930 4\n
17-03-02 12:56:04.733 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:04.733 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-03-02 12:56:04.737 -08 000000054 INF: FPGA: Recv ZYT 
17-03-02 12:56:04.737 -08 000000056 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492199 enc / 14.922 mm / ) = 6436930 enc / 64.369 mm
17-03-02 12:56:04.737 -08 000000056 INF: FPGA: Xmit ZARM 29470\n
17-03-02 12:56:04.739 -08 000000111 INF: Y Motor: Recv ok\r
17-03-02 12:56:04.739 -08 000000111 INF: Y Motor: Start the move command
17-03-02 12:56:04.739 -08 000000111 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:04.793 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:04.799 -08 000000004 INF: FPGA: Recv ZARM
17-03-02 12:56:04.799 -08 000000056 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.904 ms
17-03-02 12:56:04.799 -08 000000056 INF: Z Motor: ArmAbsStepped took 119.7151 ms
17-03-02 12:56:04.799 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-03-02 12:56:04.799 -08 000000056 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:04.801 -08 000000111 INF: Y Motor: Recv ok\r
17-03-02 12:56:04.801 -08 000000111 INF: Y Motor: WaitUntilStopped 61986
17-03-02 12:56:04.801 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:04.801 -08 000000056 INF: ===================TDI Scan Setup===================
17-03-02 12:56:04.803 -08 000000056 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:56:04.803 -08 000000056 INF: ===================TDI Scan Setup===================
17-03-02 12:56:04.805 -08 000000056 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:56:04.805 -08 000000056 INF: ===================TDI Scan Setup===================
17-03-02 12:56:04.806 -08 000000056 INF: ======================================
17-03-02 12:56:04.807 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:04.862 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:04.862 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (6)===================
17-03-02 12:56:04.862 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-02 12:56:04.891 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:04.897 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-03-02 12:56:04.927 -08 000000111 INF: Y Motor: Unshifted Position: 1073609
17-03-02 12:56:04.977 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:04.986 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:04.992 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-03-02 12:56:05.072 -08 000000061 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:56:05.072 -08 000000061 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:56:05.072 -08 000000061 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:05.084 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:05.087 -08 000000061 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:05.089 -08 000000061 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:05.102 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:05.238 -08 000000111 INF: Y Motor: Unshifted Position: 1782202
17-03-02 12:56:05.288 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:05.301 -08 000000078 INF: X Motor: Xmit PR ER\n
17-03-02 12:56:05.363 -08 000000078 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:56:05.363 -08 000000078 INF: X Motor: Moved to 69.6982 after 686 ms
17-03-02 12:56:05.363 -08 000000078 INF: ======================================
17-03-02 12:56:05.370 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-03-02 12:56:05.413 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:05.549 -08 000000111 INF: Y Motor: Unshifted Position: 2559709
17-03-02 12:56:05.599 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:05.687 -08 000000061 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:56:05.688 -08 000000061 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:56:05.688 -08 000000061 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:05.704 -08 000000061 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:05.706 -08 000000061 INF: ===================Camera Arm TDI===================
17-03-02 12:56:05.708 -08 000000061 INF: ======================================
17-03-02 12:56:05.710 -08 000000070 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:05.712 -08 000000070 INF: ======================================
17-03-02 12:56:05.726 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:05.863 -08 000000111 INF: Y Motor: Unshifted Position: 3345499
17-03-02 12:56:05.913 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:05.962 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-03-02 12:56:06.037 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:06.048 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:06.148 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:06.173 -08 000000111 INF: Y Motor: Unshifted Position: 4120570
17-03-02 12:56:06.223 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:06.237 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:06.350 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:06.487 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:06.487 -08 000000111 INF: Y Motor: Unshifted Position: 4903841
17-03-02 12:56:06.537 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:06.550 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:06.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:06.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-03-02 12:56:06.663 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:06.798 -08 000000111 INF: Y Motor: Unshifted Position: 5682408
17-03-02 12:56:06.848 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:06.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:06.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:06.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:06.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-03-02 12:56:06.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-03-02 12:56:06.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°===================
17-03-02 12:56:06.972 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:07.108 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-03-02 12:56:07.108 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-03-02 12:56:07.109 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-03-02 12:56:07.109 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-03-02 12:56:07.110 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:07.110 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:07.111 -08 000000111 INF: Y Motor: Unshifted Position: 5956932
17-03-02 12:56:07.111 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:07.111 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:07.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:07.112 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:07.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:07.172 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)===================
17-03-02 12:56:07.172 -08 000000018 INF: Valve A1: Go to position 7
17-03-02 12:56:07.172 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:56:07.173 -08 000000111 INF: Y Motor: Recv v 0\r
17-03-02 12:56:07.173 -08 000000111 INF: Y Motor: Moved to 64.5693 after 2372 ms
17-03-02 12:56:07.173 -08 000000111 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:07.236 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 6\r
17-03-02 12:56:07.236 -08 000000018 INF: Valve A1: 25.862 seconds since last move, > 10.000 seconds required between moves
17-03-02 12:56:07.236 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 6 to 7
17-03-02 12:56:07.236 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW7\r
17-03-02 12:56:07.236 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-03-02 12:56:07.236 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:56:07.237 -08 000000111 INF: Y Motor: Recv v 4096\r
17-03-02 12:56:07.237 -08 000000111 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:07.237 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:07.297 -08 000000111 INF: Y Motor: Recv v 0\r
17-03-02 12:56:07.297 -08 000000111 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:07.297 -08 000000111 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:07.359 -08 000000111 INF: Y Motor: Recv v 402653184\r
17-03-02 12:56:07.359 -08 000000111 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:56:07.359 -08 000000111 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:07.359 -08 000000111 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:07.421 -08 000000111 INF: Y Motor: Recv v 0\r
17-03-02 12:56:07.421 -08 000000111 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:07.421 -08 000000111 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:07.421 -08 000000111 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:07.485 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-03-02 12:56:07.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:07.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-03-02 12:56:07.486 -08 000000111 INF: Y Motor: Recv ok\r
17-03-02 12:56:07.486 -08 000000111 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:07.486 -08 000000111 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:07.548 -08 000000111 INF: Y Motor: Recv ok\r
17-03-02 12:56:07.548 -08 000000111 INF: ======================================
17-03-02 12:56:07.549 -08 000000036 INF: ===================Move X,Y===================
17-03-02 12:56:07.550 -08 000000036 INF: ======================================
17-03-02 12:56:07.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:07.552 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:07.552 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-03-02 12:56:07.552 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-03-02 12:56:07.610 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:56:07.610 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-03-02 12:56:07.670 -08 000000072 INF: FPGA: Recv ZFREQCL
17-03-02 12:56:07.670 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:56:07.671 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:07.671 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:07.732 -08 000000036 INF: FPGA: Recv TDIYERD 6456931
17-03-02 12:56:07.732 -08 000000042 INF: Before scan, Y encoder from FPGA = 6456931 counts (64.569 mm)
17-03-02 12:56:07.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:07.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:07.734 -08 000000115 INF: ===================TDI FPGA Arm===================
17-03-02 12:56:07.734 -08 000000010 INF: ===================Set YMotor gains for scans===================
17-03-02 12:56:07.734 -08 000000010 INF: ======================================
17-03-02 12:56:07.735 -08 000000115 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:07.735 -08 000000115 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:56:07.735 -08 000000115 INF: FPGA: Xmit TDIYPOS 6346005\n
17-03-02 12:56:07.794 -08 000000061 INF: FPGA: Recv TDIYPOS
17-03-02 12:56:07.794 -08 000000115 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:07.796 -08 000000115 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:56:07.796 -08 000000115 INF: FPGA: Xmit TDIYARM3 139264 6436930 1 1\n
17-03-02 12:56:07.856 -08 000000133 INF: FPGA: Recv TDIYARM3
17-03-02 12:56:07.857 -08 000000115 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:07.858 -08 000000115 INF: ===================TDI FPGA Arm===================
17-03-02 12:56:07.859 -08 000000115 INF: ======================================
17-03-02 12:56:07.860 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:07.861 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:07.861 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:07.861 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:07.862 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:07.863 -08 000000010 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:56:07.863 -08 000000098 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:56:07.863 -08 000000010 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:56:07.863 -08 000000010 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:56:07.863 -08 000000010 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:56:07.863 -08 000000098 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:56:07.863 -08 000000010 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:56:07.863 -08 000000098 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:56:07.863 -08 000000098 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:56:07.864 -08 000000098 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:56:08.239 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:08.240 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:08.240 -08 000000045 INF: FPGA: Recv EX1MV
17-03-02 12:56:08.240 -08 000000045 INF: FPGA: Recv EX2MV
17-03-02 12:56:08.240 -08 000000098 INF: Excitation Filter 2: Moved -107 steps in 376.8697 ms
17-03-02 12:56:08.240 -08 000000098 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 377.0811 ms
17-03-02 12:56:08.240 -08 000000098 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 377.1582 ms
17-03-02 12:56:08.240 -08 000000010 INF: Excitation Filter 1: Moved -107 steps in 377.4419 ms
17-03-02 12:56:08.240 -08 000000010 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 377.5639 ms
17-03-02 12:56:08.241 -08 000000098 INF: ======================================
17-03-02 12:56:08.241 -08 000000010 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 377.6502 ms
17-03-02 12:56:08.241 -08 000000010 INF: ======================================
17-03-02 12:56:08.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:08.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:08.244 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:08.244 -08 000000061 INF: ===================FPGA Z Wait===================
17-03-02 12:56:08.244 -08 000000104 INF: ===================Camera TDI===================
17-03-02 12:56:08.244 -08 000000061 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:56:08.244 -08 000000131 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:08.245 -08 000000131 INF: Y Motor: Moving to 14.9210 mm @6.500 mm/sec, started at 64.5693 mm
17-03-02 12:56:08.245 -08 000000060 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:56:08.245 -08 000000131 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:08.245 -08 000000131 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:08.245 -08 000000060 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:56:08.245 -08 000000104 INF: ===================Camera TDI, Parallel===================
17-03-02 12:56:08.246 -08 000000057 INF: ===================Camera TDI===================
17-03-02 12:56:08.247 -08 000000009 INF: ===================Camera TDI===================
17-03-02 12:56:08.247 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:08.247 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:08.249 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:08.249 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:08.272 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:08.296 -08 000000131 INF: Y Motor: Recv ok\r
17-03-02 12:56:08.296 -08 000000131 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:08.296 -08 000000131 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:08.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:08.358 -08 000000131 INF: Y Motor: Recv ok\r
17-03-02 12:56:08.358 -08 000000131 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:08.365 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-03-02 12:56:08.402 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:08.402 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:08.402 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:08.402 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:08.420 -08 000000131 INF: Y Motor: Recv v 0\r
17-03-02 12:56:08.420 -08 000000131 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:08.420 -08 000000131 INF: Y Motor: Set target position to 992097 encoder counts
17-03-02 12:56:08.420 -08 000000131 INF: Y Motor: Xmit s r0xca 992097\r
17-03-02 12:56:08.457 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:56:08.484 -08 000000131 INF: Y Motor: Recv ok\r
17-03-02 12:56:08.484 -08 000000131 INF: Y Motor: Start the move command
17-03-02 12:56:08.484 -08 000000131 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:08.545 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-03-02 12:56:08.545 -08 000000018 INF: Current Position of Pump is: 0
17-03-02 12:56:08.546 -08 000000131 INF: Y Motor: Recv ok\r
17-03-02 12:56:08.546 -08 000000131 INF: Y Motor: WaitUntilStopped 67638
17-03-02 12:56:08.546 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:08.552 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:08.552 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:08.552 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:08.552 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:08.607 -08 000000028 INF: FPGA: Recv ZWAIT 
17-03-02 12:56:08.607 -08 000000061 INF: ======================================
17-03-02 12:56:08.645 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-03-02 12:56:08.671 -08 000000131 INF: Y Motor: Unshifted Position: 5894645
17-03-02 12:56:08.702 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:56:08.702 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:56:08.702 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:56:08.702 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:56:08.702 -08 000000057 INF: ===================Camera #2 Frame #5===================
17-03-02 12:56:08.702 -08 000000009 INF: ===================Camera #0 Frame #5===================
17-03-02 12:56:08.721 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:08.732 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:08.832 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:08.845 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:08.867 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:56:08.867 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:56:08.867 -08 000000009 INF: ===================Camera #0 Frame #11===================
17-03-02 12:56:08.868 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:56:08.868 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:56:08.868 -08 000000057 INF: ===================Camera #2 Frame #11===================
17-03-02 12:56:08.918 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:08.981 -08 000000131 INF: Y Motor: Unshifted Position: 5692928
17-03-02 12:56:09.031 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:09.035 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:56:09.035 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:56:09.035 -08 000000009 INF: ===================Camera #0 Frame #17===================
17-03-02 12:56:09.037 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:56:09.037 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:56:09.037 -08 000000057 INF: ===================Camera #2 Frame #17===================
17-03-02 12:56:09.158 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:09.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:09.210 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-03-02 12:56:09.210 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-03-02 12:56:09.210 -08 000000009 INF: ===================Camera #0 Frame #24===================
17-03-02 12:56:09.215 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-03-02 12:56:09.215 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-03-02 12:56:09.215 -08 000000057 INF: ===================Camera #2 Frame #24===================
17-03-02 12:56:09.231 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:09.294 -08 000000131 INF: Y Motor: Unshifted Position: 5489484
17-03-02 12:56:09.331 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-03-02 12:56:09.344 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:09.388 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-03-02 12:56:09.388 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-03-02 12:56:09.388 -08 000000057 INF: ===================Camera #2 Frame #30===================
17-03-02 12:56:09.391 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-03-02 12:56:09.391 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-03-02 12:56:09.391 -08 000000009 INF: ===================Camera #0 Frame #30===================
17-03-02 12:56:09.417 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:09.468 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:09.517 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:09.557 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:56:09.557 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:56:09.557 -08 000000057 INF: ===================Camera #2 Frame #36===================
17-03-02 12:56:09.567 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-03-02 12:56:09.567 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-03-02 12:56:09.567 -08 000000009 INF: ===================Camera #0 Frame #37===================
17-03-02 12:56:09.607 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:09.607 -08 000000131 INF: Y Motor: Unshifted Position: 5285811
17-03-02 12:56:09.607 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-03-02 12:56:09.657 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:09.707 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP11904R\r
17-03-02 12:56:09.726 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-03-02 12:56:09.726 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-03-02 12:56:09.726 -08 000000057 INF: ===================Camera #2 Frame #43===================
17-03-02 12:56:09.745 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-03-02 12:56:09.745 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-03-02 12:56:09.745 -08 000000009 INF: ===================Camera #0 Frame #43===================
17-03-02 12:56:09.781 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:09.792 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:09.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:09.899 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-03-02 12:56:09.899 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-03-02 12:56:09.899 -08 000000057 INF: ===================Camera #2 Frame #49===================
17-03-02 12:56:09.914 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-03-02 12:56:09.914 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-03-02 12:56:09.914 -08 000000009 INF: ===================Camera #0 Frame #50===================
17-03-02 12:56:09.917 -08 000000131 INF: Y Motor: Unshifted Position: 5084095
17-03-02 12:56:09.967 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:09.980 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:10.068 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-03-02 12:56:10.068 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-03-02 12:56:10.068 -08 000000057 INF: ===================Camera #2 Frame #55===================
17-03-02 12:56:10.086 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-03-02 12:56:10.086 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-03-02 12:56:10.086 -08 000000009 INF: ===================Camera #0 Frame #56===================
17-03-02 12:56:10.095 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:10.231 -08 000000131 INF: Y Motor: Unshifted Position: 4879996
17-03-02 12:56:10.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:10.237 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-03-02 12:56:10.237 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-03-02 12:56:10.237 -08 000000057 INF: ===================Camera #2 Frame #62===================
17-03-02 12:56:10.254 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-03-02 12:56:10.254 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-03-02 12:56:10.254 -08 000000009 INF: ===================Camera #0 Frame #62===================
17-03-02 12:56:10.281 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:10.294 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:10.405 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:10.409 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-03-02 12:56:10.409 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-03-02 12:56:10.409 -08 000000057 INF: ===================Camera #2 Frame #68===================
17-03-02 12:56:10.422 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-03-02 12:56:10.422 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-03-02 12:56:10.422 -08 000000009 INF: ===================Camera #0 Frame #68===================
17-03-02 12:56:10.541 -08 000000131 INF: Y Motor: Unshifted Position: 4678279
17-03-02 12:56:10.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:10.578 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-03-02 12:56:10.578 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-03-02 12:56:10.578 -08 000000057 INF: ===================Camera #2 Frame #74===================
17-03-02 12:56:10.591 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:10.591 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-03-02 12:56:10.591 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-03-02 12:56:10.591 -08 000000009 INF: ===================Camera #0 Frame #75===================
17-03-02 12:56:10.605 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:10.718 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:10.747 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-03-02 12:56:10.747 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-03-02 12:56:10.747 -08 000000057 INF: ===================Camera #2 Frame #80===================
17-03-02 12:56:10.762 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-03-02 12:56:10.762 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-03-02 12:56:10.762 -08 000000009 INF: ===================Camera #0 Frame #81===================
17-03-02 12:56:10.854 -08 000000131 INF: Y Motor: Unshifted Position: 4473518
17-03-02 12:56:10.855 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:10.904 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:10.915 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:10.916 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-03-02 12:56:10.916 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-03-02 12:56:10.916 -08 000000057 INF: ===================Camera #2 Frame #87===================
17-03-02 12:56:10.931 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-03-02 12:56:10.931 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-03-02 12:56:10.931 -08 000000009 INF: ===================Camera #0 Frame #87===================
17-03-02 12:56:11.028 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:11.088 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-03-02 12:56:11.088 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-03-02 12:56:11.088 -08 000000057 INF: ===================Camera #2 Frame #93===================
17-03-02 12:56:11.099 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-03-02 12:56:11.099 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-03-02 12:56:11.099 -08 000000009 INF: ===================Camera #0 Frame #93===================
17-03-02 12:56:11.165 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:11.167 -08 000000131 INF: Y Motor: Unshifted Position: 4271802
17-03-02 12:56:11.217 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:11.228 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:11.258 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-03-02 12:56:11.258 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-03-02 12:56:11.258 -08 000000057 INF: ===================Camera #2 Frame #99===================
17-03-02 12:56:11.268 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-03-02 12:56:11.268 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-03-02 12:56:11.268 -08 000000009 INF: ===================Camera #0 Frame #99===================
17-03-02 12:56:11.329 -08 000000098 INF: RunCopyService queue size at 3/2/2017 12:56:11 PM is 1
17-03-02 12:56:11.342 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:11.427 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-03-02 12:56:11.427 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-03-02 12:56:11.427 -08 000000057 INF: ===================Camera #2 Frame #105===================
17-03-02 12:56:11.436 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-03-02 12:56:11.436 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-03-02 12:56:11.438 -08 000000009 INF: ===================Camera #0 Frame #106===================
17-03-02 12:56:11.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:11.481 -08 000000131 INF: Y Motor: Unshifted Position: 4068350
17-03-02 12:56:11.531 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:11.541 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:11.596 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-03-02 12:56:11.596 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-03-02 12:56:11.596 -08 000000057 INF: ===================Camera #2 Frame #112===================
17-03-02 12:56:11.609 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-03-02 12:56:11.609 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-03-02 12:56:11.609 -08 000000009 INF: ===================Camera #0 Frame #112===================
17-03-02 12:56:11.654 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:11.768 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-03-02 12:56:11.768 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-03-02 12:56:11.768 -08 000000057 INF: ===================Camera #2 Frame #118===================
17-03-02 12:56:11.777 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-03-02 12:56:11.777 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-03-02 12:56:11.777 -08 000000009 INF: ===================Camera #0 Frame #118===================
17-03-02 12:56:11.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:11.792 -08 000000131 INF: Y Motor: Unshifted Position: 3865335
17-03-02 12:56:11.842 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:11.853 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:11.937 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-03-02 12:56:11.937 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-03-02 12:56:11.937 -08 000000057 INF: ===================Camera #2 Frame #124===================
17-03-02 12:56:11.945 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-03-02 12:56:11.945 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-03-02 12:56:11.945 -08 000000009 INF: ===================Camera #0 Frame #124===================
17-03-02 12:56:11.966 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:12.102 -08 000000131 INF: Y Motor: Unshifted Position: 3663834
17-03-02 12:56:12.103 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:12.106 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-03-02 12:56:12.106 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-03-02 12:56:12.106 -08 000000057 INF: ===================Camera #2 Frame #130===================
17-03-02 12:56:12.113 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-03-02 12:56:12.113 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-03-02 12:56:12.113 -08 000000009 INF: ===================Camera #0 Frame #131===================
17-03-02 12:56:12.152 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:12.165 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:12.275 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-03-02 12:56:12.275 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-03-02 12:56:12.275 -08 000000057 INF: ===================Camera #2 Frame #137===================
17-03-02 12:56:12.278 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:12.284 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-03-02 12:56:12.284 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-03-02 12:56:12.284 -08 000000009 INF: ===================Camera #0 Frame #137===================
17-03-02 12:56:12.415 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:12.416 -08 000000131 INF: Y Motor: Unshifted Position: 3459514
17-03-02 12:56:12.447 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-03-02 12:56:12.447 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-03-02 12:56:12.447 -08 000000057 INF: ===================Camera #2 Frame #143===================
17-03-02 12:56:12.452 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-03-02 12:56:12.452 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-03-02 12:56:12.452 -08 000000009 INF: ===================Camera #0 Frame #143===================
17-03-02 12:56:12.466 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:12.477 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:12.593 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:12.618 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-03-02 12:56:12.618 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-03-02 12:56:12.618 -08 000000057 INF: ===================Camera #2 Frame #149===================
17-03-02 12:56:12.622 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-03-02 12:56:12.622 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-03-02 12:56:12.622 -08 000000009 INF: ===================Camera #0 Frame #149===================
17-03-02 12:56:12.727 -08 000000131 INF: Y Motor: Unshifted Position: 3257369
17-03-02 12:56:12.727 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:12.777 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:12.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:12.789 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-03-02 12:56:12.789 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-03-02 12:56:12.789 -08 000000057 INF: ===================Camera #2 Frame #155===================
17-03-02 12:56:12.792 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-03-02 12:56:12.792 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-03-02 12:56:12.792 -08 000000009 INF: ===================Camera #0 Frame #156===================
17-03-02 12:56:12.903 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:12.960 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-03-02 12:56:12.960 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-03-02 12:56:12.960 -08 000000057 INF: ===================Camera #2 Frame #162===================
17-03-02 12:56:12.965 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-03-02 12:56:12.965 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-03-02 12:56:12.965 -08 000000009 INF: ===================Camera #0 Frame #162===================
17-03-02 12:56:13.037 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:13.039 -08 000000131 INF: Y Motor: Unshifted Position: 3053701
17-03-02 12:56:13.089 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:13.100 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:13.134 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-03-02 12:56:13.134 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-03-02 12:56:13.134 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-03-02 12:56:13.134 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-03-02 12:56:13.134 -08 000000009 INF: ===================Camera #0 Frame #168===================
17-03-02 12:56:13.134 -08 000000057 INF: ===================Camera #2 Frame #168===================
17-03-02 12:56:13.213 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:13.304 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-03-02 12:56:13.304 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-03-02 12:56:13.304 -08 000000009 INF: ===================Camera #0 Frame #174===================
17-03-02 12:56:13.305 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-03-02 12:56:13.305 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-03-02 12:56:13.305 -08 000000057 INF: ===================Camera #2 Frame #174===================
17-03-02 12:56:13.350 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:13.352 -08 000000131 INF: Y Motor: Unshifted Position: 2851559
17-03-02 12:56:13.402 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:13.413 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:13.474 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-03-02 12:56:13.474 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-03-02 12:56:13.474 -08 000000009 INF: ===================Camera #0 Frame #181===================
17-03-02 12:56:13.476 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-03-02 12:56:13.476 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-03-02 12:56:13.476 -08 000000057 INF: ===================Camera #2 Frame #181===================
17-03-02 12:56:13.527 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:13.647 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-03-02 12:56:13.647 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-03-02 12:56:13.647 -08 000000009 INF: ===================Camera #0 Frame #187===================
17-03-02 12:56:13.651 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-03-02 12:56:13.651 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-03-02 12:56:13.651 -08 000000057 INF: ===================Camera #2 Frame #187===================
17-03-02 12:56:13.663 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:13.663 -08 000000131 INF: Y Motor: Unshifted Position: 2647892
17-03-02 12:56:13.713 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:13.724 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:13.817 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-03-02 12:56:13.817 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-03-02 12:56:13.817 -08 000000009 INF: ===================Camera #0 Frame #193===================
17-03-02 12:56:13.822 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-03-02 12:56:13.822 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-03-02 12:56:13.822 -08 000000057 INF: ===================Camera #2 Frame #193===================
17-03-02 12:56:13.839 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:13.974 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:13.976 -08 000000131 INF: Y Motor: Unshifted Position: 2445094
17-03-02 12:56:13.987 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-03-02 12:56:13.987 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-03-02 12:56:13.987 -08 000000009 INF: ===================Camera #0 Frame #200===================
17-03-02 12:56:13.993 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-03-02 12:56:13.993 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-03-02 12:56:13.993 -08 000000057 INF: ===================Camera #2 Frame #200===================
17-03-02 12:56:14.026 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:14.037 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:14.150 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:14.161 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-03-02 12:56:14.161 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-03-02 12:56:14.161 -08 000000009 INF: ===================Camera #0 Frame #206===================
17-03-02 12:56:14.168 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-03-02 12:56:14.168 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-03-02 12:56:14.168 -08 000000057 INF: ===================Camera #2 Frame #206===================
17-03-02 12:56:14.286 -08 000000131 INF: Y Motor: Unshifted Position: 2242725
17-03-02 12:56:14.287 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:14.331 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-03-02 12:56:14.331 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-03-02 12:56:14.331 -08 000000009 INF: ===================Camera #0 Frame #212===================
17-03-02 12:56:14.336 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:14.339 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-03-02 12:56:14.339 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-03-02 12:56:14.339 -08 000000057 INF: ===================Camera #2 Frame #213===================
17-03-02 12:56:14.349 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:14.462 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:14.499 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-03-02 12:56:14.499 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-03-02 12:56:14.499 -08 000000009 INF: ===================Camera #0 Frame #218===================
17-03-02 12:56:14.513 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-03-02 12:56:14.513 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-03-02 12:56:14.513 -08 000000057 INF: ===================Camera #2 Frame #219===================
17-03-02 12:56:14.598 -08 000000131 INF: Y Motor: Unshifted Position: 2041231
17-03-02 12:56:14.599 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:14.648 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:14.659 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:14.669 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-03-02 12:56:14.669 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-03-02 12:56:14.669 -08 000000009 INF: ===================Camera #0 Frame #225===================
17-03-02 12:56:14.684 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-03-02 12:56:14.684 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-03-02 12:56:14.684 -08 000000057 INF: ===================Camera #2 Frame #225===================
17-03-02 12:56:14.775 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:14.842 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-03-02 12:56:14.842 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-03-02 12:56:14.842 -08 000000009 INF: ===================Camera #0 Frame #231===================
17-03-02 12:56:14.855 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-03-02 12:56:14.855 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-03-02 12:56:14.855 -08 000000057 INF: ===================Camera #2 Frame #232===================
17-03-02 12:56:14.909 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:14.911 -08 000000131 INF: Y Motor: Unshifted Position: 1836912
17-03-02 12:56:14.961 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:14.971 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:15.012 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-03-02 12:56:15.012 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-03-02 12:56:15.012 -08 000000009 INF: ===================Camera #0 Frame #237===================
17-03-02 12:56:15.030 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-03-02 12:56:15.030 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-03-02 12:56:15.030 -08 000000057 INF: ===================Camera #2 Frame #238===================
17-03-02 12:56:15.087 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:15.182 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-03-02 12:56:15.182 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-03-02 12:56:15.182 -08 000000009 INF: ===================Camera #0 Frame #244===================
17-03-02 12:56:15.201 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-03-02 12:56:15.201 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-03-02 12:56:15.201 -08 000000057 INF: ===================Camera #2 Frame #244===================
17-03-02 12:56:15.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:15.224 -08 000000131 INF: Y Motor: Unshifted Position: 1635412
17-03-02 12:56:15.274 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:15.285 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:15.355 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-03-02 12:56:15.355 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-03-02 12:56:15.355 -08 000000009 INF: ===================Camera #0 Frame #250===================
17-03-02 12:56:15.372 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-03-02 12:56:15.372 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-03-02 12:56:15.372 -08 000000057 INF: ===================Camera #2 Frame #251===================
17-03-02 12:56:15.398 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:15.525 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-03-02 12:56:15.525 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-03-02 12:56:15.525 -08 000000009 INF: ===================Camera #0 Frame #256===================
17-03-02 12:56:15.534 -08 000000131 INF: Y Motor: Unshifted Position: 1432383
17-03-02 12:56:15.535 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:15.546 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-03-02 12:56:15.546 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-03-02 12:56:15.546 -08 000000057 INF: ===================Camera #2 Frame #257===================
17-03-02 12:56:15.584 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:15.595 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:15.695 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-03-02 12:56:15.695 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-03-02 12:56:15.695 -08 000000009 INF: ===================Camera #0 Frame #262===================
17-03-02 12:56:15.710 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:15.717 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-03-02 12:56:15.717 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-03-02 12:56:15.717 -08 000000057 INF: ===================Camera #2 Frame #263===================
17-03-02 12:56:15.845 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:15.849 -08 000000131 INF: Y Motor: Unshifted Position: 1228931
17-03-02 12:56:15.864 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-03-02 12:56:15.864 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-03-02 12:56:15.864 -08 000000009 INF: ===================Camera #0 Frame #269===================
17-03-02 12:56:15.887 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-03-02 12:56:15.887 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-03-02 12:56:15.887 -08 000000057 INF: ===================Camera #2 Frame #269===================
17-03-02 12:56:15.899 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:15.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:15.970 -08 000000056 INF: FPGA: Recv TDIYWAIT
17-03-02 12:56:15.970 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:15.972 -08 000000060 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:56:15.973 -08 000000105 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:56:15.973 -08 000000095 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:56:15.973 -08 000000105 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:56:15.973 -08 000000105 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:56:15.973 -08 000000105 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:56:15.973 -08 000000105 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:56:15.973 -08 000000095 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:56:15.973 -08 000000095 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:56:15.973 -08 000000095 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:56:15.974 -08 000000095 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:56:16.022 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:16.035 -08 000000009 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:56:16.035 -08 000000009 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:56:16.035 -08 000000009 INF: ===================Camera #0 Frame #272===================
17-03-02 12:56:16.044 -08 000000009 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:56:16.045 -08 000000009 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:16.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:16.161 -08 000000131 INF: Y Motor: Unshifted Position: 1026568
17-03-02 12:56:16.176 -08 000000009 INF: Camera #0 ReleaseBuffer
17-03-02 12:56:16.176 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:56:16.176 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:56:16.176 -08 000000057 INF: ===================Camera #2 Frame #272===================
17-03-02 12:56:16.176 -08 000000009 INF: ===================Camera TDI===================
17-03-02 12:56:16.187 -08 000000057 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:56:16.187 -08 000000057 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:16.210 -08 000000009 INF: ======================================
17-03-02 12:56:16.211 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:16.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:16.345 -08 000000055 INF: FPGA: Recv EX2MV
17-03-02 12:56:16.345 -08 000000105 INF: Excitation Filter 2: Moved 107 steps in 371.9507 ms
17-03-02 12:56:16.345 -08 000000105 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0644 ms
17-03-02 12:56:16.345 -08 000000105 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.137 ms
17-03-02 12:56:16.345 -08 000000105 INF: ======================================
17-03-02 12:56:16.347 -08 000000131 INF: Y Motor: Unshifted Position: 992095
17-03-02 12:56:16.347 -08 000000131 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:16.347 -08 000000131 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:16.361 -08 000000057 INF: Camera #2 ReleaseBuffer
17-03-02 12:56:16.361 -08 000000057 INF: ===================Camera TDI===================
17-03-02 12:56:16.393 -08 000000057 INF: ======================================
17-03-02 12:56:16.394 -08 000000104 INF: ===================Camera TDI===================
17-03-02 12:56:16.396 -08 000000104 INF: ======================================
17-03-02 12:56:16.407 -08 000000136 INF: FPGA: Recv EX1MV
17-03-02 12:56:16.407 -08 000000095 INF: Excitation Filter 1: Moved 107 steps in 433.7711 ms
17-03-02 12:56:16.407 -08 000000095 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 433.9194 ms
17-03-02 12:56:16.407 -08 000000095 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 434.0288 ms
17-03-02 12:56:16.407 -08 000000095 INF: ======================================
17-03-02 12:56:16.409 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:16.409 -08 000000131 INF: Y Motor: Recv v 0\r
17-03-02 12:56:16.409 -08 000000131 INF: Y Motor: Moved to 14.9210 after 7862 ms
17-03-02 12:56:16.409 -08 000000131 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:16.410 -08 000000060 INF: ======================================
17-03-02 12:56:16.471 -08 000000131 INF: Y Motor: Recv v 4097\r
17-03-02 12:56:16.471 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:16.471 -08 000000131 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:16.471 -08 000000131 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:16.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:16.532 -08 000000131 INF: Y Motor: Recv v 0\r
17-03-02 12:56:16.532 -08 000000131 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:16.532 -08 000000131 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:16.597 -08 000000131 INF: Y Motor: Recv v 134217728\r
17-03-02 12:56:16.597 -08 000000131 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:56:16.597 -08 000000131 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:16.597 -08 000000131 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:16.659 -08 000000131 INF: Y Motor: Recv v 0\r
17-03-02 12:56:16.659 -08 000000131 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:16.659 -08 000000131 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:16.659 -08 000000131 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:16.719 -08 000000131 INF: Y Motor: Recv ok\r
17-03-02 12:56:16.719 -08 000000131 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:16.719 -08 000000131 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:16.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:16.785 -08 000000131 INF: Y Motor: Recv ok\r
17-03-02 12:56:16.785 -08 000000131 INF: ======================================
17-03-02 12:56:16.786 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:16.787 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:16.788 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:16.788 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:56:16.842 -08 000000060 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:56:16.842 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:16.843 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:16.907 -08 000000028 INF: FPGA: Recv TDIYERD 1492098
17-03-02 12:56:16.907 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:56:16.969 -08 000000056 INF: FPGA: Recv ZADCR 32130
17-03-02 12:56:16.969 -08 000000042 INF: At scan end Y pos = 14.921 and Z pos = -0.123. Y moved -48.539 mm
17-03-02 12:56:16.969 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:56:17.031 -08 000000029 INF: FPGA: Recv TDIPULSES 139265
17-03-02 12:56:17.031 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-03-02 12:56:17.031 -08 000000042 INF: TDIScan finished after 12716.7002 ms
17-03-02 12:56:17.031 -08 000000042 INF: Image[0]: Y should trigger at 63.460 mm, 2nd row was at 64.369 mm (error = 0.909 mm)
17-03-02 12:56:17.031 -08 000000042 INF: Image[2]: Y should trigger at 63.460 mm, 2nd row was at 64.369 mm (error = 0.909 mm)
17-03-02 12:56:17.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:17.067 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.840 um
17-03-02 12:56:17.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:17.068 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:56:17.093 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:17.095 -08 000000104 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:56:17.096 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:17.097 -08 000000071 INF: ===================Dither Clean Up Command===================
17-03-02 12:56:17.097 -08 000000083 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:56:17.097 -08 000000039 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:56:17.097 -08 000000122 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:56:17.097 -08 000000083 INF: ======================================
17-03-02 12:56:17.097 -08 000000039 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:56:17.097 -08 000000122 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:56:17.097 -08 000000122 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:56:17.097 -08 000000039 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:56:17.098 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:56:17.098 -08 000000138 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:17.099 -08 000000073 INF: FPGA: Xmit ZSEL 0\n
17-03-02 12:56:17.101 -08 000000138 INF: ===================LFT:Extracting coords===================
17-03-02 12:56:17.126 -08 000000138 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:17.127 -08 000000138 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-03-02 12:56:17.128 -08 000000129 INF: ===================LookupFocusTracking===================
17-03-02 12:56:17.128 -08 000000009 INF: ===================LookupFocusTracking===================
17-03-02 12:56:17.128 -08 000000061 INF: ===================LookupFocusTracking===================
17-03-02 12:56:17.128 -08 000000134 INF: ===================LookupFocusTracking===================
17-03-02 12:56:17.128 -08 000000129 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:17.128 -08 000000061 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:17.129 -08 000000134 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:17.129 -08 000000009 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:17.154 -08 000000098 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:17.154 -08 000000098 INF: FPGA: Recv ZSEL 
17-03-02 12:56:17.154 -08 000000073 INF: FPGA: Xmit ZDACW 39956\n
17-03-02 12:56:17.154 -08 000000122 INF: ======================================
17-03-02 12:56:17.155 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:17.156 -08 000000039 INF: Y Motor: Recv ok\r
17-03-02 12:56:17.156 -08 000000039 INF: ======================================
17-03-02 12:56:17.203 -08 000000129 INF: FC:B, C:161,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:17.203 -08 000000061 INF: FC:B, C:161,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:17.203 -08 000000134 INF: FC:B, C:161,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:17.203 -08 000000009 INF: FC:B, C:161,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:17.219 -08 000000036 INF: FPGA: Recv ZDACW 
17-03-02 12:56:17.220 -08 000000073 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-03-02 12:56:17.220 -08 000000073 INF: FPGA: Xmit TDIBB 0\n
17-03-02 12:56:17.279 -08 000000132 INF: FPGA: Recv TDIBB
17-03-02 12:56:17.279 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:56:17.280 -08 000000073 INF: ======================================
17-03-02 12:56:17.354 -08 000000129 INF: LFT found best fwhm score 2.000673 in 151 ms
17-03-02 12:56:17.354 -08 000000129 INF: LFT found good score at index 7869 with fwhm value 2.000673. Next cycle, cycle 162 starting Z position for top surface is at -0.151 mm FC:B, C:161,L:1,T
17-03-02 12:56:17.354 -08 000000129 INF: ===================LookupFocusTracking===================
17-03-02 12:56:17.354 -08 000000009 INF: LFT found best fwhm score 2.000194 in 151 ms
17-03-02 12:56:17.354 -08 000000134 INF: LFT found best fwhm score 2.239157 in 151 ms
17-03-02 12:56:17.354 -08 000000134 INF: LFT found good score at index 7849 with fwhm value 2.239157. Next cycle, cycle 162 starting Z position for top surface is at -0.151 mm FC:B, C:161,L:1,T
17-03-02 12:56:17.354 -08 000000061 INF: LFT found best fwhm score 2.000286 in 151 ms
17-03-02 12:56:17.354 -08 000000061 INF: LFT found good score at index 2533 with fwhm value 2.000286. Next cycle, cycle 162 starting Z position for top surface is at -0.153 mm FC:B, C:161,L:1,T
17-03-02 12:56:17.355 -08 000000129 INF: ======================================
17-03-02 12:56:17.355 -08 000000134 INF: ===================LookupFocusTracking===================
17-03-02 12:56:17.355 -08 000000061 INF: ===================LookupFocusTracking===================
17-03-02 12:56:17.355 -08 000000134 INF: ======================================
17-03-02 12:56:17.355 -08 000000061 INF: ======================================
17-03-02 12:56:17.355 -08 000000009 INF: LFT found good score at index 101 with fwhm value 2.000194. Next cycle, cycle 162 starting Z position for top surface is at -0.153 mm FC:B, C:161,L:1,T
17-03-02 12:56:17.355 -08 000000009 INF: ===================LookupFocusTracking===================
17-03-02 12:56:17.356 -08 000000009 INF: ======================================
17-03-02 12:56:17.357 -08 000000138 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:17.358 -08 000000138 INF: LFT weighted average best Z for top surface is at -0.152mm FC:B, C:161,L:1,T
17-03-02 12:56:17.358 -08 000000138 INF: ======================================
17-03-02 12:56:17.359 -08 000000071 INF: ======================================
17-03-02 12:56:17.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:17.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:56:17.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:17.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:56:17.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:17.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:56:17.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:17.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:56:17.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:17.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-03-02 12:56:17.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-03-02 12:56:17.364 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis===================
17-03-02 12:56:17.364 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-03-02 12:56:17.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Waiting for image analysis===================
17-03-02 12:56:17.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-03-02 12:56:17.388 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-03-02 12:56:17.388 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:17.388 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:56:17.388 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-03-02 12:56:17.388 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:56:17.389 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 1===================
17-03-02 12:56:17.389 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface===================
17-03-02 12:56:17.444 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:17.453 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:17.458 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:17.458 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:56:17.458 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:56:17.475 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1208 Request: {"Cycle":161,"Lane":1,"Tile":1208,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF242","HCSMMF248","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.529 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:17.586 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1212 Request: {"Cycle":161,"Lane":1,"Tile":1212,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF269","HCSMMF268","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.592 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1205 Request: {"Cycle":161,"Lane":1,"Tile":1205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF270","HCSMMF255","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.595 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1201 Request: {"Cycle":161,"Lane":1,"Tile":1201,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF220","HCSMMF263","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.596 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1210 Request: {"Cycle":161,"Lane":1,"Tile":1210,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF283","HCSMMF185","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.597 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1216 Request: {"Cycle":161,"Lane":1,"Tile":1216,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF217","HCSMMF279","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.598 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1213 Request: {"Cycle":161,"Lane":1,"Tile":1213,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF194","HCSMMF225","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.599 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1218 Request: {"Cycle":161,"Lane":1,"Tile":1218,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF230","HCSMMF227","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.600 -08 000000115 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1211 Request: {"Cycle":161,"Lane":1,"Tile":1211,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF284","HCSMMF204","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.601 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1221 Request: {"Cycle":161,"Lane":1,"Tile":1221,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF206","HCSMMF218","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.602 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1217 Request: {"Cycle":161,"Lane":1,"Tile":1217,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF261","HCSMMF196","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.603 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1222 Request: {"Cycle":161,"Lane":1,"Tile":1222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF244","HCSMMF192","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.603 -08 000000134 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1215 Request: {"Cycle":161,"Lane":1,"Tile":1215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF223","HCSMMF216","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.604 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1206 Request: {"Cycle":161,"Lane":1,"Tile":1206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF286","HCSMMF258","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.605 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1202 Request: {"Cycle":161,"Lane":1,"Tile":1202,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF265","HCSMMF202","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.606 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1204 Request: {"Cycle":161,"Lane":1,"Tile":1204,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF275","HCSMMF187","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.606 -08 000000136 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1207 Request: {"Cycle":161,"Lane":1,"Tile":1207,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF250","HCSMMF264","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.607 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1214 Request: {"Cycle":161,"Lane":1,"Tile":1214,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF240","HCSMMF201","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.608 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1203 Request: {"Cycle":161,"Lane":1,"Tile":1203,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF219","HCSMMF178","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.609 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:56:17.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:17.609 -08 000000042 INF: Compensator: Moving OutOfPath
17-03-02 12:56:17.609 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-03-02 12:56:17.609 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1223 Request: {"Cycle":161,"Lane":1,"Tile":1223,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF221","HCSMMF246","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.610 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1219 Request: {"Cycle":161,"Lane":1,"Tile":1219,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF278","HCSMMF257","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.611 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1209 Request: {"Cycle":161,"Lane":1,"Tile":1209,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF251","HCSMMF273","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.612 -08 000000132 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1220 Request: {"Cycle":161,"Lane":1,"Tile":1220,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF181","HCSMMF260","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.614 -08 000000116 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1227 Request: {"Cycle":161,"Lane":1,"Tile":1227,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF188","HCSMMF234","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.804 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:17.805 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1226 Request: {"Cycle":161,"Lane":1,"Tile":1226,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF186","HCSMMF213","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.807 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1224 Request: {"Cycle":161,"Lane":1,"Tile":1224,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF224","HCSMMF236","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.808 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1228 Request: {"Cycle":161,"Lane":1,"Tile":1228,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF243","HCSMMF195","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.810 -08 000000112 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 161 Tile: 1225 Request: {"Cycle":161,"Lane":1,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF207","HCSMMF226","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:17.814 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:17.820 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-03-02 12:56:17.858 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:17.921 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:17.921 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-03-02 12:56:17.980 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:17.981 -08 000000054 INF: FPGA: Recv MIOCOMPR
17-03-02 12:56:17.981 -08 000000042 INF: Compensator: Moved OutOfPath in 372 ms
17-03-02 12:56:17.981 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543
17-03-02 12:56:17.982 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:17.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:17.984 -08 000000057 INF: ===================Move Tilt Motor 1===================
17-03-02 12:56:17.984 -08 000000098 INF: ===================Move Tilt Motor 2===================
17-03-02 12:56:17.984 -08 000000057 INF: Tilt Motor 1: Moving to 4.9972 mm, started at 5.0686 mm, delta = -0.0714 mm
17-03-02 12:56:17.984 -08 000000105 INF: ===================Move Tilt Motor 3===================
17-03-02 12:56:17.984 -08 000000098 INF: Tilt Motor 2: Moving to 5.4000 mm, started at 5.2812 mm, delta = 0.1189 mm
17-03-02 12:56:17.984 -08 000000057 INF: FPGA: Xmit T1RD\n
17-03-02 12:56:17.984 -08 000000105 INF: Tilt Motor 3: Moving to 5.3454 mm, started at 5.2250 mm, delta = 0.1204 mm
17-03-02 12:56:17.985 -08 000000098 INF: FPGA: Xmit T2RD\n
17-03-02 12:56:17.986 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-03-02 12:56:17.987 -08 000000105 INF: FPGA: Xmit T3RD\n
17-03-02 12:56:18.045 -08 000000073 INF: FPGA: Recv T1RD 19954
17-03-02 12:56:18.046 -08 000000073 INF: FPGA: Recv T2RD 20792
17-03-02 12:56:18.046 -08 000000073 INF: FPGA: Recv T3RD 20571
17-03-02 12:56:18.046 -08 000000105 INF: Tilt Motor 3: Encoder: at motor step 3428 + 3/6
17-03-02 12:56:18.046 -08 000000105 INF: Tilt Motor 3: Moving to 21045 encoder counts
17-03-02 12:56:18.046 -08 000000105 INF: FPGA: Xmit T3MOVETO 21045\n
17-03-02 12:56:18.046 -08 000000057 INF: Tilt Motor 1: Encoder: at motor step 3325 + 4/6
17-03-02 12:56:18.046 -08 000000057 INF: Tilt Motor 1: Moving to 19674 encoder counts
17-03-02 12:56:18.047 -08 000000098 INF: Tilt Motor 2: Encoder: at motor step 3465 + 2/6
17-03-02 12:56:18.047 -08 000000098 INF: Tilt Motor 2: Moving to 21260 encoder counts
17-03-02 12:56:18.047 -08 000000098 INF: FPGA: Xmit T2MOVETO 21260\n
17-03-02 12:56:18.054 -08 000000057 INF: FPGA: Xmit T1MOVETO 19674\n
17-03-02 12:56:18.083 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:18.088 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-03-02 12:56:18.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:18.171 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:18.180 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:18.185 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-03-02 12:56:18.232 -08 000000071 INF: FPGA: Recv T1MOVETO 47
17-03-02 12:56:18.232 -08 000000057 INF: Tilt Motor 1: To move from 5.068 to 4.997 (-0.071 mm) should take 47 steps, but required 47 steps (0.072 mm). Slippage = 0.000 mm (0.00%)
17-03-02 12:56:18.232 -08 000000057 INF: FPGA: Xmit T1RD\n
17-03-02 12:56:18.269 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:18.294 -08 000000033 INF: FPGA: Recv T3MOVETO 78
17-03-02 12:56:18.294 -08 000000033 INF: FPGA: Recv T1RD 19675
17-03-02 12:56:18.294 -08 000000033 INF: FPGA: Recv T2MOVETO 77
17-03-02 12:56:18.294 -08 000000098 INF: Tilt Motor 2: To move from 5.281 to 5.400 (0.119 mm) should take 78 steps, but required 77 steps (0.117 mm). Slippage = -0.002 mm (-0.01%)
17-03-02 12:56:18.294 -08 000000105 INF: Tilt Motor 3: To move from 5.225 to 5.345 (0.120 mm) should take 79 steps, but required 78 steps (0.119 mm). Slippage = -0.002 mm (-0.01%)
17-03-02 12:56:18.294 -08 000000098 INF: FPGA: Xmit T2RD\n
17-03-02 12:56:18.294 -08 000000057 INF: Tilt Motor 1: Encoder: at motor step 3279 + 1/6
17-03-02 12:56:18.295 -08 000000105 INF: FPGA: Xmit T3RD\n
17-03-02 12:56:18.297 -08 000000057 INF: FPGA: Xmit T1RD\n
17-03-02 12:56:18.355 -08 000000036 INF: FPGA: Recv T2RD 21253
17-03-02 12:56:18.355 -08 000000036 INF: FPGA: Recv T3RD 21039
17-03-02 12:56:18.355 -08 000000036 INF: FPGA: Recv T1RD 19675
17-03-02 12:56:18.355 -08 000000057 INF: Tilt Motor 1: Encoder: at motor step 3279 + 1/6
17-03-02 12:56:18.355 -08 000000098 INF: Tilt Motor 2: Encoder: at motor step 3542 + 1/6
17-03-02 12:56:18.355 -08 000000105 INF: Tilt Motor 3: Encoder: at motor step 3506 + 3/6
17-03-02 12:56:18.355 -08 000000057 INF: FPGA: Xmit T1RD\n
17-03-02 12:56:18.358 -08 000000098 INF: FPGA: Xmit T2RD\n
17-03-02 12:56:18.359 -08 000000105 INF: FPGA: Xmit T3RD\n
17-03-02 12:56:18.421 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:18.421 -08 000000055 INF: FPGA: Recv T1RD 19675
17-03-02 12:56:18.421 -08 000000055 INF: FPGA: Recv T2RD 21252
17-03-02 12:56:18.421 -08 000000055 INF: FPGA: Recv T3RD 21039
17-03-02 12:56:18.421 -08 000000105 INF: Tilt Motor 3: Encoder: at motor step 3506 + 3/6
17-03-02 12:56:18.421 -08 000000057 INF: Tilt Motor 1: Encoder: at motor step 3279 + 1/6
17-03-02 12:56:18.421 -08 000000105 INF: FPGA: Xmit T3RD\n
17-03-02 12:56:18.421 -08 000000057 INF: Tilt Motor 1: After move to 4.9972, error = 0.0003, min/max error = -0.0017/0.0019, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:56:18.421 -08 000000098 INF: Tilt Motor 2: Encoder: at motor step 3542 + 0/6
17-03-02 12:56:18.421 -08 000000057 INF: Tilt Motor 1: Moved to 4.9975 after 437.4857 ms
17-03-02 12:56:18.421 -08 000000057 INF: ======================================
17-03-02 12:56:18.422 -08 000000098 INF: FPGA: Xmit T2RD\n
17-03-02 12:56:18.480 -08 000000108 INF: FPGA: Recv T3RD 21039
17-03-02 12:56:18.480 -08 000000108 INF: FPGA: Recv T2RD 21252
17-03-02 12:56:18.480 -08 000000098 INF: Tilt Motor 2: Encoder: at motor step 3542 + 0/6
17-03-02 12:56:18.480 -08 000000105 INF: Tilt Motor 3: Encoder: at motor step 3506 + 3/6
17-03-02 12:56:18.480 -08 000000098 INF: Tilt Motor 2: After move to 5.4000, error = -0.0020, min/max error = -0.0020/0.0017, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:56:18.480 -08 000000105 INF: Tilt Motor 3: After move to 5.3454, error = -0.0015, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:56:18.480 -08 000000098 INF: Tilt Motor 2: Moved to 5.3980 after 496.3795 ms
17-03-02 12:56:18.480 -08 000000105 INF: Tilt Motor 3: Moved to 5.3439 after 496.2742 ms
17-03-02 12:56:18.480 -08 000000098 INF: ======================================
17-03-02 12:56:18.481 -08 000000105 INF: ======================================
17-03-02 12:56:18.481 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:18.482 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:18.483 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:18.489 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-03-02 12:56:18.498 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-03-02 12:56:18.498 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-03-02 12:56:18.498 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-03-02 12:56:18.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:18.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:18.502 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-03-02 12:56:18.502 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-03-02 12:56:18.502 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-03-02 12:56:18.542 -08 000000072 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:18.543 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:18.543 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:56:18.543 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1524 mm
17-03-02 12:56:18.543 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-03-02 12:56:18.550 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-03-02 12:56:18.607 -08 000000110 INF: FPGA: Recv ZTRG 
17-03-02 12:56:18.607 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-03-02 12:56:18.668 -08 000000060 INF: FPGA: Recv ZYT 
17-03-02 12:56:18.668 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-03-02 12:56:18.668 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-03-02 12:56:18.731 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:18.733 -08 000000105 INF: FPGA: Recv @LOG Trigger Camera
17-03-02 12:56:18.733 -08 000000105 INF: FPGA: Recv ZMV 
17-03-02 12:56:18.733 -08 000000006 INF: FPGA: Trigger Camera
17-03-02 12:56:18.733 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.9483 ms
17-03-02 12:56:18.733 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-03-02 12:56:18.793 -08 000000115 INF: FPGA: Recv ZDACR 60292
17-03-02 12:56:18.793 -08 000000042 INF: Z Motor: MoveAndTrigger took 250.0417 ms w/comms
17-03-02 12:56:18.793 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:56:18.793 -08 000000042 INF: Z Motor: MoveAbsStepped took 250.2177 ms
17-03-02 12:56:18.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:18.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:18.794 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-03-02 12:56:18.803 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-03-02 12:56:18.803 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:56:18.803 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:56:18.803 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-03-02 12:56:18.803 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-03-02 12:56:18.855 -08 000000071 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:18.875 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:18.876 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-03-02 12:56:18.884 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-03-02 12:56:18.884 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:56:18.884 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:56:18.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:18.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-03-02 12:56:18.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:18.887 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1
17-03-02 12:56:18.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:18.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:18.889 -08 000000110 INF: ===================Move X,Y===================
17-03-02 12:56:18.889 -08 000000096 INF: ===================MoveEmissionFilters===================
17-03-02 12:56:18.890 -08 000000110 INF: ===================Move X,Y, Parallel===================
17-03-02 12:56:18.891 -08 000000039 INF: ===================Move X Motor without settling===================
17-03-02 12:56:18.891 -08 000000039 INF: X Motor: Xmit PR VM\n
17-03-02 12:56:18.891 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:18.891 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:18.891 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:18.891 -08 000000034 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:18.892 -08 000000072 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:18.892 -08 000000034 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9210 mm
17-03-02 12:56:18.892 -08 000000034 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:18.892 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:18.892 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:18.892 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:18.892 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:18.892 -08 000000072 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:18.893 -08 000000097 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:56:18.893 -08 000000115 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:56:18.893 -08 000000050 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:56:18.893 -08 000000097 INF: ======================================
17-03-02 12:56:18.893 -08 000000009 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:56:18.894 -08 000000135 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:56:18.894 -08 000000050 INF: ======================================
17-03-02 12:56:18.894 -08 000000083 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:56:18.894 -08 000000138 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:56:18.895 -08 000000083 INF: ======================================
17-03-02 12:56:18.895 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:18.895 -08 000000138 INF: ======================================
17-03-02 12:56:18.895 -08 000000097 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:56:18.896 -08 000000097 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:56:18.896 -08 000000135 INF: ======================================
17-03-02 12:56:18.896 -08 000000097 INF: ======================================
17-03-02 12:56:18.896 -08 000000115 INF: ======================================
17-03-02 12:56:18.896 -08 000000092 INF: ======================================
17-03-02 12:56:18.897 -08 000000009 INF: ======================================
17-03-02 12:56:18.898 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:18.898 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:18.898 -08 000000072 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:18.899 -08 000000068 INF: ======================================
17-03-02 12:56:18.899 -08 000000057 INF: ======================================
17-03-02 12:56:18.899 -08 000000072 INF: ======================================
17-03-02 12:56:18.900 -08 000000096 INF: ======================================
17-03-02 12:56:18.921 -08 000000034 INF: Y Motor: Recv ok\r
17-03-02 12:56:18.921 -08 000000034 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:18.921 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:18.983 -08 000000039 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:56:18.983 -08 000000039 INF: X Motor: Xmit PR VI\n
17-03-02 12:56:18.984 -08 000000034 INF: Y Motor: Recv ok\r
17-03-02 12:56:18.984 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:19.044 -08 000000034 INF: Y Motor: Recv v 0\r
17-03-02 12:56:19.044 -08 000000039 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:56:19.044 -08 000000039 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:56:19.044 -08 000000034 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:19.044 -08 000000039 INF: X Motor: Moving to 71.9506 mm @15.000 mm/sec, started at 69.6982 mm
17-03-02 12:56:19.044 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:19.044 -08 000000034 INF: Y Motor: Set target position to 5953351 encoder counts
17-03-02 12:56:19.044 -08 000000034 INF: Y Motor: Xmit s r0xca 5953351\r
17-03-02 12:56:19.044 -08 000000039 INF: X Motor: Xmit MA 5305\n
17-03-02 12:56:19.105 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:19.106 -08 000000034 INF: Y Motor: Recv ok\r
17-03-02 12:56:19.106 -08 000000039 INF: X Motor: Recv MA 5305\r\n>
17-03-02 12:56:19.106 -08 000000034 INF: Y Motor: Start the move command
17-03-02 12:56:19.106 -08 000000034 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:19.106 -08 000000039 INF: X Motor: WaitUntilStopped 60150
17-03-02 12:56:19.168 -08 000000034 INF: Y Motor: Recv ok\r
17-03-02 12:56:19.168 -08 000000034 INF: Y Motor: WaitUntilStopped 61985
17-03-02 12:56:19.168 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:19.294 -08 000000034 INF: Y Motor: Unshifted Position: 1076179
17-03-02 12:56:19.344 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:19.355 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:19.418 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:19.469 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:19.618 -08 000000034 INF: Y Motor: Unshifted Position: 1787079
17-03-02 12:56:19.668 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:19.668 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:19.670 -08 000000039 INF: X Motor: Xmit PR ER\n
17-03-02 12:56:19.731 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:19.732 -08 000000039 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:56:19.732 -08 000000039 INF: X Motor: Moved to 71.9517 after 625 ms
17-03-02 12:56:19.732 -08 000000039 INF: ======================================
17-03-02 12:56:19.782 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:19.919 -08 000000034 INF: Y Motor: Unshifted Position: 2562110
17-03-02 12:56:19.969 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:19.981 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:20.042 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:20.093 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:20.229 -08 000000034 INF: Y Motor: Unshifted Position: 3342071
17-03-02 12:56:20.279 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:20.292 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:20.355 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:20.406 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:20.541 -08 000000034 INF: Y Motor: Unshifted Position: 4125466
17-03-02 12:56:20.591 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:20.605 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:20.665 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:20.716 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:20.853 -08 000000034 INF: Y Motor: Unshifted Position: 4907910
17-03-02 12:56:20.903 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:20.915 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:20.978 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:21.030 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:21.165 -08 000000034 INF: Y Motor: Unshifted Position: 5682065
17-03-02 12:56:21.215 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:21.228 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:21.292 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:21.343 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:21.478 -08 000000034 INF: Y Motor: Unshifted Position: 5953353
17-03-02 12:56:21.478 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:21.478 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:21.541 -08 000000034 INF: Y Motor: Recv v 0\r
17-03-02 12:56:21.541 -08 000000034 INF: Y Motor: Moved to 64.5335 after 2372 ms
17-03-02 12:56:21.541 -08 000000034 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:21.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:21.602 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:21.603 -08 000000034 INF: Y Motor: Recv v 4096\r
17-03-02 12:56:21.603 -08 000000034 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:21.603 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:21.665 -08 000000034 INF: Y Motor: Recv v 0\r
17-03-02 12:56:21.665 -08 000000034 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:21.665 -08 000000034 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:21.730 -08 000000034 INF: Y Motor: Recv v 402653184\r
17-03-02 12:56:21.730 -08 000000034 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:56:21.730 -08 000000034 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:21.730 -08 000000034 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:21.790 -08 000000034 INF: Y Motor: Recv v 0\r
17-03-02 12:56:21.790 -08 000000034 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:21.790 -08 000000034 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:21.790 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:21.852 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:21.855 -08 000000034 INF: Y Motor: Recv ok\r
17-03-02 12:56:21.855 -08 000000034 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:21.855 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:21.917 -08 000000034 INF: Y Motor: Recv ok\r
17-03-02 12:56:21.917 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:21.917 -08 000000034 INF: ======================================
17-03-02 12:56:21.919 -08 000000110 INF: ===================Move X,Y===================
17-03-02 12:56:21.920 -08 000000110 INF: ======================================
17-03-02 12:56:21.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:21.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:21.922 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-03-02 12:56:21.922 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-03-02 12:56:21.978 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:56:21.978 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-03-02 12:56:22.038 -08 000000122 INF: FPGA: Recv ZFREQCL
17-03-02 12:56:22.039 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:56:22.039 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:22.039 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:22.102 -08 000000075 INF: FPGA: Recv TDIYERD 6453353
17-03-02 12:56:22.102 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-03-02 12:56:22.103 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:22.103 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:22.104 -08 000000030 INF: ===================TDI Scan Setup===================
17-03-02 12:56:22.104 -08 000000071 INF: ===================Set YMotor gains for scans===================
17-03-02 12:56:22.105 -08 000000030 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:56:22.105 -08 000000071 INF: ======================================
17-03-02 12:56:22.105 -08 000000030 INF: ===================TDI Scan Setup===================
17-03-02 12:56:22.107 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:56:22.107 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:56:22.107 -08 000000030 INF: FPGA: Xmit TDIYPOS 6433351\n
17-03-02 12:56:22.164 -08 000000100 INF: FPGA: Recv TDIYPOS
17-03-02 12:56:22.164 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:56:22.166 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:56:22.166 -08 000000030 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-03-02 12:56:22.167 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:22.226 -08 000000097 INF: FPGA: Recv TDIYARM2
17-03-02 12:56:22.227 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:56:22.227 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:22.228 -08 000000030 INF: ===================TDI Scan Setup===================
17-03-02 12:56:22.229 -08 000000030 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:56:22.230 -08 000000030 INF: ===================TDI Scan Setup===================
17-03-02 12:56:22.231 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-03-02 12:56:22.232 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:56:22.233 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:22.477 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:22.539 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:22.598 -08 000000030 INF: Camera #0 AttachBuffer (imageDataPtr = 69126516224 imgPtr = 69126516224 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-03-02 12:56:22.599 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-03-02 12:56:22.599 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:22.614 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:56:22.616 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:22.789 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:22.852 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:22.998 -08 000000030 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53833692544 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-03-02 12:56:22.999 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-03-02 12:56:22.999 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:23.014 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:56:23.016 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-03-02 12:56:23.017 -08 000000030 INF: ===================TDI Scan Setup===================
17-03-02 12:56:23.019 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:23.020 -08 000000030 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:56:23.020 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:23.022 -08 000000030 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:56:23.022 -08 000000030 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:56:23.022 -08 000000030 INF: Z Motor: Arming to move to -0.0100 mm
17-03-02 12:56:23.022 -08 000000030 INF: FPGA: Xmit ZYT 0 2\n
17-03-02 12:56:23.036 -08 000000055 INF: FPGA: Recv ZYT 
17-03-02 12:56:23.036 -08 000000030 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-03-02 12:56:23.036 -08 000000030 INF: FPGA: Xmit ZARM 2621\n
17-03-02 12:56:23.098 -08 000000135 INF: FPGA: Recv ZARM
17-03-02 12:56:23.098 -08 000000030 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9036 ms
17-03-02 12:56:23.098 -08 000000030 INF: Z Motor: ArmAbsStepped took 76.226 ms
17-03-02 12:56:23.098 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:23.100 -08 000000030 INF: ===================TDI Scan Setup===================
17-03-02 12:56:23.101 -08 000000030 INF: ======================================
17-03-02 12:56:23.102 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:23.102 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:23.103 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:23.104 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:23.104 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:23.105 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:23.106 -08 000000100 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:56:23.106 -08 000000096 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:56:23.106 -08 000000100 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:56:23.106 -08 000000100 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:56:23.106 -08 000000100 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:56:23.106 -08 000000096 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:56:23.106 -08 000000100 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:56:23.106 -08 000000096 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:56:23.106 -08 000000096 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:56:23.107 -08 000000096 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:56:23.163 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:23.413 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:23.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:23.535 -08 000000036 INF: FPGA: Recv EX2MV
17-03-02 12:56:23.535 -08 000000036 INF: FPGA: Recv EX1MV
17-03-02 12:56:23.535 -08 000000096 INF: Excitation Filter 1: Moved -107 steps in 428.9437 ms
17-03-02 12:56:23.535 -08 000000096 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.2319 ms
17-03-02 12:56:23.535 -08 000000096 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.3064 ms
17-03-02 12:56:23.535 -08 000000100 INF: Excitation Filter 2: Moved -107 steps in 429.1855 ms
17-03-02 12:56:23.535 -08 000000100 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 429.606 ms
17-03-02 12:56:23.535 -08 000000100 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 429.6858 ms
17-03-02 12:56:23.536 -08 000000096 INF: ======================================
17-03-02 12:56:23.536 -08 000000100 INF: ======================================
17-03-02 12:56:23.537 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:23.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:23.539 -08 000000091 INF: ===================Serial===================
17-03-02 12:56:23.539 -08 000000111 INF: ===================Camera TDI===================
17-03-02 12:56:23.540 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:23.540 -08 000000044 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:23.540 -08 000000044 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-03-02 12:56:23.540 -08 000000044 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:23.540 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:23.540 -08 000000091 INF: ===================Serial, FPGA Z Wait===================
17-03-02 12:56:23.540 -08 000000111 INF: ===================Camera TDI, Parallel===================
17-03-02 12:56:23.540 -08 000000050 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:56:23.541 -08 000000091 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:56:23.541 -08 000000131 INF: ===================Camera TDI===================
17-03-02 12:56:23.541 -08 000000135 INF: ===================Camera TDI===================
17-03-02 12:56:23.542 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:23.542 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:23.543 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:23.543 -08 000000050 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:56:23.543 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:23.601 -08 000000044 INF: Y Motor: Recv ok\r
17-03-02 12:56:23.601 -08 000000044 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:23.601 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:23.663 -08 000000044 INF: Y Motor: Recv ok\r
17-03-02 12:56:23.663 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:23.692 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:23.692 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:23.694 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:23.694 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:23.724 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:23.725 -08 000000044 INF: Y Motor: Recv v 0\r
17-03-02 12:56:23.725 -08 000000044 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:23.725 -08 000000044 INF: Y Motor: Set target position to 5797042 encoder counts
17-03-02 12:56:23.725 -08 000000044 INF: Y Motor: Xmit s r0xca 5797042\r
17-03-02 12:56:23.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:23.787 -08 000000044 INF: Y Motor: Recv ok\r
17-03-02 12:56:23.787 -08 000000044 INF: Y Motor: Start the move command
17-03-02 12:56:23.787 -08 000000044 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:23.842 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:23.842 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:23.844 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:23.844 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:23.851 -08 000000044 INF: Y Motor: Recv ok\r
17-03-02 12:56:23.851 -08 000000044 INF: Y Motor: WaitUntilStopped 61042
17-03-02 12:56:23.851 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:23.975 -08 000000044 INF: Y Motor: Unshifted Position: 5935034
17-03-02 12:56:23.992 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:23.992 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:23.994 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:23.994 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:24.025 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:24.036 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:24.100 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:24.142 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-03-02 12:56:24.142 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-03-02 12:56:24.142 -08 000000131 INF: ===================Camera #2 Frame #1===================
17-03-02 12:56:24.144 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-03-02 12:56:24.144 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-03-02 12:56:24.144 -08 000000135 INF: ===================Camera #0 Frame #1===================
17-03-02 12:56:24.151 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:24.288 -08 000000044 INF: Y Motor: Unshifted Position: 5888382
17-03-02 12:56:24.295 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-03-02 12:56:24.295 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-03-02 12:56:24.295 -08 000000131 INF: ===================Camera #2 Frame #3===================
17-03-02 12:56:24.297 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-03-02 12:56:24.297 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-03-02 12:56:24.297 -08 000000135 INF: ===================Camera #0 Frame #3===================
17-03-02 12:56:24.338 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:24.350 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:24.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:24.452 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:56:24.452 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:56:24.452 -08 000000131 INF: ===================Camera #2 Frame #4===================
17-03-02 12:56:24.453 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:56:24.453 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:56:24.453 -08 000000135 INF: ===================Camera #0 Frame #4===================
17-03-02 12:56:24.462 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:24.598 -08 000000044 INF: Y Motor: Unshifted Position: 5841525
17-03-02 12:56:24.605 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:56:24.605 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:56:24.605 -08 000000131 INF: ===================Camera #2 Frame #5===================
17-03-02 12:56:24.606 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:56:24.606 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:56:24.606 -08 000000135 INF: ===================Camera #0 Frame #5===================
17-03-02 12:56:24.648 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:24.658 -08 000000110 INF: FPGA: Recv ZWAIT 
17-03-02 12:56:24.658 -08 000000091 INF: ===================Serial===================
17-03-02 12:56:24.660 -08 000000091 INF: ===================Serial, Confirm position Z Motor===================
17-03-02 12:56:24.661 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:24.661 -08 000000091 INF: ===================Serial===================
17-03-02 12:56:24.662 -08 000000091 INF: ======================================
17-03-02 12:56:24.723 -08 000000055 INF: FPGA: Recv TDIYWAIT
17-03-02 12:56:24.723 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:24.724 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:24.725 -08 000000050 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:56:24.726 -08 000000073 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:56:24.726 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:56:24.726 -08 000000073 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:56:24.726 -08 000000073 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:56:24.726 -08 000000073 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:56:24.726 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:56:24.726 -08 000000073 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:56:24.726 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:56:24.726 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:56:24.727 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:56:24.758 -08 000000131 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-03-02 12:56:24.758 -08 000000131 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-03-02 12:56:24.758 -08 000000131 INF: ===================Camera #2 Frame #6===================
17-03-02 12:56:24.759 -08 000000135 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-03-02 12:56:24.759 -08 000000135 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-03-02 12:56:24.759 -08 000000135 INF: ===================Camera #0 Frame #6===================
17-03-02 12:56:24.761 -08 000000131 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-03-02 12:56:24.762 -08 000000131 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:24.762 -08 000000135 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-03-02 12:56:24.763 -08 000000135 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:24.775 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:24.786 -08 000000131 INF: Camera #2 ReleaseBuffer
17-03-02 12:56:24.786 -08 000000131 INF: ===================Camera TDI===================
17-03-02 12:56:24.787 -08 000000131 INF: ======================================
17-03-02 12:56:24.809 -08 000000135 INF: Camera #0 ReleaseBuffer
17-03-02 12:56:24.809 -08 000000135 INF: ===================Camera TDI===================
17-03-02 12:56:24.810 -08 000000135 INF: ======================================
17-03-02 12:56:24.811 -08 000000111 INF: ===================Camera TDI===================
17-03-02 12:56:24.813 -08 000000111 INF: ======================================
17-03-02 12:56:24.912 -08 000000044 INF: Y Motor: Unshifted Position: 5797056
17-03-02 12:56:24.962 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:24.974 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:25.035 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:25.096 -08 000000088 INF: FPGA: Recv EX1MV
17-03-02 12:56:25.096 -08 000000088 INF: FPGA: Recv EX2MV
17-03-02 12:56:25.096 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 369.7374 ms
17-03-02 12:56:25.096 -08 000000073 INF: Excitation Filter 1: Moved 107 steps in 369.9507 ms
17-03-02 12:56:25.096 -08 000000073 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.0678 ms
17-03-02 12:56:25.096 -08 000000073 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.1385 ms
17-03-02 12:56:25.096 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.9089 ms
17-03-02 12:56:25.096 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.1122 ms
17-03-02 12:56:25.097 -08 000000010 INF: ======================================
17-03-02 12:56:25.097 -08 000000073 INF: ======================================
17-03-02 12:56:25.098 -08 000000044 INF: Y Motor: Unshifted Position: 5797042
17-03-02 12:56:25.098 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:25.098 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:25.098 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:25.099 -08 000000050 INF: ======================================
17-03-02 12:56:25.160 -08 000000044 INF: Y Motor: Recv v 0\r
17-03-02 12:56:25.160 -08 000000044 INF: Y Motor: Moved to 62.9704 after 1308 ms
17-03-02 12:56:25.160 -08 000000044 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:25.222 -08 000000044 INF: Y Motor: Recv v 4097\r
17-03-02 12:56:25.222 -08 000000044 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:25.222 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:25.284 -08 000000044 INF: Y Motor: Recv v 0\r
17-03-02 12:56:25.284 -08 000000044 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:25.284 -08 000000044 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:25.285 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:25.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:25.348 -08 000000044 INF: Y Motor: Recv v 134217728\r
17-03-02 12:56:25.348 -08 000000044 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:56:25.348 -08 000000044 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:25.348 -08 000000044 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:25.410 -08 000000044 INF: Y Motor: Recv v 0\r
17-03-02 12:56:25.410 -08 000000044 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:25.410 -08 000000044 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:25.410 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:25.474 -08 000000044 INF: Y Motor: Recv ok\r
17-03-02 12:56:25.474 -08 000000044 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:25.474 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:25.536 -08 000000044 INF: Y Motor: Recv ok\r
17-03-02 12:56:25.536 -08 000000044 INF: ======================================
17-03-02 12:56:25.537 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:25.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:25.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:25.540 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:56:25.595 -08 000000075 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:56:25.595 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:25.597 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:25.658 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:25.659 -08 000000098 INF: FPGA: Recv TDIYERD 6297044
17-03-02 12:56:25.660 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:56:25.720 -08 000000044 INF: FPGA: Recv ZADCR 2425
17-03-02 12:56:25.720 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-03-02 12:56:25.720 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:56:25.784 -08 000000033 INF: FPGA: Recv TDIPULSES 3073
17-03-02 12:56:25.784 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-03-02 12:56:25.784 -08 000000042 INF: TDIScan finished after 6907.5896 ms
17-03-02 12:56:25.784 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-03-02 12:56:25.784 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-03-02 12:56:25.784 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:56:25.846 -08 000000056 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:56:25.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:25.848 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:25.849 -08 000000034 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:56:25.849 -08 000000132 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:56:25.849 -08 000000055 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:56:25.849 -08 000000132 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:56:25.849 -08 000000132 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:56:25.849 -08 000000034 INF: ======================================
17-03-02 12:56:25.849 -08 000000055 INF: ======================================
17-03-02 12:56:25.908 -08 000000132 INF: Y Motor: Recv ok\r
17-03-02 12:56:25.908 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:25.908 -08 000000132 INF: ======================================
17-03-02 12:56:25.909 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:25.910 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:25.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:56:25.940 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:25.940 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:56:25.969 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:25.969 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:56:25.972 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:25.972 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:25.972 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:25.973 -08 000000018 INF: WaitCommand(5000) start
17-03-02 12:56:25.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left===================
17-03-02 12:56:25.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:25.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:56:26.024 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:26.025 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:26.025 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:26.026 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-03-02 12:56:26.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:26.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-03-02 12:56:26.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-03-02 12:56:26.799 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-03-02 12:56:26.824 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0845382645947933Best Z position at top surface = -0.155597100053233Best Z position at top surface + compensator offset = -0.132897100053233 C:161,L:2,T
17-03-02 12:56:26.826 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.155597100053233
17-03-02 12:56:26.826 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.95555
17-03-02 12:56:26.826 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0845382645947933
17-03-02 12:56:26.826 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.61364
17-03-02 12:56:26.826 -08 000000042 INF: Z-height at LaneTopSurface is -0.155597100053233.
17-03-02 12:56:26.826 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:26.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:26.973 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:56:26.973 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:56:26.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left===================
17-03-02 12:56:27.030 -08 000000096 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:27.030 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-03-02 12:56:27.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.032 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543
17-03-02 12:56:27.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.034 -08 000000071 INF: ===================Move Tilt Motor 1===================
17-03-02 12:56:27.034 -08 000000010 INF: ===================Move Tilt Motor 2===================
17-03-02 12:56:27.034 -08 000000028 INF: ===================Move Tilt Motor 3===================
17-03-02 12:56:27.034 -08 000000071 INF: ======================================
17-03-02 12:56:27.034 -08 000000028 INF: Tilt Motor 3: Moving to 5.3454 mm, started at 5.3439 mm, delta = 0.0015 mm
17-03-02 12:56:27.034 -08 000000028 INF: FPGA: Xmit T3RD\n
17-03-02 12:56:27.034 -08 000000010 INF: Tilt Motor 2: Moving to 5.4000 mm, started at 5.3980 mm, delta = 0.0020 mm
17-03-02 12:56:27.037 -08 000000010 INF: FPGA: Xmit T2RD\n
17-03-02 12:56:27.092 -08 000000092 INF: FPGA: Recv T3RD 21038
17-03-02 12:56:27.092 -08 000000092 INF: FPGA: Recv T2RD 21252
17-03-02 12:56:27.092 -08 000000010 INF: Tilt Motor 2: Encoder: at motor step 3542 + 0/6
17-03-02 12:56:27.092 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3506 + 2/6
17-03-02 12:56:27.092 -08 000000010 INF: Tilt Motor 2: Moving to 21260 encoder counts
17-03-02 12:56:27.092 -08 000000010 INF: FPGA: Xmit T2MOVETO 21260\n
17-03-02 12:56:27.092 -08 000000028 INF: Tilt Motor 3: Moving to 21045 encoder counts
17-03-02 12:56:27.093 -08 000000028 INF: FPGA: Xmit T3MOVETO 21045\n
17-03-02 12:56:27.219 -08 000000061 INF: FPGA: Recv T2MOVETO 1
17-03-02 12:56:27.219 -08 000000061 INF: FPGA: Recv T3MOVETO 1
17-03-02 12:56:27.219 -08 000000028 INF: Tilt Motor 3: To move from 5.344 to 5.345 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-03-02 12:56:27.219 -08 000000010 INF: Tilt Motor 2: To move from 5.398 to 5.400 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-03-02 12:56:27.219 -08 000000028 INF: FPGA: Xmit T3RD\n
17-03-02 12:56:27.220 -08 000000010 INF: FPGA: Xmit T2RD\n
17-03-02 12:56:27.281 -08 000000111 INF: FPGA: Recv T3RD 21045
17-03-02 12:56:27.281 -08 000000111 INF: FPGA: Recv T2RD 21260
17-03-02 12:56:27.281 -08 000000010 INF: Tilt Motor 2: Encoder: at motor step 3543 + 2/6
17-03-02 12:56:27.281 -08 000000010 INF: FPGA: Xmit T2RD\n
17-03-02 12:56:27.281 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3507 + 3/6
17-03-02 12:56:27.282 -08 000000028 INF: FPGA: Xmit T3RD\n
17-03-02 12:56:27.343 -08 000000100 INF: FPGA: Recv T2RD 21260
17-03-02 12:56:27.343 -08 000000100 INF: FPGA: Recv T3RD 21045
17-03-02 12:56:27.343 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3507 + 3/6
17-03-02 12:56:27.343 -08 000000028 INF: FPGA: Xmit T3RD\n
17-03-02 12:56:27.343 -08 000000010 INF: Tilt Motor 2: Encoder: at motor step 3543 + 2/6
17-03-02 12:56:27.344 -08 000000010 INF: FPGA: Xmit T2RD\n
17-03-02 12:56:27.405 -08 000000078 INF: FPGA: Recv T3RD 21045
17-03-02 12:56:27.405 -08 000000078 INF: FPGA: Recv T2RD 21260
17-03-02 12:56:27.405 -08 000000010 INF: Tilt Motor 2: Encoder: at motor step 3543 + 2/6
17-03-02 12:56:27.405 -08 000000010 INF: Tilt Motor 2: After move to 5.4000, error = 0.0000, min/max error = -0.0020/0.0017, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:56:27.405 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3507 + 3/6
17-03-02 12:56:27.405 -08 000000028 INF: Tilt Motor 3: After move to 5.3454, error = 0.0000, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:56:27.405 -08 000000010 INF: Tilt Motor 2: Moved to 5.4000 after 370.5517 ms
17-03-02 12:56:27.405 -08 000000028 INF: Tilt Motor 3: Moved to 5.3454 after 370.7418 ms
17-03-02 12:56:27.405 -08 000000028 INF: ======================================
17-03-02 12:56:27.406 -08 000000010 INF: ======================================
17-03-02 12:56:27.407 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.408 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.408 -08 000000042 INF: ETF Best Z: -0.1328971 mm (34838 DAC)
17-03-02 12:56:27.409 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.410 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.410 -08 000000042 INF: Compensator: Moving IntoPath
17-03-02 12:56:27.410 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-03-02 12:56:27.984 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:27.984 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left===================
17-03-02 12:56:27.986 -08 000000122 INF: FPGA: Recv MIOCOMPF
17-03-02 12:56:27.986 -08 000000042 INF: Compensator: Moved IntoPath in 577 ms
17-03-02 12:56:27.987 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.988 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:27.994 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39664, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-03-02 12:56:27.994 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50464, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-03-02 12:56:28.001 -08 000000042 INF: Swath 0: Converted transform from (-54.45015, 53.40199) pixels to (-0.01863, 0.018285) mm.
17-03-02 12:56:28.007 -08 000000042 INF: Swath 1: Converted transform from (-64.34515, 51.79964) pixels to (-0.02208, 0.01794) mm.
17-03-02 12:56:28.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-03-02 12:56:28.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-03-02 12:56:28.008 -08 000000042 INF: Transformed XStagePosition from 71.39664 mm to 71.3780069630593 mm.
17-03-02 12:56:28.020 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5713743561655 mm.
17-03-02 12:56:28.020 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3713743561655 mm.
17-03-02 12:56:28.020 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4621243561655 mm.
17-03-02 12:56:28.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:28.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-03-02 12:56:28.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:28.023 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-03-02 12:56:28.029 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:28.029 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:28.030 -08 000000115 INF: ===================MoveEmissionFilters===================
17-03-02 12:56:28.030 -08 000000138 INF: ===================Move X,Y===================
17-03-02 12:56:28.030 -08 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:28.031 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:28.031 -08 000000098 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:28.031 -08 000000136 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:28.031 -08 000000111 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:28.031 -08 000000138 INF: ===================Move X,Y, Parallel===================
17-03-02 12:56:28.032 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:28.032 -08 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-03-02 12:56:28.032 -08 000000136 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:28.032 -08 000000055 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:56:28.032 -08 000000055 INF: Z Motor: Moving to -0.1529 mm, started at -0.0100 mm
17-03-02 12:56:28.032 -08 000000092 INF: ===================Move X Motor without settling===================
17-03-02 12:56:28.032 -08 000000033 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:28.032 -08 000000055 INF: FPGA: Xmit ZTRG 0\n
17-03-02 12:56:28.032 -08 000000111 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:28.033 -08 000000033 INF: Y Motor: Moving to 64.5714 mm @25.000 mm/sec, started at 62.9704 mm
17-03-02 12:56:28.033 -08 000000033 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:28.033 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:28.033 -08 000000129 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:56:28.033 -08 000000045 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:56:28.033 -08 000000098 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:28.033 -08 000000116 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:56:28.033 -08 000000129 INF: ======================================
17-03-02 12:56:28.033 -08 000000044 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:56:28.033 -08 000000078 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:56:28.033 -08 000000039 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:56:28.034 -08 000000078 INF: ======================================
17-03-02 12:56:28.034 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:56:28.034 -08 000000116 INF: ======================================
17-03-02 12:56:28.034 -08 000000096 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:56:28.034 -08 000000044 INF: ======================================
17-03-02 12:56:28.034 -08 000000010 INF: ======================================
17-03-02 12:56:28.035 -08 000000096 INF: ======================================
17-03-02 12:56:28.035 -08 000000039 INF: ======================================
17-03-02 12:56:28.035 -08 000000111 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:28.035 -08 000000092 INF: X Motor: Xmit PR VM\n
17-03-02 12:56:28.035 -08 000000136 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:28.036 -08 000000098 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:28.036 -08 000000045 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:56:28.036 -08 000000045 INF: ======================================
17-03-02 12:56:28.036 -08 000000111 INF: ======================================
17-03-02 12:56:28.037 -08 000000136 INF: ======================================
17-03-02 12:56:28.037 -08 000000098 INF: ======================================
17-03-02 12:56:28.037 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:28.039 -08 000000095 INF: ======================================
17-03-02 12:56:28.040 -08 000000115 INF: ======================================
17-03-02 12:56:28.107 -08 000000050 INF: FPGA: Recv ZTRG 
17-03-02 12:56:28.107 -08 000000055 INF: FPGA: Xmit ZYT 0 3\n
17-03-02 12:56:28.109 -08 000000033 INF: Y Motor: Recv ok\r
17-03-02 12:56:28.109 -08 000000033 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:28.109 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:28.109 -08 000000092 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:56:28.109 -08 000000092 INF: X Motor: Xmit PR VI\n
17-03-02 12:56:28.169 -08 000000097 INF: FPGA: Recv ZYT 
17-03-02 12:56:28.169 -08 000000055 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-03-02 12:56:28.169 -08 000000055 INF: FPGA: Xmit ZMV 40080\n
17-03-02 12:56:28.171 -08 000000033 INF: Y Motor: Recv ok\r
17-03-02 12:56:28.171 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:28.171 -08 000000092 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:56:28.171 -08 000000092 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:56:28.171 -08 000000092 INF: X Motor: Moving to 71.3780 mm @15.000 mm/sec, started at 71.9517 mm
17-03-02 12:56:28.171 -08 000000092 INF: X Motor: Xmit MA 5070\n
17-03-02 12:56:28.231 -08 000000136 INF: FPGA: Recv @LOG Trigger Camera
17-03-02 12:56:28.231 -08 000000006 INF: FPGA: Trigger Camera
17-03-02 12:56:28.233 -08 000000033 INF: Y Motor: Recv v 0\r
17-03-02 12:56:28.233 -08 000000092 INF: X Motor: Recv MA 5070\r\n>
17-03-02 12:56:28.233 -08 000000033 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:28.233 -08 000000092 INF: X Motor: WaitUntilStopped 60038
17-03-02 12:56:28.233 -08 000000033 INF: Y Motor: Set target position to 5957137 encoder counts
17-03-02 12:56:28.233 -08 000000033 INF: Y Motor: Xmit s r0xca 5957137\r
17-03-02 12:56:28.295 -08 000000033 INF: Y Motor: Recv ok\r
17-03-02 12:56:28.295 -08 000000033 INF: Y Motor: Start the move command
17-03-02 12:56:28.295 -08 000000033 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:28.355 -08 000000105 INF: FPGA: Recv ZMV 
17-03-02 12:56:28.355 -08 000000055 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.7572 ms
17-03-02 12:56:28.355 -08 000000055 INF: FPGA: Xmit ZDACR\n
17-03-02 12:56:28.357 -08 000000033 INF: Y Motor: Recv ok\r
17-03-02 12:56:28.357 -08 000000033 INF: Y Motor: WaitUntilStopped 60064
17-03-02 12:56:28.357 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:28.420 -08 000000104 INF: FPGA: Recv ZDACR 40080
17-03-02 12:56:28.420 -08 000000055 INF: Z Motor: MoveAndTrigger took 387.9568 ms w/comms
17-03-02 12:56:28.420 -08 000000055 INF: Z Motor: After move to -0.1529, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:56:28.420 -08 000000055 INF: Z Motor: MoveAbsStepped took 388.1606 ms
17-03-02 12:56:28.421 -08 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:28.422 -08 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-03-02 12:56:28.423 -08 000000112 INF: ===================TDI Scan Setup===================
17-03-02 12:56:28.423 -08 000000108 INF: ===================Camera Arm TDI===================
17-03-02 12:56:28.424 -08 000000112 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:28.424 -08 000000108 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:28.425 -08 000000112 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:56:28.425 -08 000000108 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:28.425 -08 000000112 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:28.425 -08 000000112 INF: FPGA: Xmit ZSEL 3\n
17-03-02 12:56:28.482 -08 000000029 INF: FPGA: Recv ZSEL 
17-03-02 12:56:28.483 -08 000000112 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:28.483 -08 000000112 INF: FPGA: Xmit TDIBB 1\n
17-03-02 12:56:28.484 -08 000000033 INF: Y Motor: Unshifted Position: 5882301
17-03-02 12:56:28.534 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:28.544 -08 000000054 INF: FPGA: Recv TDIBB
17-03-02 12:56:28.544 -08 000000112 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:28.545 -08 000000112 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:56:28.546 -08 000000112 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:28.548 -08 000000112 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-03-02 12:56:28.548 -08 000000112 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-03-02 12:56:28.548 -08 000000112 INF: FPGA: Xmit ZSTEP 1792263\n
17-03-02 12:56:28.606 -08 000000098 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:28.606 -08 000000112 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:28.608 -08 000000112 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:56:28.608 -08 000000112 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:28.610 -08 000000112 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:56:28.610 -08 000000112 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:56:28.610 -08 000000112 INF: Z Motor: Arming to move to -0.1129 mm
17-03-02 12:56:28.610 -08 000000112 INF: FPGA: Xmit ZYT 6437137 4\n
17-03-02 12:56:28.658 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:28.668 -08 000000095 INF: FPGA: Recv ZYT 
17-03-02 12:56:28.668 -08 000000112 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382301 enc / 63.823 mm / ) = 6437137 enc / 64.371 mm
17-03-02 12:56:28.668 -08 000000112 INF: FPGA: Xmit ZARM 29595\n
17-03-02 12:56:28.670 -08 000000092 INF: X Motor: Xmit PR ER\n
17-03-02 12:56:28.730 -08 000000110 INF: FPGA: Recv ZARM
17-03-02 12:56:28.730 -08 000000112 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9526 ms
17-03-02 12:56:28.730 -08 000000112 INF: Z Motor: ArmAbsStepped took 119.4942 ms
17-03-02 12:56:28.730 -08 000000112 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:28.732 -08 000000092 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:56:28.732 -08 000000092 INF: X Motor: Moved to 71.3779 after 499 ms
17-03-02 12:56:28.732 -08 000000112 INF: ===================TDI Scan Setup===================
17-03-02 12:56:28.732 -08 000000092 INF: ======================================
17-03-02 12:56:28.733 -08 000000112 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:56:28.734 -08 000000112 INF: ===================TDI Scan Setup===================
17-03-02 12:56:28.735 -08 000000112 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:56:28.736 -08 000000112 INF: ===================TDI Scan Setup===================
17-03-02 12:56:28.737 -08 000000112 INF: ======================================
17-03-02 12:56:28.794 -08 000000033 INF: Y Motor: Unshifted Position: 5957139
17-03-02 12:56:28.794 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:28.794 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:28.859 -08 000000033 INF: Y Motor: Recv v 0\r
17-03-02 12:56:28.859 -08 000000033 INF: Y Motor: Moved to 64.5714 after 502 ms
17-03-02 12:56:28.859 -08 000000033 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:28.921 -08 000000033 INF: Y Motor: Recv v 4096\r
17-03-02 12:56:28.921 -08 000000033 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:28.921 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:28.983 -08 000000033 INF: Y Motor: Recv v 0\r
17-03-02 12:56:28.983 -08 000000033 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:28.983 -08 000000033 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:28.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:28.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left===================
17-03-02 12:56:29.046 -08 000000033 INF: Y Motor: Recv v 402653184\r
17-03-02 12:56:29.046 -08 000000033 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:56:29.046 -08 000000033 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:29.046 -08 000000033 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:29.108 -08 000000033 INF: Y Motor: Recv v 0\r
17-03-02 12:56:29.108 -08 000000033 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:29.108 -08 000000033 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:29.108 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:29.170 -08 000000033 INF: Y Motor: Recv ok\r
17-03-02 12:56:29.170 -08 000000033 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:29.170 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:29.232 -08 000000033 INF: Y Motor: Recv ok\r
17-03-02 12:56:29.232 -08 000000033 INF: ======================================
17-03-02 12:56:29.233 -08 000000138 INF: ===================Move X,Y===================
17-03-02 12:56:29.234 -08 000000138 INF: ======================================
17-03-02 12:56:29.424 -08 000000108 INF: Camera #0 AttachBuffer (imageDataPtr = 56928964656 imgPtr = 56928964656 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:56:29.424 -08 000000108 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:56:29.425 -08 000000108 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:29.439 -08 000000108 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:29.441 -08 000000108 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:29.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:29.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left===================
17-03-02 12:56:30.479 -08 000000108 INF: Camera #2 AttachBuffer (imageDataPtr = 64223121456 imgPtr = 65129091120 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:56:30.479 -08 000000108 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:56:30.479 -08 000000108 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:30.494 -08 000000108 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:30.496 -08 000000108 INF: ===================Camera Arm TDI===================
17-03-02 12:56:30.497 -08 000000108 INF: ======================================
17-03-02 12:56:30.498 -08 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:30.499 -08 000000055 INF: ======================================
17-03-02 12:56:30.500 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:30.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:30.501 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-03-02 12:56:30.501 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-03-02 12:56:30.542 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:56:30.542 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-03-02 12:56:30.602 -08 000000132 INF: FPGA: Recv ZFREQCL
17-03-02 12:56:30.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:56:30.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:30.602 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:30.664 -08 000000108 INF: FPGA: Recv TDIYERD 6457137
17-03-02 12:56:30.664 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457137 counts (64.571 mm)
17-03-02 12:56:30.664 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:30.665 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:30.665 -08 000000054 INF: ===================TDI FPGA Arm===================
17-03-02 12:56:30.666 -08 000000033 INF: ===================Set YMotor gains for scans===================
17-03-02 12:56:30.666 -08 000000033 INF: ======================================
17-03-02 12:56:30.666 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:30.667 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:56:30.667 -08 000000054 INF: FPGA: Xmit TDIYPOS 6346212\n
17-03-02 12:56:30.726 -08 000000131 INF: FPGA: Recv TDIYPOS
17-03-02 12:56:30.726 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:30.727 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:56:30.728 -08 000000054 INF: FPGA: Xmit TDIYARM3 139264 6437137 1 1\n
17-03-02 12:56:30.792 -08 000000096 INF: FPGA: Recv TDIYARM3
17-03-02 12:56:30.792 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:30.793 -08 000000054 INF: ===================TDI FPGA Arm===================
17-03-02 12:56:30.794 -08 000000054 INF: ======================================
17-03-02 12:56:30.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:30.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:30.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:30.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:30.797 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:30.798 -08 000000033 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:56:30.798 -08 000000061 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:56:30.798 -08 000000033 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:56:30.798 -08 000000033 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:56:30.798 -08 000000033 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:56:30.798 -08 000000033 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:56:30.798 -08 000000061 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:56:30.798 -08 000000061 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:56:30.798 -08 000000061 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:56:30.799 -08 000000061 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:56:30.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:30.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:30.973 -08 000000018 INF: WaitCommand(5000) end
17-03-02 12:56:30.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:31.072 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:56:31.105 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-03-02 12:56:31.105 -08 000000018 INF: Current Position of Pump is: 11904
17-03-02 12:56:31.165 -08 000000105 INF: FPGA: Recv EX1MV
17-03-02 12:56:31.165 -08 000000105 INF: FPGA: Recv EX2MV
17-03-02 12:56:31.165 -08 000000061 INF: Excitation Filter 2: Moved -107 steps in 367.2804 ms
17-03-02 12:56:31.166 -08 000000061 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.3864 ms
17-03-02 12:56:31.166 -08 000000061 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.518 ms
17-03-02 12:56:31.166 -08 000000033 INF: Excitation Filter 1: Moved -107 steps in 367.499 ms
17-03-02 12:56:31.166 -08 000000033 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.6913 ms
17-03-02 12:56:31.166 -08 000000033 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.7606 ms
17-03-02 12:56:31.166 -08 000000061 INF: ======================================
17-03-02 12:56:31.166 -08 000000033 INF: ======================================
17-03-02 12:56:31.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:31.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:31.169 -08 000000116 INF: ===================Camera TDI===================
17-03-02 12:56:31.169 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:31.169 -08 000000029 INF: ===================FPGA Z Wait===================
17-03-02 12:56:31.169 -08 000000129 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:31.169 -08 000000129 INF: Y Motor: Moving to 14.9230 mm @6.500 mm/sec, started at 64.5714 mm
17-03-02 12:56:31.169 -08 000000129 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:31.169 -08 000000129 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:31.170 -08 000000116 INF: ===================Camera TDI, Parallel===================
17-03-02 12:56:31.170 -08 000000100 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:56:31.170 -08 000000100 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:56:31.171 -08 000000091 INF: ===================Camera TDI===================
17-03-02 12:56:31.171 -08 000000078 INF: ===================Camera TDI===================
17-03-02 12:56:31.171 -08 000000029 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:56:31.173 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:31.173 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:31.173 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:31.174 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:31.205 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:56:31.230 -08 000000129 INF: Y Motor: Recv ok\r
17-03-02 12:56:31.230 -08 000000129 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:31.230 -08 000000129 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:31.292 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-03-02 12:56:31.292 -08 000000018 INF: Current Position of Pump is: 11904
17-03-02 12:56:31.292 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-03-02 12:56:31.293 -08 000000129 INF: Y Motor: Recv ok\r
17-03-02 12:56:31.293 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:31.324 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:31.324 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:31.325 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:31.325 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:31.355 -08 000000129 INF: Y Motor: Recv v 0\r
17-03-02 12:56:31.355 -08 000000129 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:31.355 -08 000000129 INF: Y Motor: Set target position to 992304 encoder counts
17-03-02 12:56:31.355 -08 000000129 INF: Y Motor: Xmit s r0xca 992304\r
17-03-02 12:56:31.392 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11904R\r
17-03-02 12:56:31.417 -08 000000129 INF: Y Motor: Recv ok\r
17-03-02 12:56:31.417 -08 000000129 INF: Y Motor: Start the move command
17-03-02 12:56:31.417 -08 000000129 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:31.474 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:31.474 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:31.475 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:31.475 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:31.480 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:31.481 -08 000000129 INF: Y Motor: Recv ok\r
17-03-02 12:56:31.481 -08 000000129 INF: Y Motor: WaitUntilStopped 67638
17-03-02 12:56:31.481 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:31.539 -08 000000104 INF: FPGA: Recv ZWAIT 
17-03-02 12:56:31.539 -08 000000029 INF: ======================================
17-03-02 12:56:31.580 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:31.605 -08 000000129 INF: Y Motor: Unshifted Position: 5895284
17-03-02 12:56:31.624 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:56:31.624 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:56:31.624 -08 000000091 INF: ===================Camera #2 Frame #5===================
17-03-02 12:56:31.625 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:56:31.625 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:56:31.625 -08 000000078 INF: ===================Camera #0 Frame #5===================
17-03-02 12:56:31.655 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:31.664 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:31.781 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:31.789 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:56:31.789 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:56:31.789 -08 000000091 INF: ===================Camera #2 Frame #11===================
17-03-02 12:56:31.791 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:56:31.791 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:56:31.791 -08 000000078 INF: ===================Camera #0 Frame #11===================
17-03-02 12:56:31.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:31.917 -08 000000129 INF: Y Motor: Unshifted Position: 5690974
17-03-02 12:56:31.958 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:56:31.958 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:56:31.958 -08 000000091 INF: ===================Camera #2 Frame #17===================
17-03-02 12:56:31.962 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:56:31.962 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:56:31.962 -08 000000078 INF: ===================Camera #0 Frame #17===================
17-03-02 12:56:31.967 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:31.978 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:32.091 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:32.127 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:56:32.127 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:56:32.127 -08 000000091 INF: ===================Camera #2 Frame #23===================
17-03-02 12:56:32.132 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:56:32.132 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:56:32.132 -08 000000078 INF: ===================Camera #0 Frame #23===================
17-03-02 12:56:32.227 -08 000000129 INF: Y Motor: Unshifted Position: 5489261
17-03-02 12:56:32.228 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:32.277 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:32.288 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:32.296 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:56:32.296 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:56:32.296 -08 000000091 INF: ===================Camera #2 Frame #29===================
17-03-02 12:56:32.302 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-03-02 12:56:32.302 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-03-02 12:56:32.302 -08 000000078 INF: ===================Camera #0 Frame #30===================
17-03-02 12:56:32.405 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:32.465 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:56:32.465 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:56:32.465 -08 000000091 INF: ===================Camera #2 Frame #36===================
17-03-02 12:56:32.473 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:56:32.473 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:56:32.473 -08 000000078 INF: ===================Camera #0 Frame #36===================
17-03-02 12:56:32.538 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:32.542 -08 000000129 INF: Y Motor: Unshifted Position: 5285154
17-03-02 12:56:32.592 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:32.602 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:32.638 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:56:32.638 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:56:32.638 -08 000000091 INF: ===================Camera #2 Frame #42===================
17-03-02 12:56:32.641 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:56:32.641 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:56:32.641 -08 000000078 INF: ===================Camera #0 Frame #42===================
17-03-02 12:56:32.715 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:32.807 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:56:32.807 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:56:32.807 -08 000000091 INF: ===================Camera #2 Frame #48===================
17-03-02 12:56:32.809 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:56:32.809 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:56:32.809 -08 000000078 INF: ===================Camera #0 Frame #48===================
17-03-02 12:56:32.851 -08 000000129 INF: Y Motor: Unshifted Position: 5083649
17-03-02 12:56:32.852 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:32.901 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:32.912 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:32.976 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:56:32.976 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:56:32.976 -08 000000091 INF: ===================Camera #2 Frame #54===================
17-03-02 12:56:32.977 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:56:32.977 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:56:32.977 -08 000000078 INF: ===================Camera #0 Frame #54===================
17-03-02 12:56:33.029 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:33.145 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:56:33.145 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:56:33.145 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:56:33.145 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:56:33.145 -08 000000078 INF: ===================Camera #0 Frame #61===================
17-03-02 12:56:33.145 -08 000000091 INF: ===================Camera #2 Frame #61===================
17-03-02 12:56:33.162 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:33.167 -08 000000129 INF: Y Motor: Unshifted Position: 4879334
17-03-02 12:56:33.217 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:33.226 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:33.226 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-03-02 12:56:33.226 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-02 12:56:33.316 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-03-02 12:56:33.316 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-03-02 12:56:33.316 -08 000000078 INF: ===================Camera #0 Frame #67===================
17-03-02 12:56:33.317 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-03-02 12:56:33.317 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-03-02 12:56:33.317 -08 000000091 INF: ===================Camera #2 Frame #67===================
17-03-02 12:56:33.341 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:33.475 -08 000000129 INF: Y Motor: Unshifted Position: 4677832
17-03-02 12:56:33.484 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:56:33.484 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:56:33.484 -08 000000078 INF: ===================Camera #0 Frame #73===================
17-03-02 12:56:33.486 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:56:33.486 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:56:33.486 -08 000000091 INF: ===================Camera #2 Frame #73===================
17-03-02 12:56:33.525 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:33.652 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-03-02 12:56:33.652 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-03-02 12:56:33.652 -08 000000078 INF: ===================Camera #0 Frame #79===================
17-03-02 12:56:33.653 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:33.655 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-03-02 12:56:33.655 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-03-02 12:56:33.655 -08 000000091 INF: ===================Camera #2 Frame #79===================
17-03-02 12:56:33.789 -08 000000129 INF: Y Motor: Unshifted Position: 4473506
17-03-02 12:56:33.820 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-03-02 12:56:33.820 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-03-02 12:56:33.820 -08 000000078 INF: ===================Camera #0 Frame #85===================
17-03-02 12:56:33.824 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-03-02 12:56:33.824 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-03-02 12:56:33.824 -08 000000091 INF: ===================Camera #2 Frame #86===================
17-03-02 12:56:33.839 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:33.963 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:33.988 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:56:33.988 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:56:33.988 -08 000000078 INF: ===================Camera #0 Frame #92===================
17-03-02 12:56:33.996 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:56:33.996 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:56:33.996 -08 000000091 INF: ===================Camera #2 Frame #92===================
17-03-02 12:56:34.099 -08 000000129 INF: Y Motor: Unshifted Position: 4271791
17-03-02 12:56:34.149 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:34.160 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:56:34.160 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:56:34.160 -08 000000078 INF: ===================Camera #0 Frame #98===================
17-03-02 12:56:34.165 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:56:34.165 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:56:34.165 -08 000000091 INF: ===================Camera #2 Frame #98===================
17-03-02 12:56:34.277 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:34.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-03-02 12:56:34.328 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-03-02 12:56:34.328 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-03-02 12:56:34.328 -08 000000078 INF: ===================Camera #0 Frame #104===================
17-03-02 12:56:34.334 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-03-02 12:56:34.334 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-03-02 12:56:34.334 -08 000000091 INF: ===================Camera #2 Frame #104===================
17-03-02 12:56:34.412 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:34.413 -08 000000129 INF: Y Motor: Unshifted Position: 4069636
17-03-02 12:56:34.463 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:34.496 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-03-02 12:56:34.496 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-03-02 12:56:34.496 -08 000000078 INF: ===================Camera #0 Frame #110===================
17-03-02 12:56:34.503 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-03-02 12:56:34.503 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-03-02 12:56:34.503 -08 000000091 INF: ===================Camera #2 Frame #111===================
17-03-02 12:56:34.512 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:34.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:34.588 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:34.664 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:56:34.664 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:56:34.664 -08 000000078 INF: ===================Camera #0 Frame #117===================
17-03-02 12:56:34.676 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:56:34.676 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:56:34.676 -08 000000091 INF: ===================Camera #2 Frame #117===================
17-03-02 12:56:34.723 -08 000000129 INF: Y Motor: Unshifted Position: 3864893
17-03-02 12:56:34.773 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:34.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:34.835 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-03-02 12:56:34.835 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-03-02 12:56:34.835 -08 000000078 INF: ===================Camera #0 Frame #123===================
17-03-02 12:56:34.846 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-03-02 12:56:34.846 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-03-02 12:56:34.846 -08 000000091 INF: ===================Camera #2 Frame #123===================
17-03-02 12:56:34.850 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:34.850 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:34.850 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-03-02 12:56:34.901 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:35.007 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-03-02 12:56:35.007 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-03-02 12:56:35.007 -08 000000078 INF: ===================Camera #0 Frame #129===================
17-03-02 12:56:35.015 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-03-02 12:56:35.015 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-03-02 12:56:35.015 -08 000000091 INF: ===================Camera #2 Frame #129===================
17-03-02 12:56:35.037 -08 000000129 INF: Y Motor: Unshifted Position: 3663822
17-03-02 12:56:35.087 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:35.176 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-03-02 12:56:35.176 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-03-02 12:56:35.176 -08 000000078 INF: ===================Camera #0 Frame #135===================
17-03-02 12:56:35.184 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-03-02 12:56:35.184 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-03-02 12:56:35.184 -08 000000091 INF: ===================Camera #2 Frame #136===================
17-03-02 12:56:35.213 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:35.346 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-03-02 12:56:35.346 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-03-02 12:56:35.346 -08 000000078 INF: ===================Camera #0 Frame #142===================
17-03-02 12:56:35.349 -08 000000129 INF: Y Motor: Unshifted Position: 3461024
17-03-02 12:56:35.357 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-03-02 12:56:35.357 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-03-02 12:56:35.357 -08 000000091 INF: ===================Camera #2 Frame #142===================
17-03-02 12:56:35.399 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:35.470 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:35.470 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:35.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:35.471 -08 000000018 INF: WaitCommand(10000) start
17-03-02 12:56:35.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-03-02 12:56:35.519 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-03-02 12:56:35.519 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-03-02 12:56:35.519 -08 000000078 INF: ===================Camera #0 Frame #148===================
17-03-02 12:56:35.523 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:35.526 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-03-02 12:56:35.526 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-03-02 12:56:35.526 -08 000000091 INF: ===================Camera #2 Frame #148===================
17-03-02 12:56:35.660 -08 000000129 INF: Y Motor: Unshifted Position: 3257360
17-03-02 12:56:35.689 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-03-02 12:56:35.689 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-03-02 12:56:35.689 -08 000000078 INF: ===================Camera #0 Frame #154===================
17-03-02 12:56:35.695 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-03-02 12:56:35.695 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-03-02 12:56:35.695 -08 000000091 INF: ===================Camera #2 Frame #154===================
17-03-02 12:56:35.710 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:35.837 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:35.859 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-03-02 12:56:35.859 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-03-02 12:56:35.859 -08 000000078 INF: ===================Camera #0 Frame #161===================
17-03-02 12:56:35.864 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-03-02 12:56:35.864 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-03-02 12:56:35.864 -08 000000091 INF: ===================Camera #2 Frame #161===================
17-03-02 12:56:35.971 -08 000000129 INF: Y Motor: Unshifted Position: 3054345
17-03-02 12:56:36.021 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:36.032 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-03-02 12:56:36.032 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-03-02 12:56:36.032 -08 000000078 INF: ===================Camera #0 Frame #167===================
17-03-02 12:56:36.036 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-03-02 12:56:36.036 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-03-02 12:56:36.036 -08 000000091 INF: ===================Camera #2 Frame #167===================
17-03-02 12:56:36.149 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:36.202 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-03-02 12:56:36.202 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-03-02 12:56:36.202 -08 000000078 INF: ===================Camera #0 Frame #173===================
17-03-02 12:56:36.205 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-03-02 12:56:36.205 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-03-02 12:56:36.205 -08 000000091 INF: ===================Camera #2 Frame #173===================
17-03-02 12:56:36.283 -08 000000129 INF: Y Motor: Unshifted Position: 2851547
17-03-02 12:56:36.333 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:36.372 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-03-02 12:56:36.372 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-03-02 12:56:36.372 -08 000000078 INF: ===================Camera #0 Frame #179===================
17-03-02 12:56:36.374 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-03-02 12:56:36.374 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-03-02 12:56:36.374 -08 000000091 INF: ===================Camera #2 Frame #179===================
17-03-02 12:56:36.461 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:36.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:36.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left===================
17-03-02 12:56:36.541 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-03-02 12:56:36.541 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-03-02 12:56:36.541 -08 000000078 INF: ===================Camera #0 Frame #186===================
17-03-02 12:56:36.543 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-03-02 12:56:36.543 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-03-02 12:56:36.543 -08 000000091 INF: ===================Camera #2 Frame #186===================
17-03-02 12:56:36.599 -08 000000129 INF: Y Motor: Unshifted Position: 2649187
17-03-02 12:56:36.649 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:36.714 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-03-02 12:56:36.714 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-03-02 12:56:36.714 -08 000000078 INF: ===================Camera #0 Frame #192===================
17-03-02 12:56:36.715 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-03-02 12:56:36.715 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-03-02 12:56:36.715 -08 000000091 INF: ===================Camera #2 Frame #192===================
17-03-02 12:56:36.771 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:36.884 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-03-02 12:56:36.884 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-03-02 12:56:36.884 -08 000000091 INF: ===================Camera #2 Frame #198===================
17-03-02 12:56:36.885 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-03-02 12:56:36.885 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-03-02 12:56:36.885 -08 000000078 INF: ===================Camera #0 Frame #198===================
17-03-02 12:56:36.907 -08 000000129 INF: Y Motor: Unshifted Position: 2445733
17-03-02 12:56:36.957 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:37.055 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-03-02 12:56:37.055 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-03-02 12:56:37.055 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-03-02 12:56:37.055 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-03-02 12:56:37.055 -08 000000078 INF: ===================Camera #0 Frame #205===================
17-03-02 12:56:37.055 -08 000000091 INF: ===================Camera #2 Frame #205===================
17-03-02 12:56:37.085 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:37.221 -08 000000129 INF: Y Motor: Unshifted Position: 2242068
17-03-02 12:56:37.228 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-03-02 12:56:37.228 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-03-02 12:56:37.228 -08 000000078 INF: ===================Camera #0 Frame #211===================
17-03-02 12:56:37.229 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-03-02 12:56:37.229 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-03-02 12:56:37.229 -08 000000091 INF: ===================Camera #2 Frame #211===================
17-03-02 12:56:37.271 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:37.395 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:37.398 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-03-02 12:56:37.398 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-03-02 12:56:37.398 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-03-02 12:56:37.398 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-03-02 12:56:37.398 -08 000000078 INF: ===================Camera #0 Frame #217===================
17-03-02 12:56:37.398 -08 000000091 INF: ===================Camera #2 Frame #217===================
17-03-02 12:56:37.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:37.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left===================
17-03-02 12:56:37.531 -08 000000129 INF: Y Motor: Unshifted Position: 2039921
17-03-02 12:56:37.568 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-03-02 12:56:37.568 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-03-02 12:56:37.568 -08 000000078 INF: ===================Camera #0 Frame #223===================
17-03-02 12:56:37.569 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-03-02 12:56:37.569 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-03-02 12:56:37.569 -08 000000091 INF: ===================Camera #2 Frame #223===================
17-03-02 12:56:37.581 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:37.709 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:37.738 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-03-02 12:56:37.738 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-03-02 12:56:37.738 -08 000000078 INF: ===================Camera #0 Frame #230===================
17-03-02 12:56:37.740 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-03-02 12:56:37.740 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-03-02 12:56:37.740 -08 000000091 INF: ===================Camera #2 Frame #230===================
17-03-02 12:56:37.845 -08 000000129 INF: Y Motor: Unshifted Position: 1837552
17-03-02 12:56:37.895 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:37.912 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-03-02 12:56:37.912 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-03-02 12:56:37.912 -08 000000078 INF: ===================Camera #0 Frame #236===================
17-03-02 12:56:37.914 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-03-02 12:56:37.914 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-03-02 12:56:37.914 -08 000000091 INF: ===================Camera #2 Frame #236===================
17-03-02 12:56:38.019 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:38.082 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-03-02 12:56:38.082 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-03-02 12:56:38.082 -08 000000078 INF: ===================Camera #0 Frame #242===================
17-03-02 12:56:38.085 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-03-02 12:56:38.085 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-03-02 12:56:38.085 -08 000000091 INF: ===================Camera #2 Frame #242===================
17-03-02 12:56:38.155 -08 000000129 INF: Y Motor: Unshifted Position: 1634107
17-03-02 12:56:38.205 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:38.252 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-03-02 12:56:38.252 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-03-02 12:56:38.252 -08 000000078 INF: ===================Camera #0 Frame #249===================
17-03-02 12:56:38.256 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-03-02 12:56:38.256 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-03-02 12:56:38.256 -08 000000091 INF: ===================Camera #2 Frame #249===================
17-03-02 12:56:38.329 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:38.425 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-03-02 12:56:38.425 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-03-02 12:56:38.425 -08 000000078 INF: ===================Camera #0 Frame #255===================
17-03-02 12:56:38.430 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-03-02 12:56:38.430 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-03-02 12:56:38.430 -08 000000091 INF: ===================Camera #2 Frame #255===================
17-03-02 12:56:38.468 -08 000000129 INF: Y Motor: Unshifted Position: 1429773
17-03-02 12:56:38.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:38.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left===================
17-03-02 12:56:38.518 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:38.595 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-03-02 12:56:38.595 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-03-02 12:56:38.595 -08 000000078 INF: ===================Camera #0 Frame #261===================
17-03-02 12:56:38.599 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-03-02 12:56:38.599 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-03-02 12:56:38.599 -08 000000091 INF: ===================Camera #2 Frame #261===================
17-03-02 12:56:38.642 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:38.764 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-03-02 12:56:38.764 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-03-02 12:56:38.764 -08 000000078 INF: ===================Camera #0 Frame #267===================
17-03-02 12:56:38.768 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-03-02 12:56:38.768 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-03-02 12:56:38.768 -08 000000091 INF: ===================Camera #2 Frame #268===================
17-03-02 12:56:38.781 -08 000000129 INF: Y Motor: Unshifted Position: 1228920
17-03-02 12:56:38.831 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:38.903 -08 000000044 INF: FPGA: Recv TDIYWAIT
17-03-02 12:56:38.903 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:38.905 -08 000000100 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:56:38.906 -08 000000098 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:56:38.906 -08 000000073 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:56:38.906 -08 000000098 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:56:38.906 -08 000000098 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:56:38.906 -08 000000098 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:56:38.906 -08 000000098 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:56:38.906 -08 000000073 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:56:38.906 -08 000000073 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:56:38.906 -08 000000073 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:56:38.907 -08 000000073 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:56:38.934 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:56:38.934 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:56:38.934 -08 000000078 INF: ===================Camera #0 Frame #272===================
17-03-02 12:56:38.940 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:56:38.940 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:56:38.940 -08 000000091 INF: ===================Camera #2 Frame #272===================
17-03-02 12:56:38.950 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:56:38.951 -08 000000078 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:38.952 -08 000000091 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:56:38.953 -08 000000091 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:38.955 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:39.091 -08 000000129 INF: Y Motor: Unshifted Position: 1025475
17-03-02 12:56:39.130 -08 000000078 INF: Camera #0 ReleaseBuffer
17-03-02 12:56:39.131 -08 000000078 INF: ===================Camera TDI===================
17-03-02 12:56:39.141 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:39.255 -08 000000078 INF: ======================================
17-03-02 12:56:39.308 -08 000000135 INF: FPGA: Recv EX1MV
17-03-02 12:56:39.308 -08 000000135 INF: FPGA: Recv EX2MV
17-03-02 12:56:39.308 -08 000000073 INF: Excitation Filter 2: Moved 107 steps in 401.7816 ms
17-03-02 12:56:39.308 -08 000000098 INF: Excitation Filter 1: Moved 107 steps in 401.9849 ms
17-03-02 12:56:39.308 -08 000000098 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 402.0918 ms
17-03-02 12:56:39.308 -08 000000098 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 402.1611 ms
17-03-02 12:56:39.308 -08 000000073 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 401.9165 ms
17-03-02 12:56:39.308 -08 000000073 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 402.1029 ms
17-03-02 12:56:39.308 -08 000000073 INF: ======================================
17-03-02 12:56:39.308 -08 000000098 INF: ======================================
17-03-02 12:56:39.309 -08 000000129 INF: Y Motor: Unshifted Position: 992305
17-03-02 12:56:39.309 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:39.309 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:39.310 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:39.311 -08 000000100 INF: ======================================
17-03-02 12:56:39.334 -08 000000091 INF: Camera #2 ReleaseBuffer
17-03-02 12:56:39.334 -08 000000091 INF: ===================Camera TDI===================
17-03-02 12:56:39.368 -08 000000091 INF: ======================================
17-03-02 12:56:39.369 -08 000000116 INF: ===================Camera TDI===================
17-03-02 12:56:39.371 -08 000000129 INF: Y Motor: Recv v 0\r
17-03-02 12:56:39.371 -08 000000129 INF: Y Motor: Moved to 14.9231 after 7890 ms
17-03-02 12:56:39.371 -08 000000116 INF: ======================================
17-03-02 12:56:39.371 -08 000000129 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:39.436 -08 000000129 INF: Y Motor: Recv v 4097\r
17-03-02 12:56:39.436 -08 000000129 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:39.436 -08 000000129 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:39.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:39.471 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-03-02 12:56:39.498 -08 000000129 INF: Y Motor: Recv v 0\r
17-03-02 12:56:39.498 -08 000000129 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:39.498 -08 000000129 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:39.560 -08 000000129 INF: Y Motor: Recv v 134217728\r
17-03-02 12:56:39.560 -08 000000129 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:56:39.560 -08 000000129 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:39.560 -08 000000129 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:39.622 -08 000000129 INF: Y Motor: Recv v 0\r
17-03-02 12:56:39.622 -08 000000129 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:39.622 -08 000000129 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:39.622 -08 000000129 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:39.684 -08 000000129 INF: Y Motor: Recv ok\r
17-03-02 12:56:39.684 -08 000000129 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:39.684 -08 000000129 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:39.746 -08 000000129 INF: Y Motor: Recv ok\r
17-03-02 12:56:39.746 -08 000000129 INF: ======================================
17-03-02 12:56:39.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:39.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:39.749 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:39.749 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:56:39.806 -08 000000115 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:56:39.806 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:39.871 -08 000000028 INF: FPGA: Recv TDIYERD 1492305
17-03-02 12:56:39.871 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:56:39.933 -08 000000060 INF: FPGA: Recv ZADCR 34743
17-03-02 12:56:39.933 -08 000000042 INF: At scan end Y pos = 14.923 and Z pos = -0.133. Y moved -48.539 mm
17-03-02 12:56:39.933 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:56:39.995 -08 000000135 INF: FPGA: Recv TDIPULSES 139265
17-03-02 12:56:39.995 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-03-02 12:56:39.995 -08 000000042 INF: TDIScan finished after 11986.8691 ms
17-03-02 12:56:39.995 -08 000000042 INF: Image[0]: Y should trigger at 63.462 mm, 2nd row was at 64.371 mm (error = 0.909 mm)
17-03-02 12:56:39.995 -08 000000042 INF: Image[2]: Y should trigger at 63.462 mm, 2nd row was at 64.371 mm (error = 0.909 mm)
17-03-02 12:56:39.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.031 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.726 um
17-03-02 12:56:40.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.032 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:56:40.057 -08 000000097 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:56:40.058 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.058 -08 000000060 INF: ===================Dither Clean Up Command===================
17-03-02 12:56:40.058 -08 000000062 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:56:40.058 -08 000000068 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:56:40.059 -08 000000112 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:56:40.059 -08 000000068 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:56:40.059 -08 000000068 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:56:40.059 -08 000000112 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:56:40.059 -08 000000112 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:56:40.059 -08 000000062 INF: ======================================
17-03-02 12:56:40.059 -08 000000071 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:56:40.059 -08 000000136 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:40.060 -08 000000071 INF: FPGA: Xmit ZSEL 0\n
17-03-02 12:56:40.062 -08 000000136 INF: ===================LFT:Extracting coords===================
17-03-02 12:56:40.088 -08 000000136 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:40.088 -08 000000136 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-03-02 12:56:40.089 -08 000000131 INF: ===================LookupFocusTracking===================
17-03-02 12:56:40.089 -08 000000083 INF: ===================LookupFocusTracking===================
17-03-02 12:56:40.089 -08 000000096 INF: ===================LookupFocusTracking===================
17-03-02 12:56:40.090 -08 000000095 INF: ===================LookupFocusTracking===================
17-03-02 12:56:40.090 -08 000000131 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:40.090 -08 000000083 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:40.090 -08 000000095 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:40.090 -08 000000096 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:40.119 -08 000000111 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:40.119 -08 000000111 INF: FPGA: Recv ZSEL 
17-03-02 12:56:40.119 -08 000000071 INF: FPGA: Xmit ZDACW 40080\n
17-03-02 12:56:40.119 -08 000000112 INF: ======================================
17-03-02 12:56:40.121 -08 000000068 INF: Y Motor: Recv ok\r
17-03-02 12:56:40.121 -08 000000068 INF: ======================================
17-03-02 12:56:40.164 -08 000000131 INF: FC:B, C:161,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:40.164 -08 000000083 INF: FC:B, C:161,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:40.164 -08 000000095 INF: FC:B, C:161,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:40.164 -08 000000096 INF: FC:B, C:161,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:40.181 -08 000000045 INF: FPGA: Recv ZDACW 
17-03-02 12:56:40.182 -08 000000071 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-03-02 12:56:40.182 -08 000000071 INF: FPGA: Xmit TDIBB 0\n
17-03-02 12:56:40.243 -08 000000036 INF: FPGA: Recv TDIBB
17-03-02 12:56:40.243 -08 000000071 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:56:40.244 -08 000000071 INF: ======================================
17-03-02 12:56:40.315 -08 000000095 INF: LFT found best fwhm score 2.202446 in 151 ms
17-03-02 12:56:40.315 -08 000000095 INF: LFT found good score at index 5401 with fwhm value 2.202446. Next cycle, cycle 162 starting Z position for top surface is at -0.156 mm FC:B, C:161,L:2,T
17-03-02 12:56:40.315 -08 000000083 INF: LFT found best fwhm score 2.00036 in 151 ms
17-03-02 12:56:40.315 -08 000000131 INF: LFT found best fwhm score 2.006296 in 151 ms
17-03-02 12:56:40.315 -08 000000083 INF: LFT found good score at index 557 with fwhm value 2.00036. Next cycle, cycle 162 starting Z position for top surface is at -0.157 mm FC:B, C:161,L:2,T
17-03-02 12:56:40.316 -08 000000095 INF: ===================LookupFocusTracking===================
17-03-02 12:56:40.316 -08 000000096 INF: LFT found best fwhm score 2.000224 in 152 ms
17-03-02 12:56:40.316 -08 000000083 INF: ===================LookupFocusTracking===================
17-03-02 12:56:40.316 -08 000000096 INF: LFT found good score at index 4209 with fwhm value 2.000224. Next cycle, cycle 162 starting Z position for top surface is at -0.156 mm FC:B, C:161,L:2,T
17-03-02 12:56:40.316 -08 000000095 INF: ======================================
17-03-02 12:56:40.316 -08 000000096 INF: ===================LookupFocusTracking===================
17-03-02 12:56:40.316 -08 000000083 INF: ======================================
17-03-02 12:56:40.316 -08 000000096 INF: ======================================
17-03-02 12:56:40.316 -08 000000131 INF: LFT found good score at index 5141 with fwhm value 2.006296. Next cycle, cycle 162 starting Z position for top surface is at -0.156 mm FC:B, C:161,L:2,T
17-03-02 12:56:40.317 -08 000000131 INF: ===================LookupFocusTracking===================
17-03-02 12:56:40.317 -08 000000131 INF: ======================================
17-03-02 12:56:40.318 -08 000000136 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:40.319 -08 000000136 INF: LFT weighted average best Z for top surface is at -0.156mm FC:B, C:161,L:2,T
17-03-02 12:56:40.319 -08 000000136 INF: ======================================
17-03-02 12:56:40.321 -08 000000060 INF: ======================================
17-03-02 12:56:40.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:56:40.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:56:40.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:56:40.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:56:40.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.324 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-03-02 12:56:40.324 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-03-02 12:56:40.325 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left, Waiting for image analysis===================
17-03-02 12:56:40.325 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-03-02 12:56:40.325 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Waiting for image analysis===================
17-03-02 12:56:40.325 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-03-02 12:56:40.348 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-03-02 12:56:40.348 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:40.349 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-03-02 12:56:40.349 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:40.349 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-03-02 12:56:40.349 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-03-02 12:56:40.349 -08 000000042 INF: Transformed XStagePosition from 72.50464 mm to 72.4825586713851 mm.
17-03-02 12:56:40.394 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5710293551683 mm.
17-03-02 12:56:40.394 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3710293551683 mm.
17-03-02 12:56:40.394 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4617793551683 mm.
17-03-02 12:56:40.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-03-02 12:56:40.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:40.397 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -152.9 um, section = B_1
17-03-02 12:56:40.433 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1106 Request: {"Cycle":161,"Lane":2,"Tile":1106,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF200","HCSMMF208","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.568 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:40.568 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left===================
17-03-02 12:56:40.569 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:40.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:40.574 -08 000000108 INF: ===================MoveEmissionFilters===================
17-03-02 12:56:40.575 -08 000000122 INF: ===================Move X,Y===================
17-03-02 12:56:40.576 -08 000000122 INF: ===================Move X,Y, Parallel===================
17-03-02 12:56:40.588 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:40.588 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:40.589 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-03-02 12:56:40.589 -08 000000105 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:56:40.589 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:40.589 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:40.591 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-03-02 12:56:40.591 -08 000000119 INF: ===================Move X Motor without settling===================
17-03-02 12:56:40.592 -08 000000119 INF: X Motor: Xmit PR VM\n
17-03-02 12:56:40.594 -08 000000116 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:40.596 -08 000000072 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:40.596 -08 000000072 INF: Y Motor: Moving to 64.5710 mm @25.000 mm/sec, started at 14.9231 mm
17-03-02 12:56:40.597 -08 000000116 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:40.597 -08 000000072 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:40.597 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:40.600 -08 000000060 INF: ===================Camera Arm TDI===================
17-03-02 12:56:40.601 -08 000000050 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:56:40.601 -08 000000068 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:40.601 -08 000000110 INF: ===================TDI Scan Setup===================
17-03-02 12:56:40.601 -08 000000060 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:40.601 -08 000000050 INF: ======================================
17-03-02 12:56:40.601 -08 000000028 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:56:40.602 -08 000000086 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:56:40.602 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:40.602 -08 000000028 INF: ======================================
17-03-02 12:56:40.602 -08 000000086 INF: ======================================
17-03-02 12:56:40.603 -08 000000060 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:40.603 -08 000000068 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:40.604 -08 000000116 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:40.604 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:40.604 -08 000000028 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:56:40.605 -08 000000028 INF: ======================================
17-03-02 12:56:40.605 -08 000000116 INF: ======================================
17-03-02 12:56:40.606 -08 000000083 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:56:40.606 -08 000000083 INF: ======================================
17-03-02 12:56:40.606 -08 000000029 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:56:40.607 -08 000000029 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:56:40.607 -08 000000131 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:56:40.607 -08 000000075 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:56:40.608 -08 000000029 INF: ======================================
17-03-02 12:56:40.608 -08 000000075 INF: ======================================
17-03-02 12:56:40.608 -08 000000068 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:40.610 -08 000000068 INF: ======================================
17-03-02 12:56:40.611 -08 000000131 INF: ======================================
17-03-02 12:56:40.615 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:40.615 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:40.618 -08 000000044 INF: ======================================
17-03-02 12:56:40.619 -08 000000091 INF: ======================================
17-03-02 12:56:40.621 -08 000000108 INF: ======================================
17-03-02 12:56:40.639 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:56:40.639 -08 000000072 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:40.639 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:40.641 -08 000000119 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:56:40.641 -08 000000119 INF: X Motor: Xmit PR VI\n
17-03-02 12:56:40.647 -08 000000110 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:40.648 -08 000000110 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:56:40.648 -08 000000110 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:40.649 -08 000000110 INF: FPGA: Xmit ZSEL 3\n
17-03-02 12:56:40.657 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1108 Request: {"Cycle":161,"Lane":2,"Tile":1108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF203","HCSMMF250","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.667 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1103 Request: {"Cycle":161,"Lane":2,"Tile":1103,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF214","HCSMMF254","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.670 -08 000000133 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1109 Request: {"Cycle":161,"Lane":2,"Tile":1109,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF225","HCSMMF192","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.671 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1120 Request: {"Cycle":161,"Lane":2,"Tile":1120,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF193","HCSMMF176","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.672 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1111 Request: {"Cycle":161,"Lane":2,"Tile":1111,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF244","HCSMMF260","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.672 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1115 Request: {"Cycle":161,"Lane":2,"Tile":1115,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF221","HCSMMF206","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.673 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1110 Request: {"Cycle":161,"Lane":2,"Tile":1110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF229","HCSMMF205","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.674 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1112 Request: {"Cycle":161,"Lane":2,"Tile":1112,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF273","HCSMMF223","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.675 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1107 Request: {"Cycle":161,"Lane":2,"Tile":1107,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF180","HCSMMF181","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.675 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1116 Request: {"Cycle":161,"Lane":2,"Tile":1116,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF191","HCSMMF255","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.676 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1126 Request: {"Cycle":161,"Lane":2,"Tile":1126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF222","HCSMMF274","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.677 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1102 Request: {"Cycle":161,"Lane":2,"Tile":1102,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF224","HCSMMF213","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.678 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1113 Request: {"Cycle":161,"Lane":2,"Tile":1113,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF251","HCSMMF209","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.679 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1105 Request: {"Cycle":161,"Lane":2,"Tile":1105,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF282","HCSMMF277","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.680 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1117 Request: {"Cycle":161,"Lane":2,"Tile":1117,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF238","HCSMMF212","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.680 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1125 Request: {"Cycle":161,"Lane":2,"Tile":1125,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF219","HCSMMF247","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.681 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1119 Request: {"Cycle":161,"Lane":2,"Tile":1119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF232","HCSMMF258","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.682 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1121 Request: {"Cycle":161,"Lane":2,"Tile":1121,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF198","HCSMMF201","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.683 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1123 Request: {"Cycle":161,"Lane":2,"Tile":1123,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF211","HCSMMF240","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.684 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1101 Request: {"Cycle":161,"Lane":2,"Tile":1101,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF207","HCSMMF226","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.685 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1122 Request: {"Cycle":161,"Lane":2,"Tile":1122,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF217","HCSMMF190","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.686 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1104 Request: {"Cycle":161,"Lane":2,"Tile":1104,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF233","HCSMMF252","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.687 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1128 Request: {"Cycle":161,"Lane":2,"Tile":1128,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF278","HCSMMF269","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.689 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1127 Request: {"Cycle":161,"Lane":2,"Tile":1127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF261","HCSMMF266","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.690 -08 000000135 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1124 Request: {"Cycle":161,"Lane":2,"Tile":1124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF178","HCSMMF268","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.692 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1118 Request: {"Cycle":161,"Lane":2,"Tile":1118,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF230","HCSMMF184","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.693 -08 000000112 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1114 Request: {"Cycle":161,"Lane":2,"Tile":1114,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF234","HCSMMF272","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:40.695 -08 000000063 INF: FPGA: Recv ZSEL 
17-03-02 12:56:40.696 -08 000000110 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:40.696 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:40.696 -08 000000110 INF: FPGA: Xmit TDIBB 1\n
17-03-02 12:56:40.697 -08 000000119 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:56:40.697 -08 000000119 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:56:40.697 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:56:40.697 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:40.697 -08 000000119 INF: X Motor: Moving to 72.4826 mm @15.000 mm/sec, started at 71.3779 mm
17-03-02 12:56:40.697 -08 000000119 INF: X Motor: Xmit MA 5522\n
17-03-02 12:56:40.702 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-03-02 12:56:40.760 -08 000000054 INF: FPGA: Recv TDIBB
17-03-02 12:56:40.761 -08 000000110 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:56:40.762 -08 000000119 INF: X Motor: Recv MA 5522\r\n>
17-03-02 12:56:40.762 -08 000000072 INF: Y Motor: Recv v 0\r
17-03-02 12:56:40.762 -08 000000072 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:40.762 -08 000000119 INF: X Motor: WaitUntilStopped 60074
17-03-02 12:56:40.762 -08 000000110 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:56:40.762 -08 000000072 INF: Y Motor: Set target position to 5957103 encoder counts
17-03-02 12:56:40.762 -08 000000072 INF: Y Motor: Xmit s r0xca 5957103\r
17-03-02 12:56:40.762 -08 000000110 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:40.764 -08 000000110 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-03-02 12:56:40.764 -08 000000110 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-03-02 12:56:40.764 -08 000000110 INF: FPGA: Xmit ZSTEP 1792263\n
17-03-02 12:56:40.792 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:40.792 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-03-02 12:56:40.824 -08 000000029 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:40.825 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:56:40.825 -08 000000072 INF: Y Motor: Start the move command
17-03-02 12:56:40.825 -08 000000072 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:40.825 -08 000000110 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:40.827 -08 000000110 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:56:40.827 -08 000000110 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:40.829 -08 000000110 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:56:40.829 -08 000000110 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:56:40.829 -08 000000110 INF: Z Motor: Arming to move to -0.1129 mm
17-03-02 12:56:40.829 -08 000000110 INF: FPGA: Xmit ZYT 6437103 4\n
17-03-02 12:56:40.830 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:40.836 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-03-02 12:56:40.886 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:56:40.886 -08 000000072 INF: Y Motor: WaitUntilStopped 61986
17-03-02 12:56:40.886 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:40.886 -08 000000062 INF: FPGA: Recv ZYT 
17-03-02 12:56:40.887 -08 000000110 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492305 enc / 14.923 mm / ) = 6437103 enc / 64.371 mm
17-03-02 12:56:40.887 -08 000000110 INF: FPGA: Xmit ZARM 29595\n
17-03-02 12:56:40.919 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:40.925 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-03-02 12:56:40.946 -08 000000115 INF: FPGA: Recv ZARM
17-03-02 12:56:40.946 -08 000000110 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.2112 ms
17-03-02 12:56:40.946 -08 000000110 INF: Z Motor: ArmAbsStepped took 116.8768 ms
17-03-02 12:56:40.946 -08 000000110 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:40.948 -08 000000110 INF: ===================TDI Scan Setup===================
17-03-02 12:56:40.949 -08 000000110 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:56:40.950 -08 000000110 INF: ===================TDI Scan Setup===================
17-03-02 12:56:40.951 -08 000000110 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:56:40.952 -08 000000110 INF: ===================TDI Scan Setup===================
17-03-02 12:56:40.953 -08 000000110 INF: ======================================
17-03-02 12:56:41.010 -08 000000072 INF: Y Motor: Unshifted Position: 1072540
17-03-02 12:56:41.023 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:41.029 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-03-02 12:56:41.060 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:41.118 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:41.184 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:41.202 -08 000000060 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:56:41.202 -08 000000060 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:56:41.202 -08 000000060 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:41.217 -08 000000060 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:41.219 -08 000000060 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:41.325 -08 000000072 INF: Y Motor: Unshifted Position: 1778966
17-03-02 12:56:41.343 -08 000000071 INF: RunCopyService queue size at 3/2/2017 12:56:41 PM is 0
17-03-02 12:56:41.529 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:41.530 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-03-02 12:56:41.532 -08 000000119 INF: X Motor: Xmit PR ER\n
17-03-02 12:56:41.570 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:41.570 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left===================
17-03-02 12:56:41.590 -08 000000119 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:56:41.590 -08 000000119 INF: X Motor: Moved to 72.4814 after 827 ms
17-03-02 12:56:41.590 -08 000000119 INF: ======================================
17-03-02 12:56:41.640 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:41.776 -08 000000072 INF: Y Motor: Unshifted Position: 2909761
17-03-02 12:56:41.826 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:41.840 -08 000000060 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:56:41.840 -08 000000060 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:56:41.840 -08 000000060 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:41.856 -08 000000060 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:56:41.857 -08 000000060 INF: ===================Camera Arm TDI===================
17-03-02 12:56:41.858 -08 000000060 INF: ======================================
17-03-02 12:56:41.860 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:56:41.861 -08 000000105 INF: ======================================
17-03-02 12:56:41.950 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:42.089 -08 000000072 INF: Y Motor: Unshifted Position: 3684833
17-03-02 12:56:42.139 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:42.262 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:42.401 -08 000000072 INF: Y Motor: Unshifted Position: 4475632
17-03-02 12:56:42.451 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:42.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:42.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left===================
17-03-02 12:56:42.574 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:42.713 -08 000000072 INF: Y Motor: Unshifted Position: 5246477
17-03-02 12:56:42.763 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:42.887 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:43.023 -08 000000072 INF: Y Motor: Unshifted Position: 5909935
17-03-02 12:56:43.073 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:43.213 -08 000000072 INF: Y Motor: Unshifted Position: 5957106
17-03-02 12:56:43.213 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:43.213 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:43.276 -08 000000072 INF: Y Motor: Recv v 0\r
17-03-02 12:56:43.276 -08 000000072 INF: Y Motor: Moved to 64.5711 after 2389 ms
17-03-02 12:56:43.276 -08 000000072 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:43.336 -08 000000072 INF: Y Motor: Recv v 4096\r
17-03-02 12:56:43.336 -08 000000072 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:43.336 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:43.398 -08 000000072 INF: Y Motor: Recv v 0\r
17-03-02 12:56:43.398 -08 000000072 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:43.398 -08 000000072 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:43.460 -08 000000072 INF: Y Motor: Recv v 402653184\r
17-03-02 12:56:43.460 -08 000000072 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:56:43.460 -08 000000072 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:43.460 -08 000000072 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:43.522 -08 000000072 INF: Y Motor: Recv v 0\r
17-03-02 12:56:43.522 -08 000000072 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:43.522 -08 000000072 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:43.522 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:43.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:43.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left===================
17-03-02 12:56:43.584 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:56:43.584 -08 000000072 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:43.584 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:43.649 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:56:43.649 -08 000000072 INF: ======================================
17-03-02 12:56:43.650 -08 000000122 INF: ===================Move X,Y===================
17-03-02 12:56:43.652 -08 000000122 INF: ======================================
17-03-02 12:56:43.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:43.654 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:43.654 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-03-02 12:56:43.654 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-03-02 12:56:43.711 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:56:43.711 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-03-02 12:56:43.771 -08 000000078 INF: FPGA: Recv ZFREQCL
17-03-02 12:56:43.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:56:43.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:43.772 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:43.834 -08 000000029 INF: FPGA: Recv TDIYERD 6457104
17-03-02 12:56:43.834 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457104 counts (64.571 mm)
17-03-02 12:56:43.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:43.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:43.836 -08 000000104 INF: ===================TDI FPGA Arm===================
17-03-02 12:56:43.836 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-03-02 12:56:43.836 -08 000000044 INF: ======================================
17-03-02 12:56:43.837 -08 000000104 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:43.837 -08 000000104 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:56:43.838 -08 000000104 INF: FPGA: Xmit TDIYPOS 6346178\n
17-03-02 12:56:43.896 -08 000000123 INF: FPGA: Recv TDIYPOS
17-03-02 12:56:43.896 -08 000000104 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:43.898 -08 000000104 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:56:43.898 -08 000000104 INF: FPGA: Xmit TDIYARM3 139264 6437103 1 1\n
17-03-02 12:56:43.959 -08 000000100 INF: FPGA: Recv TDIYARM3
17-03-02 12:56:43.959 -08 000000104 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:56:43.961 -08 000000104 INF: ===================TDI FPGA Arm===================
17-03-02 12:56:43.962 -08 000000104 INF: ======================================
17-03-02 12:56:43.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:43.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:43.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:43.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:43.965 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:43.966 -08 000000061 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:56:43.966 -08 000000044 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:56:43.966 -08 000000061 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:56:43.966 -08 000000061 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:56:43.966 -08 000000061 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:56:43.966 -08 000000044 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:56:43.966 -08 000000061 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:56:43.966 -08 000000044 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:56:43.966 -08 000000044 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:56:43.969 -08 000000044 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:56:44.331 -08 000000033 INF: FPGA: Recv EX2MV
17-03-02 12:56:44.331 -08 000000033 INF: FPGA: Recv EX1MV
17-03-02 12:56:44.331 -08 000000044 INF: Excitation Filter 1: Moved -107 steps in 365.1689 ms
17-03-02 12:56:44.331 -08 000000061 INF: Excitation Filter 2: Moved -107 steps in 365.37 ms
17-03-02 12:56:44.331 -08 000000061 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.5294 ms
17-03-02 12:56:44.331 -08 000000061 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.5993 ms
17-03-02 12:56:44.331 -08 000000044 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.3438 ms
17-03-02 12:56:44.332 -08 000000044 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.7582 ms
17-03-02 12:56:44.332 -08 000000061 INF: ======================================
17-03-02 12:56:44.332 -08 000000044 INF: ======================================
17-03-02 12:56:44.333 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:44.334 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:44.335 -08 000000025 INF: ===================Camera TDI===================
17-03-02 12:56:44.335 -08 000000030 INF: ===================FPGA Z Wait===================
17-03-02 12:56:44.335 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:44.335 -08 000000092 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:44.336 -08 000000092 INF: Y Motor: Moving to 14.9227 mm @6.500 mm/sec, started at 64.5711 mm
17-03-02 12:56:44.336 -08 000000030 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:56:44.336 -08 000000092 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:44.336 -08 000000092 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:44.336 -08 000000025 INF: ===================Camera TDI, Parallel===================
17-03-02 12:56:44.336 -08 000000034 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:56:44.337 -08 000000034 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:56:44.337 -08 000000110 INF: ===================Camera TDI===================
17-03-02 12:56:44.337 -08 000000135 INF: ===================Camera TDI===================
17-03-02 12:56:44.338 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:44.338 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:44.339 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:44.339 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:44.395 -08 000000092 INF: Y Motor: Recv ok\r
17-03-02 12:56:44.395 -08 000000092 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:44.395 -08 000000092 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:44.461 -08 000000092 INF: Y Motor: Recv ok\r
17-03-02 12:56:44.461 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:44.488 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:44.488 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:44.489 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:44.489 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:44.522 -08 000000092 INF: Y Motor: Recv v 0\r
17-03-02 12:56:44.522 -08 000000092 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:44.522 -08 000000092 INF: Y Motor: Set target position to 992269 encoder counts
17-03-02 12:56:44.522 -08 000000092 INF: Y Motor: Xmit s r0xca 992269\r
17-03-02 12:56:44.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:44.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left===================
17-03-02 12:56:44.584 -08 000000092 INF: Y Motor: Recv ok\r
17-03-02 12:56:44.584 -08 000000092 INF: Y Motor: Start the move command
17-03-02 12:56:44.584 -08 000000092 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:44.638 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:44.638 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:44.639 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:44.639 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:44.646 -08 000000092 INF: Y Motor: Recv ok\r
17-03-02 12:56:44.646 -08 000000092 INF: Y Motor: WaitUntilStopped 67638
17-03-02 12:56:44.646 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:44.707 -08 000000056 INF: FPGA: Recv ZWAIT 
17-03-02 12:56:44.707 -08 000000030 INF: ======================================
17-03-02 12:56:44.770 -08 000000092 INF: Y Motor: Unshifted Position: 5895251
17-03-02 12:56:44.788 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:56:44.788 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:56:44.788 -08 000000135 INF: ===================Camera #2 Frame #5===================
17-03-02 12:56:44.789 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:56:44.789 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:56:44.789 -08 000000110 INF: ===================Camera #0 Frame #5===================
17-03-02 12:56:44.820 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:44.951 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:44.954 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:56:44.954 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:56:44.954 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:56:44.954 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:56:44.954 -08 000000110 INF: ===================Camera #0 Frame #11===================
17-03-02 12:56:44.954 -08 000000135 INF: ===================Camera #2 Frame #11===================
17-03-02 12:56:45.099 -08 000000092 INF: Y Motor: Unshifted Position: 5680529
17-03-02 12:56:45.123 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:56:45.123 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:56:45.123 -08 000000110 INF: ===================Camera #0 Frame #17===================
17-03-02 12:56:45.126 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:56:45.126 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:56:45.126 -08 000000135 INF: ===================Camera #2 Frame #17===================
17-03-02 12:56:45.149 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:45.273 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:45.293 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:56:45.293 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:56:45.293 -08 000000110 INF: ===================Camera #0 Frame #23===================
17-03-02 12:56:45.296 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:56:45.296 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:56:45.296 -08 000000135 INF: ===================Camera #2 Frame #23===================
17-03-02 12:56:45.409 -08 000000092 INF: Y Motor: Unshifted Position: 5479690
17-03-02 12:56:45.459 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:45.462 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:56:45.462 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:56:45.462 -08 000000110 INF: ===================Camera #0 Frame #29===================
17-03-02 12:56:45.467 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:56:45.467 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:56:45.467 -08 000000135 INF: ===================Camera #2 Frame #29===================
17-03-02 12:56:45.473 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:45.473 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:45.473 -08 000000018 INF: WaitCommand(10000) end
17-03-02 12:56:45.473 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:45.474 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Deblock===================
17-03-02 12:56:45.474 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle===================
17-03-02 12:56:45.475 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:56:45.475 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:56:45.476 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:56:45.476 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:45.535 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:45.535 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-03-02 12:56:45.535 -08 000000018 INF: Valve A1: Go to position 4
17-03-02 12:56:45.535 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:56:45.586 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:45.597 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-03-02 12:56:45.597 -08 000000018 INF: Valve A1: 38.358 seconds since last move, > 10.000 seconds required between moves
17-03-02 12:56:45.597 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 7 to 4
17-03-02 12:56:45.597 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC4\r
17-03-02 12:56:45.597 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-03-02 12:56:45.597 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:56:45.636 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:56:45.636 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:56:45.636 -08 000000110 INF: ===================Camera #0 Frame #36===================
17-03-02 12:56:45.645 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:56:45.645 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:56:45.645 -08 000000135 INF: ===================Camera #2 Frame #36===================
17-03-02 12:56:45.722 -08 000000092 INF: Y Motor: Unshifted Position: 5276017
17-03-02 12:56:45.772 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:45.807 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:56:45.807 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:56:45.807 -08 000000110 INF: ===================Camera #0 Frame #42===================
17-03-02 12:56:45.818 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:56:45.818 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:56:45.818 -08 000000135 INF: ===================Camera #2 Frame #42===================
17-03-02 12:56:45.896 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:45.976 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:56:45.976 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:56:45.976 -08 000000110 INF: ===================Camera #0 Frame #48===================
17-03-02 12:56:45.987 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-03-02 12:56:45.987 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-03-02 12:56:45.987 -08 000000135 INF: ===================Camera #2 Frame #49===================
17-03-02 12:56:46.034 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-03-02 12:56:46.034 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:56:46.034 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-03-02 12:56:46.036 -08 000000092 INF: Y Motor: Unshifted Position: 5072569
17-03-02 12:56:46.086 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:46.144 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:56:46.144 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:56:46.144 -08 000000110 INF: ===================Camera #0 Frame #54===================
17-03-02 12:56:46.160 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-03-02 12:56:46.160 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-03-02 12:56:46.161 -08 000000135 INF: ===================Camera #2 Frame #55===================
17-03-02 12:56:46.209 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:46.312 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:56:46.312 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:56:46.312 -08 000000110 INF: ===================Camera #0 Frame #61===================
17-03-02 12:56:46.330 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:56:46.330 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:56:46.330 -08 000000135 INF: ===================Camera #2 Frame #61===================
17-03-02 12:56:46.345 -08 000000092 INF: Y Motor: Unshifted Position: 4870856
17-03-02 12:56:46.395 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:46.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:56:46.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:56:46.404 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:46.471 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:46.479 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-03-02 12:56:46.484 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-03-02 12:56:46.484 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-03-02 12:56:46.484 -08 000000110 INF: ===================Camera #0 Frame #67===================
17-03-02 12:56:46.500 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-03-02 12:56:46.500 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-03-02 12:56:46.500 -08 000000135 INF: ===================Camera #2 Frame #68===================
17-03-02 12:56:46.522 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:46.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:56:46.653 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:56:46.653 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:56:46.653 -08 000000110 INF: ===================Camera #0 Frame #73===================
17-03-02 12:56:46.657 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-03-02 12:56:46.657 -08 000000018 INF: Current Position of Pump is: 0
17-03-02 12:56:46.659 -08 000000092 INF: Y Motor: Unshifted Position: 4667402
17-03-02 12:56:46.673 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-03-02 12:56:46.673 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-03-02 12:56:46.673 -08 000000135 INF: ===================Camera #2 Frame #74===================
17-03-02 12:56:46.709 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:46.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-03-02 12:56:46.821 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-03-02 12:56:46.821 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-03-02 12:56:46.821 -08 000000110 INF: ===================Camera #0 Frame #79===================
17-03-02 12:56:46.832 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:46.842 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-03-02 12:56:46.842 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-03-02 12:56:46.842 -08 000000135 INF: ===================Camera #2 Frame #80===================
17-03-02 12:56:46.843 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:46.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:46.970 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:46.971 -08 000000092 INF: Y Motor: Unshifted Position: 4463726
17-03-02 12:56:46.989 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-03-02 12:56:46.989 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-03-02 12:56:46.989 -08 000000110 INF: ===================Camera #0 Frame #86===================
17-03-02 12:56:47.012 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-03-02 12:56:47.012 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-03-02 12:56:47.012 -08 000000135 INF: ===================Camera #2 Frame #86===================
17-03-02 12:56:47.021 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:47.145 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:47.160 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:56:47.160 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:56:47.160 -08 000000110 INF: ===================Camera #0 Frame #92===================
17-03-02 12:56:47.181 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-03-02 12:56:47.181 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-03-02 12:56:47.181 -08 000000135 INF: ===================Camera #2 Frame #93===================
17-03-02 12:56:47.220 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:47.280 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:47.281 -08 000000092 INF: Y Motor: Unshifted Position: 4262229
17-03-02 12:56:47.328 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:56:47.328 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:56:47.328 -08 000000110 INF: ===================Camera #0 Frame #98===================
17-03-02 12:56:47.331 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:47.353 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-03-02 12:56:47.353 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-03-02 12:56:47.353 -08 000000135 INF: ===================Camera #2 Frame #99===================
17-03-02 12:56:47.380 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-03-02 12:56:47.458 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:47.471 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:47.497 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-03-02 12:56:47.497 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-03-02 12:56:47.497 -08 000000110 INF: ===================Camera #0 Frame #104===================
17-03-02 12:56:47.523 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-03-02 12:56:47.523 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-03-02 12:56:47.523 -08 000000135 INF: ===================Camera #2 Frame #105===================
17-03-02 12:56:47.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:47.594 -08 000000092 INF: Y Motor: Unshifted Position: 4058548
17-03-02 12:56:47.644 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:47.655 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:47.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-03-02 12:56:47.665 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-03-02 12:56:47.665 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-03-02 12:56:47.665 -08 000000110 INF: ===================Camera #0 Frame #110===================
17-03-02 12:56:47.692 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-03-02 12:56:47.692 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-03-02 12:56:47.692 -08 000000135 INF: ===================Camera #2 Frame #111===================
17-03-02 12:56:47.755 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP15360R\r
17-03-02 12:56:47.771 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:47.833 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:56:47.833 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:56:47.833 -08 000000110 INF: ===================Camera #0 Frame #117===================
17-03-02 12:56:47.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:47.861 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-03-02 12:56:47.861 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-03-02 12:56:47.861 -08 000000135 INF: ===================Camera #2 Frame #118===================
17-03-02 12:56:47.905 -08 000000092 INF: Y Motor: Unshifted Position: 3855105
17-03-02 12:56:47.944 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:47.955 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:47.969 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:48.004 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-03-02 12:56:48.004 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-03-02 12:56:48.004 -08 000000110 INF: ===================Camera #0 Frame #123===================
17-03-02 12:56:48.033 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-03-02 12:56:48.033 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-03-02 12:56:48.033 -08 000000135 INF: ===================Camera #2 Frame #124===================
17-03-02 12:56:48.081 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:48.172 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-03-02 12:56:48.172 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-03-02 12:56:48.172 -08 000000110 INF: ===================Camera #0 Frame #129===================
17-03-02 12:56:48.202 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-03-02 12:56:48.202 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-03-02 12:56:48.202 -08 000000135 INF: ===================Camera #2 Frame #130===================
17-03-02 12:56:48.219 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:48.219 -08 000000092 INF: Y Motor: Unshifted Position: 3653385
17-03-02 12:56:48.269 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:48.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:48.340 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-03-02 12:56:48.340 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-03-02 12:56:48.340 -08 000000110 INF: ===================Camera #0 Frame #135===================
17-03-02 12:56:48.371 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-03-02 12:56:48.371 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-03-02 12:56:48.371 -08 000000135 INF: ===================Camera #2 Frame #136===================
17-03-02 12:56:48.392 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:48.508 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141.
17-03-02 12:56:48.508 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141
17-03-02 12:56:48.508 -08 000000110 INF: ===================Camera #0 Frame #141===================
17-03-02 12:56:48.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:48.531 -08 000000092 INF: Y Motor: Unshifted Position: 3449720
17-03-02 12:56:48.541 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-03-02 12:56:48.541 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-03-02 12:56:48.541 -08 000000135 INF: ===================Camera #2 Frame #143===================
17-03-02 12:56:48.581 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:48.591 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:48.678 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-03-02 12:56:48.678 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-03-02 12:56:48.678 -08 000000110 INF: ===================Camera #0 Frame #148===================
17-03-02 12:56:48.707 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:48.716 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-03-02 12:56:48.716 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-03-02 12:56:48.716 -08 000000135 INF: ===================Camera #2 Frame #149===================
17-03-02 12:56:48.841 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:48.842 -08 000000092 INF: Y Motor: Unshifted Position: 3246921
17-03-02 12:56:48.851 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-03-02 12:56:48.851 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-03-02 12:56:48.851 -08 000000110 INF: ===================Camera #0 Frame #154===================
17-03-02 12:56:48.887 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-03-02 12:56:48.887 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-03-02 12:56:48.887 -08 000000135 INF: ===================Camera #2 Frame #155===================
17-03-02 12:56:48.892 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:48.905 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:49.018 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:49.021 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-03-02 12:56:49.021 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-03-02 12:56:49.021 -08 000000110 INF: ===================Camera #0 Frame #160===================
17-03-02 12:56:49.058 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-03-02 12:56:49.058 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-03-02 12:56:49.058 -08 000000135 INF: ===================Camera #2 Frame #162===================
17-03-02 12:56:49.154 -08 000000092 INF: Y Motor: Unshifted Position: 3043904
17-03-02 12:56:49.155 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:49.191 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-03-02 12:56:49.191 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-03-02 12:56:49.191 -08 000000110 INF: ===================Camera #0 Frame #167===================
17-03-02 12:56:49.204 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:49.215 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:49.232 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-03-02 12:56:49.232 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-03-02 12:56:49.232 -08 000000135 INF: ===================Camera #2 Frame #168===================
17-03-02 12:56:49.328 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:49.364 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-03-02 12:56:49.364 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-03-02 12:56:49.364 -08 000000110 INF: ===================Camera #0 Frame #173===================
17-03-02 12:56:49.403 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-03-02 12:56:49.403 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-03-02 12:56:49.403 -08 000000135 INF: ===================Camera #2 Frame #174===================
17-03-02 12:56:49.465 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:49.466 -08 000000092 INF: Y Motor: Unshifted Position: 2841109
17-03-02 12:56:49.516 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:49.529 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:49.534 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-03-02 12:56:49.534 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-03-02 12:56:49.534 -08 000000110 INF: ===================Camera #0 Frame #179===================
17-03-02 12:56:49.574 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-03-02 12:56:49.574 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-03-02 12:56:49.574 -08 000000135 INF: ===================Camera #2 Frame #181===================
17-03-02 12:56:49.642 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:49.704 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-03-02 12:56:49.704 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-03-02 12:56:49.704 -08 000000110 INF: ===================Camera #0 Frame #185===================
17-03-02 12:56:49.748 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-03-02 12:56:49.748 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-03-02 12:56:49.748 -08 000000135 INF: ===================Camera #2 Frame #187===================
17-03-02 12:56:49.778 -08 000000092 INF: Y Motor: Unshifted Position: 2638321
17-03-02 12:56:49.779 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:49.828 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:49.839 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:49.874 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-03-02 12:56:49.874 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-03-02 12:56:49.874 -08 000000110 INF: ===================Camera #0 Frame #192===================
17-03-02 12:56:49.919 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-03-02 12:56:49.919 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-03-02 12:56:49.919 -08 000000135 INF: ===================Camera #2 Frame #193===================
17-03-02 12:56:49.952 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:50.047 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-03-02 12:56:50.047 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-03-02 12:56:50.047 -08 000000110 INF: ===================Camera #0 Frame #198===================
17-03-02 12:56:50.089 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:50.089 -08 000000092 INF: Y Motor: Unshifted Position: 2435304
17-03-02 12:56:50.090 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-03-02 12:56:50.090 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-03-02 12:56:50.090 -08 000000135 INF: ===================Camera #2 Frame #200===================
17-03-02 12:56:50.139 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:50.150 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:50.217 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-03-02 12:56:50.217 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-03-02 12:56:50.217 -08 000000110 INF: ===================Camera #0 Frame #204===================
17-03-02 12:56:50.264 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-03-02 12:56:50.264 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-03-02 12:56:50.264 -08 000000135 INF: ===================Camera #2 Frame #206===================
17-03-02 12:56:50.266 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:50.387 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-03-02 12:56:50.387 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-03-02 12:56:50.387 -08 000000110 INF: ===================Camera #0 Frame #211===================
17-03-02 12:56:50.400 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:50.402 -08 000000092 INF: Y Motor: Unshifted Position: 2231855
17-03-02 12:56:50.435 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-03-02 12:56:50.435 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-03-02 12:56:50.435 -08 000000135 INF: ===================Camera #2 Frame #212===================
17-03-02 12:56:50.452 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:50.463 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:50.560 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-03-02 12:56:50.560 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-03-02 12:56:50.560 -08 000000110 INF: ===================Camera #0 Frame #217===================
17-03-02 12:56:50.577 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:50.606 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-03-02 12:56:50.606 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-03-02 12:56:50.606 -08 000000135 INF: ===================Camera #2 Frame #219===================
17-03-02 12:56:50.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:50.715 -08 000000092 INF: Y Motor: Unshifted Position: 2028839
17-03-02 12:56:50.730 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-03-02 12:56:50.730 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-03-02 12:56:50.730 -08 000000110 INF: ===================Camera #0 Frame #223===================
17-03-02 12:56:50.765 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:50.776 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:50.780 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-03-02 12:56:50.780 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-03-02 12:56:50.780 -08 000000135 INF: ===================Camera #2 Frame #225===================
17-03-02 12:56:50.889 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:50.900 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-03-02 12:56:50.900 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-03-02 12:56:50.900 -08 000000110 INF: ===================Camera #0 Frame #230===================
17-03-02 12:56:50.951 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-03-02 12:56:50.951 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-03-02 12:56:50.951 -08 000000135 INF: ===================Camera #2 Frame #231===================
17-03-02 12:56:51.026 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:51.027 -08 000000092 INF: Y Motor: Unshifted Position: 1826032
17-03-02 12:56:51.073 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-03-02 12:56:51.073 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-03-02 12:56:51.073 -08 000000110 INF: ===================Camera #0 Frame #236===================
17-03-02 12:56:51.077 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:51.086 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:51.121 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-03-02 12:56:51.121 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-03-02 12:56:51.121 -08 000000135 INF: ===================Camera #2 Frame #238===================
17-03-02 12:56:51.203 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:51.243 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-03-02 12:56:51.243 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-03-02 12:56:51.243 -08 000000110 INF: ===================Camera #0 Frame #242===================
17-03-02 12:56:51.296 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-03-02 12:56:51.296 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-03-02 12:56:51.296 -08 000000135 INF: ===================Camera #2 Frame #244===================
17-03-02 12:56:51.339 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:51.340 -08 000000092 INF: Y Motor: Unshifted Position: 1623013
17-03-02 12:56:51.390 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:51.399 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:51.414 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-03-02 12:56:51.414 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-03-02 12:56:51.414 -08 000000110 INF: ===================Camera #0 Frame #248===================
17-03-02 12:56:51.467 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-03-02 12:56:51.467 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-03-02 12:56:51.467 -08 000000135 INF: ===================Camera #2 Frame #250===================
17-03-02 12:56:51.516 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:51.584 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-03-02 12:56:51.584 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-03-02 12:56:51.584 -08 000000110 INF: ===================Camera #0 Frame #255===================
17-03-02 12:56:51.638 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-03-02 12:56:51.638 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-03-02 12:56:51.638 -08 000000135 INF: ===================Camera #2 Frame #257===================
17-03-02 12:56:51.649 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:51.651 -08 000000092 INF: Y Motor: Unshifted Position: 1420864
17-03-02 12:56:51.701 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:51.711 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:51.757 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-03-02 12:56:51.757 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-03-02 12:56:51.757 -08 000000110 INF: ===================Camera #0 Frame #261===================
17-03-02 12:56:51.812 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-03-02 12:56:51.812 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-03-02 12:56:51.812 -08 000000135 INF: ===================Camera #2 Frame #263===================
17-03-02 12:56:51.828 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:51.927 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-03-02 12:56:51.927 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-03-02 12:56:51.927 -08 000000110 INF: ===================Camera #0 Frame #267===================
17-03-02 12:56:51.961 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:51.964 -08 000000092 INF: Y Motor: Unshifted Position: 1217197
17-03-02 12:56:51.983 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-03-02 12:56:51.983 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-03-02 12:56:51.983 -08 000000135 INF: ===================Camera #2 Frame #269===================
17-03-02 12:56:52.014 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:52.025 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:52.086 -08 000000096 INF: FPGA: Recv TDIYWAIT
17-03-02 12:56:52.086 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:52.088 -08 000000034 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:56:52.089 -08 000000032 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:56:52.089 -08 000000112 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:56:52.089 -08 000000032 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:56:52.089 -08 000000032 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:56:52.089 -08 000000032 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:56:52.089 -08 000000032 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:56:52.089 -08 000000112 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:56:52.089 -08 000000112 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:56:52.089 -08 000000112 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:56:52.090 -08 000000112 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:56:52.097 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:56:52.097 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:56:52.097 -08 000000110 INF: ===================Camera #0 Frame #272===================
17-03-02 12:56:52.113 -08 000000110 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:56:52.114 -08 000000110 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:52.138 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:52.248 -08 000000110 INF: Camera #0 ReleaseBuffer
17-03-02 12:56:52.248 -08 000000135 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:56:52.248 -08 000000135 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:56:52.248 -08 000000135 INF: ===================Camera #2 Frame #272===================
17-03-02 12:56:52.248 -08 000000110 INF: ===================Camera TDI===================
17-03-02 12:56:52.257 -08 000000135 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:56:52.258 -08 000000135 INF: ===================CameraTDI Cleanup===================
17-03-02 12:56:52.274 -08 000000092 INF: Y Motor: Unshifted Position: 1014175
17-03-02 12:56:52.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:52.277 -08 000000110 INF: ======================================
17-03-02 12:56:52.324 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:52.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:52.425 -08 000000135 INF: Camera #2 ReleaseBuffer
17-03-02 12:56:52.426 -08 000000135 INF: ===================Camera TDI===================
17-03-02 12:56:52.460 -08 000000135 INF: ======================================
17-03-02 12:56:52.461 -08 000000111 INF: FPGA: Recv EX2MV
17-03-02 12:56:52.461 -08 000000111 INF: FPGA: Recv EX1MV
17-03-02 12:56:52.461 -08 000000032 INF: Excitation Filter 2: Moved 107 steps in 372.1051 ms
17-03-02 12:56:52.461 -08 000000032 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.2187 ms
17-03-02 12:56:52.461 -08 000000032 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2914 ms
17-03-02 12:56:52.461 -08 000000112 INF: Excitation Filter 1: Moved 107 steps in 371.9522 ms
17-03-02 12:56:52.461 -08 000000112 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.3643 ms
17-03-02 12:56:52.461 -08 000000112 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.4818 ms
17-03-02 12:56:52.461 -08 000000032 INF: ======================================
17-03-02 12:56:52.462 -08 000000025 INF: ===================Camera TDI===================
17-03-02 12:56:52.462 -08 000000112 INF: ======================================
17-03-02 12:56:52.463 -08 000000092 INF: Y Motor: Unshifted Position: 992268
17-03-02 12:56:52.463 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:52.463 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:52.463 -08 000000025 INF: ======================================
17-03-02 12:56:52.463 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:52.464 -08 000000034 INF: ======================================
17-03-02 12:56:52.525 -08 000000092 INF: Y Motor: Recv v 0\r
17-03-02 12:56:52.525 -08 000000092 INF: Y Motor: Moved to 14.9227 after 7879 ms
17-03-02 12:56:52.525 -08 000000092 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:52.624 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:52.629 -08 000000092 INF: Y Motor: Recv v 4097\r
17-03-02 12:56:52.629 -08 000000092 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:52.629 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:52.681 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:52.682 -08 000000092 INF: Y Motor: Recv v 0\r
17-03-02 12:56:52.682 -08 000000092 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:52.682 -08 000000092 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:52.743 -08 000000092 INF: Y Motor: Recv v 134217728\r
17-03-02 12:56:52.743 -08 000000092 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:56:52.743 -08 000000092 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:52.743 -08 000000092 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:52.805 -08 000000092 INF: Y Motor: Recv v 0\r
17-03-02 12:56:52.805 -08 000000092 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:52.805 -08 000000092 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:52.805 -08 000000092 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:52.868 -08 000000092 INF: Y Motor: Recv ok\r
17-03-02 12:56:52.868 -08 000000092 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:52.868 -08 000000092 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:52.930 -08 000000092 INF: Y Motor: Recv ok\r
17-03-02 12:56:52.930 -08 000000092 INF: ======================================
17-03-02 12:56:52.931 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:52.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:52.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:56:52.934 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:52.934 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:56:52.992 -08 000000071 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:56:52.992 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:52.993 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:53.054 -08 000000068 INF: FPGA: Recv TDIYERD 1492269
17-03-02 12:56:53.054 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:56:53.116 -08 000000092 INF: FPGA: Recv ZADCR 34929
17-03-02 12:56:53.116 -08 000000042 INF: At scan end Y pos = 14.923 and Z pos = -0.134. Y moved -48.539 mm
17-03-02 12:56:53.116 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:56:53.177 -08 000000096 INF: FPGA: Recv TDIPULSES 139265
17-03-02 12:56:53.177 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-03-02 12:56:53.177 -08 000000042 INF: TDIScan finished after 12826.2093 ms
17-03-02 12:56:53.177 -08 000000042 INF: Image[0]: Y should trigger at 63.462 mm, 2nd row was at 64.371 mm (error = 0.909 mm)
17-03-02 12:56:53.177 -08 000000042 INF: Image[2]: Y should trigger at 63.462 mm, 2nd row was at 64.371 mm (error = 0.909 mm)
17-03-02 12:56:53.179 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:53.214 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.719 um
17-03-02 12:56:53.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:53.215 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:56:53.239 -08 000000078 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:56:53.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:53.240 -08 000000095 INF: ===================Dither Clean Up Command===================
17-03-02 12:56:53.240 -08 000000112 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:56:53.240 -08 000000102 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:56:53.241 -08 000000065 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:56:53.241 -08 000000102 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:56:53.241 -08 000000102 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:56:53.241 -08 000000065 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:56:53.241 -08 000000065 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:56:53.241 -08 000000112 INF: ======================================
17-03-02 12:56:53.241 -08 000000136 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:56:53.241 -08 000000111 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:53.242 -08 000000136 INF: FPGA: Xmit ZSEL 0\n
17-03-02 12:56:53.243 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:53.245 -08 000000111 INF: ===================LFT:Extracting coords===================
17-03-02 12:56:53.270 -08 000000111 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:53.271 -08 000000111 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-03-02 12:56:53.272 -08 000000044 INF: ===================LookupFocusTracking===================
17-03-02 12:56:53.272 -08 000000133 INF: ===================LookupFocusTracking===================
17-03-02 12:56:53.272 -08 000000068 INF: ===================LookupFocusTracking===================
17-03-02 12:56:53.272 -08 000000119 INF: ===================LookupFocusTracking===================
17-03-02 12:56:53.272 -08 000000044 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:53.272 -08 000000133 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:53.272 -08 000000068 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:53.272 -08 000000119 INF: ===================Lookup Focus Tracking===================
17-03-02 12:56:53.303 -08 000000071 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:53.303 -08 000000071 INF: FPGA: Recv ZSEL 
17-03-02 12:56:53.303 -08 000000136 INF: FPGA: Xmit ZDACW 40080\n
17-03-02 12:56:53.304 -08 000000065 INF: ======================================
17-03-02 12:56:53.304 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:53.306 -08 000000102 INF: Y Motor: Recv ok\r
17-03-02 12:56:53.306 -08 000000102 INF: ======================================
17-03-02 12:56:53.346 -08 000000044 INF: FC:B, C:161,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:53.346 -08 000000133 INF: FC:B, C:161,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:53.346 -08 000000068 INF: FC:B, C:161,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:53.346 -08 000000119 INF: FC:B, C:161,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:56:53.365 -08 000000135 INF: FPGA: Recv ZDACW 
17-03-02 12:56:53.366 -08 000000136 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-03-02 12:56:53.366 -08 000000136 INF: FPGA: Xmit TDIBB 0\n
17-03-02 12:56:53.426 -08 000000092 INF: FPGA: Recv TDIBB
17-03-02 12:56:53.426 -08 000000136 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:56:53.427 -08 000000136 INF: ======================================
17-03-02 12:56:53.497 -08 000000044 INF: LFT found best fwhm score 2.04298 in 151 ms
17-03-02 12:56:53.497 -08 000000133 INF: LFT found best fwhm score 2.000171 in 151 ms
17-03-02 12:56:53.497 -08 000000133 INF: LFT found good score at index 7189 with fwhm value 2.000171. Next cycle, cycle 162 starting Z position for top surface is at -0.157 mm FC:B, C:161,L:2,T
17-03-02 12:56:53.497 -08 000000044 INF: LFT found good score at index 4277 with fwhm value 2.04298. Next cycle, cycle 162 starting Z position for top surface is at -0.157 mm FC:B, C:161,L:2,T
17-03-02 12:56:53.498 -08 000000133 INF: ===================LookupFocusTracking===================
17-03-02 12:56:53.498 -08 000000044 INF: ===================LookupFocusTracking===================
17-03-02 12:56:53.498 -08 000000119 INF: LFT found best fwhm score 2.337185 in 152 ms
17-03-02 12:56:53.498 -08 000000119 INF: LFT found good score at index 4277 with fwhm value 2.337185. Next cycle, cycle 162 starting Z position for top surface is at -0.157 mm FC:B, C:161,L:2,T
17-03-02 12:56:53.498 -08 000000133 INF: ======================================
17-03-02 12:56:53.498 -08 000000044 INF: ======================================
17-03-02 12:56:53.498 -08 000000119 INF: ===================LookupFocusTracking===================
17-03-02 12:56:53.498 -08 000000068 INF: LFT found best fwhm score 2.043254 in 151 ms
17-03-02 12:56:53.498 -08 000000068 INF: LFT found good score at index 8861 with fwhm value 2.043254. Next cycle, cycle 162 starting Z position for top surface is at -0.157 mm FC:B, C:161,L:2,T
17-03-02 12:56:53.498 -08 000000119 INF: ======================================
17-03-02 12:56:53.498 -08 000000068 INF: ===================LookupFocusTracking===================
17-03-02 12:56:53.499 -08 000000068 INF: ======================================
17-03-02 12:56:53.499 -08 000000111 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:56:53.500 -08 000000111 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:161,L:2,T
17-03-02 12:56:53.500 -08 000000111 INF: ======================================
17-03-02 12:56:53.502 -08 000000095 INF: ======================================
17-03-02 12:56:53.503 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:53.503 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:56:53.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:53.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:56:53.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:53.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:56:53.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:53.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:56:53.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:56:53.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-03-02 12:56:53.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-03-02 12:56:53.506 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB, Waiting for image analysis===================
17-03-02 12:56:53.506 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-03-02 12:56:53.506 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Waiting for image analysis===================
17-03-02 12:56:53.506 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-03-02 12:56:53.529 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-03-02 12:56:53.529 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:53.529 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:53.529 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:53.530 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-03-02 12:56:53.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 2===================
17-03-02 12:56:53.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface===================
17-03-02 12:56:53.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:56:53.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:56:53.612 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:56:53.612 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:56:53.613 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:53.616 -08 000000112 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1203 Request: {"Cycle":161,"Lane":2,"Tile":1203,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF249","HCSMMF228","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.713 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:56:53.713 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:56:53.714 -08 000000042 INF: Compensator: Moving OutOfPath
17-03-02 12:56:53.714 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-03-02 12:56:53.890 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1202 Request: {"Cycle":161,"Lane":2,"Tile":1202,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF179","HCSMMF230","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:53.894 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1210 Request: {"Cycle":161,"Lane":2,"Tile":1210,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF242","HCSMMF177","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.896 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1201 Request: {"Cycle":161,"Lane":2,"Tile":1201,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF272","HCSMMF234","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.897 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1209 Request: {"Cycle":161,"Lane":2,"Tile":1209,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF189","HCSMMF220","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.900 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1225 Request: {"Cycle":161,"Lane":2,"Tile":1225,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF248","HCSMMF245","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.901 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1218 Request: {"Cycle":161,"Lane":2,"Tile":1218,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF193","HCSMMF212","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.903 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1205 Request: {"Cycle":161,"Lane":2,"Tile":1205,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF216","HCSMMF266","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.903 -08 000000136 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1208 Request: {"Cycle":161,"Lane":2,"Tile":1208,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF205","HCSMMF190","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.904 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1207 Request: {"Cycle":161,"Lane":2,"Tile":1207,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF211","HCSMMF202","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.905 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1227 Request: {"Cycle":161,"Lane":2,"Tile":1227,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF260","HCSMMF285","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.906 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1220 Request: {"Cycle":161,"Lane":2,"Tile":1220,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF238","HCSMMF197","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.907 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1214 Request: {"Cycle":161,"Lane":2,"Tile":1214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF250","HCSMMF237","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.907 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1221 Request: {"Cycle":161,"Lane":2,"Tile":1221,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF255","HCSMMF191","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.908 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1211 Request: {"Cycle":161,"Lane":2,"Tile":1211,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF254","HCSMMF226","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.909 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1217 Request: {"Cycle":161,"Lane":2,"Tile":1217,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF221","HCSMMF206","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.909 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1204 Request: {"Cycle":161,"Lane":2,"Tile":1204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF261","HCSMMF270","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.910 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1213 Request: {"Cycle":161,"Lane":2,"Tile":1213,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF203","HCSMMF195","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.911 -08 000000135 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1223 Request: {"Cycle":161,"Lane":2,"Tile":1223,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF232","HCSMMF223","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.911 -08 000000116 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1219 Request: {"Cycle":161,"Lane":2,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF257","HCSMMF274","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.913 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1212 Request: {"Cycle":161,"Lane":2,"Tile":1212,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF233","HCSMMF231","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.914 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1228 Request: {"Cycle":161,"Lane":2,"Tile":1228,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF247","HCSMMF225","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.915 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1215 Request: {"Cycle":161,"Lane":2,"Tile":1215,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF224","HCSMMF207","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.915 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1222 Request: {"Cycle":161,"Lane":2,"Tile":1222,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF227","HCSMMF209","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.916 -08 000000134 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1206 Request: {"Cycle":161,"Lane":2,"Tile":1206,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF200","HCSMMF268","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.917 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1216 Request: {"Cycle":161,"Lane":2,"Tile":1216,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF213","HCSMMF243","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.918 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1224 Request: {"Cycle":161,"Lane":2,"Tile":1224,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF283","HCSMMF204","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.920 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 161 Tile: 1226 Request: {"Cycle":161,"Lane":2,"Tile":1226,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF188","HCSMMF192","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:56:53.922 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:53.928 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-03-02 12:56:54.022 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:54.022 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-03-02 12:56:54.129 -08 000000088 INF: FPGA: Recv MIOCOMPR
17-03-02 12:56:54.129 -08 000000042 INF: Compensator: Moved OutOfPath in 415 ms
17-03-02 12:56:54.129 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543
17-03-02 12:56:54.130 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:56:54.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:56:54.132 -08 000000133 INF: ===================Move Tilt Motor 1===================
17-03-02 12:56:54.132 -08 000000122 INF: ===================Move Tilt Motor 3===================
17-03-02 12:56:54.132 -08 000000116 INF: ===================Move Tilt Motor 2===================
17-03-02 12:56:54.132 -08 000000133 INF: ======================================
17-03-02 12:56:54.132 -08 000000122 INF: ======================================
17-03-02 12:56:54.133 -08 000000116 INF: ======================================
17-03-02 12:56:54.133 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:56:54.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:56:54.140 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-03-02 12:56:54.142 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:54.149 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-03-02 12:56:54.149 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-03-02 12:56:54.149 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-03-02 12:56:54.149 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:56:54.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:56:54.153 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-03-02 12:56:54.153 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-03-02 12:56:54.153 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-03-02 12:56:54.191 -08 000000123 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:54.191 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:56:54.192 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:54.192 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:56:54.192 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1529 mm
17-03-02 12:56:54.192 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-03-02 12:56:54.205 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:54.211 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-03-02 12:56:54.255 -08 000000134 INF: FPGA: Recv ZTRG 
17-03-02 12:56:54.255 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-03-02 12:56:54.312 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:54.317 -08 000000078 INF: FPGA: Recv ZYT 
17-03-02 12:56:54.317 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-03-02 12:56:54.317 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-03-02 12:56:54.318 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-03-02 12:56:54.379 -08 000000123 INF: FPGA: Recv @LOG Trigger Camera
17-03-02 12:56:54.379 -08 000000123 INF: FPGA: Recv ZMV 
17-03-02 12:56:54.379 -08 000000006 INF: FPGA: Trigger Camera
17-03-02 12:56:54.379 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9435 ms
17-03-02 12:56:54.379 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-03-02 12:56:54.417 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:54.423 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-03-02 12:56:54.440 -08 000000072 INF: FPGA: Recv ZDACR 60292
17-03-02 12:56:54.440 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.2732 ms w/comms
17-03-02 12:56:54.440 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:56:54.440 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.4728 ms
17-03-02 12:56:54.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:56:54.441 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-03-02 12:56:54.442 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:54.450 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-03-02 12:56:54.450 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:56:54.450 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:56:54.450 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-03-02 12:56:54.450 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-03-02 12:56:54.506 -08 000000078 INF: FPGA: Recv ZSTEP 
17-03-02 12:56:54.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:54.521 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:56:54.528 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:56:54.528 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-03-02 12:56:54.536 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-03-02 12:56:54.536 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:56:54.537 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:56:54.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:54.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-03-02 12:56:54.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:54.539 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-03-02 12:56:54.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:54.540 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:54.541 -08 000000128 INF: ===================Move X,Y===================
17-03-02 12:56:54.541 -08 000000123 INF: ===================MoveEmissionFilters===================
17-03-02 12:56:54.542 -08 000000128 INF: ===================Move X,Y, Parallel===================
17-03-02 12:56:54.542 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:54.542 -08 000000097 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:54.542 -08 000000044 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:54.542 -08 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:54.542 -08 000000108 INF: ===================Move X Motor without settling===================
17-03-02 12:56:54.543 -08 000000110 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:54.543 -08 000000108 INF: X Motor: Xmit PR VM\n
17-03-02 12:56:54.543 -08 000000097 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:54.543 -08 000000110 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9227 mm
17-03-02 12:56:54.543 -08 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:56:54.543 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:54.543 -08 000000044 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:56:54.543 -08 000000110 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:54.543 -08 000000110 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:54.544 -08 000000098 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:56:54.544 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:56:54.544 -08 000000133 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:56:54.544 -08 000000045 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:56:54.544 -08 000000033 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:56:54.544 -08 000000054 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:56:54.544 -08 000000050 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:56:54.544 -08 000000098 INF: ======================================
17-03-02 12:56:54.544 -08 000000057 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:56:54.544 -08 000000054 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:56:54.545 -08 000000045 INF: ======================================
17-03-02 12:56:54.545 -08 000000033 INF: ======================================
17-03-02 12:56:54.545 -08 000000057 INF: ======================================
17-03-02 12:56:54.545 -08 000000052 INF: ======================================
17-03-02 12:56:54.545 -08 000000050 INF: ======================================
17-03-02 12:56:54.546 -08 000000097 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:56:54.547 -08 000000044 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:56:54.547 -08 000000133 INF: ======================================
17-03-02 12:56:54.547 -08 000000054 INF: ======================================
17-03-02 12:56:54.548 -08 000000097 INF: ======================================
17-03-02 12:56:54.548 -08 000000044 INF: ======================================
17-03-02 12:56:54.548 -08 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:56:54.549 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:56:54.550 -08 000000060 INF: ======================================
17-03-02 12:56:54.550 -08 000000102 INF: ======================================
17-03-02 12:56:54.551 -08 000000123 INF: ======================================
17-03-02 12:56:54.629 -08 000000110 INF: Y Motor: Recv ok\r
17-03-02 12:56:54.629 -08 000000110 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:54.629 -08 000000110 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:54.629 -08 000000108 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:56:54.629 -08 000000108 INF: X Motor: Xmit PR VI\n
17-03-02 12:56:54.695 -08 000000108 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:56:54.695 -08 000000108 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:56:54.695 -08 000000108 INF: X Motor: Moving to 74.7156 mm @15.000 mm/sec, started at 72.4814 mm
17-03-02 12:56:54.695 -08 000000108 INF: X Motor: Xmit MA 6437\n
17-03-02 12:56:54.696 -08 000000110 INF: Y Motor: Recv ok\r
17-03-02 12:56:54.696 -08 000000110 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:54.756 -08 000000110 INF: Y Motor: Recv v 0\r
17-03-02 12:56:54.756 -08 000000108 INF: X Motor: Recv MA 6437\r\n>
17-03-02 12:56:54.756 -08 000000110 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:54.756 -08 000000108 INF: X Motor: WaitUntilStopped 60149
17-03-02 12:56:54.756 -08 000000110 INF: Y Motor: Set target position to 5953351 encoder counts
17-03-02 12:56:54.756 -08 000000110 INF: Y Motor: Xmit s r0xca 5953351\r
17-03-02 12:56:54.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:54.806 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-03-02 12:56:54.818 -08 000000110 INF: Y Motor: Recv ok\r
17-03-02 12:56:54.818 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:54.818 -08 000000110 INF: Y Motor: Start the move command
17-03-02 12:56:54.818 -08 000000110 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:54.882 -08 000000110 INF: Y Motor: Recv ok\r
17-03-02 12:56:54.882 -08 000000110 INF: Y Motor: WaitUntilStopped 61984
17-03-02 12:56:54.882 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:55.003 -08 000000110 INF: Y Motor: Unshifted Position: 1076378
17-03-02 12:56:55.053 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:55.068 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:55.130 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:55.183 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:55.316 -08 000000110 INF: Y Motor: Unshifted Position: 1781425
17-03-02 12:56:55.366 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:55.378 -08 000000108 INF: X Motor: Xmit PR ER\n
17-03-02 12:56:55.380 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:55.440 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:55.441 -08 000000108 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:56:55.441 -08 000000108 INF: X Motor: Moved to 74.7153 after 685 ms
17-03-02 12:56:55.441 -08 000000108 INF: ======================================
17-03-02 12:56:55.491 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:55.629 -08 000000110 INF: Y Motor: Unshifted Position: 2562289
17-03-02 12:56:55.679 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:55.690 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:55.755 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:55.806 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:55.941 -08 000000110 INF: Y Motor: Unshifted Position: 3343071
17-03-02 12:56:55.991 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:56.005 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:56.066 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:56.116 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:56.253 -08 000000110 INF: Y Motor: Unshifted Position: 4123132
17-03-02 12:56:56.303 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:56.316 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:56.379 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:56.428 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:56.566 -08 000000110 INF: Y Motor: Unshifted Position: 4898904
17-03-02 12:56:56.616 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:56.629 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:56.691 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:56.742 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:56.878 -08 000000110 INF: Y Motor: Unshifted Position: 5677562
17-03-02 12:56:56.928 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:56.941 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:57.001 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:57.055 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:57.190 -08 000000110 INF: Y Motor: Unshifted Position: 5953352
17-03-02 12:56:57.190 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:56:57.190 -08 000000110 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:57.252 -08 000000110 INF: Y Motor: Recv v 0\r
17-03-02 12:56:57.252 -08 000000110 INF: Y Motor: Moved to 64.5335 after 2370 ms
17-03-02 12:56:57.252 -08 000000110 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:56:57.252 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:57.314 -08 000000110 INF: Y Motor: Recv v 4096\r
17-03-02 12:56:57.314 -08 000000110 INF: Y Motor: Status After move finished OK:
17-03-02 12:56:57.314 -08 000000110 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:57.314 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:57.378 -08 000000110 INF: Y Motor: Recv v 0\r
17-03-02 12:56:57.378 -08 000000110 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:57.378 -08 000000110 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:56:57.441 -08 000000110 INF: Y Motor: Recv v 402653184\r
17-03-02 12:56:57.441 -08 000000110 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:56:57.441 -08 000000110 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:56:57.441 -08 000000110 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:56:57.500 -08 000000110 INF: Y Motor: Recv v 0\r
17-03-02 12:56:57.500 -08 000000110 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:56:57.500 -08 000000110 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:56:57.500 -08 000000110 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:57.562 -08 000000110 INF: Y Motor: Recv ok\r
17-03-02 12:56:57.562 -08 000000110 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:56:57.562 -08 000000110 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:57.564 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:57.627 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:57.631 -08 000000110 INF: Y Motor: Recv ok\r
17-03-02 12:56:57.632 -08 000000110 INF: ======================================
17-03-02 12:56:57.633 -08 000000128 INF: ===================Move X,Y===================
17-03-02 12:56:57.635 -08 000000128 INF: ======================================
17-03-02 12:56:57.636 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:56:57.638 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:57.638 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-03-02 12:56:57.638 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-03-02 12:56:57.688 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:56:57.688 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-03-02 12:56:57.749 -08 000000083 INF: FPGA: Recv ZFREQCL
17-03-02 12:56:57.749 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:56:57.750 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:57.750 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:56:57.811 -08 000000052 INF: FPGA: Recv TDIYERD 6453352
17-03-02 12:56:57.811 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-03-02 12:56:57.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:57.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:57.813 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:56:57.813 -08 000000112 INF: ===================Set YMotor gains for scans===================
17-03-02 12:56:57.814 -08 000000112 INF: ======================================
17-03-02 12:56:57.814 -08 000000071 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:56:57.814 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:56:57.816 -08 000000071 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:56:57.816 -08 000000071 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:56:57.817 -08 000000071 INF: FPGA: Xmit TDIYPOS 6433351\n
17-03-02 12:56:57.873 -08 000000032 INF: FPGA: Recv TDIYPOS
17-03-02 12:56:57.873 -08 000000071 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:56:57.875 -08 000000071 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:56:57.876 -08 000000071 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-03-02 12:56:57.877 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:57.934 -08 000000054 INF: FPGA: Recv TDIYARM2
17-03-02 12:56:57.934 -08 000000071 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:56:57.936 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:56:57.936 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:56:57.937 -08 000000071 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:56:57.937 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:56:57.939 -08 000000071 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-03-02 12:56:57.940 -08 000000071 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:56:57.941 -08 000000071 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:58.186 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:56:58.249 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:56:58.249 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:56:58.250 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:56:58.250 -08 000000018 INF: WaitCommand(5000) start
17-03-02 12:56:58.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left===================
17-03-02 12:56:58.308 -08 000000071 INF: Camera #0 AttachBuffer (imageDataPtr = 69126516224 imgPtr = 69126516224 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-03-02 12:56:58.308 -08 000000071 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-03-02 12:56:58.308 -08 000000071 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:58.323 -08 000000071 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:56:58.344 -08 000000071 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:56:58.723 -08 000000071 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53833692544 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-03-02 12:56:58.723 -08 000000071 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-03-02 12:56:58.723 -08 000000071 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:56:58.738 -08 000000071 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:56:58.740 -08 000000071 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-03-02 12:56:58.741 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:56:58.743 -08 000000071 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:58.743 -08 000000071 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:56:58.744 -08 000000071 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:58.745 -08 000000071 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:56:58.745 -08 000000071 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:56:58.745 -08 000000071 INF: Z Motor: Arming to move to -0.0100 mm
17-03-02 12:56:58.746 -08 000000071 INF: FPGA: Xmit ZYT 0 2\n
17-03-02 12:56:58.810 -08 000000116 INF: FPGA: Recv ZYT 
17-03-02 12:56:58.810 -08 000000071 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-03-02 12:56:58.810 -08 000000071 INF: FPGA: Xmit ZARM 2621\n
17-03-02 12:56:58.871 -08 000000034 INF: FPGA: Recv ZARM
17-03-02 12:56:58.871 -08 000000071 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.8098 ms
17-03-02 12:56:58.871 -08 000000071 INF: Z Motor: ArmAbsStepped took 125.6138 ms
17-03-02 12:56:58.872 -08 000000071 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:56:58.873 -08 000000071 INF: ===================TDI Scan Setup===================
17-03-02 12:56:58.874 -08 000000071 INF: ======================================
17-03-02 12:56:58.875 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:56:58.876 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:56:58.876 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:58.877 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:58.878 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:58.878 -08 000000105 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:56:58.879 -08 000000086 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:56:58.879 -08 000000105 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:56:58.879 -08 000000105 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:56:58.879 -08 000000105 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:56:58.879 -08 000000105 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:56:58.879 -08 000000086 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:56:58.879 -08 000000086 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:56:58.879 -08 000000086 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:56:58.880 -08 000000086 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:56:59.246 -08 000000138 INF: FPGA: Recv EX2MV
17-03-02 12:56:59.246 -08 000000105 INF: Excitation Filter 2: Moved -107 steps in 367.2116 ms
17-03-02 12:56:59.246 -08 000000105 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.3279 ms
17-03-02 12:56:59.246 -08 000000105 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.4028 ms
17-03-02 12:56:59.246 -08 000000105 INF: ======================================
17-03-02 12:56:59.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:56:59.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left===================
17-03-02 12:56:59.308 -08 000000028 INF: FPGA: Recv EX1MV
17-03-02 12:56:59.308 -08 000000086 INF: Excitation Filter 1: Moved -107 steps in 429.33 ms
17-03-02 12:56:59.308 -08 000000086 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.4847 ms
17-03-02 12:56:59.308 -08 000000086 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.6079 ms
17-03-02 12:56:59.309 -08 000000086 INF: ======================================
17-03-02 12:56:59.310 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:59.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:56:59.313 -08 000000122 INF: ===================Serial===================
17-03-02 12:56:59.313 -08 000000034 INF: ===================Camera TDI===================
17-03-02 12:56:59.313 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:56:59.313 -08 000000074 INF: ===================Move Y Motor without settling===================
17-03-02 12:56:59.313 -08 000000074 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-03-02 12:56:59.313 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:56:59.313 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:56:59.313 -08 000000122 INF: ===================Serial, FPGA Z Wait===================
17-03-02 12:56:59.313 -08 000000034 INF: ===================Camera TDI, Parallel===================
17-03-02 12:56:59.314 -08 000000050 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:56:59.314 -08 000000122 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:56:59.314 -08 000000098 INF: ===================Camera TDI===================
17-03-02 12:56:59.314 -08 000000133 INF: ===================Camera TDI===================
17-03-02 12:56:59.316 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:59.316 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:59.316 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:59.316 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:59.319 -08 000000050 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:56:59.373 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:56:59.373 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:56:59.373 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:56:59.434 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:56:59.434 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:56:59.466 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:59.466 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:59.467 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:59.467 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:59.496 -08 000000074 INF: Y Motor: Recv v 0\r
17-03-02 12:56:59.496 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:56:59.496 -08 000000074 INF: Y Motor: Set target position to 5797042 encoder counts
17-03-02 12:56:59.496 -08 000000074 INF: Y Motor: Xmit s r0xca 5797042\r
17-03-02 12:56:59.561 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:56:59.561 -08 000000074 INF: Y Motor: Start the move command
17-03-02 12:56:59.561 -08 000000074 INF: Y Motor: Xmit t 1\r
17-03-02 12:56:59.616 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:59.616 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:59.617 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:59.617 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:59.623 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:56:59.623 -08 000000074 INF: Y Motor: WaitUntilStopped 61042
17-03-02 12:56:59.623 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:59.747 -08 000000074 INF: Y Motor: Unshifted Position: 5935334
17-03-02 12:56:59.766 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:59.766 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:59.767 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:56:59.767 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:56:59.797 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:56:59.916 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-03-02 12:56:59.916 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-03-02 12:56:59.916 -08 000000098 INF: ===================Camera #0 Frame #1===================
17-03-02 12:56:59.917 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-03-02 12:56:59.917 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-03-02 12:56:59.917 -08 000000133 INF: ===================Camera #2 Frame #1===================
17-03-02 12:56:59.921 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:00.060 -08 000000074 INF: Y Motor: Unshifted Position: 5888379
17-03-02 12:57:00.069 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-03-02 12:57:00.069 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-03-02 12:57:00.069 -08 000000098 INF: ===================Camera #0 Frame #3===================
17-03-02 12:57:00.070 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-03-02 12:57:00.070 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-03-02 12:57:00.070 -08 000000133 INF: ===================Camera #2 Frame #3===================
17-03-02 12:57:00.110 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:00.225 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:57:00.225 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:57:00.225 -08 000000098 INF: ===================Camera #0 Frame #4===================
17-03-02 12:57:00.226 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:57:00.226 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:57:00.226 -08 000000133 INF: ===================Camera #2 Frame #4===================
17-03-02 12:57:00.234 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:00.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:57:00.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left===================
17-03-02 12:57:00.370 -08 000000074 INF: Y Motor: Unshifted Position: 5841520
17-03-02 12:57:00.378 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:00.378 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:00.378 -08 000000098 INF: ===================Camera #0 Frame #5===================
17-03-02 12:57:00.379 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:00.379 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:00.379 -08 000000133 INF: ===================Camera #2 Frame #5===================
17-03-02 12:57:00.420 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:00.430 -08 000000036 INF: FPGA: Recv ZWAIT 
17-03-02 12:57:00.430 -08 000000122 INF: ===================Serial===================
17-03-02 12:57:00.432 -08 000000122 INF: ===================Serial, Confirm position Z Motor===================
17-03-02 12:57:00.433 -08 000000122 INF: ===================Serial===================
17-03-02 12:57:00.434 -08 000000122 INF: ======================================
17-03-02 12:57:00.497 -08 000000062 INF: FPGA: Recv TDIYWAIT
17-03-02 12:57:00.498 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:00.500 -08 000000050 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:57:00.501 -08 000000052 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:57:00.501 -08 000000029 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:57:00.501 -08 000000052 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:57:00.501 -08 000000052 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:57:00.501 -08 000000052 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:57:00.501 -08 000000029 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:57:00.501 -08 000000052 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:57:00.501 -08 000000029 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:57:00.501 -08 000000029 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:57:00.505 -08 000000029 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:57:00.531 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-03-02 12:57:00.531 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-03-02 12:57:00.531 -08 000000098 INF: ===================Camera #0 Frame #6===================
17-03-02 12:57:00.532 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-03-02 12:57:00.532 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-03-02 12:57:00.532 -08 000000133 INF: ===================Camera #2 Frame #6===================
17-03-02 12:57:00.534 -08 000000098 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-03-02 12:57:00.535 -08 000000098 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:00.535 -08 000000133 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-03-02 12:57:00.536 -08 000000133 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:00.547 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:00.558 -08 000000098 INF: Camera #0 ReleaseBuffer
17-03-02 12:57:00.558 -08 000000098 INF: ===================Camera TDI===================
17-03-02 12:57:00.559 -08 000000098 INF: ======================================
17-03-02 12:57:00.582 -08 000000133 INF: Camera #2 ReleaseBuffer
17-03-02 12:57:00.582 -08 000000133 INF: ===================Camera TDI===================
17-03-02 12:57:00.583 -08 000000133 INF: ======================================
17-03-02 12:57:00.585 -08 000000034 INF: ===================Camera TDI===================
17-03-02 12:57:00.586 -08 000000034 INF: ======================================
17-03-02 12:57:00.683 -08 000000074 INF: Y Motor: Unshifted Position: 5797064
17-03-02 12:57:00.733 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:00.870 -08 000000074 INF: Y Motor: Unshifted Position: 5797043
17-03-02 12:57:00.870 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:00.870 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:00.932 -08 000000053 INF: FPGA: Recv EX1MV
17-03-02 12:57:00.932 -08 000000053 INF: FPGA: Recv EX2MV
17-03-02 12:57:00.932 -08 000000052 INF: Excitation Filter 1: Moved 107 steps in 430.9807 ms
17-03-02 12:57:00.932 -08 000000029 INF: Excitation Filter 2: Moved 107 steps in 430.8518 ms
17-03-02 12:57:00.932 -08 000000052 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 431.0974 ms
17-03-02 12:57:00.932 -08 000000052 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 431.2072 ms
17-03-02 12:57:00.932 -08 000000029 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 431.0502 ms
17-03-02 12:57:00.932 -08 000000029 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 431.2254 ms
17-03-02 12:57:00.932 -08 000000052 INF: ======================================
17-03-02 12:57:00.932 -08 000000029 INF: ======================================
17-03-02 12:57:00.934 -08 000000074 INF: Y Motor: Recv v 0\r
17-03-02 12:57:00.934 -08 000000074 INF: Y Motor: Moved to 62.9704 after 1311 ms
17-03-02 12:57:00.934 -08 000000074 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:00.934 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:00.936 -08 000000050 INF: ======================================
17-03-02 12:57:00.996 -08 000000074 INF: Y Motor: Recv v 4097\r
17-03-02 12:57:00.996 -08 000000074 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:00.996 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:01.058 -08 000000074 INF: Y Motor: Recv v 0\r
17-03-02 12:57:01.058 -08 000000074 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:01.058 -08 000000074 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:01.120 -08 000000074 INF: Y Motor: Recv v 134217728\r
17-03-02 12:57:01.120 -08 000000074 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:57:01.120 -08 000000074 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:01.120 -08 000000074 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:01.182 -08 000000074 INF: Y Motor: Recv v 0\r
17-03-02 12:57:01.182 -08 000000074 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:01.182 -08 000000074 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:01.182 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:01.244 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:57:01.244 -08 000000074 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:01.244 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:01.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:57:01.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left===================
17-03-02 12:57:01.307 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:57:01.307 -08 000000074 INF: ======================================
17-03-02 12:57:01.308 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:01.309 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:01.310 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.310 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:57:01.367 -08 000000108 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:57:01.367 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:01.432 -08 000000029 INF: FPGA: Recv TDIYERD 6297042
17-03-02 12:57:01.432 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:57:01.495 -08 000000030 INF: FPGA: Recv ZADCR 2429
17-03-02 12:57:01.495 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-03-02 12:57:01.495 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:57:01.554 -08 000000116 INF: FPGA: Recv TDIPULSES 3073
17-03-02 12:57:01.554 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-03-02 12:57:01.554 -08 000000042 INF: TDIScan finished after 7025.5422 ms
17-03-02 12:57:01.554 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-03-02 12:57:01.554 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-03-02 12:57:01.554 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:57:01.619 -08 000000083 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:57:01.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.621 -08 000000092 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:57:01.621 -08 000000030 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:57:01.621 -08 000000044 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:57:01.622 -08 000000092 INF: ======================================
17-03-02 12:57:01.622 -08 000000030 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:57:01.622 -08 000000030 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:57:01.622 -08 000000044 INF: ======================================
17-03-02 12:57:01.683 -08 000000030 INF: Y Motor: Recv ok\r
17-03-02 12:57:01.683 -08 000000030 INF: ======================================
17-03-02 12:57:01.684 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:57:01.718 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.718 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:57:01.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:57:01.769 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.769 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:57:01.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:01.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:57:01.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:57:01.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-03-02 12:57:01.802 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:57:01.802 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-03-02 12:57:01.802 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-03-02 12:57:02.252 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:57:02.252 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left===================
17-03-02 12:57:02.491 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-03-02 12:57:02.514 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0872658369033436Best Z position at top surface = -0.159015437653679Best Z position at top surface + compensator offset = -0.136315437653679 C:161,L:3,T
17-03-02 12:57:02.515 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159015437653679
17-03-02 12:57:02.515 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97211
17-03-02 12:57:02.515 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0872658369033436
17-03-02 12:57:02.515 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.62677
17-03-02 12:57:02.515 -08 000000042 INF: Z-height at LaneTopSurface is -0.159015437653679.
17-03-02 12:57:02.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:57:02.651 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:57:02.651 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:57:02.679 -08 000000097 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:02.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-03-02 12:57:02.681 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:02.681 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543
17-03-02 12:57:02.681 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:02.682 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:02.682 -08 000000119 INF: ===================Move Tilt Motor 2===================
17-03-02 12:57:02.683 -08 000000085 INF: ===================Move Tilt Motor 1===================
17-03-02 12:57:02.683 -08 000000128 INF: ===================Move Tilt Motor 3===================
17-03-02 12:57:02.683 -08 000000085 INF: ======================================
17-03-02 12:57:02.683 -08 000000119 INF: ======================================
17-03-02 12:57:02.684 -08 000000128 INF: ======================================
17-03-02 12:57:02.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:02.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:02.686 -08 000000042 INF: ETF Best Z: -0.1363154 mm (35734 DAC)
17-03-02 12:57:02.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:02.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:02.687 -08 000000042 INF: Compensator: Moving IntoPath
17-03-02 12:57:02.687 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-03-02 12:57:03.298 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:57:03.299 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:57:03.299 -08 000000018 INF: WaitCommand(5000) end
17-03-02 12:57:03.299 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:57:03.301 -08 000000078 INF: FPGA: Recv MIOCOMPF
17-03-02 12:57:03.301 -08 000000042 INF: Compensator: Moved IntoPath in 613 ms
17-03-02 12:57:03.301 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:03.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:03.308 -08 000000042 INF: Swath 1 position calculated to be: {X=74.16164, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-03-02 12:57:03.308 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26964, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-03-02 12:57:03.314 -08 000000042 INF: Swath 0: Converted transform from (-46.05642, 50.73601) pixels to (-0.01587, 0.017595) mm.
17-03-02 12:57:03.319 -08 000000042 INF: Swath 1: Converted transform from (-66.20203, 49.35447) pixels to (-0.02277, 0.016905) mm.
17-03-02 12:57:03.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-03-02 12:57:03.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-03-02 12:57:03.320 -08 000000042 INF: Transformed XStagePosition from 74.16164 mm to 74.1457663532346 mm.
17-03-02 12:57:03.332 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5706843560338 mm.
17-03-02 12:57:03.332 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3706843560338 mm.
17-03-02 12:57:03.332 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4614343560338 mm.
17-03-02 12:57:03.334 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:03.334 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-03-02 12:57:03.334 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:03.334 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-03-02 12:57:03.339 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:03.340 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:03.341 -08 000000062 INF: ===================MoveEmissionFilters===================
17-03-02 12:57:03.341 -08 000000028 INF: ===================Move X,Y===================
17-03-02 12:57:03.341 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:03.341 -08 000000091 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:03.342 -08 000000028 INF: ===================Move X,Y, Parallel===================
17-03-02 12:57:03.342 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-03-02 12:57:03.342 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:03.342 -08 000000092 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:03.342 -08 000000053 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:57:03.342 -08 000000053 INF: Z Motor: Moving to -0.1563 mm, started at -0.0100 mm
17-03-02 12:57:03.342 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:03.342 -08 000000053 INF: FPGA: Xmit ZTRG 0\n
17-03-02 12:57:03.342 -08 000000091 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:03.342 -08 000000029 INF: ===================Move X Motor without settling===================
17-03-02 12:57:03.342 -08 000000074 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:03.342 -08 000000092 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:03.343 -08 000000029 INF: X Motor: Xmit PR VM\n
17-03-02 12:57:03.343 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:03.343 -08 000000074 INF: Y Motor: Moving to 64.5707 mm @25.000 mm/sec, started at 62.9704 mm
17-03-02 12:57:03.343 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:03.343 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:03.343 -08 000000098 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:57:03.343 -08 000000088 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:57:03.343 -08 000000115 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:57:03.343 -08 000000098 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:57:03.344 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:03.344 -08 000000097 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:57:03.344 -08 000000098 INF: ======================================
17-03-02 12:57:03.344 -08 000000061 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:57:03.344 -08 000000088 INF: ======================================
17-03-02 12:57:03.344 -08 000000097 INF: ======================================
17-03-02 12:57:03.344 -08 000000061 INF: ======================================
17-03-02 12:57:03.345 -08 000000116 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:57:03.345 -08 000000036 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:57:03.345 -08 000000115 INF: ======================================
17-03-02 12:57:03.345 -08 000000116 INF: ======================================
17-03-02 12:57:03.345 -08 000000036 INF: ======================================
17-03-02 12:57:03.346 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:03.346 -08 000000092 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:03.346 -08 000000136 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:57:03.346 -08 000000136 INF: ======================================
17-03-02 12:57:03.346 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:03.347 -08 000000106 INF: ======================================
17-03-02 12:57:03.347 -08 000000092 INF: ======================================
17-03-02 12:57:03.348 -08 000000091 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:03.348 -08 000000034 INF: ======================================
17-03-02 12:57:03.349 -08 000000091 INF: ======================================
17-03-02 12:57:03.350 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:57:03.350 -08 000000062 INF: ======================================
17-03-02 12:57:03.413 -08 000000085 INF: FPGA: Recv ZTRG 
17-03-02 12:57:03.413 -08 000000053 INF: FPGA: Xmit ZYT 0 3\n
17-03-02 12:57:03.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-03-02 12:57:03.414 -08 000000018 INF: Current Position of Pump is: 15360
17-03-02 12:57:03.415 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:57:03.415 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:03.415 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:03.415 -08 000000029 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:57:03.415 -08 000000029 INF: X Motor: Xmit PR VI\n
17-03-02 12:57:03.475 -08 000000087 INF: FPGA: Recv ZYT 
17-03-02 12:57:03.476 -08 000000053 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-03-02 12:57:03.476 -08 000000053 INF: FPGA: Xmit ZMV 40977\n
17-03-02 12:57:03.477 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:57:03.477 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:03.477 -08 000000029 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:57:03.477 -08 000000029 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:57:03.477 -08 000000029 INF: X Motor: Moving to 74.1458 mm @15.000 mm/sec, started at 74.7153 mm
17-03-02 12:57:03.477 -08 000000029 INF: X Motor: Xmit MA 6204\n
17-03-02 12:57:03.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:57:03.538 -08 000000088 INF: FPGA: Recv @LOG Trigger Camera
17-03-02 12:57:03.538 -08 000000006 INF: FPGA: Trigger Camera
17-03-02 12:57:03.540 -08 000000074 INF: Y Motor: Recv v 0\r
17-03-02 12:57:03.540 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:03.540 -08 000000029 INF: X Motor: Recv MA 6204\r\n>
17-03-02 12:57:03.540 -08 000000029 INF: X Motor: WaitUntilStopped 60038
17-03-02 12:57:03.540 -08 000000074 INF: Y Motor: Set target position to 5957068 encoder counts
17-03-02 12:57:03.540 -08 000000074 INF: Y Motor: Xmit s r0xca 5957068\r
17-03-02 12:57:03.601 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-03-02 12:57:03.601 -08 000000018 INF: Current Position of Pump is: 15360
17-03-02 12:57:03.601 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC===================
17-03-02 12:57:03.602 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:57:03.602 -08 000000074 INF: Y Motor: Start the move command
17-03-02 12:57:03.602 -08 000000074 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:03.662 -08 000000083 INF: FPGA: Recv ZMV 
17-03-02 12:57:03.662 -08 000000053 INF: Z Motor: MoveAndTrigger 'ZMV' command took 186.2023 ms
17-03-02 12:57:03.662 -08 000000053 INF: FPGA: Xmit ZDACR\n
17-03-02 12:57:03.664 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:57:03.664 -08 000000074 INF: Y Motor: WaitUntilStopped 60064
17-03-02 12:57:03.664 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:03.701 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD15360R\r
17-03-02 12:57:03.724 -08 000000128 INF: FPGA: Recv ZDACR 40977
17-03-02 12:57:03.724 -08 000000053 INF: Z Motor: MoveAndTrigger took 382.2491 ms w/comms
17-03-02 12:57:03.724 -08 000000053 INF: Z Motor: After move to -0.1563, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:57:03.724 -08 000000053 INF: Z Motor: MoveAbsStepped took 382.3879 ms
17-03-02 12:57:03.725 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:03.726 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-03-02 12:57:03.727 -08 000000138 INF: ===================TDI Scan Setup===================
17-03-02 12:57:03.727 -08 000000044 INF: ===================Camera Arm TDI===================
17-03-02 12:57:03.727 -08 000000138 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:03.728 -08 000000044 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:03.728 -08 000000138 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:57:03.728 -08 000000044 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:03.729 -08 000000138 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:03.729 -08 000000138 INF: FPGA: Xmit ZSEL 3\n
17-03-02 12:57:03.786 -08 000000115 INF: FPGA: Recv ZSEL 
17-03-02 12:57:03.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:03.787 -08 000000138 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:03.787 -08 000000138 INF: FPGA: Xmit TDIBB 1\n
17-03-02 12:57:03.788 -08 000000074 INF: Y Motor: Unshifted Position: 5878960
17-03-02 12:57:03.838 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:03.848 -08 000000091 INF: FPGA: Recv TDIBB
17-03-02 12:57:03.848 -08 000000138 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:03.849 -08 000000138 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:57:03.850 -08 000000138 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:03.851 -08 000000138 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-03-02 12:57:03.852 -08 000000138 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-03-02 12:57:03.852 -08 000000138 INF: FPGA: Xmit ZSTEP 1792263\n
17-03-02 12:57:03.887 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:03.910 -08 000000083 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:03.910 -08 000000138 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:03.912 -08 000000138 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:57:03.912 -08 000000138 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:03.914 -08 000000138 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:57:03.914 -08 000000138 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:57:03.914 -08 000000138 INF: Z Motor: Arming to move to -0.1163 mm
17-03-02 12:57:03.914 -08 000000138 INF: FPGA: Xmit ZYT 6437068 4\n
17-03-02 12:57:03.962 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:03.972 -08 000000095 INF: FPGA: Recv ZYT 
17-03-02 12:57:03.972 -08 000000138 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378960 enc / 63.790 mm / ) = 6437068 enc / 64.371 mm
17-03-02 12:57:03.972 -08 000000138 INF: FPGA: Xmit ZARM 30491\n
17-03-02 12:57:03.973 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:03.974 -08 000000029 INF: X Motor: Xmit PR ER\n
17-03-02 12:57:04.037 -08 000000061 INF: FPGA: Recv ZARM
17-03-02 12:57:04.037 -08 000000138 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.9613 ms
17-03-02 12:57:04.037 -08 000000138 INF: Z Motor: ArmAbsStepped took 122.8583 ms
17-03-02 12:57:04.037 -08 000000138 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:04.039 -08 000000029 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:57:04.039 -08 000000029 INF: X Motor: Moved to 74.1465 after 499 ms
17-03-02 12:57:04.039 -08 000000138 INF: ===================TDI Scan Setup===================
17-03-02 12:57:04.039 -08 000000029 INF: ======================================
17-03-02 12:57:04.040 -08 000000138 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:57:04.041 -08 000000138 INF: ===================TDI Scan Setup===================
17-03-02 12:57:04.042 -08 000000138 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:57:04.043 -08 000000138 INF: ===================TDI Scan Setup===================
17-03-02 12:57:04.044 -08 000000138 INF: ======================================
17-03-02 12:57:04.101 -08 000000074 INF: Y Motor: Unshifted Position: 5957070
17-03-02 12:57:04.101 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:04.101 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:04.163 -08 000000074 INF: Y Motor: Recv v 0\r
17-03-02 12:57:04.163 -08 000000074 INF: Y Motor: Moved to 64.5707 after 499 ms
17-03-02 12:57:04.163 -08 000000074 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:04.223 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:04.225 -08 000000074 INF: Y Motor: Recv v 4096\r
17-03-02 12:57:04.225 -08 000000074 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:04.225 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:04.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:04.287 -08 000000074 INF: Y Motor: Recv v 0\r
17-03-02 12:57:04.287 -08 000000074 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:04.287 -08 000000074 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:04.349 -08 000000074 INF: Y Motor: Recv v 402653184\r
17-03-02 12:57:04.349 -08 000000074 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:57:04.349 -08 000000074 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:04.349 -08 000000074 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:04.411 -08 000000074 INF: Y Motor: Recv v 0\r
17-03-02 12:57:04.411 -08 000000074 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:04.411 -08 000000074 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:04.411 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:04.476 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:57:04.476 -08 000000074 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:04.476 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:04.536 -08 000000074 INF: Y Motor: Recv ok\r
17-03-02 12:57:04.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:04.536 -08 000000074 INF: ======================================
17-03-02 12:57:04.537 -08 000000028 INF: ===================Move X,Y===================
17-03-02 12:57:04.538 -08 000000028 INF: ======================================
17-03-02 12:57:04.597 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:04.685 -08 000000044 INF: Camera #0 AttachBuffer (imageDataPtr = 56928899120 imgPtr = 56928899120 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:57:04.685 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:57:04.685 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:04.700 -08 000000044 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:04.702 -08 000000044 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:04.847 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:04.910 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:05.160 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:05.225 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:05.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:05.533 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:05.702 -08 000000044 INF: Camera #2 AttachBuffer (imageDataPtr = 64223121456 imgPtr = 65129091120 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:57:05.702 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:57:05.703 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:05.718 -08 000000044 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:05.720 -08 000000044 INF: ===================Camera Arm TDI===================
17-03-02 12:57:05.721 -08 000000044 INF: ======================================
17-03-02 12:57:05.722 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:05.723 -08 000000053 INF: ======================================
17-03-02 12:57:05.724 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:05.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:05.725 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-03-02 12:57:05.725 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-03-02 12:57:05.783 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:05.787 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:57:05.787 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-03-02 12:57:05.845 -08 000000133 INF: FPGA: Recv ZFREQCL
17-03-02 12:57:05.845 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:57:05.845 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:05.845 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:05.846 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:05.907 -08 000000073 INF: FPGA: Recv TDIYERD 6457069
17-03-02 12:57:05.907 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457069 counts (64.571 mm)
17-03-02 12:57:05.907 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:05.908 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:05.908 -08 000000062 INF: ===================TDI FPGA Arm===================
17-03-02 12:57:05.908 -08 000000116 INF: ===================Set YMotor gains for scans===================
17-03-02 12:57:05.909 -08 000000116 INF: ======================================
17-03-02 12:57:05.909 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:05.910 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:57:05.910 -08 000000062 INF: FPGA: Xmit TDIYPOS 6346143\n
17-03-02 12:57:05.969 -08 000000072 INF: FPGA: Recv TDIYPOS
17-03-02 12:57:05.969 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:05.970 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:57:05.971 -08 000000062 INF: FPGA: Xmit TDIYARM3 139264 6437068 1 1\n
17-03-02 12:57:06.031 -08 000000054 INF: FPGA: Recv TDIYARM3
17-03-02 12:57:06.031 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:06.032 -08 000000062 INF: ===================TDI FPGA Arm===================
17-03-02 12:57:06.033 -08 000000062 INF: ======================================
17-03-02 12:57:06.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:06.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:06.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:06.036 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:06.036 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:06.037 -08 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:57:06.037 -08 000000123 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:57:06.037 -08 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:57:06.037 -08 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:57:06.037 -08 000000085 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:57:06.037 -08 000000085 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:57:06.037 -08 000000123 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:57:06.037 -08 000000123 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:57:06.037 -08 000000123 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:57:06.038 -08 000000123 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:57:06.096 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:06.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:06.157 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-03-02 12:57:06.157 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-02 12:57:06.407 -08 000000054 INF: FPGA: Recv EX2MV
17-03-02 12:57:06.407 -08 000000085 INF: Excitation Filter 2: Moved -107 steps in 369.6382 ms
17-03-02 12:57:06.407 -08 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.7362 ms
17-03-02 12:57:06.407 -08 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.8112 ms
17-03-02 12:57:06.407 -08 000000085 INF: ======================================
17-03-02 12:57:06.469 -08 000000122 INF: FPGA: Recv EX1MV
17-03-02 12:57:06.469 -08 000000123 INF: Excitation Filter 1: Moved -107 steps in 431.457 ms
17-03-02 12:57:06.469 -08 000000123 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 431.5836 ms
17-03-02 12:57:06.469 -08 000000123 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.6976 ms
17-03-02 12:57:06.469 -08 000000123 INF: ======================================
17-03-02 12:57:06.470 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:06.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:06.472 -08 000000091 INF: ===================Camera TDI===================
17-03-02 12:57:06.472 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:06.472 -08 000000065 INF: ===================FPGA Z Wait===================
17-03-02 12:57:06.472 -08 000000036 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:06.472 -08 000000065 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:57:06.473 -08 000000036 INF: Y Motor: Moving to 14.9223 mm @6.500 mm/sec, started at 64.5707 mm
17-03-02 12:57:06.473 -08 000000036 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:06.473 -08 000000036 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:06.473 -08 000000091 INF: ===================Camera TDI, Parallel===================
17-03-02 12:57:06.473 -08 000000098 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:57:06.474 -08 000000102 INF: ===================Camera TDI===================
17-03-02 12:57:06.474 -08 000000133 INF: ===================Camera TDI===================
17-03-02 12:57:06.474 -08 000000098 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:57:06.475 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:06.475 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:06.476 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:06.476 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:06.535 -08 000000036 INF: Y Motor: Recv ok\r
17-03-02 12:57:06.535 -08 000000036 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:06.535 -08 000000036 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:06.599 -08 000000036 INF: Y Motor: Recv ok\r
17-03-02 12:57:06.599 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:06.625 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:06.625 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:06.626 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:06.626 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:06.659 -08 000000036 INF: Y Motor: Recv v 0\r
17-03-02 12:57:06.659 -08 000000036 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:06.659 -08 000000036 INF: Y Motor: Set target position to 992235 encoder counts
17-03-02 12:57:06.659 -08 000000036 INF: Y Motor: Xmit s r0xca 992235\r
17-03-02 12:57:06.721 -08 000000036 INF: Y Motor: Recv ok\r
17-03-02 12:57:06.721 -08 000000036 INF: Y Motor: Start the move command
17-03-02 12:57:06.721 -08 000000036 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:06.775 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:06.775 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:06.776 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:06.776 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:06.783 -08 000000036 INF: Y Motor: Recv ok\r
17-03-02 12:57:06.783 -08 000000036 INF: Y Motor: WaitUntilStopped 67638
17-03-02 12:57:06.783 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:06.843 -08 000000078 INF: FPGA: Recv ZWAIT 
17-03-02 12:57:06.843 -08 000000065 INF: ======================================
17-03-02 12:57:06.907 -08 000000036 INF: Y Motor: Unshifted Position: 5895215
17-03-02 12:57:06.925 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:57:06.925 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:57:06.925 -08 000000102 INF: ===================Camera #0 Frame #4===================
17-03-02 12:57:06.926 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:06.926 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:06.926 -08 000000133 INF: ===================Camera #2 Frame #5===================
17-03-02 12:57:06.957 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:07.085 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:07.087 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-03-02 12:57:07.087 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-03-02 12:57:07.087 -08 000000102 INF: ===================Camera #0 Frame #10===================
17-03-02 12:57:07.092 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:57:07.092 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:57:07.092 -08 000000133 INF: ===================Camera #2 Frame #11===================
17-03-02 12:57:07.221 -08 000000036 INF: Y Motor: Unshifted Position: 5689602
17-03-02 12:57:07.255 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:57:07.255 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:57:07.255 -08 000000102 INF: ===================Camera #0 Frame #17===================
17-03-02 12:57:07.257 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-03-02 12:57:07.261 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:57:07.261 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:57:07.261 -08 000000133 INF: ===================Camera #2 Frame #17===================
17-03-02 12:57:07.271 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:07.344 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:07.395 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:07.426 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:57:07.426 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:57:07.426 -08 000000102 INF: ===================Camera #0 Frame #23===================
17-03-02 12:57:07.430 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:57:07.430 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:57:07.430 -08 000000133 INF: ===================Camera #2 Frame #23===================
17-03-02 12:57:07.444 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:07.530 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:07.531 -08 000000036 INF: Y Motor: Unshifted Position: 5489618
17-03-02 12:57:07.581 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:07.594 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:57:07.594 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:57:07.594 -08 000000102 INF: ===================Camera #0 Frame #29===================
17-03-02 12:57:07.599 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:57:07.599 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:57:07.599 -08 000000133 INF: ===================Camera #2 Frame #29===================
17-03-02 12:57:07.709 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:07.762 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-03-02 12:57:07.762 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-03-02 12:57:07.762 -08 000000102 INF: ===================Camera #0 Frame #35===================
17-03-02 12:57:07.768 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:57:07.768 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:57:07.768 -08 000000133 INF: ===================Camera #2 Frame #36===================
17-03-02 12:57:07.780 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:07.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:07.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:07.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-03-02 12:57:07.845 -08 000000036 INF: Y Motor: Unshifted Position: 5285300
17-03-02 12:57:07.895 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:07.930 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-03-02 12:57:07.930 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-03-02 12:57:07.930 -08 000000102 INF: ===================Camera #0 Frame #41===================
17-03-02 12:57:07.941 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:57:07.941 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:57:07.941 -08 000000133 INF: ===================Camera #2 Frame #42===================
17-03-02 12:57:08.021 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:08.099 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:57:08.099 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:57:08.099 -08 000000102 INF: ===================Camera #0 Frame #48===================
17-03-02 12:57:08.111 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:57:08.111 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:57:08.111 -08 000000133 INF: ===================Camera #2 Frame #48===================
17-03-02 12:57:08.155 -08 000000036 INF: Y Motor: Unshifted Position: 5083581
17-03-02 12:57:08.205 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:08.214 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:08.214 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:08.215 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:08.215 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:08.270 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:57:08.270 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:57:08.270 -08 000000102 INF: ===================Camera #0 Frame #54===================
17-03-02 12:57:08.281 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:57:08.281 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:57:08.281 -08 000000133 INF: ===================Camera #2 Frame #54===================
17-03-02 12:57:08.282 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:08.282 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (6)===================
17-03-02 12:57:08.282 -08 000000018 INF: Valve A1: Go to position 6
17-03-02 12:57:08.282 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:57:08.333 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:08.344 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-03-02 12:57:08.344 -08 000000018 INF: Valve A1: 22.745 seconds since last move, > 10.000 seconds required between moves
17-03-02 12:57:08.344 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 4 to 6
17-03-02 12:57:08.344 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW6\r
17-03-02 12:57:08.344 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-03-02 12:57:08.344 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:57:08.439 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-03-02 12:57:08.439 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-03-02 12:57:08.439 -08 000000102 INF: ===================Camera #0 Frame #60===================
17-03-02 12:57:08.451 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:57:08.451 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:57:08.451 -08 000000133 INF: ===================Camera #2 Frame #61===================
17-03-02 12:57:08.469 -08 000000036 INF: Y Motor: Unshifted Position: 4879489
17-03-02 12:57:08.519 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:08.608 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-03-02 12:57:08.608 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-03-02 12:57:08.608 -08 000000102 INF: ===================Camera #0 Frame #66===================
17-03-02 12:57:08.624 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-03-02 12:57:08.624 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-03-02 12:57:08.624 -08 000000133 INF: ===================Camera #2 Frame #67===================
17-03-02 12:57:08.644 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:08.718 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 6\r
17-03-02 12:57:08.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:08.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-03-02 12:57:08.777 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:57:08.777 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:57:08.777 -08 000000102 INF: ===================Camera #0 Frame #73===================
17-03-02 12:57:08.781 -08 000000036 INF: Y Motor: Unshifted Position: 4676466
17-03-02 12:57:08.794 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:57:08.794 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:57:08.794 -08 000000133 INF: ===================Camera #2 Frame #73===================
17-03-02 12:57:08.831 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:08.949 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-03-02 12:57:08.949 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-03-02 12:57:08.949 -08 000000102 INF: ===================Camera #0 Frame #79===================
17-03-02 12:57:08.955 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:08.964 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-03-02 12:57:08.964 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-03-02 12:57:08.964 -08 000000133 INF: ===================Camera #2 Frame #80===================
17-03-02 12:57:09.091 -08 000000036 INF: Y Motor: Unshifted Position: 4474959
17-03-02 12:57:09.118 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-03-02 12:57:09.118 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-03-02 12:57:09.118 -08 000000102 INF: ===================Camera #0 Frame #85===================
17-03-02 12:57:09.138 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-03-02 12:57:09.138 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-03-02 12:57:09.138 -08 000000133 INF: ===================Camera #2 Frame #86===================
17-03-02 12:57:09.141 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:09.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:09.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:09.211 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:09.270 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:09.277 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:09.285 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 6, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-03-02 12:57:09.287 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-03-02 12:57:09.287 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-03-02 12:57:09.287 -08 000000102 INF: ===================Camera #0 Frame #91===================
17-03-02 12:57:09.309 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:57:09.309 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:57:09.309 -08 000000133 INF: ===================Camera #2 Frame #92===================
17-03-02 12:57:09.377 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:57:09.405 -08 000000036 INF: Y Motor: Unshifted Position: 4270640
17-03-02 12:57:09.455 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:09.457 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:57:09.457 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:57:09.457 -08 000000102 INF: ===================Camera #0 Frame #98===================
17-03-02 12:57:09.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-03-02 12:57:09.466 -08 000000018 INF: Current Position of Pump is: 0
17-03-02 12:57:09.480 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-03-02 12:57:09.480 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-03-02 12:57:09.480 -08 000000133 INF: ===================Camera #2 Frame #99===================
17-03-02 12:57:09.566 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-03-02 12:57:09.579 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:09.630 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-03-02 12:57:09.630 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-03-02 12:57:09.630 -08 000000102 INF: ===================Camera #0 Frame #104===================
17-03-02 12:57:09.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:09.654 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-03-02 12:57:09.654 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-03-02 12:57:09.654 -08 000000133 INF: ===================Camera #2 Frame #105===================
17-03-02 12:57:09.717 -08 000000036 INF: Y Motor: Unshifted Position: 4069783
17-03-02 12:57:09.751 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:09.767 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:09.778 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:09.800 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-03-02 12:57:09.800 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-03-02 12:57:09.800 -08 000000102 INF: ===================Camera #0 Frame #110===================
17-03-02 12:57:09.823 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-03-02 12:57:09.823 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-03-02 12:57:09.823 -08 000000133 INF: ===================Camera #2 Frame #111===================
17-03-02 12:57:09.891 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:09.970 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:57:09.970 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:57:09.970 -08 000000102 INF: ===================Camera #0 Frame #117===================
17-03-02 12:57:09.994 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:57:09.994 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:57:09.994 -08 000000133 INF: ===================Camera #2 Frame #117===================
17-03-02 12:57:10.027 -08 000000036 INF: Y Motor: Unshifted Position: 3866121
17-03-02 12:57:10.028 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:10.077 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:10.088 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:10.143 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-03-02 12:57:10.143 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-03-02 12:57:10.143 -08 000000102 INF: ===================Camera #0 Frame #123===================
17-03-02 12:57:10.165 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-03-02 12:57:10.165 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-03-02 12:57:10.165 -08 000000133 INF: ===================Camera #2 Frame #124===================
17-03-02 12:57:10.188 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-03-02 12:57:10.205 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:10.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:10.313 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-03-02 12:57:10.313 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-03-02 12:57:10.313 -08 000000102 INF: ===================Camera #0 Frame #129===================
17-03-02 12:57:10.339 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-03-02 12:57:10.339 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-03-02 12:57:10.339 -08 000000133 INF: ===================Camera #2 Frame #130===================
17-03-02 12:57:10.341 -08 000000036 INF: Y Motor: Unshifted Position: 3663967
17-03-02 12:57:10.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:10.391 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:10.402 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:10.402 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Aspirating port PortB===================
17-03-02 12:57:10.483 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-03-02 12:57:10.483 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-03-02 12:57:10.483 -08 000000102 INF: ===================Camera #0 Frame #135===================
17-03-02 12:57:10.502 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP7680R\r
17-03-02 12:57:10.510 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-03-02 12:57:10.510 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-03-02 12:57:10.510 -08 000000133 INF: ===================Camera #2 Frame #136===================
17-03-02 12:57:10.516 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:10.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:10.652 -08 000000036 INF: Y Motor: Unshifted Position: 3460953
17-03-02 12:57:10.653 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-03-02 12:57:10.653 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-03-02 12:57:10.653 -08 000000102 INF: ===================Camera #0 Frame #142===================
17-03-02 12:57:10.681 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-03-02 12:57:10.681 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-03-02 12:57:10.681 -08 000000133 INF: ===================Camera #2 Frame #143===================
17-03-02 12:57:10.687 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:10.702 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:10.778 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:10.826 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-03-02 12:57:10.826 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-03-02 12:57:10.826 -08 000000102 INF: ===================Camera #0 Frame #148===================
17-03-02 12:57:10.829 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:10.855 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-03-02 12:57:10.855 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-03-02 12:57:10.855 -08 000000133 INF: ===================Camera #2 Frame #149===================
17-03-02 12:57:10.964 -08 000000036 INF: Y Motor: Unshifted Position: 3258162
17-03-02 12:57:10.995 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-03-02 12:57:10.995 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-03-02 12:57:10.995 -08 000000102 INF: ===================Camera #0 Frame #154===================
17-03-02 12:57:11.014 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:11.026 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-03-02 12:57:11.026 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-03-02 12:57:11.026 -08 000000133 INF: ===================Camera #2 Frame #155===================
17-03-02 12:57:11.028 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:11.088 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:11.139 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:11.164 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-03-02 12:57:11.164 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-03-02 12:57:11.164 -08 000000102 INF: ===================Camera #0 Frame #161===================
17-03-02 12:57:11.197 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-03-02 12:57:11.197 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-03-02 12:57:11.197 -08 000000133 INF: ===================Camera #2 Frame #162===================
17-03-02 12:57:11.278 -08 000000036 INF: Y Motor: Unshifted Position: 3055138
17-03-02 12:57:11.328 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:11.338 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-03-02 12:57:11.338 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-03-02 12:57:11.338 -08 000000102 INF: ===================Camera #0 Frame #167===================
17-03-02 12:57:11.339 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:11.358 -08 000000129 INF: RunCopyService queue size at 3/2/2017 12:57:11 PM is 0
17-03-02 12:57:11.372 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-03-02 12:57:11.372 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-03-02 12:57:11.372 -08 000000133 INF: ===================Camera #2 Frame #168===================
17-03-02 12:57:11.402 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:11.453 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:11.506 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-03-02 12:57:11.506 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-03-02 12:57:11.506 -08 000000102 INF: ===================Camera #0 Frame #173===================
17-03-02 12:57:11.543 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-03-02 12:57:11.543 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-03-02 12:57:11.543 -08 000000133 INF: ===================Camera #2 Frame #174===================
17-03-02 12:57:11.588 -08 000000036 INF: Y Motor: Unshifted Position: 2851479
17-03-02 12:57:11.638 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:11.652 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:11.676 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-03-02 12:57:11.676 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-03-02 12:57:11.676 -08 000000102 INF: ===================Camera #0 Frame #179===================
17-03-02 12:57:11.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:11.714 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-03-02 12:57:11.714 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-03-02 12:57:11.714 -08 000000133 INF: ===================Camera #2 Frame #181===================
17-03-02 12:57:11.764 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:11.846 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-03-02 12:57:11.846 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-03-02 12:57:11.846 -08 000000102 INF: ===================Camera #0 Frame #186===================
17-03-02 12:57:11.889 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-03-02 12:57:11.889 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-03-02 12:57:11.889 -08 000000133 INF: ===================Camera #2 Frame #187===================
17-03-02 12:57:11.900 -08 000000036 INF: Y Motor: Unshifted Position: 2648684
17-03-02 12:57:11.950 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:11.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:12.019 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-03-02 12:57:12.019 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-03-02 12:57:12.019 -08 000000102 INF: ===================Camera #0 Frame #192===================
17-03-02 12:57:12.027 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:12.060 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-03-02 12:57:12.060 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-03-02 12:57:12.060 -08 000000133 INF: ===================Camera #2 Frame #194===================
17-03-02 12:57:12.078 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:12.189 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-03-02 12:57:12.189 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-03-02 12:57:12.189 -08 000000102 INF: ===================Camera #0 Frame #198===================
17-03-02 12:57:12.213 -08 000000036 INF: Y Motor: Unshifted Position: 2445233
17-03-02 12:57:12.235 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-03-02 12:57:12.235 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-03-02 12:57:12.235 -08 000000133 INF: ===================Camera #2 Frame #200===================
17-03-02 12:57:12.263 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:12.277 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:12.339 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:12.359 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-03-02 12:57:12.359 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-03-02 12:57:12.359 -08 000000102 INF: ===================Camera #0 Frame #205===================
17-03-02 12:57:12.390 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:12.405 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-03-02 12:57:12.405 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-03-02 12:57:12.405 -08 000000133 INF: ===================Camera #2 Frame #206===================
17-03-02 12:57:12.526 -08 000000036 INF: Y Motor: Unshifted Position: 2243512
17-03-02 12:57:12.532 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-03-02 12:57:12.532 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-03-02 12:57:12.532 -08 000000102 INF: ===================Camera #0 Frame #211===================
17-03-02 12:57:12.576 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:12.577 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-03-02 12:57:12.577 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-03-02 12:57:12.577 -08 000000133 INF: ===================Camera #2 Frame #213===================
17-03-02 12:57:12.589 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:12.648 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:12.699 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:12.702 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-03-02 12:57:12.702 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-03-02 12:57:12.702 -08 000000102 INF: ===================Camera #0 Frame #217===================
17-03-02 12:57:12.806 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-03-02 12:57:12.806 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-03-02 12:57:12.807 -08 000000133 INF: ===================Camera #2 Frame #221===================
17-03-02 12:57:12.867 -08 000000036 INF: Y Motor: Unshifted Position: 2017321
17-03-02 12:57:12.872 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-03-02 12:57:12.872 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-03-02 12:57:12.872 -08 000000102 INF: ===================Camera #0 Frame #223===================
17-03-02 12:57:12.898 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:12.917 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:12.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:12.986 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-03-02 12:57:12.986 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-03-02 12:57:12.986 -08 000000133 INF: ===================Camera #2 Frame #228===================
17-03-02 12:57:13.041 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-03-02 12:57:13.041 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-03-02 12:57:13.041 -08 000000102 INF: ===================Camera #0 Frame #230===================
17-03-02 12:57:13.044 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:13.161 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-03-02 12:57:13.161 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-03-02 12:57:13.161 -08 000000133 INF: ===================Camera #2 Frame #234===================
17-03-02 12:57:13.178 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:13.179 -08 000000036 INF: Y Motor: Unshifted Position: 1816249
17-03-02 12:57:13.214 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-03-02 12:57:13.214 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-03-02 12:57:13.214 -08 000000102 INF: ===================Camera #0 Frame #236===================
17-03-02 12:57:13.229 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:13.240 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:13.333 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-03-02 12:57:13.333 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-03-02 12:57:13.333 -08 000000133 INF: ===================Camera #2 Frame #240===================
17-03-02 12:57:13.356 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:13.384 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-03-02 12:57:13.384 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-03-02 12:57:13.384 -08 000000102 INF: ===================Camera #0 Frame #242===================
17-03-02 12:57:13.490 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:13.493 -08 000000036 INF: Y Motor: Unshifted Position: 1614751
17-03-02 12:57:13.504 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-03-02 12:57:13.504 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-03-02 12:57:13.504 -08 000000133 INF: ===================Camera #2 Frame #247===================
17-03-02 12:57:13.543 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:13.553 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-03-02 12:57:13.553 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-03-02 12:57:13.553 -08 000000102 INF: ===================Camera #0 Frame #248===================
17-03-02 12:57:13.554 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:13.666 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:13.678 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-03-02 12:57:13.678 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-03-02 12:57:13.678 -08 000000133 INF: ===================Camera #2 Frame #253===================
17-03-02 12:57:13.722 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-03-02 12:57:13.722 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-03-02 12:57:13.722 -08 000000102 INF: ===================Camera #0 Frame #255===================
17-03-02 12:57:13.804 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:13.804 -08 000000036 INF: Y Motor: Unshifted Position: 1411732
17-03-02 12:57:13.849 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-03-02 12:57:13.849 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-03-02 12:57:13.849 -08 000000133 INF: ===================Camera #2 Frame #259===================
17-03-02 12:57:13.854 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:13.865 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:13.895 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-03-02 12:57:13.895 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-03-02 12:57:13.895 -08 000000102 INF: ===================Camera #0 Frame #261===================
17-03-02 12:57:13.980 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:14.020 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-03-02 12:57:14.020 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-03-02 12:57:14.020 -08 000000133 INF: ===================Camera #2 Frame #266===================
17-03-02 12:57:14.065 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-03-02 12:57:14.065 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-03-02 12:57:14.065 -08 000000102 INF: ===================Camera #0 Frame #267===================
17-03-02 12:57:14.115 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:14.115 -08 000000036 INF: Y Motor: Unshifted Position: 1208278
17-03-02 12:57:14.165 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:14.176 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:14.194 -08 000000133 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:57:14.194 -08 000000133 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:57:14.194 -08 000000133 INF: ===================Camera #2 Frame #272===================
17-03-02 12:57:14.215 -08 000000133 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:57:14.216 -08 000000133 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:14.239 -08 000000029 INF: FPGA: Recv TDIYWAIT
17-03-02 12:57:14.239 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:14.241 -08 000000098 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:57:14.242 -08 000000100 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:57:14.242 -08 000000123 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:57:14.242 -08 000000100 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:57:14.242 -08 000000100 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:57:14.242 -08 000000100 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:57:14.242 -08 000000100 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:57:14.242 -08 000000123 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:57:14.242 -08 000000123 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:57:14.242 -08 000000123 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:57:14.243 -08 000000123 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:57:14.291 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:14.414 -08 000000133 INF: Camera #2 ReleaseBuffer
17-03-02 12:57:14.414 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:57:14.414 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:57:14.414 -08 000000102 INF: ===================Camera #0 Frame #272===================
17-03-02 12:57:14.414 -08 000000133 INF: ===================Camera TDI===================
17-03-02 12:57:14.426 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:14.429 -08 000000036 INF: Y Motor: Unshifted Position: 1005565
17-03-02 12:57:14.430 -08 000000102 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:57:14.431 -08 000000102 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:14.448 -08 000000133 INF: ======================================
17-03-02 12:57:14.479 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:14.490 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:14.596 -08 000000102 INF: Camera #0 ReleaseBuffer
17-03-02 12:57:14.596 -08 000000102 INF: ===================Camera TDI===================
17-03-02 12:57:14.613 -08 000000078 INF: FPGA: Recv EX1MV
17-03-02 12:57:14.613 -08 000000078 INF: FPGA: Recv EX2MV
17-03-02 12:57:14.613 -08 000000123 INF: Excitation Filter 2: Moved 107 steps in 371.0129 ms
17-03-02 12:57:14.613 -08 000000123 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.1132 ms
17-03-02 12:57:14.613 -08 000000123 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.2208 ms
17-03-02 12:57:14.613 -08 000000100 INF: Excitation Filter 1: Moved 107 steps in 371.2452 ms
17-03-02 12:57:14.613 -08 000000100 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.4519 ms
17-03-02 12:57:14.613 -08 000000100 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.5595 ms
17-03-02 12:57:14.613 -08 000000123 INF: ======================================
17-03-02 12:57:14.614 -08 000000100 INF: ======================================
17-03-02 12:57:14.615 -08 000000036 INF: Y Motor: Unshifted Position: 992234
17-03-02 12:57:14.615 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:14.615 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:14.615 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:14.616 -08 000000098 INF: ======================================
17-03-02 12:57:14.626 -08 000000102 INF: ======================================
17-03-02 12:57:14.627 -08 000000091 INF: ===================Camera TDI===================
17-03-02 12:57:14.629 -08 000000091 INF: ======================================
17-03-02 12:57:14.676 -08 000000036 INF: Y Motor: Recv v 0\r
17-03-02 12:57:14.676 -08 000000036 INF: Y Motor: Moved to 14.9223 after 7892 ms
17-03-02 12:57:14.676 -08 000000036 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:14.740 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:14.741 -08 000000036 INF: Y Motor: Recv v 4097\r
17-03-02 12:57:14.741 -08 000000036 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:14.741 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:14.801 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:14.802 -08 000000036 INF: Y Motor: Recv v 0\r
17-03-02 12:57:14.802 -08 000000036 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:14.802 -08 000000036 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:14.864 -08 000000036 INF: Y Motor: Recv v 134217728\r
17-03-02 12:57:14.864 -08 000000036 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:57:14.864 -08 000000036 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:14.864 -08 000000036 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:14.928 -08 000000036 INF: Y Motor: Recv v 0\r
17-03-02 12:57:14.928 -08 000000036 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:14.928 -08 000000036 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:14.928 -08 000000036 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:14.990 -08 000000036 INF: Y Motor: Recv ok\r
17-03-02 12:57:14.990 -08 000000036 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:14.990 -08 000000036 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:15.051 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:15.052 -08 000000036 INF: Y Motor: Recv ok\r
17-03-02 12:57:15.052 -08 000000036 INF: ======================================
17-03-02 12:57:15.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:15.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:15.055 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.055 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:57:15.112 -08 000000123 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:57:15.112 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:15.113 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:15.174 -08 000000087 INF: FPGA: Recv TDIYERD 1492236
17-03-02 12:57:15.174 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:57:15.236 -08 000000054 INF: FPGA: Recv ZADCR 35277
17-03-02 12:57:15.236 -08 000000042 INF: At scan end Y pos = 14.922 and Z pos = -0.135. Y moved -48.539 mm
17-03-02 12:57:15.236 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:57:15.298 -08 000000123 INF: FPGA: Recv TDIPULSES 139265
17-03-02 12:57:15.298 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-03-02 12:57:15.298 -08 000000042 INF: TDIScan finished after 11977.1121 ms
17-03-02 12:57:15.298 -08 000000042 INF: Image[0]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm)
17-03-02 12:57:15.298 -08 000000042 INF: Image[2]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm)
17-03-02 12:57:15.300 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.334 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.548 um
17-03-02 12:57:15.334 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.335 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:57:15.362 -08 000000092 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:57:15.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.363 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:15.363 -08 000000054 INF: ===================Dither Clean Up Command===================
17-03-02 12:57:15.363 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:57:15.363 -08 000000009 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:57:15.363 -08 000000028 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:57:15.364 -08 000000009 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:57:15.364 -08 000000009 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:57:15.364 -08 000000039 INF: ======================================
17-03-02 12:57:15.364 -08 000000028 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:57:15.364 -08 000000028 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:57:15.364 -08 000000078 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:57:15.364 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:15.365 -08 000000078 INF: FPGA: Xmit ZSEL 0\n
17-03-02 12:57:15.367 -08 000000068 INF: ===================LFT:Extracting coords===================
17-03-02 12:57:15.392 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:15.393 -08 000000068 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-03-02 12:57:15.394 -08 000000032 INF: ===================LookupFocusTracking===================
17-03-02 12:57:15.394 -08 000000065 INF: ===================LookupFocusTracking===================
17-03-02 12:57:15.394 -08 000000010 INF: ===================LookupFocusTracking===================
17-03-02 12:57:15.394 -08 000000052 INF: ===================LookupFocusTracking===================
17-03-02 12:57:15.394 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:15.394 -08 000000065 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:15.394 -08 000000010 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:15.394 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:15.424 -08 000000091 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:15.424 -08 000000091 INF: FPGA: Recv ZSEL 
17-03-02 12:57:15.424 -08 000000078 INF: FPGA: Xmit ZDACW 40977\n
17-03-02 12:57:15.424 -08 000000028 INF: ======================================
17-03-02 12:57:15.425 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:15.426 -08 000000009 INF: Y Motor: Recv ok\r
17-03-02 12:57:15.426 -08 000000009 INF: ======================================
17-03-02 12:57:15.468 -08 000000032 INF: FC:B, C:161,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:15.468 -08 000000065 INF: FC:B, C:161,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:15.469 -08 000000010 INF: FC:B, C:161,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:15.469 -08 000000052 INF: FC:B, C:161,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:15.487 -08 000000097 INF: FPGA: Recv ZDACW 
17-03-02 12:57:15.487 -08 000000078 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-03-02 12:57:15.488 -08 000000078 INF: FPGA: Xmit TDIBB 0\n
17-03-02 12:57:15.550 -08 000000030 INF: FPGA: Recv TDIBB
17-03-02 12:57:15.550 -08 000000078 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:57:15.551 -08 000000078 INF: ======================================
17-03-02 12:57:15.619 -08 000000032 INF: LFT found best fwhm score 2.005343 in 151 ms
17-03-02 12:57:15.620 -08 000000032 INF: LFT found good score at index 4825 with fwhm value 2.005343. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:3,T
17-03-02 12:57:15.620 -08 000000065 INF: LFT found best fwhm score 2.000201 in 151 ms
17-03-02 12:57:15.620 -08 000000065 INF: LFT found good score at index 657 with fwhm value 2.000201. Next cycle, cycle 162 starting Z position for top surface is at -0.159 mm FC:B, C:161,L:3,T
17-03-02 12:57:15.620 -08 000000032 INF: ===================LookupFocusTracking===================
17-03-02 12:57:15.620 -08 000000065 INF: ===================LookupFocusTracking===================
17-03-02 12:57:15.620 -08 000000010 INF: LFT found best fwhm score 2.000038 in 151 ms
17-03-02 12:57:15.620 -08 000000010 INF: LFT found good score at index 4645 with fwhm value 2.000038. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:3,T
17-03-02 12:57:15.620 -08 000000032 INF: ======================================
17-03-02 12:57:15.620 -08 000000010 INF: ===================LookupFocusTracking===================
17-03-02 12:57:15.620 -08 000000052 INF: LFT found best fwhm score 2.193959 in 151 ms
17-03-02 12:57:15.620 -08 000000052 INF: LFT found good score at index 5109 with fwhm value 2.193959. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:3,T
17-03-02 12:57:15.620 -08 000000065 INF: ======================================
17-03-02 12:57:15.620 -08 000000052 INF: ===================LookupFocusTracking===================
17-03-02 12:57:15.620 -08 000000010 INF: ======================================
17-03-02 12:57:15.621 -08 000000052 INF: ======================================
17-03-02 12:57:15.621 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:15.622 -08 000000068 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:161,L:3,T
17-03-02 12:57:15.623 -08 000000068 INF: ======================================
17-03-02 12:57:15.624 -08 000000054 INF: ======================================
17-03-02 12:57:15.625 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:57:15.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:57:15.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:57:15.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:57:15.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-03-02 12:57:15.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-03-02 12:57:15.628 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Aspirating port PortB, Waiting for image analysis===================
17-03-02 12:57:15.628 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Aspirating port PortB===================
17-03-02 12:57:15.628 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Waiting for image analysis===================
17-03-02 12:57:15.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-03-02 12:57:15.651 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-03-02 12:57:15.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:15.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-03-02 12:57:15.652 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:15.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-03-02 12:57:15.652 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-03-02 12:57:15.652 -08 000000042 INF: Transformed XStagePosition from 75.26964 mm to 75.2468680609018 mm.
17-03-02 12:57:15.664 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5699943559021 mm.
17-03-02 12:57:15.664 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3699943559021 mm.
17-03-02 12:57:15.664 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4607443559021 mm.
17-03-02 12:57:15.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-03-02 12:57:15.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:15.667 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -156.3 um, section = C_1
17-03-02 12:57:15.669 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:15.669 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:15.672 -08 000000068 INF: ===================MoveEmissionFilters===================
17-03-02 12:57:15.674 -08 000000050 INF: ===================Move X,Y===================
17-03-02 12:57:15.676 -08 000000050 INF: ===================Move X,Y, Parallel===================
17-03-02 12:57:15.678 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:15.681 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:15.683 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:15.684 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-03-02 12:57:15.685 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:15.685 -08 000000036 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:57:15.686 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:15.687 -08 000000102 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:15.688 -08 000000102 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:15.690 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-03-02 12:57:15.691 -08 000000010 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:57:15.692 -08 000000010 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:57:15.692 -08 000000010 INF: ======================================
17-03-02 12:57:15.693 -08 000000054 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:15.693 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:15.694 -08 000000010 INF: ===================TDI Scan Setup===================
17-03-02 12:57:15.694 -08 000000030 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:57:15.694 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:15.694 -08 000000057 INF: ===================Camera Arm TDI===================
17-03-02 12:57:15.694 -08 000000030 INF: ======================================
17-03-02 12:57:15.694 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:15.695 -08 000000054 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:15.695 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:15.695 -08 000000010 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:57:15.696 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:15.696 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:15.696 -08 000000010 INF: FPGA: Xmit ZSEL 3\n
17-03-02 12:57:15.696 -08 000000030 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:57:15.696 -08 000000030 INF: ======================================
17-03-02 12:57:15.697 -08 000000072 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:15.697 -08 000000091 INF: ===================Move X Motor without settling===================
17-03-02 12:57:15.697 -08 000000072 INF: Y Motor: Moving to 64.5700 mm @25.000 mm/sec, started at 14.9223 mm
17-03-02 12:57:15.697 -08 000000091 INF: X Motor: Xmit PR VM\n
17-03-02 12:57:15.697 -08 000000072 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:15.697 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:15.701 -08 000000129 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:57:15.701 -08 000000074 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:57:15.702 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1103 Request: {"Cycle":161,"Lane":3,"Tile":1103,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF240","HCSMMF273","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.702 -08 000000074 INF: ======================================
17-03-02 12:57:15.702 -08 000000129 INF: ======================================
17-03-02 12:57:15.703 -08 000000128 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:57:15.704 -08 000000102 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:15.704 -08 000000128 INF: ======================================
17-03-02 12:57:15.706 -08 000000102 INF: ======================================
17-03-02 12:57:15.708 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:15.709 -08 000000083 INF: ======================================
17-03-02 12:57:15.736 -08 000000133 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:57:15.737 -08 000000133 INF: ======================================
17-03-02 12:57:15.742 -08 000000054 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:15.745 -08 000000054 INF: ======================================
17-03-02 12:57:15.781 -08 000000138 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:57:15.782 -08 000000044 INF: FPGA: Recv ZSEL 
17-03-02 12:57:15.783 -08 000000138 INF: ======================================
17-03-02 12:57:15.783 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:15.784 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:57:15.784 -08 000000072 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:15.784 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:15.784 -08 000000091 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:57:15.784 -08 000000091 INF: X Motor: Xmit PR VI\n
17-03-02 12:57:15.784 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:15.784 -08 000000010 INF: FPGA: Xmit TDIBB 1\n
17-03-02 12:57:15.786 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:15.790 -08 000000100 INF: ======================================
17-03-02 12:57:15.793 -08 000000068 INF: ======================================
17-03-02 12:57:15.849 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1107 Request: {"Cycle":161,"Lane":3,"Tile":1107,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF176","HCSMMF256","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.860 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1113 Request: {"Cycle":161,"Lane":3,"Tile":1113,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF195","HCSMMF272","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.861 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1112 Request: {"Cycle":161,"Lane":3,"Tile":1112,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF179","HCSMMF253","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.862 -08 000000136 INF: FPGA: Recv TDIBB
17-03-02 12:57:15.862 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1101 Request: {"Cycle":161,"Lane":3,"Tile":1101,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF277","HCSMMF283","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.862 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:15.864 -08 000000091 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:57:15.864 -08 000000091 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:57:15.864 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:57:15.864 -08 000000091 INF: X Motor: Moving to 75.2469 mm @15.000 mm/sec, started at 74.1465 mm
17-03-02 12:57:15.864 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:15.864 -08 000000010 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:57:15.864 -08 000000091 INF: X Motor: Xmit MA 6655\n
17-03-02 12:57:15.864 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:15.864 -08 000000115 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1105 Request: {"Cycle":161,"Lane":3,"Tile":1105,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF214","HCSMMF209","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.865 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1104 Request: {"Cycle":161,"Lane":3,"Tile":1104,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF213","HCSMMF222","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.866 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1106 Request: {"Cycle":161,"Lane":3,"Tile":1106,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF279","HCSMMF203","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.866 -08 000000010 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-03-02 12:57:15.866 -08 000000010 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-03-02 12:57:15.866 -08 000000010 INF: FPGA: Xmit ZSTEP 1792263\n
17-03-02 12:57:15.866 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1108 Request: {"Cycle":161,"Lane":3,"Tile":1108,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF255","HCSMMF186","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.867 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1102 Request: {"Cycle":161,"Lane":3,"Tile":1102,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF204","HCSMMF243","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.868 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1114 Request: {"Cycle":161,"Lane":3,"Tile":1114,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF239","HCSMMF220","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.868 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1115 Request: {"Cycle":161,"Lane":3,"Tile":1115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF246","HCSMMF219","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.869 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1110 Request: {"Cycle":161,"Lane":3,"Tile":1110,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF211","HCSMMF232","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.870 -08 000000128 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1116 Request: {"Cycle":161,"Lane":3,"Tile":1116,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF177","HCSMMF242","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.871 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1118 Request: {"Cycle":161,"Lane":3,"Tile":1118,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF274","HCSMMF257","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.872 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1117 Request: {"Cycle":161,"Lane":3,"Tile":1117,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF280","HCSMMF218","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.873 -08 000000122 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1109 Request: {"Cycle":161,"Lane":3,"Tile":1109,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF265","HCSMMF202","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.873 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1122 Request: {"Cycle":161,"Lane":3,"Tile":1122,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF252","HCSMMF254","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.875 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1120 Request: {"Cycle":161,"Lane":3,"Tile":1120,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF180","HCSMMF224","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.875 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1119 Request: {"Cycle":161,"Lane":3,"Tile":1119,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF208","HCSMMF236","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.876 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1123 Request: {"Cycle":161,"Lane":3,"Tile":1123,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF259","HCSMMF205","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.877 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1111 Request: {"Cycle":161,"Lane":3,"Tile":1111,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF196","HCSMMF266","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.877 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1121 Request: {"Cycle":161,"Lane":3,"Tile":1121,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF282","HCSMMF207","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.878 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1126 Request: {"Cycle":161,"Lane":3,"Tile":1126,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF271","HCSMMF249","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.879 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1125 Request: {"Cycle":161,"Lane":3,"Tile":1125,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF276","HCSMMF237","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.880 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1127 Request: {"Cycle":161,"Lane":3,"Tile":1127,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF245","HCSMMF194","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.881 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1128 Request: {"Cycle":161,"Lane":3,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF248","HCSMMF263","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.882 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1124 Request: {"Cycle":161,"Lane":3,"Tile":1124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF281","HCSMMF247","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:15.896 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:15.902 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-03-02 12:57:15.923 -08 000000086 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:15.923 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:15.924 -08 000000091 INF: X Motor: Recv MA 6655\r\n>
17-03-02 12:57:15.924 -08 000000072 INF: Y Motor: Recv v 0\r
17-03-02 12:57:15.924 -08 000000072 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:15.924 -08 000000091 INF: X Motor: WaitUntilStopped 60073
17-03-02 12:57:15.924 -08 000000072 INF: Y Motor: Set target position to 5956999 encoder counts
17-03-02 12:57:15.924 -08 000000072 INF: Y Motor: Xmit s r0xca 5956999\r
17-03-02 12:57:15.925 -08 000000010 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:57:15.925 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:15.927 -08 000000010 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:57:15.927 -08 000000010 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:57:15.927 -08 000000010 INF: Z Motor: Arming to move to -0.1163 mm
17-03-02 12:57:15.927 -08 000000010 INF: FPGA: Xmit ZYT 6436999 4\n
17-03-02 12:57:15.987 -08 000000062 INF: FPGA: Recv ZYT 
17-03-02 12:57:15.987 -08 000000010 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492234 enc / 14.922 mm / ) = 6436999 enc / 64.370 mm
17-03-02 12:57:15.987 -08 000000010 INF: FPGA: Xmit ZARM 30491\n
17-03-02 12:57:15.989 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:57:15.989 -08 000000072 INF: Y Motor: Start the move command
17-03-02 12:57:15.989 -08 000000072 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:15.991 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:15.991 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-03-02 12:57:16.028 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:16.033 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:16.034 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-03-02 12:57:16.047 -08 000000052 INF: FPGA: Recv ZARM
17-03-02 12:57:16.047 -08 000000010 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.8921 ms
17-03-02 12:57:16.047 -08 000000010 INF: Z Motor: ArmAbsStepped took 119.8314 ms
17-03-02 12:57:16.047 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:16.049 -08 000000010 INF: ===================TDI Scan Setup===================
17-03-02 12:57:16.050 -08 000000010 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:57:16.051 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:57:16.051 -08 000000072 INF: Y Motor: WaitUntilStopped 61986
17-03-02 12:57:16.051 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:16.051 -08 000000010 INF: ===================TDI Scan Setup===================
17-03-02 12:57:16.053 -08 000000010 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:57:16.053 -08 000000010 INF: ===================TDI Scan Setup===================
17-03-02 12:57:16.054 -08 000000010 INF: ======================================
17-03-02 12:57:16.114 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:16.117 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:16.123 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-03-02 12:57:16.176 -08 000000072 INF: Y Motor: Unshifted Position: 1075933
17-03-02 12:57:16.208 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:16.214 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-03-02 12:57:16.226 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:16.287 -08 000000057 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:57:16.287 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:57:16.287 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:16.302 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:16.303 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:16.304 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:16.349 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:16.364 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:16.424 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:16.424 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:16.424 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:16.425 -08 000000018 INF: WaitCommand(5000) start
17-03-02 12:57:16.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Delay 5 of 5 seconds left===================
17-03-02 12:57:16.488 -08 000000072 INF: Y Motor: Unshifted Position: 1778067
17-03-02 12:57:16.538 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:16.550 -08 000000091 INF: X Motor: Xmit PR ER\n
17-03-02 12:57:16.586 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-03-02 12:57:16.612 -08 000000091 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:57:16.612 -08 000000091 INF: X Motor: Moved to 75.2476 after 688 ms
17-03-02 12:57:16.612 -08 000000091 INF: ======================================
17-03-02 12:57:16.664 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:16.802 -08 000000072 INF: Y Motor: Unshifted Position: 2561413
17-03-02 12:57:16.852 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:16.902 -08 000000057 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:57:16.902 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:57:16.902 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:16.917 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:16.919 -08 000000057 INF: ===================Camera Arm TDI===================
17-03-02 12:57:16.920 -08 000000057 INF: ======================================
17-03-02 12:57:16.921 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:16.922 -08 000000036 INF: ======================================
17-03-02 12:57:16.973 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:17.110 -08 000000072 INF: Y Motor: Unshifted Position: 3337210
17-03-02 12:57:17.160 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:17.287 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:17.423 -08 000000072 INF: Y Motor: Unshifted Position: 4119772
17-03-02 12:57:17.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:17.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Delay 4 of 5 seconds left===================
17-03-02 12:57:17.473 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:17.597 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:17.736 -08 000000072 INF: Y Motor: Unshifted Position: 4894702
17-03-02 12:57:17.786 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:17.910 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:18.046 -08 000000072 INF: Y Motor: Unshifted Position: 5676976
17-03-02 12:57:18.096 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:18.223 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:18.359 -08 000000072 INF: Y Motor: Unshifted Position: 5957000
17-03-02 12:57:18.359 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:18.359 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:18.421 -08 000000072 INF: Y Motor: Recv v 0\r
17-03-02 12:57:18.421 -08 000000072 INF: Y Motor: Moved to 64.5700 after 2370 ms
17-03-02 12:57:18.421 -08 000000072 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:18.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:18.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Delay 3 of 5 seconds left===================
17-03-02 12:57:18.483 -08 000000072 INF: Y Motor: Recv v 4096\r
17-03-02 12:57:18.483 -08 000000072 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:18.483 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:18.545 -08 000000072 INF: Y Motor: Recv v 0\r
17-03-02 12:57:18.545 -08 000000072 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:18.545 -08 000000072 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:18.607 -08 000000072 INF: Y Motor: Recv v 402653184\r
17-03-02 12:57:18.607 -08 000000072 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:57:18.607 -08 000000072 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:18.607 -08 000000072 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:18.672 -08 000000072 INF: Y Motor: Recv v 0\r
17-03-02 12:57:18.672 -08 000000072 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:18.672 -08 000000072 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:18.672 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:18.732 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:57:18.732 -08 000000072 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:18.732 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:18.797 -08 000000072 INF: Y Motor: Recv ok\r
17-03-02 12:57:18.797 -08 000000072 INF: ======================================
17-03-02 12:57:18.798 -08 000000050 INF: ===================Move X,Y===================
17-03-02 12:57:18.800 -08 000000050 INF: ======================================
17-03-02 12:57:18.801 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:18.802 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:18.802 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-03-02 12:57:18.802 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-03-02 12:57:18.859 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:57:18.859 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-03-02 12:57:18.919 -08 000000030 INF: FPGA: Recv ZFREQCL
17-03-02 12:57:18.919 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:57:18.920 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:18.920 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:18.983 -08 000000072 INF: FPGA: Recv TDIYERD 6457000
17-03-02 12:57:18.984 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457000 counts (64.570 mm)
17-03-02 12:57:18.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:18.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:18.985 -08 000000129 INF: ===================TDI FPGA Arm===================
17-03-02 12:57:18.986 -08 000000102 INF: ===================Set YMotor gains for scans===================
17-03-02 12:57:18.986 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:18.986 -08 000000102 INF: ======================================
17-03-02 12:57:18.987 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:57:18.987 -08 000000129 INF: FPGA: Xmit TDIYPOS 6346074\n
17-03-02 12:57:19.045 -08 000000092 INF: FPGA: Recv TDIYPOS
17-03-02 12:57:19.046 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:19.048 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:57:19.048 -08 000000129 INF: FPGA: Xmit TDIYARM3 139264 6436999 1 1\n
17-03-02 12:57:19.105 -08 000000025 INF: FPGA: Recv TDIYARM3
17-03-02 12:57:19.105 -08 000000129 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:19.107 -08 000000129 INF: ===================TDI FPGA Arm===================
17-03-02 12:57:19.108 -08 000000129 INF: ======================================
17-03-02 12:57:19.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:19.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:19.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:19.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:19.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:19.112 -08 000000044 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:57:19.112 -08 000000102 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:57:19.112 -08 000000044 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:57:19.112 -08 000000102 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:57:19.112 -08 000000102 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:57:19.112 -08 000000102 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:57:19.112 -08 000000102 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:57:19.112 -08 000000044 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:57:19.112 -08 000000044 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:57:19.113 -08 000000044 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:57:19.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:19.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Delay 2 of 5 seconds left===================
17-03-02 12:57:19.481 -08 000000078 INF: FPGA: Recv EX1MV
17-03-02 12:57:19.481 -08 000000078 INF: FPGA: Recv EX2MV
17-03-02 12:57:19.481 -08 000000044 INF: Excitation Filter 2: Moved -107 steps in 368.744 ms
17-03-02 12:57:19.481 -08 000000044 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.3203 ms
17-03-02 12:57:19.481 -08 000000044 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.3972 ms
17-03-02 12:57:19.481 -08 000000102 INF: Excitation Filter 1: Moved -107 steps in 369.0481 ms
17-03-02 12:57:19.481 -08 000000102 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.4636 ms
17-03-02 12:57:19.481 -08 000000102 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.6005 ms
17-03-02 12:57:19.482 -08 000000044 INF: ======================================
17-03-02 12:57:19.482 -08 000000102 INF: ======================================
17-03-02 12:57:19.483 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:19.485 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:19.486 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:19.486 -08 000000065 INF: ===================Camera TDI===================
17-03-02 12:57:19.486 -08 000000087 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:57:19.486 -08 000000087 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:57:19.487 -08 000000065 INF: ===================Camera TDI, Parallel===================
17-03-02 12:57:19.487 -08 000000061 INF: ===================FPGA Z Wait===================
17-03-02 12:57:19.488 -08 000000112 INF: ===================Camera TDI===================
17-03-02 12:57:19.489 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:19.489 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:19.491 -08 000000061 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:57:19.492 -08 000000068 INF: ===================Camera TDI===================
17-03-02 12:57:19.492 -08 000000097 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:19.493 -08 000000097 INF: Y Motor: Moving to 14.9217 mm @6.500 mm/sec, started at 64.5700 mm
17-03-02 12:57:19.493 -08 000000097 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:19.493 -08 000000097 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:19.493 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:19.493 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:19.545 -08 000000097 INF: Y Motor: Recv ok\r
17-03-02 12:57:19.545 -08 000000097 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:19.545 -08 000000097 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:19.607 -08 000000097 INF: Y Motor: Recv ok\r
17-03-02 12:57:19.607 -08 000000097 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:19.639 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:19.639 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:19.643 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:19.643 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:19.669 -08 000000097 INF: Y Motor: Recv v 0\r
17-03-02 12:57:19.669 -08 000000097 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:19.669 -08 000000097 INF: Y Motor: Set target position to 992166 encoder counts
17-03-02 12:57:19.669 -08 000000097 INF: Y Motor: Xmit s r0xca 992166\r
17-03-02 12:57:19.733 -08 000000097 INF: Y Motor: Recv ok\r
17-03-02 12:57:19.733 -08 000000097 INF: Y Motor: Start the move command
17-03-02 12:57:19.733 -08 000000097 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:19.789 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:19.789 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:19.793 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:19.793 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:19.795 -08 000000097 INF: Y Motor: Recv ok\r
17-03-02 12:57:19.795 -08 000000097 INF: Y Motor: WaitUntilStopped 67638
17-03-02 12:57:19.795 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:19.855 -08 000000105 INF: FPGA: Recv ZWAIT 
17-03-02 12:57:19.856 -08 000000061 INF: ======================================
17-03-02 12:57:19.919 -08 000000097 INF: Y Motor: Unshifted Position: 5895151
17-03-02 12:57:19.939 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:19.939 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:19.939 -08 000000112 INF: ===================Camera #0 Frame #5===================
17-03-02 12:57:19.943 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:19.943 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:19.943 -08 000000068 INF: ===================Camera #2 Frame #5===================
17-03-02 12:57:19.969 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:20.094 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:20.104 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:57:20.104 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:57:20.104 -08 000000112 INF: ===================Camera #0 Frame #11===================
17-03-02 12:57:20.109 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:57:20.109 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:57:20.109 -08 000000068 INF: ===================Camera #2 Frame #11===================
17-03-02 12:57:20.230 -08 000000097 INF: Y Motor: Unshifted Position: 5692778
17-03-02 12:57:20.275 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:57:20.275 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:57:20.275 -08 000000112 INF: ===================Camera #0 Frame #17===================
17-03-02 12:57:20.280 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:20.288 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:57:20.288 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:57:20.288 -08 000000068 INF: ===================Camera #2 Frame #17===================
17-03-02 12:57:20.407 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:20.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:20.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Delay 1 of 5 seconds left===================
17-03-02 12:57:20.448 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:57:20.448 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:57:20.448 -08 000000112 INF: ===================Camera #0 Frame #23===================
17-03-02 12:57:20.459 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-03-02 12:57:20.459 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-03-02 12:57:20.459 -08 000000068 INF: ===================Camera #2 Frame #24===================
17-03-02 12:57:20.543 -08 000000097 INF: Y Motor: Unshifted Position: 5489339
17-03-02 12:57:20.593 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:20.617 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-03-02 12:57:20.617 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-03-02 12:57:20.617 -08 000000112 INF: ===================Camera #0 Frame #30===================
17-03-02 12:57:20.636 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-03-02 12:57:20.636 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-03-02 12:57:20.636 -08 000000068 INF: ===================Camera #2 Frame #30===================
17-03-02 12:57:20.717 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:20.788 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:57:20.788 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:57:20.788 -08 000000112 INF: ===================Camera #0 Frame #36===================
17-03-02 12:57:20.806 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:57:20.806 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:57:20.806 -08 000000068 INF: ===================Camera #2 Frame #36===================
17-03-02 12:57:20.854 -08 000000097 INF: Y Motor: Unshifted Position: 5285664
17-03-02 12:57:20.904 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:20.959 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:57:20.959 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:57:20.959 -08 000000112 INF: ===================Camera #0 Frame #42===================
17-03-02 12:57:20.976 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-03-02 12:57:20.976 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-03-02 12:57:20.976 -08 000000068 INF: ===================Camera #2 Frame #43===================
17-03-02 12:57:21.031 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:21.128 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:57:21.128 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:57:21.128 -08 000000112 INF: ===================Camera #0 Frame #48===================
17-03-02 12:57:21.149 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-03-02 12:57:21.149 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-03-02 12:57:21.149 -08 000000068 INF: ===================Camera #2 Frame #49===================
17-03-02 12:57:21.167 -08 000000097 INF: Y Motor: Unshifted Position: 5083512
17-03-02 12:57:21.217 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:21.297 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-03-02 12:57:21.297 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-03-02 12:57:21.297 -08 000000112 INF: ===================Camera #0 Frame #55===================
17-03-02 12:57:21.319 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-03-02 12:57:21.319 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-03-02 12:57:21.319 -08 000000068 INF: ===================Camera #2 Frame #55===================
17-03-02 12:57:21.342 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:21.426 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:21.426 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:21.426 -08 000000018 INF: WaitCommand(5000) end
17-03-02 12:57:21.426 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:21.469 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:57:21.469 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:57:21.469 -08 000000112 INF: ===================Camera #0 Frame #61===================
17-03-02 12:57:21.481 -08 000000097 INF: Y Motor: Unshifted Position: 4881574
17-03-02 12:57:21.488 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-03-02 12:57:21.488 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-03-02 12:57:21.488 -08 000000068 INF: ===================Camera #2 Frame #62===================
17-03-02 12:57:21.525 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:57:21.531 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:21.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-03-02 12:57:21.604 -08 000000018 INF: Current Position of Pump is: 7680
17-03-02 12:57:21.637 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-03-02 12:57:21.637 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-03-02 12:57:21.637 -08 000000112 INF: ===================Camera #0 Frame #67===================
17-03-02 12:57:21.657 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:21.660 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-03-02 12:57:21.660 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-03-02 12:57:21.660 -08 000000068 INF: ===================Camera #2 Frame #68===================
17-03-02 12:57:21.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:57:21.792 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-03-02 12:57:21.792 -08 000000018 INF: Current Position of Pump is: 7680
17-03-02 12:57:21.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6), Dispensing port PortC===================
17-03-02 12:57:21.793 -08 000000097 INF: Y Motor: Unshifted Position: 4678998
17-03-02 12:57:21.805 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:57:21.805 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:57:21.805 -08 000000112 INF: ===================Camera #0 Frame #73===================
17-03-02 12:57:21.829 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-03-02 12:57:21.829 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-03-02 12:57:21.829 -08 000000068 INF: ===================Camera #2 Frame #74===================
17-03-02 12:57:21.843 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:21.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD7680R\r
17-03-02 12:57:21.969 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:21.973 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-03-02 12:57:21.973 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-03-02 12:57:21.973 -08 000000112 INF: ===================Camera #0 Frame #79===================
17-03-02 12:57:21.978 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:21.999 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-03-02 12:57:21.999 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-03-02 12:57:21.999 -08 000000068 INF: ===================Camera #2 Frame #80===================
17-03-02 12:57:22.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:22.103 -08 000000097 INF: Y Motor: Unshifted Position: 4475321
17-03-02 12:57:22.141 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-03-02 12:57:22.141 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-03-02 12:57:22.141 -08 000000112 INF: ===================Camera #0 Frame #86===================
17-03-02 12:57:22.153 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:22.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:22.168 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-03-02 12:57:22.168 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-03-02 12:57:22.168 -08 000000068 INF: ===================Camera #2 Frame #87===================
17-03-02 12:57:22.278 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:22.312 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:57:22.312 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:57:22.312 -08 000000112 INF: ===================Camera #0 Frame #92===================
17-03-02 12:57:22.340 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-03-02 12:57:22.340 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-03-02 12:57:22.340 -08 000000068 INF: ===================Camera #2 Frame #93===================
17-03-02 12:57:22.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:22.418 -08 000000097 INF: Y Motor: Unshifted Position: 4271869
17-03-02 12:57:22.468 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:22.477 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:22.480 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:57:22.480 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:57:22.480 -08 000000112 INF: ===================Camera #0 Frame #98===================
17-03-02 12:57:22.509 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-03-02 12:57:22.509 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-03-02 12:57:22.509 -08 000000068 INF: ===================Camera #2 Frame #99===================
17-03-02 12:57:22.590 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:22.648 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-03-02 12:57:22.648 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-03-02 12:57:22.648 -08 000000112 INF: ===================Camera #0 Frame #104===================
17-03-02 12:57:22.678 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-03-02 12:57:22.678 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-03-02 12:57:22.678 -08 000000068 INF: ===================Camera #2 Frame #105===================
17-03-02 12:57:22.727 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:22.729 -08 000000097 INF: Y Motor: Unshifted Position: 4070150
17-03-02 12:57:22.779 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:22.788 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:22.816 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-03-02 12:57:22.816 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-03-02 12:57:22.816 -08 000000112 INF: ===================Camera #0 Frame #110===================
17-03-02 12:57:22.847 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-03-02 12:57:22.847 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-03-02 12:57:22.847 -08 000000068 INF: ===================Camera #2 Frame #112===================
17-03-02 12:57:22.901 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:22.984 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:57:22.984 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:57:22.984 -08 000000112 INF: ===================Camera #0 Frame #117===================
17-03-02 12:57:23.019 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-03-02 12:57:23.019 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-03-02 12:57:23.019 -08 000000068 INF: ===================Camera #2 Frame #118===================
17-03-02 12:57:23.038 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:23.041 -08 000000097 INF: Y Motor: Unshifted Position: 3866052
17-03-02 12:57:23.091 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:23.102 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:23.155 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-03-02 12:57:23.155 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-03-02 12:57:23.155 -08 000000112 INF: ===================Camera #0 Frame #123===================
17-03-02 12:57:23.189 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-03-02 12:57:23.189 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-03-02 12:57:23.189 -08 000000068 INF: ===================Camera #2 Frame #124===================
17-03-02 12:57:23.214 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:23.325 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-03-02 12:57:23.325 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-03-02 12:57:23.325 -08 000000112 INF: ===================Camera #0 Frame #129===================
17-03-02 12:57:23.352 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:23.353 -08 000000097 INF: Y Motor: Unshifted Position: 3664334
17-03-02 12:57:23.360 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-03-02 12:57:23.360 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-03-02 12:57:23.360 -08 000000068 INF: ===================Camera #2 Frame #130===================
17-03-02 12:57:23.403 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:23.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (6)===================
17-03-02 12:57:23.414 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-02 12:57:23.495 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-03-02 12:57:23.495 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-03-02 12:57:23.495 -08 000000112 INF: ===================Camera #0 Frame #135===================
17-03-02 12:57:23.527 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:23.531 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-03-02 12:57:23.531 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-03-02 12:57:23.531 -08 000000068 INF: ===================Camera #2 Frame #137===================
17-03-02 12:57:23.663 -08 000000097 INF: Y Motor: Unshifted Position: 3460666
17-03-02 12:57:23.665 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-03-02 12:57:23.665 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-03-02 12:57:23.665 -08 000000112 INF: ===================Camera #0 Frame #142===================
17-03-02 12:57:23.705 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-03-02 12:57:23.705 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-03-02 12:57:23.705 -08 000000068 INF: ===================Camera #2 Frame #143===================
17-03-02 12:57:23.713 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:23.837 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:23.838 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-03-02 12:57:23.838 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-03-02 12:57:23.838 -08 000000112 INF: ===================Camera #0 Frame #148===================
17-03-02 12:57:23.876 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-03-02 12:57:23.876 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-03-02 12:57:23.876 -08 000000068 INF: ===================Camera #2 Frame #149===================
17-03-02 12:57:23.976 -08 000000097 INF: Y Motor: Unshifted Position: 3257219
17-03-02 12:57:24.008 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-03-02 12:57:24.008 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-03-02 12:57:24.008 -08 000000112 INF: ===================Camera #0 Frame #154===================
17-03-02 12:57:24.026 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:24.047 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-03-02 12:57:24.047 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-03-02 12:57:24.047 -08 000000068 INF: ===================Camera #2 Frame #156===================
17-03-02 12:57:24.150 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:24.178 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-03-02 12:57:24.178 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-03-02 12:57:24.178 -08 000000112 INF: ===================Camera #0 Frame #161===================
17-03-02 12:57:24.221 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-03-02 12:57:24.221 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-03-02 12:57:24.221 -08 000000068 INF: ===================Camera #2 Frame #162===================
17-03-02 12:57:24.289 -08 000000097 INF: Y Motor: Unshifted Position: 3055720
17-03-02 12:57:24.339 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:24.351 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-03-02 12:57:24.351 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-03-02 12:57:24.351 -08 000000112 INF: ===================Camera #0 Frame #167===================
17-03-02 12:57:24.392 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-03-02 12:57:24.392 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-03-02 12:57:24.392 -08 000000068 INF: ===================Camera #2 Frame #168===================
17-03-02 12:57:24.463 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:24.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-03-02 12:57:24.521 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-03-02 12:57:24.521 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-03-02 12:57:24.521 -08 000000112 INF: ===================Camera #0 Frame #173===================
17-03-02 12:57:24.562 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-03-02 12:57:24.562 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-03-02 12:57:24.562 -08 000000068 INF: ===================Camera #2 Frame #175===================
17-03-02 12:57:24.598 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:24.599 -08 000000097 INF: Y Motor: Unshifted Position: 2852061
17-03-02 12:57:24.649 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:24.691 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-03-02 12:57:24.691 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-03-02 12:57:24.691 -08 000000112 INF: ===================Camera #0 Frame #179===================
17-03-02 12:57:24.698 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:24.736 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-03-02 12:57:24.736 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-03-02 12:57:24.736 -08 000000068 INF: ===================Camera #2 Frame #181===================
17-03-02 12:57:24.773 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:24.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:24.861 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-03-02 12:57:24.861 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-03-02 12:57:24.861 -08 000000112 INF: ===================Camera #0 Frame #186===================
17-03-02 12:57:24.907 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-03-02 12:57:24.907 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-03-02 12:57:24.907 -08 000000068 INF: ===================Camera #2 Frame #187===================
17-03-02 12:57:24.912 -08 000000097 INF: Y Motor: Unshifted Position: 2647317
17-03-02 12:57:24.962 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:25.034 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-03-02 12:57:25.034 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-03-02 12:57:25.034 -08 000000112 INF: ===================Camera #0 Frame #192===================
17-03-02 12:57:25.037 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:25.078 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-03-02 12:57:25.078 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-03-02 12:57:25.078 -08 000000068 INF: ===================Camera #2 Frame #194===================
17-03-02 12:57:25.086 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:25.097 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:25.097 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:25.097 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-03-02 12:57:25.204 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-03-02 12:57:25.204 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-03-02 12:57:25.204 -08 000000112 INF: ===================Camera #0 Frame #198===================
17-03-02 12:57:25.222 -08 000000097 INF: Y Motor: Unshifted Position: 2446901
17-03-02 12:57:25.252 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-03-02 12:57:25.252 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-03-02 12:57:25.252 -08 000000068 INF: ===================Camera #2 Frame #200===================
17-03-02 12:57:25.272 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:25.374 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-03-02 12:57:25.374 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-03-02 12:57:25.374 -08 000000112 INF: ===================Camera #0 Frame #205===================
17-03-02 12:57:25.399 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:25.422 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-03-02 12:57:25.422 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-03-02 12:57:25.422 -08 000000068 INF: ===================Camera #2 Frame #206===================
17-03-02 12:57:25.536 -08 000000097 INF: Y Motor: Unshifted Position: 2242794
17-03-02 12:57:25.546 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-03-02 12:57:25.546 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-03-02 12:57:25.546 -08 000000112 INF: ===================Camera #0 Frame #211===================
17-03-02 12:57:25.586 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:25.592 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-03-02 12:57:25.592 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-03-02 12:57:25.592 -08 000000068 INF: ===================Camera #2 Frame #213===================
17-03-02 12:57:25.710 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:25.714 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-03-02 12:57:25.714 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-03-02 12:57:25.714 -08 000000112 INF: ===================Camera #0 Frame #217===================
17-03-02 12:57:25.720 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:25.720 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:25.721 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Buffer Wash===================
17-03-02 12:57:25.721 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle===================
17-03-02 12:57:25.722 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:25.722 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:25.723 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:25.723 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-03-02 12:57:25.723 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-03-02 12:57:25.724 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°===================
17-03-02 12:57:25.764 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-03-02 12:57:25.764 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-03-02 12:57:25.764 -08 000000068 INF: ===================Camera #2 Frame #219===================
17-03-02 12:57:25.847 -08 000000097 INF: Y Motor: Unshifted Position: 2041086
17-03-02 12:57:25.884 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-03-02 12:57:25.884 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-03-02 12:57:25.884 -08 000000112 INF: ===================Camera #0 Frame #223===================
17-03-02 12:57:25.897 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:25.935 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-03-02 12:57:25.935 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-03-02 12:57:25.935 -08 000000068 INF: ===================Camera #2 Frame #225===================
17-03-02 12:57:25.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-03-02 12:57:25.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-03-02 12:57:25.972 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-03-02 12:57:25.972 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-03-02 12:57:25.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:25.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:25.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:25.974 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:26.023 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:26.035 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:26.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-03-02 12:57:26.035 -08 000000018 INF: Valve A1: Go to position 1
17-03-02 12:57:26.035 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:57:26.054 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-03-02 12:57:26.054 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-03-02 12:57:26.054 -08 000000112 INF: ===================Camera #0 Frame #230===================
17-03-02 12:57:26.097 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 6\r
17-03-02 12:57:26.097 -08 000000018 INF: Valve A1: 17.751 seconds since last move, > 10.000 seconds required between moves
17-03-02 12:57:26.097 -08 000000018 INF: Valve A1: Taking longest path 'CC' from 6 to 1 to avoid 7
17-03-02 12:57:26.097 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC1\r
17-03-02 12:57:26.097 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-03-02 12:57:26.097 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-03-02 12:57:26.106 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-03-02 12:57:26.106 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-03-02 12:57:26.106 -08 000000068 INF: ===================Camera #2 Frame #232===================
17-03-02 12:57:26.160 -08 000000097 INF: Y Motor: Unshifted Position: 1836764
17-03-02 12:57:26.210 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:26.227 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-03-02 12:57:26.227 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-03-02 12:57:26.227 -08 000000112 INF: ===================Camera #0 Frame #236===================
17-03-02 12:57:26.280 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-03-02 12:57:26.280 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-03-02 12:57:26.280 -08 000000068 INF: ===================Camera #2 Frame #238===================
17-03-02 12:57:26.334 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:26.397 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-03-02 12:57:26.397 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-03-02 12:57:26.397 -08 000000112 INF: ===================Camera #0 Frame #242===================
17-03-02 12:57:26.451 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-03-02 12:57:26.451 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-03-02 12:57:26.451 -08 000000068 INF: ===================Camera #2 Frame #244===================
17-03-02 12:57:26.472 -08 000000097 INF: Y Motor: Unshifted Position: 1635265
17-03-02 12:57:26.522 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:26.566 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-03-02 12:57:26.566 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-03-02 12:57:26.566 -08 000000112 INF: ===================Camera #0 Frame #249===================
17-03-02 12:57:26.621 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-03-02 12:57:26.621 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-03-02 12:57:26.621 -08 000000068 INF: ===================Camera #2 Frame #251===================
17-03-02 12:57:26.647 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:26.721 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 1\r
17-03-02 12:57:26.721 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:26.721 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-03-02 12:57:26.739 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-03-02 12:57:26.739 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-03-02 12:57:26.739 -08 000000112 INF: ===================Camera #0 Frame #255===================
17-03-02 12:57:26.784 -08 000000097 INF: Y Motor: Unshifted Position: 1430938
17-03-02 12:57:26.795 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-03-02 12:57:26.795 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-03-02 12:57:26.795 -08 000000068 INF: ===================Camera #2 Frame #257===================
17-03-02 12:57:26.834 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:26.907 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-03-02 12:57:26.907 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-03-02 12:57:26.907 -08 000000112 INF: ===================Camera #0 Frame #261===================
17-03-02 12:57:26.958 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:26.966 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-03-02 12:57:26.966 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-03-02 12:57:26.966 -08 000000068 INF: ===================Camera #2 Frame #263===================
17-03-02 12:57:27.077 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-03-02 12:57:27.077 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-03-02 12:57:27.077 -08 000000112 INF: ===================Camera #0 Frame #267===================
17-03-02 12:57:27.096 -08 000000097 INF: Y Motor: Unshifted Position: 1228137
17-03-02 12:57:27.137 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-03-02 12:57:27.137 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-03-02 12:57:27.137 -08 000000068 INF: ===================Camera #2 Frame #270===================
17-03-02 12:57:27.146 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:27.218 -08 000000088 INF: FPGA: Recv TDIYWAIT
17-03-02 12:57:27.218 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:27.220 -08 000000087 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:57:27.221 -08 000000086 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:57:27.221 -08 000000009 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:57:27.221 -08 000000086 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:57:27.221 -08 000000086 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:57:27.221 -08 000000086 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:57:27.221 -08 000000086 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:57:27.221 -08 000000009 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:57:27.221 -08 000000009 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:57:27.221 -08 000000009 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:57:27.222 -08 000000009 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:57:27.246 -08 000000112 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:57:27.246 -08 000000112 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:57:27.246 -08 000000112 INF: ===================Camera #0 Frame #272===================
17-03-02 12:57:27.262 -08 000000112 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:57:27.263 -08 000000112 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:27.270 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:27.394 -08 000000112 INF: Camera #0 ReleaseBuffer
17-03-02 12:57:27.394 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:57:27.394 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:57:27.394 -08 000000068 INF: ===================Camera #2 Frame #272===================
17-03-02 12:57:27.394 -08 000000112 INF: ===================Camera TDI===================
17-03-02 12:57:27.400 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:57:27.401 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:27.406 -08 000000097 INF: Y Motor: Unshifted Position: 1026634
17-03-02 12:57:27.423 -08 000000112 INF: ======================================
17-03-02 12:57:27.456 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:27.530 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:27.530 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:27.533 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:27.570 -08 000000068 INF: Camera #2 ReleaseBuffer
17-03-02 12:57:27.570 -08 000000068 INF: ===================Camera TDI===================
17-03-02 12:57:27.594 -08 000000053 INF: FPGA: Recv EX1MV
17-03-02 12:57:27.594 -08 000000053 INF: FPGA: Recv EX2MV
17-03-02 12:57:27.594 -08 000000009 INF: Excitation Filter 2: Moved 107 steps in 372.6943 ms
17-03-02 12:57:27.594 -08 000000086 INF: Excitation Filter 1: Moved 107 steps in 373.0068 ms
17-03-02 12:57:27.594 -08 000000086 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.1365 ms
17-03-02 12:57:27.594 -08 000000086 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.2148 ms
17-03-02 12:57:27.594 -08 000000009 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.7985 ms
17-03-02 12:57:27.594 -08 000000009 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.1719 ms
17-03-02 12:57:27.594 -08 000000086 INF: ======================================
17-03-02 12:57:27.595 -08 000000009 INF: ======================================
17-03-02 12:57:27.595 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:27.596 -08 000000097 INF: Y Motor: Unshifted Position: 992166
17-03-02 12:57:27.596 -08 000000097 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:27.596 -08 000000097 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:27.596 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:27.597 -08 000000087 INF: ======================================
17-03-02 12:57:27.603 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-03-02 12:57:27.603 -08 000000068 INF: ======================================
17-03-02 12:57:27.605 -08 000000065 INF: ===================Camera TDI===================
17-03-02 12:57:27.606 -08 000000065 INF: ======================================
17-03-02 12:57:27.658 -08 000000097 INF: Y Motor: Recv v 0\r
17-03-02 12:57:27.658 -08 000000097 INF: Y Motor: Moved to 14.9217 after 7862 ms
17-03-02 12:57:27.658 -08 000000097 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:27.695 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:57:27.720 -08 000000097 INF: Y Motor: Recv v 4097\r
17-03-02 12:57:27.720 -08 000000097 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:27.720 -08 000000097 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:27.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-03-02 12:57:27.781 -08 000000018 INF: Current Position of Pump is: 0
17-03-02 12:57:27.782 -08 000000097 INF: Y Motor: Recv v 0\r
17-03-02 12:57:27.782 -08 000000097 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:27.782 -08 000000097 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:27.843 -08 000000097 INF: Y Motor: Recv v 134217728\r
17-03-02 12:57:27.843 -08 000000097 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:57:27.843 -08 000000097 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:27.843 -08 000000097 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:27.881 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-03-02 12:57:27.908 -08 000000097 INF: Y Motor: Recv v 0\r
17-03-02 12:57:27.908 -08 000000097 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:27.908 -08 000000097 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:27.908 -08 000000097 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:27.969 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:27.970 -08 000000097 INF: Y Motor: Recv ok\r
17-03-02 12:57:27.970 -08 000000097 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:27.970 -08 000000097 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:28.032 -08 000000097 INF: Y Motor: Recv ok\r
17-03-02 12:57:28.032 -08 000000097 INF: ======================================
17-03-02 12:57:28.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:28.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:28.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.035 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:57:28.069 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:28.092 -08 000000091 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:57:28.092 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:28.154 -08 000000095 INF: FPGA: Recv TDIYERD 1492167
17-03-02 12:57:28.154 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:57:28.155 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:28.216 -08 000000102 INF: FPGA: Recv ZADCR 35394
17-03-02 12:57:28.216 -08 000000042 INF: At scan end Y pos = 14.922 and Z pos = -0.135. Y moved -48.539 mm
17-03-02 12:57:28.216 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:57:28.278 -08 000000085 INF: FPGA: Recv TDIPULSES 139265
17-03-02 12:57:28.278 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-03-02 12:57:28.278 -08 000000042 INF: TDIScan finished after 12625.0581 ms
17-03-02 12:57:28.278 -08 000000042 INF: Image[0]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm)
17-03-02 12:57:28.278 -08 000000042 INF: Image[2]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm)
17-03-02 12:57:28.280 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.315 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.631 um
17-03-02 12:57:28.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.316 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:57:28.340 -08 000000095 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:57:28.340 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.341 -08 000000116 INF: ===================Dither Clean Up Command===================
17-03-02 12:57:28.341 -08 000000030 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:57:28.341 -08 000000102 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:57:28.341 -08 000000106 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:57:28.341 -08 000000106 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:57:28.341 -08 000000106 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:57:28.342 -08 000000102 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:57:28.342 -08 000000030 INF: ======================================
17-03-02 12:57:28.342 -08 000000102 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:57:28.342 -08 000000086 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:57:28.342 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:28.343 -08 000000086 INF: FPGA: Xmit ZSEL 0\n
17-03-02 12:57:28.345 -08 000000033 INF: ===================LFT:Extracting coords===================
17-03-02 12:57:28.370 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:28.371 -08 000000033 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-03-02 12:57:28.372 -08 000000029 INF: ===================LookupFocusTracking===================
17-03-02 12:57:28.372 -08 000000138 INF: ===================LookupFocusTracking===================
17-03-02 12:57:28.372 -08 000000073 INF: ===================LookupFocusTracking===================
17-03-02 12:57:28.372 -08 000000044 INF: ===================LookupFocusTracking===================
17-03-02 12:57:28.372 -08 000000029 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:28.372 -08 000000073 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:28.372 -08 000000044 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:28.373 -08 000000138 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:28.405 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:28.406 -08 000000050 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:28.406 -08 000000050 INF: FPGA: Recv ZSEL 
17-03-02 12:57:28.406 -08 000000086 INF: FPGA: Xmit ZDACW 40977\n
17-03-02 12:57:28.406 -08 000000106 INF: ======================================
17-03-02 12:57:28.408 -08 000000102 INF: Y Motor: Recv ok\r
17-03-02 12:57:28.408 -08 000000102 INF: ======================================
17-03-02 12:57:28.446 -08 000000029 INF: FC:B, C:161,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:28.447 -08 000000073 INF: FC:B, C:161,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:28.447 -08 000000044 INF: FC:B, C:161,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:28.447 -08 000000138 INF: FC:B, C:161,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:28.468 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:28.468 -08 000000075 INF: FPGA: Recv ZDACW 
17-03-02 12:57:28.468 -08 000000086 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-03-02 12:57:28.469 -08 000000086 INF: FPGA: Xmit TDIBB 0\n
17-03-02 12:57:28.530 -08 000000088 INF: FPGA: Recv TDIBB
17-03-02 12:57:28.530 -08 000000086 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:57:28.531 -08 000000086 INF: ======================================
17-03-02 12:57:28.568 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-03-02 12:57:28.598 -08 000000073 INF: LFT found best fwhm score 2.000036 in 151 ms
17-03-02 12:57:28.598 -08 000000073 INF: LFT found good score at index 2045 with fwhm value 2.000036. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:3,T
17-03-02 12:57:28.598 -08 000000029 INF: LFT found best fwhm score 2.000773 in 152 ms
17-03-02 12:57:28.598 -08 000000029 INF: LFT found good score at index 5225 with fwhm value 2.000773. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:3,T
17-03-02 12:57:28.598 -08 000000073 INF: ===================LookupFocusTracking===================
17-03-02 12:57:28.598 -08 000000029 INF: ===================LookupFocusTracking===================
17-03-02 12:57:28.598 -08 000000073 INF: ======================================
17-03-02 12:57:28.598 -08 000000029 INF: ======================================
17-03-02 12:57:28.599 -08 000000138 INF: LFT found best fwhm score 2.000199 in 152 ms
17-03-02 12:57:28.599 -08 000000138 INF: LFT found good score at index 381 with fwhm value 2.000199. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:3,T
17-03-02 12:57:28.599 -08 000000138 INF: ===================LookupFocusTracking===================
17-03-02 12:57:28.599 -08 000000138 INF: ======================================
17-03-02 12:57:28.610 -08 000000044 INF: LFT found best fwhm score 2.283182 in 163 ms
17-03-02 12:57:28.610 -08 000000044 INF: LFT found good score at index 7201 with fwhm value 2.283182. Next cycle, cycle 162 starting Z position for top surface is at -0.157 mm FC:B, C:161,L:3,T
17-03-02 12:57:28.611 -08 000000044 INF: ===================LookupFocusTracking===================
17-03-02 12:57:28.611 -08 000000044 INF: ======================================
17-03-02 12:57:28.612 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:28.613 -08 000000033 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:161,L:3,T
17-03-02 12:57:28.614 -08 000000033 INF: ======================================
17-03-02 12:57:28.615 -08 000000116 INF: ======================================
17-03-02 12:57:28.616 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:57:28.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:57:28.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:57:28.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:57:28.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:28.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-03-02 12:57:28.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-03-02 12:57:28.619 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis===================
17-03-02 12:57:28.619 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:28.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Waiting for image analysis===================
17-03-02 12:57:28.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-03-02 12:57:28.643 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-03-02 12:57:28.643 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:28.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:28.643 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-03-02 12:57:28.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:28.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 3===================
17-03-02 12:57:28.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface===================
17-03-02 12:57:28.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:28.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:28.662 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:57:28.662 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:57:28.822 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1209 Request: {"Cycle":161,"Lane":3,"Tile":1209,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF216","HCSMMF269","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:28.830 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:57:28.830 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:28.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:28.833 -08 000000042 INF: Compensator: Moving OutOfPath
17-03-02 12:57:28.833 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-03-02 12:57:29.177 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:29.247 -08 000000108 INF: FPGA: Recv MIOCOMPR
17-03-02 12:57:29.247 -08 000000042 INF: Compensator: Moved OutOfPath in 414 ms
17-03-02 12:57:29.247 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543
17-03-02 12:57:29.248 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:29.249 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-03-02 12:57:29.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:29.249 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1210 Request: {"Cycle":161,"Lane":3,"Tile":1210,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF191","HCSMMF200","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.250 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:29.251 -08 000000004 INF: ===================Move Tilt Motor 2===================
17-03-02 12:57:29.251 -08 000000068 INF: ===================Move Tilt Motor 3===================
17-03-02 12:57:29.251 -08 000000128 INF: ===================Move Tilt Motor 1===================
17-03-02 12:57:29.251 -08 000000004 INF: ======================================
17-03-02 12:57:29.252 -08 000000068 INF: ======================================
17-03-02 12:57:29.252 -08 000000128 INF: ======================================
17-03-02 12:57:29.255 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:29.256 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:29.256 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1201 Request: {"Cycle":161,"Lane":3,"Tile":1201,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF281","HCSMMF263","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.260 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1205 Request: {"Cycle":161,"Lane":3,"Tile":1205,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF207","HCSMMF283","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.261 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1208 Request: {"Cycle":161,"Lane":3,"Tile":1208,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF271","HCSMMF214","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.263 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1212 Request: {"Cycle":161,"Lane":3,"Tile":1212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF199","HCSMMF184","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.264 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1211 Request: {"Cycle":161,"Lane":3,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF251","HCSMMF180","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.264 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1203 Request: {"Cycle":161,"Lane":3,"Tile":1203,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF264","HCSMMF235","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.265 -08 000000136 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1206 Request: {"Cycle":161,"Lane":3,"Tile":1206,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF237","HCSMMF286","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.266 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-03-02 12:57:29.267 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1202 Request: {"Cycle":161,"Lane":3,"Tile":1202,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF247","HCSMMF228","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.268 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1204 Request: {"Cycle":161,"Lane":3,"Tile":1204,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF197","HCSMMF193","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.268 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1207 Request: {"Cycle":161,"Lane":3,"Tile":1207,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF179","HCSMMF249","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.269 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1218 Request: {"Cycle":161,"Lane":3,"Tile":1218,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF212","HCSMMF227","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.270 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1213 Request: {"Cycle":161,"Lane":3,"Tile":1213,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF205","HCSMMF284","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.270 -08 000000133 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1214 Request: {"Cycle":161,"Lane":3,"Tile":1214,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF262","HCSMMF233","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.271 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1225 Request: {"Cycle":161,"Lane":3,"Tile":1225,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF182","HCSMMF202","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.272 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1216 Request: {"Cycle":161,"Lane":3,"Tile":1216,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF203","HCSMMF218","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.273 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1221 Request: {"Cycle":161,"Lane":3,"Tile":1221,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF208","HCSMMF211","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.274 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1219 Request: {"Cycle":161,"Lane":3,"Tile":1219,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF204","HCSMMF223","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.275 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-03-02 12:57:29.275 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-03-02 12:57:29.275 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-03-02 12:57:29.275 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1228 Request: {"Cycle":161,"Lane":3,"Tile":1228,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF268","HCSMMF273","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.275 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:29.276 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:29.276 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1222 Request: {"Cycle":161,"Lane":3,"Tile":1222,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF178","HCSMMF242","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.277 -08 000000112 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1215 Request: {"Cycle":161,"Lane":3,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF190","HCSMMF279","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.278 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1227 Request: {"Cycle":161,"Lane":3,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF236","HCSMMF215","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.279 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1220 Request: {"Cycle":161,"Lane":3,"Tile":1220,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF198","HCSMMF220","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.279 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-03-02 12:57:29.279 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-03-02 12:57:29.279 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-03-02 12:57:29.280 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1223 Request: {"Cycle":161,"Lane":3,"Tile":1223,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF257","HCSMMF274","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.281 -08 000000116 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1224 Request: {"Cycle":161,"Lane":3,"Tile":1224,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF270","HCSMMF258","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.282 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1226 Request: {"Cycle":161,"Lane":3,"Tile":1226,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF187","HCSMMF222","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.283 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 161 Tile: 1217 Request: {"Cycle":161,"Lane":3,"Tile":1217,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF201","HCSMMF267","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:29.294 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:29.300 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-03-02 12:57:29.309 -08 000000087 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:29.309 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:29.309 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:57:29.309 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1563 mm
17-03-02 12:57:29.310 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-03-02 12:57:29.348 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP9600R\r
17-03-02 12:57:29.370 -08 000000078 INF: FPGA: Recv ZTRG 
17-03-02 12:57:29.370 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-03-02 12:57:29.403 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:29.403 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-03-02 12:57:29.435 -08 000000128 INF: FPGA: Recv ZYT 
17-03-02 12:57:29.435 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:29.435 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-03-02 12:57:29.435 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-03-02 12:57:29.441 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:29.447 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-03-02 12:57:29.495 -08 000000053 INF: FPGA: Recv @LOG Trigger Camera
17-03-02 12:57:29.495 -08 000000053 INF: FPGA: Recv ZMV 
17-03-02 12:57:29.495 -08 000000006 INF: FPGA: Trigger Camera
17-03-02 12:57:29.495 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 59.9731 ms
17-03-02 12:57:29.495 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-03-02 12:57:29.535 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:29.535 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:29.541 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-03-02 12:57:29.560 -08 000000138 INF: FPGA: Recv ZDACR 60292
17-03-02 12:57:29.560 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:29.560 -08 000000042 INF: Z Motor: MoveAndTrigger took 250.3276 ms w/comms
17-03-02 12:57:29.560 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:57:29.560 -08 000000042 INF: Z Motor: MoveAbsStepped took 250.4957 ms
17-03-02 12:57:29.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:29.561 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-03-02 12:57:29.569 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-03-02 12:57:29.570 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:57:29.570 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:57:29.570 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-03-02 12:57:29.570 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-03-02 12:57:29.620 -08 000000058 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:29.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:29.631 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-03-02 12:57:29.634 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:29.640 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-03-02 12:57:29.642 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-03-02 12:57:29.642 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:57:29.642 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-03-02 12:57:29.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:29.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-03-02 12:57:29.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:29.645 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-03-02 12:57:29.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:29.646 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:29.647 -08 000000098 INF: ===================MoveEmissionFilters===================
17-03-02 12:57:29.647 -08 000000032 INF: ===================Move X,Y===================
17-03-02 12:57:29.648 -08 000000030 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:29.648 -08 000000032 INF: ===================Move X,Y, Parallel===================
17-03-02 12:57:29.648 -08 000000068 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:29.648 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:29.648 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:29.649 -08 000000030 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:29.649 -08 000000087 INF: ===================Move X Motor without settling===================
17-03-02 12:57:29.649 -08 000000053 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:29.649 -08 000000068 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:29.649 -08 000000087 INF: X Motor: Xmit PR VM\n
17-03-02 12:57:29.649 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:29.649 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:29.649 -08 000000053 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9217 mm
17-03-02 12:57:29.649 -08 000000053 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:29.649 -08 000000053 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:29.649 -08 000000009 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:57:29.650 -08 000000010 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:57:29.650 -08 000000010 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:57:29.650 -08 000000119 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:57:29.650 -08 000000065 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:57:29.650 -08 000000092 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:57:29.650 -08 000000009 INF: ======================================
17-03-02 12:57:29.650 -08 000000044 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:57:29.650 -08 000000106 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:57:29.650 -08 000000101 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:57:29.650 -08 000000119 INF: ======================================
17-03-02 12:57:29.651 -08 000000106 INF: ======================================
17-03-02 12:57:29.651 -08 000000044 INF: ======================================
17-03-02 12:57:29.651 -08 000000010 INF: ======================================
17-03-02 12:57:29.651 -08 000000092 INF: ======================================
17-03-02 12:57:29.651 -08 000000030 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:29.653 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:29.653 -08 000000030 INF: ======================================
17-03-02 12:57:29.653 -08 000000065 INF: ======================================
17-03-02 12:57:29.653 -08 000000101 INF: ======================================
17-03-02 12:57:29.654 -08 000000062 INF: ======================================
17-03-02 12:57:29.655 -08 000000068 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:29.655 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:29.656 -08 000000068 INF: ======================================
17-03-02 12:57:29.656 -08 000000091 INF: ======================================
17-03-02 12:57:29.657 -08 000000098 INF: ======================================
17-03-02 12:57:29.684 -08 000000087 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:57:29.684 -08 000000087 INF: X Motor: Xmit PR VI\n
17-03-02 12:57:29.717 -08 000000053 INF: Y Motor: Recv ok\r
17-03-02 12:57:29.717 -08 000000053 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:29.717 -08 000000053 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:29.730 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:29.748 -08 000000087 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:57:29.748 -08 000000087 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:57:29.748 -08 000000087 INF: X Motor: Moving to 77.4806 mm @15.000 mm/sec, started at 75.2476 mm
17-03-02 12:57:29.748 -08 000000087 INF: X Motor: Xmit MA 7570\n
17-03-02 12:57:29.778 -08 000000053 INF: Y Motor: Recv ok\r
17-03-02 12:57:29.778 -08 000000053 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:29.810 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:29.814 -08 000000087 INF: X Motor: Recv MA 7570\r\n>
17-03-02 12:57:29.814 -08 000000087 INF: X Motor: WaitUntilStopped 60149
17-03-02 12:57:29.840 -08 000000053 INF: Y Motor: Recv v 0\r
17-03-02 12:57:29.840 -08 000000053 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:29.840 -08 000000053 INF: Y Motor: Set target position to 5953351 encoder counts
17-03-02 12:57:29.840 -08 000000053 INF: Y Motor: Xmit s r0xca 5953351\r
17-03-02 12:57:29.870 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:29.902 -08 000000053 INF: Y Motor: Recv ok\r
17-03-02 12:57:29.902 -08 000000053 INF: Y Motor: Start the move command
17-03-02 12:57:29.902 -08 000000053 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:29.966 -08 000000053 INF: Y Motor: Recv ok\r
17-03-02 12:57:29.966 -08 000000053 INF: Y Motor: WaitUntilStopped 61984
17-03-02 12:57:29.966 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:30.017 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-03-02 12:57:30.091 -08 000000053 INF: Y Motor: Unshifted Position: 1074939
17-03-02 12:57:30.120 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:30.141 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:30.182 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:30.264 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:30.403 -08 000000053 INF: Y Motor: Unshifted Position: 1781324
17-03-02 12:57:30.432 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:30.434 -08 000000087 INF: X Motor: Xmit PR ER\n
17-03-02 12:57:30.453 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:30.494 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:30.495 -08 000000087 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:57:30.495 -08 000000087 INF: X Motor: Moved to 77.4814 after 681 ms
17-03-02 12:57:30.495 -08 000000087 INF: ======================================
17-03-02 12:57:30.576 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:30.714 -08 000000053 INF: Y Motor: Unshifted Position: 2562184
17-03-02 12:57:30.744 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:30.764 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:30.808 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:30.890 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:31.025 -08 000000053 INF: Y Motor: Unshifted Position: 3344637
17-03-02 12:57:31.058 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:31.075 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:31.119 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:31.200 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:31.340 -08 000000053 INF: Y Motor: Unshifted Position: 4123030
17-03-02 12:57:31.370 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:31.390 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:31.431 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:31.513 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:31.651 -08 000000053 INF: Y Motor: Unshifted Position: 4908814
17-03-02 12:57:31.681 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:31.701 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:31.746 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:31.826 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:31.964 -08 000000053 INF: Y Motor: Unshifted Position: 5682128
17-03-02 12:57:31.996 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:32.014 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:32.057 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:32.138 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:32.275 -08 000000053 INF: Y Motor: Unshifted Position: 5953353
17-03-02 12:57:32.275 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:32.275 -08 000000053 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:32.307 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:32.339 -08 000000053 INF: Y Motor: Recv v 0\r
17-03-02 12:57:32.339 -08 000000053 INF: Y Motor: Moved to 64.5335 after 2372 ms
17-03-02 12:57:32.339 -08 000000053 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:32.369 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:32.400 -08 000000053 INF: Y Motor: Recv v 4096\r
17-03-02 12:57:32.400 -08 000000053 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:32.400 -08 000000053 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:32.463 -08 000000053 INF: Y Motor: Recv v 0\r
17-03-02 12:57:32.463 -08 000000053 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:32.463 -08 000000053 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:32.524 -08 000000053 INF: Y Motor: Recv v 402653184\r
17-03-02 12:57:32.524 -08 000000053 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:57:32.524 -08 000000053 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:32.524 -08 000000053 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:32.587 -08 000000053 INF: Y Motor: Recv v 0\r
17-03-02 12:57:32.587 -08 000000053 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:32.587 -08 000000053 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:32.587 -08 000000053 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:32.619 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:32.651 -08 000000053 INF: Y Motor: Recv ok\r
17-03-02 12:57:32.651 -08 000000053 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:32.651 -08 000000053 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:32.681 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:32.711 -08 000000053 INF: Y Motor: Recv ok\r
17-03-02 12:57:32.711 -08 000000053 INF: ======================================
17-03-02 12:57:32.713 -08 000000032 INF: ===================Move X,Y===================
17-03-02 12:57:32.716 -08 000000032 INF: ======================================
17-03-02 12:57:32.719 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:32.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:32.720 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-03-02 12:57:32.720 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-03-02 12:57:32.775 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:57:32.775 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-03-02 12:57:32.804 -08 000000025 INF: FPGA: Recv ZFREQCL
17-03-02 12:57:32.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:57:32.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:32.805 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:32.867 -08 000000054 INF: FPGA: Recv TDIYERD 6453353
17-03-02 12:57:32.867 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-03-02 12:57:32.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:32.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:32.869 -08 000000083 INF: ===================Set YMotor gains for scans===================
17-03-02 12:57:32.869 -08 000000083 INF: ======================================
17-03-02 12:57:32.869 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:32.871 -08 000000081 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:57:32.871 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:32.873 -08 000000081 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:57:32.875 -08 000000081 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:57:32.875 -08 000000081 INF: FPGA: Xmit TDIYPOS 6433351\n
17-03-02 12:57:32.928 -08 000000010 INF: FPGA: Recv TDIYPOS
17-03-02 12:57:32.929 -08 000000081 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:57:32.930 -08 000000081 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:57:32.930 -08 000000081 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-03-02 12:57:32.931 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:32.992 -08 000000053 INF: FPGA: Recv TDIYARM2
17-03-02 12:57:32.992 -08 000000081 INF: ===================TDI Scan Setup, Arm FPGA===================
17-03-02 12:57:32.993 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:32.994 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:32.995 -08 000000081 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:57:32.995 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:32.997 -08 000000081 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-03-02 12:57:32.998 -08 000000081 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:57:32.998 -08 000000081 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:33.244 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:33.305 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:33.368 -08 000000081 INF: Camera #0 AttachBuffer (imageDataPtr = 69126516224 imgPtr = 69126516224 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-03-02 12:57:33.368 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-03-02 12:57:33.369 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:33.389 -08 000000081 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:57:33.391 -08 000000081 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:33.555 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:33.617 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:33.778 -08 000000081 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53833692544 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-03-02 12:57:33.778 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-03-02 12:57:33.778 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:33.793 -08 000000081 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-03-02 12:57:33.795 -08 000000081 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-03-02 12:57:33.796 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:33.798 -08 000000081 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:33.799 -08 000000081 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:57:33.799 -08 000000081 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:33.801 -08 000000081 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:57:33.801 -08 000000081 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:57:33.801 -08 000000081 INF: Z Motor: Arming to move to -0.0100 mm
17-03-02 12:57:33.801 -08 000000081 INF: FPGA: Xmit ZYT 0 2\n
17-03-02 12:57:33.864 -08 000000071 INF: FPGA: Recv ZYT 
17-03-02 12:57:33.864 -08 000000081 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-03-02 12:57:33.864 -08 000000081 INF: FPGA: Xmit ZARM 2621\n
17-03-02 12:57:33.867 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:33.926 -08 000000010 INF: FPGA: Recv ZARM
17-03-02 12:57:33.926 -08 000000081 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0557 ms
17-03-02 12:57:33.926 -08 000000081 INF: Z Motor: ArmAbsStepped took 125.1971 ms
17-03-02 12:57:33.926 -08 000000081 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:33.927 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:33.928 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:33.929 -08 000000081 INF: ======================================
17-03-02 12:57:33.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:33.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:33.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:33.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:33.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:33.933 -08 000000097 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:57:33.933 -08 000000054 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:57:33.933 -08 000000097 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:57:33.933 -08 000000097 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:57:33.933 -08 000000097 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:57:33.933 -08 000000054 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:57:33.933 -08 000000097 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:57:33.933 -08 000000054 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:57:33.933 -08 000000054 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:57:33.936 -08 000000054 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:57:34.177 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:34.241 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:34.365 -08 000000128 INF: FPGA: Recv EX2MV
17-03-02 12:57:34.365 -08 000000128 INF: FPGA: Recv EX1MV
17-03-02 12:57:34.365 -08 000000054 INF: Excitation Filter 1: Moved -107 steps in 431.4726 ms
17-03-02 12:57:34.365 -08 000000097 INF: Excitation Filter 2: Moved -107 steps in 431.6691 ms
17-03-02 12:57:34.365 -08 000000054 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 431.6414 ms
17-03-02 12:57:34.365 -08 000000054 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.7517 ms
17-03-02 12:57:34.365 -08 000000097 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 431.7699 ms
17-03-02 12:57:34.365 -08 000000097 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 431.9387 ms
17-03-02 12:57:34.365 -08 000000054 INF: ======================================
17-03-02 12:57:34.365 -08 000000097 INF: ======================================
17-03-02 12:57:34.367 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:34.368 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:34.369 -08 000000108 INF: ===================Serial===================
17-03-02 12:57:34.369 -08 000000071 INF: ===================Camera TDI===================
17-03-02 12:57:34.369 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:34.369 -08 000000105 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:34.369 -08 000000105 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-03-02 12:57:34.369 -08 000000105 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:34.370 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:34.370 -08 000000108 INF: ===================Serial, FPGA Z Wait===================
17-03-02 12:57:34.370 -08 000000071 INF: ===================Camera TDI, Parallel===================
17-03-02 12:57:34.370 -08 000000036 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:57:34.370 -08 000000108 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:57:34.371 -08 000000061 INF: ===================Camera TDI===================
17-03-02 12:57:34.371 -08 000000086 INF: ===================Camera TDI===================
17-03-02 12:57:34.371 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:34.371 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:34.372 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:34.372 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:34.378 -08 000000036 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:57:34.459 -08 000000105 INF: Y Motor: Recv ok\r
17-03-02 12:57:34.459 -08 000000105 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:34.459 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:34.491 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:34.522 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:34.522 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:34.523 -08 000000105 INF: Y Motor: Recv ok\r
17-03-02 12:57:34.523 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:34.523 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:34.523 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:34.553 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:34.584 -08 000000105 INF: Y Motor: Recv v 0\r
17-03-02 12:57:34.584 -08 000000105 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:34.584 -08 000000105 INF: Y Motor: Set target position to 5797042 encoder counts
17-03-02 12:57:34.584 -08 000000105 INF: Y Motor: Xmit s r0xca 5797042\r
17-03-02 12:57:34.647 -08 000000105 INF: Y Motor: Recv ok\r
17-03-02 12:57:34.647 -08 000000105 INF: Y Motor: Start the move command
17-03-02 12:57:34.647 -08 000000105 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:34.672 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:34.672 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:34.673 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:34.673 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:34.709 -08 000000105 INF: Y Motor: Recv ok\r
17-03-02 12:57:34.709 -08 000000105 INF: Y Motor: WaitUntilStopped 61042
17-03-02 12:57:34.709 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:34.803 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:34.822 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:34.822 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:34.823 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:34.823 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:34.834 -08 000000105 INF: Y Motor: Unshifted Position: 5935036
17-03-02 12:57:34.866 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:34.884 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:34.972 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-03-02 12:57:34.972 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-03-02 12:57:34.972 -08 000000061 INF: ===================Camera #0 Frame #1===================
17-03-02 12:57:34.973 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-03-02 12:57:34.973 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-03-02 12:57:34.973 -08 000000086 INF: ===================Camera #2 Frame #1===================
17-03-02 12:57:35.007 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:35.116 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:35.126 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-03-02 12:57:35.126 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-03-02 12:57:35.126 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-03-02 12:57:35.126 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-03-02 12:57:35.126 -08 000000086 INF: ===================Camera #2 Frame #2===================
17-03-02 12:57:35.126 -08 000000061 INF: ===================Camera #0 Frame #2===================
17-03-02 12:57:35.147 -08 000000105 INF: Y Motor: Unshifted Position: 5888532
17-03-02 12:57:35.177 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:35.197 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:35.279 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:57:35.279 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:57:35.279 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:57:35.279 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-03-02 12:57:35.279 -08 000000061 INF: ===================Camera #0 Frame #4===================
17-03-02 12:57:35.279 -08 000000086 INF: ===================Camera #2 Frame #4===================
17-03-02 12:57:35.319 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:35.427 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:35.435 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:35.435 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:35.435 -08 000000061 INF: ===================Camera #0 Frame #5===================
17-03-02 12:57:35.436 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:35.436 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:35.436 -08 000000086 INF: ===================Camera #2 Frame #5===================
17-03-02 12:57:35.459 -08 000000105 INF: Y Motor: Unshifted Position: 5841672
17-03-02 12:57:35.487 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:35.509 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:35.550 -08 000000051 INF: FPGA: Recv ZWAIT 
17-03-02 12:57:35.550 -08 000000051 INF: FPGA: Recv TDIYWAIT
17-03-02 12:57:35.550 -08 000000108 INF: ===================Serial===================
17-03-02 12:57:35.550 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:35.552 -08 000000108 INF: ===================Serial, Confirm position Z Motor===================
17-03-02 12:57:35.552 -08 000000036 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:57:35.552 -08 000000108 INF: ===================Serial===================
17-03-02 12:57:35.553 -08 000000128 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:57:35.553 -08 000000004 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:57:35.553 -08 000000128 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:57:35.553 -08 000000108 INF: ======================================
17-03-02 12:57:35.554 -08 000000128 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:57:35.554 -08 000000128 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:57:35.554 -08 000000128 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:57:35.554 -08 000000004 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:57:35.554 -08 000000004 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:57:35.554 -08 000000004 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:57:35.555 -08 000000004 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:57:35.588 -08 000000061 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-03-02 12:57:35.588 -08 000000061 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-03-02 12:57:35.588 -08 000000061 INF: ===================Camera #0 Frame #6===================
17-03-02 12:57:35.589 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-03-02 12:57:35.589 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-03-02 12:57:35.589 -08 000000086 INF: ===================Camera #2 Frame #6===================
17-03-02 12:57:35.591 -08 000000061 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-03-02 12:57:35.592 -08 000000061 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:35.592 -08 000000086 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-03-02 12:57:35.593 -08 000000086 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:35.615 -08 000000061 INF: Camera #0 ReleaseBuffer
17-03-02 12:57:35.615 -08 000000061 INF: ===================Camera TDI===================
17-03-02 12:57:35.616 -08 000000061 INF: ======================================
17-03-02 12:57:35.632 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:35.639 -08 000000086 INF: Camera #2 ReleaseBuffer
17-03-02 12:57:35.639 -08 000000086 INF: ===================Camera TDI===================
17-03-02 12:57:35.640 -08 000000086 INF: ======================================
17-03-02 12:57:35.642 -08 000000071 INF: ===================Camera TDI===================
17-03-02 12:57:35.643 -08 000000071 INF: ======================================
17-03-02 12:57:35.737 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:35.769 -08 000000105 INF: Y Motor: Unshifted Position: 5797063
17-03-02 12:57:35.799 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:35.819 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:35.923 -08 000000068 INF: FPGA: Recv EX2MV
17-03-02 12:57:35.923 -08 000000068 INF: FPGA: Recv EX1MV
17-03-02 12:57:35.923 -08 000000004 INF: Excitation Filter 1: Moved 107 steps in 369.3892 ms
17-03-02 12:57:35.923 -08 000000004 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.5017 ms
17-03-02 12:57:35.923 -08 000000004 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.5884 ms
17-03-02 12:57:35.923 -08 000000128 INF: Excitation Filter 2: Moved 107 steps in 369.6199 ms
17-03-02 12:57:35.923 -08 000000128 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.8982 ms
17-03-02 12:57:35.923 -08 000000128 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.9705 ms
17-03-02 12:57:35.924 -08 000000004 INF: ======================================
17-03-02 12:57:35.924 -08 000000128 INF: ======================================
17-03-02 12:57:35.925 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:35.926 -08 000000036 INF: ======================================
17-03-02 12:57:35.956 -08 000000105 INF: Y Motor: Unshifted Position: 5797042
17-03-02 12:57:35.956 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:35.956 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:36.020 -08 000000105 INF: Y Motor: Recv v 0\r
17-03-02 12:57:36.020 -08 000000105 INF: Y Motor: Moved to 62.9704 after 1311 ms
17-03-02 12:57:36.020 -08 000000105 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:36.049 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:36.081 -08 000000105 INF: Y Motor: Recv v 4097\r
17-03-02 12:57:36.081 -08 000000105 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:36.081 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:36.111 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:36.145 -08 000000105 INF: Y Motor: Recv v 0\r
17-03-02 12:57:36.145 -08 000000105 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:36.145 -08 000000105 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:36.206 -08 000000105 INF: Y Motor: Recv v 134217728\r
17-03-02 12:57:36.206 -08 000000105 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:57:36.206 -08 000000105 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:36.206 -08 000000105 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:36.268 -08 000000105 INF: Y Motor: Recv v 0\r
17-03-02 12:57:36.268 -08 000000105 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:36.268 -08 000000105 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:36.268 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:36.332 -08 000000105 INF: Y Motor: Recv ok\r
17-03-02 12:57:36.332 -08 000000105 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:36.332 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:36.361 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:36.395 -08 000000105 INF: Y Motor: Recv ok\r
17-03-02 12:57:36.395 -08 000000105 INF: ======================================
17-03-02 12:57:36.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:36.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-03-02 12:57:36.398 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.398 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:57:36.424 -08 000000044 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:57:36.424 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:36.425 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:36.485 -08 000000032 INF: FPGA: Recv TDIYERD 6297043
17-03-02 12:57:36.485 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:57:36.549 -08 000000112 INF: FPGA: Recv ZADCR 2427
17-03-02 12:57:36.549 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-03-02 12:57:36.549 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:57:36.610 -08 000000071 INF: FPGA: Recv TDIPULSES 3073
17-03-02 12:57:36.610 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-03-02 12:57:36.610 -08 000000042 INF: TDIScan finished after 6978.4153 ms
17-03-02 12:57:36.610 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-03-02 12:57:36.610 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-03-02 12:57:36.610 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:57:36.672 -08 000000136 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:57:36.673 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.674 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.674 -08 000000133 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:57:36.675 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:36.675 -08 000000138 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:57:36.675 -08 000000095 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:57:36.675 -08 000000138 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:57:36.675 -08 000000138 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:57:36.675 -08 000000133 INF: ======================================
17-03-02 12:57:36.675 -08 000000095 INF: ======================================
17-03-02 12:57:36.737 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:36.768 -08 000000138 INF: Y Motor: Recv ok\r
17-03-02 12:57:36.768 -08 000000138 INF: ======================================
17-03-02 12:57:36.769 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:57:36.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:57:36.859 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.859 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:57:36.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:57:36.914 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-03-02 12:57:36.915 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:36.915 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:36.916 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-03-02 12:57:36.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:36.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-03-02 12:57:36.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-03-02 12:57:36.987 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:37.049 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:37.299 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:37.361 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:37.611 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:37.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-03-02 12:57:37.635 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0880656036908413Best Z position at top surface = -0.159654237116277Best Z position at top surface + compensator offset = -0.136954237116277 C:161,L:4,T
17-03-02 12:57:37.636 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159654237116277
17-03-02 12:57:37.636 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97521
17-03-02 12:57:37.636 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0880656036908413
17-03-02 12:57:37.636 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63056
17-03-02 12:57:37.636 -08 000000042 INF: Z-height at LaneTopSurface is -0.159654237116277.
17-03-02 12:57:37.636 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:37.672 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:37.771 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:57:37.771 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:57:37.796 -08 000000053 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:37.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-03-02 12:57:37.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:37.798 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543
17-03-02 12:57:37.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:37.799 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:37.799 -08 000000029 INF: ===================Move Tilt Motor 1===================
17-03-02 12:57:37.800 -08 000000062 INF: ===================Move Tilt Motor 3===================
17-03-02 12:57:37.800 -08 000000105 INF: ===================Move Tilt Motor 2===================
17-03-02 12:57:37.800 -08 000000029 INF: ======================================
17-03-02 12:57:37.800 -08 000000105 INF: ======================================
17-03-02 12:57:37.801 -08 000000062 INF: ======================================
17-03-02 12:57:37.802 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:37.803 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:37.803 -08 000000042 INF: ETF Best Z: -0.1369542 mm (35901 DAC)
17-03-02 12:57:37.803 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:37.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:37.805 -08 000000042 INF: Compensator: Moving IntoPath
17-03-02 12:57:37.805 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-03-02 12:57:38.354 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:38.355 -08 000000025 INF: FPGA: Recv MIOCOMPF
17-03-02 12:57:38.355 -08 000000042 INF: Compensator: Moved IntoPath in 551 ms
17-03-02 12:57:38.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:38.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:38.363 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92664, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-03-02 12:57:38.363 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03464, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-03-02 12:57:38.369 -08 000000042 INF: Swath 0: Converted transform from (-42.20025, 49.27605) pixels to (-0.01449, 0.016905) mm.
17-03-02 12:57:38.375 -08 000000042 INF: Swath 1: Converted transform from (-72.78454, 49.49926) pixels to (-0.025185, 0.016905) mm.
17-03-02 12:57:38.375 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-03-02 12:57:38.375 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-03-02 12:57:38.376 -08 000000042 INF: Transformed XStagePosition from 76.92664 mm to 76.9121457422152 mm.
17-03-02 12:57:38.387 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5699943559021 mm.
17-03-02 12:57:38.387 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3699943559021 mm.
17-03-02 12:57:38.387 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4607443559021 mm.
17-03-02 12:57:38.389 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:38.389 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-03-02 12:57:38.390 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:38.390 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-03-02 12:57:38.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:38.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:38.396 -08 000000110 INF: ===================MoveEmissionFilters===================
17-03-02 12:57:38.396 -08 000000032 INF: ===================Move X,Y===================
17-03-02 12:57:38.396 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:38.397 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:38.397 -08 000000032 INF: ===================Move X,Y, Parallel===================
17-03-02 12:57:38.397 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:38.397 -08 000000071 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:38.397 -08 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:38.397 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-03-02 12:57:38.398 -08 000000123 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:57:38.398 -08 000000123 INF: Z Motor: Moving to -0.1570 mm, started at -0.0100 mm
17-03-02 12:57:38.398 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:38.398 -08 000000123 INF: FPGA: Xmit ZTRG 0\n
17-03-02 12:57:38.398 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:38.398 -08 000000071 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:38.398 -08 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:38.399 -08 000000081 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:57:38.399 -08 000000119 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:57:38.399 -08 000000068 INF: ===================Move X Motor without settling===================
17-03-02 12:57:38.399 -08 000000061 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:38.399 -08 000000095 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:57:38.399 -08 000000053 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:57:38.399 -08 000000068 INF: X Motor: Xmit PR VM\n
17-03-02 12:57:38.399 -08 000000029 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:57:38.399 -08 000000095 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:57:38.399 -08 000000092 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:57:38.400 -08 000000119 INF: ======================================
17-03-02 12:57:38.400 -08 000000029 INF: ======================================
17-03-02 12:57:38.400 -08 000000054 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:57:38.400 -08 000000092 INF: ======================================
17-03-02 12:57:38.400 -08 000000091 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:57:38.400 -08 000000061 INF: Y Motor: Moving to 64.5700 mm @25.000 mm/sec, started at 62.9704 mm
17-03-02 12:57:38.400 -08 000000081 INF: ======================================
17-03-02 12:57:38.400 -08 000000061 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:38.400 -08 000000061 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:38.400 -08 000000053 INF: ======================================
17-03-02 12:57:38.401 -08 000000091 INF: ======================================
17-03-02 12:57:38.401 -08 000000054 INF: ======================================
17-03-02 12:57:38.402 -08 000000071 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:38.402 -08 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:38.402 -08 000000095 INF: ======================================
17-03-02 12:57:38.402 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:38.403 -08 000000071 INF: ======================================
17-03-02 12:57:38.403 -08 000000078 INF: ======================================
17-03-02 12:57:38.404 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:38.404 -08 000000010 INF: ======================================
17-03-02 12:57:38.405 -08 000000108 INF: ======================================
17-03-02 12:57:38.406 -08 000000110 INF: ======================================
17-03-02 12:57:38.420 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:38.465 -08 000000119 INF: FPGA: Recv ZTRG 
17-03-02 12:57:38.465 -08 000000123 INF: FPGA: Xmit ZYT 0 3\n
17-03-02 12:57:38.467 -08 000000068 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:57:38.467 -08 000000068 INF: X Motor: Xmit PR VI\n
17-03-02 12:57:38.469 -08 000000061 INF: Y Motor: Recv ok\r
17-03-02 12:57:38.469 -08 000000061 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:38.469 -08 000000061 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:38.529 -08 000000128 INF: FPGA: Recv ZYT 
17-03-02 12:57:38.529 -08 000000123 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-03-02 12:57:38.529 -08 000000123 INF: FPGA: Xmit ZMV 41144\n
17-03-02 12:57:38.531 -08 000000061 INF: Y Motor: Recv ok\r
17-03-02 12:57:38.531 -08 000000061 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:38.531 -08 000000068 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:57:38.531 -08 000000068 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:57:38.531 -08 000000068 INF: X Motor: Moving to 76.9121 mm @15.000 mm/sec, started at 77.4814 mm
17-03-02 12:57:38.531 -08 000000068 INF: X Motor: Xmit MA 7337\n
17-03-02 12:57:38.593 -08 000000029 INF: FPGA: Recv @LOG Trigger Camera
17-03-02 12:57:38.593 -08 000000006 INF: FPGA: Trigger Camera
17-03-02 12:57:38.594 -08 000000061 INF: Y Motor: Recv v 0\r
17-03-02 12:57:38.594 -08 000000061 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:38.594 -08 000000068 INF: X Motor: Recv MA 7337\r\n>
17-03-02 12:57:38.594 -08 000000061 INF: Y Motor: Set target position to 5956999 encoder counts
17-03-02 12:57:38.594 -08 000000061 INF: Y Motor: Xmit s r0xca 5956999\r
17-03-02 12:57:38.594 -08 000000068 INF: X Motor: WaitUntilStopped 60038
17-03-02 12:57:38.655 -08 000000061 INF: Y Motor: Recv ok\r
17-03-02 12:57:38.655 -08 000000061 INF: Y Motor: Start the move command
17-03-02 12:57:38.655 -08 000000061 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:38.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:38.715 -08 000000054 INF: FPGA: Recv ZMV 
17-03-02 12:57:38.715 -08 000000123 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.8796 ms
17-03-02 12:57:38.715 -08 000000123 INF: FPGA: Xmit ZDACR\n
17-03-02 12:57:38.717 -08 000000061 INF: Y Motor: Recv ok\r
17-03-02 12:57:38.717 -08 000000061 INF: Y Motor: WaitUntilStopped 60064
17-03-02 12:57:38.717 -08 000000061 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:38.731 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:38.777 -08 000000138 INF: FPGA: Recv ZDACR 41144
17-03-02 12:57:38.777 -08 000000123 INF: Z Motor: MoveAndTrigger took 379.1572 ms w/comms
17-03-02 12:57:38.777 -08 000000123 INF: Z Motor: After move to -0.1570, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-03-02 12:57:38.777 -08 000000123 INF: Z Motor: MoveAbsStepped took 379.3351 ms
17-03-02 12:57:38.777 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:38.779 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-03-02 12:57:38.780 -08 000000119 INF: ===================Camera Arm TDI===================
17-03-02 12:57:38.780 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:38.781 -08 000000119 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:38.781 -08 000000081 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:38.781 -08 000000119 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:38.782 -08 000000081 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:57:38.783 -08 000000081 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:38.784 -08 000000081 INF: FPGA: Xmit ZSEL 3\n
17-03-02 12:57:38.841 -08 000000074 INF: FPGA: Recv ZSEL 
17-03-02 12:57:38.842 -08 000000081 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:38.842 -08 000000081 INF: FPGA: Xmit TDIBB 1\n
17-03-02 12:57:38.843 -08 000000061 INF: Y Motor: Unshifted Position: 5878126
17-03-02 12:57:38.893 -08 000000061 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:38.902 -08 000000010 INF: FPGA: Recv TDIBB
17-03-02 12:57:38.902 -08 000000081 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:38.903 -08 000000081 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:57:38.904 -08 000000081 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:38.906 -08 000000081 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-03-02 12:57:38.906 -08 000000081 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-03-02 12:57:38.906 -08 000000081 INF: FPGA: Xmit ZSTEP 1792263\n
17-03-02 12:57:38.966 -08 000000086 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:38.966 -08 000000081 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:38.968 -08 000000081 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:57:38.968 -08 000000081 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:38.970 -08 000000081 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:57:38.970 -08 000000081 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:57:38.970 -08 000000081 INF: Z Motor: Arming to move to -0.1170 mm
17-03-02 12:57:38.970 -08 000000081 INF: FPGA: Xmit ZYT 6436999 4\n
17-03-02 12:57:38.981 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:39.018 -08 000000061 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:39.027 -08 000000009 INF: FPGA: Recv ZYT 
17-03-02 12:57:39.027 -08 000000081 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378126 enc / 63.781 mm / ) = 6436999 enc / 64.370 mm
17-03-02 12:57:39.027 -08 000000081 INF: FPGA: Xmit ZARM 30658\n
17-03-02 12:57:39.029 -08 000000068 INF: X Motor: Xmit PR ER\n
17-03-02 12:57:39.043 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:39.089 -08 000000105 INF: FPGA: Recv ZARM
17-03-02 12:57:39.089 -08 000000081 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0081 ms
17-03-02 12:57:39.089 -08 000000081 INF: Z Motor: ArmAbsStepped took 118.8114 ms
17-03-02 12:57:39.089 -08 000000081 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:39.090 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:39.091 -08 000000068 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:57:39.091 -08 000000068 INF: X Motor: Moved to 76.9126 after 496 ms
17-03-02 12:57:39.091 -08 000000068 INF: ======================================
17-03-02 12:57:39.092 -08 000000081 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:57:39.092 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:39.094 -08 000000081 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:57:39.094 -08 000000081 INF: ===================TDI Scan Setup===================
17-03-02 12:57:39.096 -08 000000081 INF: ======================================
17-03-02 12:57:39.155 -08 000000061 INF: Y Motor: Unshifted Position: 5957001
17-03-02 12:57:39.155 -08 000000061 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:39.155 -08 000000061 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:39.217 -08 000000061 INF: Y Motor: Recv v 0\r
17-03-02 12:57:39.217 -08 000000061 INF: Y Motor: Moved to 64.5700 after 500 ms
17-03-02 12:57:39.217 -08 000000061 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:39.278 -08 000000061 INF: Y Motor: Recv v 4096\r
17-03-02 12:57:39.278 -08 000000061 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:39.278 -08 000000061 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:39.293 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:39.343 -08 000000061 INF: Y Motor: Recv v 0\r
17-03-02 12:57:39.343 -08 000000061 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:39.343 -08 000000061 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:39.355 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:39.403 -08 000000061 INF: Y Motor: Recv v 402653184\r
17-03-02 12:57:39.403 -08 000000061 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:57:39.403 -08 000000061 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:39.403 -08 000000061 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:39.467 -08 000000061 INF: Y Motor: Recv v 0\r
17-03-02 12:57:39.467 -08 000000061 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:39.467 -08 000000061 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:39.467 -08 000000061 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:39.529 -08 000000061 INF: Y Motor: Recv ok\r
17-03-02 12:57:39.529 -08 000000061 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:39.529 -08 000000061 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:39.590 -08 000000061 INF: Y Motor: Recv ok\r
17-03-02 12:57:39.590 -08 000000061 INF: ======================================
17-03-02 12:57:39.591 -08 000000032 INF: ===================Move X,Y===================
17-03-02 12:57:39.592 -08 000000032 INF: ======================================
17-03-02 12:57:39.605 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:39.669 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:39.750 -08 000000119 INF: Camera #0 AttachBuffer (imageDataPtr = 56927391792 imgPtr = 56927391792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:57:39.750 -08 000000119 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:57:39.750 -08 000000119 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:39.766 -08 000000119 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:39.768 -08 000000119 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:39.919 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:39.979 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:40.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:40.292 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:40.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:40.603 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:40.772 -08 000000119 INF: Camera #2 AttachBuffer (imageDataPtr = 64223121456 imgPtr = 65129091120 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:57:40.772 -08 000000119 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:57:40.772 -08 000000119 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:40.787 -08 000000119 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:40.789 -08 000000119 INF: ===================Camera Arm TDI===================
17-03-02 12:57:40.790 -08 000000119 INF: ======================================
17-03-02 12:57:40.791 -08 000000123 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:40.792 -08 000000123 INF: ======================================
17-03-02 12:57:40.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:40.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:40.794 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-03-02 12:57:40.794 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-03-02 12:57:40.840 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:57:40.840 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-03-02 12:57:40.853 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:40.901 -08 000000062 INF: FPGA: Recv ZFREQCL
17-03-02 12:57:40.901 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:57:40.901 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:40.902 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:40.917 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:40.963 -08 000000138 INF: FPGA: Recv TDIYERD 6457000
17-03-02 12:57:40.963 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457000 counts (64.570 mm)
17-03-02 12:57:40.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:40.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:40.964 -08 000000033 INF: ===================TDI FPGA Arm===================
17-03-02 12:57:40.964 -08 000000112 INF: ===================Set YMotor gains for scans===================
17-03-02 12:57:40.965 -08 000000112 INF: ======================================
17-03-02 12:57:40.965 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:40.966 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:57:40.966 -08 000000033 INF: FPGA: Xmit TDIYPOS 6346074\n
17-03-02 12:57:41.024 -08 000000086 INF: FPGA: Recv TDIYPOS
17-03-02 12:57:41.024 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:41.025 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:57:41.026 -08 000000033 INF: FPGA: Xmit TDIYARM3 139264 6436999 1 1\n
17-03-02 12:57:41.089 -08 000000092 INF: FPGA: Recv TDIYARM3
17-03-02 12:57:41.089 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:41.090 -08 000000033 INF: ===================TDI FPGA Arm===================
17-03-02 12:57:41.091 -08 000000033 INF: ======================================
17-03-02 12:57:41.092 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:41.093 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:41.093 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:41.094 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:41.094 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:41.095 -08 000000112 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:57:41.095 -08 000000075 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:57:41.095 -08 000000112 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:57:41.095 -08 000000112 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:57:41.095 -08 000000112 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:57:41.095 -08 000000075 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:57:41.096 -08 000000075 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:57:41.096 -08 000000075 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:57:41.096 -08 000000112 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:57:41.098 -08 000000075 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:57:41.167 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:41.227 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:41.370 -08 000000088 INF: RunCopyService queue size at 3/2/2017 12:57:41 PM is 0
17-03-02 12:57:41.463 -08 000000010 INF: FPGA: Recv EX2MV
17-03-02 12:57:41.463 -08 000000010 INF: FPGA: Recv EX1MV
17-03-02 12:57:41.463 -08 000000112 INF: Excitation Filter 2: Moved -107 steps in 366.3098 ms
17-03-02 12:57:41.463 -08 000000075 INF: Excitation Filter 1: Moved -107 steps in 366.2122 ms
17-03-02 12:57:41.463 -08 000000112 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.4106 ms
17-03-02 12:57:41.463 -08 000000075 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.3372 ms
17-03-02 12:57:41.463 -08 000000075 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.4786 ms
17-03-02 12:57:41.463 -08 000000112 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.5185 ms
17-03-02 12:57:41.463 -08 000000075 INF: ======================================
17-03-02 12:57:41.463 -08 000000112 INF: ======================================
17-03-02 12:57:41.464 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:41.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:41.466 -08 000000068 INF: ===================Camera TDI===================
17-03-02 12:57:41.466 -08 000000071 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:41.466 -08 000000110 INF: ===================FPGA Z Wait===================
17-03-02 12:57:41.467 -08 000000117 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:41.467 -08 000000110 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:57:41.467 -08 000000117 INF: Y Motor: Moving to 14.9217 mm @6.500 mm/sec, started at 64.5700 mm
17-03-02 12:57:41.467 -08 000000117 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:41.467 -08 000000117 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:41.467 -08 000000068 INF: ===================Camera TDI, Parallel===================
17-03-02 12:57:41.467 -08 000000071 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:57:41.468 -08 000000071 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:57:41.468 -08 000000138 INF: ===================Camera TDI===================
17-03-02 12:57:41.468 -08 000000009 INF: ===================Camera TDI===================
17-03-02 12:57:41.469 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:41.469 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:41.470 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:41.470 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:41.478 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:41.527 -08 000000117 INF: Y Motor: Recv ok\r
17-03-02 12:57:41.527 -08 000000117 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:41.527 -08 000000117 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:41.541 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:41.589 -08 000000117 INF: Y Motor: Recv ok\r
17-03-02 12:57:41.589 -08 000000117 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:41.619 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:41.619 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:41.620 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:41.620 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:41.650 -08 000000117 INF: Y Motor: Recv v 0\r
17-03-02 12:57:41.650 -08 000000117 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:41.650 -08 000000117 INF: Y Motor: Set target position to 992166 encoder counts
17-03-02 12:57:41.650 -08 000000117 INF: Y Motor: Xmit s r0xca 992166\r
17-03-02 12:57:41.715 -08 000000117 INF: Y Motor: Recv ok\r
17-03-02 12:57:41.715 -08 000000117 INF: Y Motor: Start the move command
17-03-02 12:57:41.715 -08 000000117 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:41.769 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:41.769 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:41.770 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:41.770 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:41.776 -08 000000117 INF: Y Motor: Recv ok\r
17-03-02 12:57:41.776 -08 000000117 INF: Y Motor: WaitUntilStopped 67638
17-03-02 12:57:41.776 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:41.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:41.836 -08 000000112 INF: FPGA: Recv ZWAIT 
17-03-02 12:57:41.836 -08 000000110 INF: ======================================
17-03-02 12:57:41.852 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:41.900 -08 000000117 INF: Y Motor: Unshifted Position: 5895577
17-03-02 12:57:41.919 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-03-02 12:57:41.919 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:41.919 -08 000000138 INF: ===================Camera #0 Frame #5===================
17-03-02 12:57:41.920 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:41.920 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:41.920 -08 000000009 INF: ===================Camera #2 Frame #5===================
17-03-02 12:57:41.950 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:42.077 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:42.084 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:57:42.084 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:57:42.084 -08 000000138 INF: ===================Camera #0 Frame #11===================
17-03-02 12:57:42.086 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:57:42.086 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:57:42.086 -08 000000009 INF: ===================Camera #2 Frame #11===================
17-03-02 12:57:42.102 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:42.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:42.214 -08 000000117 INF: Y Motor: Unshifted Position: 5692780
17-03-02 12:57:42.252 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:57:42.252 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:57:42.252 -08 000000138 INF: ===================Camera #0 Frame #17===================
17-03-02 12:57:42.255 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:57:42.255 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:57:42.255 -08 000000009 INF: ===================Camera #2 Frame #17===================
17-03-02 12:57:42.264 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:42.390 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:42.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:42.420 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:57:42.420 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:57:42.420 -08 000000138 INF: ===================Camera #0 Frame #23===================
17-03-02 12:57:42.424 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-03-02 12:57:42.424 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-03-02 12:57:42.424 -08 000000009 INF: ===================Camera #2 Frame #23===================
17-03-02 12:57:42.478 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:42.524 -08 000000117 INF: Y Motor: Unshifted Position: 5488687
17-03-02 12:57:42.574 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:42.588 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:57:42.588 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:57:42.588 -08 000000138 INF: ===================Camera #0 Frame #29===================
17-03-02 12:57:42.593 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-03-02 12:57:42.593 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-03-02 12:57:42.593 -08 000000009 INF: ===================Camera #2 Frame #29===================
17-03-02 12:57:42.700 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:42.728 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:42.756 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-03-02 12:57:42.756 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-03-02 12:57:42.756 -08 000000138 INF: ===================Camera #0 Frame #35===================
17-03-02 12:57:42.762 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:57:42.762 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:57:42.762 -08 000000009 INF: ===================Camera #2 Frame #36===================
17-03-02 12:57:42.790 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:42.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:42.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:42.791 -08 000000018 INF: WaitCommand(5000) start
17-03-02 12:57:42.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-03-02 12:57:42.837 -08 000000117 INF: Y Motor: Unshifted Position: 5285660
17-03-02 12:57:42.887 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:42.924 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-03-02 12:57:42.924 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-03-02 12:57:42.924 -08 000000138 INF: ===================Camera #0 Frame #41===================
17-03-02 12:57:42.935 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-03-02 12:57:42.935 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-03-02 12:57:42.935 -08 000000009 INF: ===================Camera #2 Frame #42===================
17-03-02 12:57:43.013 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:43.093 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:57:43.093 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:57:43.093 -08 000000138 INF: ===================Camera #0 Frame #48===================
17-03-02 12:57:43.105 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-03-02 12:57:43.105 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-03-02 12:57:43.105 -08 000000009 INF: ===================Camera #2 Frame #48===================
17-03-02 12:57:43.148 -08 000000117 INF: Y Motor: Unshifted Position: 5083947
17-03-02 12:57:43.198 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:43.265 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:57:43.265 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:57:43.265 -08 000000138 INF: ===================Camera #0 Frame #54===================
17-03-02 12:57:43.275 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-03-02 12:57:43.275 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-03-02 12:57:43.275 -08 000000009 INF: ===================Camera #2 Frame #54===================
17-03-02 12:57:43.324 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:43.434 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-03-02 12:57:43.434 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-03-02 12:57:43.434 -08 000000138 INF: ===================Camera #0 Frame #60===================
17-03-02 12:57:43.445 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:57:43.445 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:57:43.445 -08 000000009 INF: ===================Camera #2 Frame #61===================
17-03-02 12:57:43.460 -08 000000117 INF: Y Motor: Unshifted Position: 4878550
17-03-02 12:57:43.510 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:43.603 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-03-02 12:57:43.603 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-03-02 12:57:43.603 -08 000000138 INF: ===================Camera #0 Frame #66===================
17-03-02 12:57:43.618 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-03-02 12:57:43.618 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-03-02 12:57:43.618 -08 000000009 INF: ===================Camera #2 Frame #67===================
17-03-02 12:57:43.636 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:43.772 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:57:43.772 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:57:43.772 -08 000000138 INF: ===================Camera #0 Frame #73===================
17-03-02 12:57:43.774 -08 000000117 INF: Y Motor: Unshifted Position: 4676827
17-03-02 12:57:43.788 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-03-02 12:57:43.788 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-03-02 12:57:43.788 -08 000000009 INF: ===================Camera #2 Frame #73===================
17-03-02 12:57:43.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:43.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-03-02 12:57:43.824 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:43.944 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-03-02 12:57:43.944 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-03-02 12:57:43.944 -08 000000138 INF: ===================Camera #0 Frame #79===================
17-03-02 12:57:43.948 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:43.958 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-03-02 12:57:43.958 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-03-02 12:57:43.958 -08 000000009 INF: ===================Camera #2 Frame #80===================
17-03-02 12:57:44.085 -08 000000117 INF: Y Motor: Unshifted Position: 4474020
17-03-02 12:57:44.113 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-03-02 12:57:44.113 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-03-02 12:57:44.113 -08 000000138 INF: ===================Camera #0 Frame #85===================
17-03-02 12:57:44.132 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-03-02 12:57:44.132 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-03-02 12:57:44.132 -08 000000009 INF: ===================Camera #2 Frame #86===================
17-03-02 12:57:44.135 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:44.261 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:44.283 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:57:44.283 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:57:44.283 -08 000000138 INF: ===================Camera #0 Frame #92===================
17-03-02 12:57:44.302 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:57:44.302 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:57:44.302 -08 000000009 INF: ===================Camera #2 Frame #92===================
17-03-02 12:57:44.396 -08 000000117 INF: Y Motor: Unshifted Position: 4272305
17-03-02 12:57:44.446 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:44.456 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:57:44.456 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:57:44.456 -08 000000138 INF: ===================Camera #0 Frame #98===================
17-03-02 12:57:44.472 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-03-02 12:57:44.472 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-03-02 12:57:44.472 -08 000000009 INF: ===================Camera #2 Frame #98===================
17-03-02 12:57:44.573 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:44.625 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-03-02 12:57:44.625 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-03-02 12:57:44.625 -08 000000138 INF: ===================Camera #0 Frame #104===================
17-03-02 12:57:44.642 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-03-02 12:57:44.642 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-03-02 12:57:44.642 -08 000000009 INF: ===================Camera #2 Frame #105===================
17-03-02 12:57:44.709 -08 000000117 INF: Y Motor: Unshifted Position: 4069498
17-03-02 12:57:44.759 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:44.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:44.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-03-02 12:57:44.794 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-03-02 12:57:44.794 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-03-02 12:57:44.794 -08 000000138 INF: ===================Camera #0 Frame #110===================
17-03-02 12:57:44.816 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-03-02 12:57:44.816 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-03-02 12:57:44.816 -08 000000009 INF: ===================Camera #2 Frame #111===================
17-03-02 12:57:44.884 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:44.964 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:57:44.964 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:57:44.964 -08 000000138 INF: ===================Camera #0 Frame #117===================
17-03-02 12:57:44.986 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-03-02 12:57:44.986 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-03-02 12:57:44.986 -08 000000009 INF: ===================Camera #2 Frame #117===================
17-03-02 12:57:45.022 -08 000000117 INF: Y Motor: Unshifted Position: 3867135
17-03-02 12:57:45.072 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:45.137 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-03-02 12:57:45.137 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-03-02 12:57:45.137 -08 000000138 INF: ===================Camera #0 Frame #123===================
17-03-02 12:57:45.157 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-03-02 12:57:45.157 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-03-02 12:57:45.157 -08 000000009 INF: ===================Camera #2 Frame #124===================
17-03-02 12:57:45.195 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:45.307 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-03-02 12:57:45.307 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-03-02 12:57:45.307 -08 000000138 INF: ===================Camera #0 Frame #129===================
17-03-02 12:57:45.331 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-03-02 12:57:45.331 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-03-02 12:57:45.331 -08 000000009 INF: ===================Camera #2 Frame #130===================
17-03-02 12:57:45.333 -08 000000117 INF: Y Motor: Unshifted Position: 3663033
17-03-02 12:57:45.383 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:45.477 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-03-02 12:57:45.477 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-03-02 12:57:45.477 -08 000000138 INF: ===================Camera #0 Frame #135===================
17-03-02 12:57:45.502 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-03-02 12:57:45.502 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-03-02 12:57:45.502 -08 000000009 INF: ===================Camera #2 Frame #136===================
17-03-02 12:57:45.507 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:45.645 -08 000000117 INF: Y Motor: Unshifted Position: 3460022
17-03-02 12:57:45.647 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-03-02 12:57:45.647 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-03-02 12:57:45.647 -08 000000138 INF: ===================Camera #0 Frame #142===================
17-03-02 12:57:45.673 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-03-02 12:57:45.673 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-03-02 12:57:45.673 -08 000000009 INF: ===================Camera #2 Frame #143===================
17-03-02 12:57:45.695 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:45.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:45.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-03-02 12:57:45.820 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-03-02 12:57:45.820 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-03-02 12:57:45.820 -08 000000138 INF: ===================Camera #0 Frame #148===================
17-03-02 12:57:45.821 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:45.847 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-03-02 12:57:45.847 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-03-02 12:57:45.847 -08 000000009 INF: ===================Camera #2 Frame #149===================
17-03-02 12:57:45.956 -08 000000117 INF: Y Motor: Unshifted Position: 3257873
17-03-02 12:57:45.990 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-03-02 12:57:45.990 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-03-02 12:57:45.990 -08 000000138 INF: ===================Camera #0 Frame #154===================
17-03-02 12:57:46.006 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:46.018 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-03-02 12:57:46.018 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-03-02 12:57:46.018 -08 000000009 INF: ===================Camera #2 Frame #155===================
17-03-02 12:57:46.132 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:46.160 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-03-02 12:57:46.160 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-03-02 12:57:46.160 -08 000000138 INF: ===================Camera #0 Frame #161===================
17-03-02 12:57:46.188 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-03-02 12:57:46.188 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-03-02 12:57:46.188 -08 000000009 INF: ===================Camera #2 Frame #162===================
17-03-02 12:57:46.270 -08 000000117 INF: Y Motor: Unshifted Position: 3055506
17-03-02 12:57:46.320 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:46.333 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-03-02 12:57:46.333 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-03-02 12:57:46.333 -08 000000138 INF: ===================Camera #0 Frame #167===================
17-03-02 12:57:46.362 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-03-02 12:57:46.362 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-03-02 12:57:46.362 -08 000000009 INF: ===================Camera #2 Frame #168===================
17-03-02 12:57:46.443 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:46.503 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-03-02 12:57:46.503 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-03-02 12:57:46.503 -08 000000138 INF: ===================Camera #0 Frame #173===================
17-03-02 12:57:46.533 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-03-02 12:57:46.533 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-03-02 12:57:46.533 -08 000000009 INF: ===================Camera #2 Frame #174===================
17-03-02 12:57:46.584 -08 000000117 INF: Y Motor: Unshifted Position: 2852713
17-03-02 12:57:46.634 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:46.672 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-03-02 12:57:46.672 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-03-02 12:57:46.672 -08 000000138 INF: ===================Camera #0 Frame #179===================
17-03-02 12:57:46.704 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-03-02 12:57:46.704 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-03-02 12:57:46.704 -08 000000009 INF: ===================Camera #2 Frame #181===================
17-03-02 12:57:46.755 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:46.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:46.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-03-02 12:57:46.840 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-03-02 12:57:46.840 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-03-02 12:57:46.840 -08 000000138 INF: ===================Camera #0 Frame #186===================
17-03-02 12:57:46.878 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-03-02 12:57:46.878 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-03-02 12:57:46.878 -08 000000009 INF: ===================Camera #2 Frame #187===================
17-03-02 12:57:46.895 -08 000000117 INF: Y Motor: Unshifted Position: 2648398
17-03-02 12:57:46.945 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:47.013 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-03-02 12:57:47.013 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-03-02 12:57:47.013 -08 000000138 INF: ===================Camera #0 Frame #192===================
17-03-02 12:57:47.049 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-03-02 12:57:47.049 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-03-02 12:57:47.049 -08 000000009 INF: ===================Camera #2 Frame #193===================
17-03-02 12:57:47.069 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:47.183 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-03-02 12:57:47.183 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-03-02 12:57:47.183 -08 000000138 INF: ===================Camera #0 Frame #198===================
17-03-02 12:57:47.204 -08 000000117 INF: Y Motor: Unshifted Position: 2446032
17-03-02 12:57:47.220 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-03-02 12:57:47.220 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-03-02 12:57:47.220 -08 000000009 INF: ===================Camera #2 Frame #200===================
17-03-02 12:57:47.254 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:47.353 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-03-02 12:57:47.353 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-03-02 12:57:47.353 -08 000000138 INF: ===================Camera #0 Frame #205===================
17-03-02 12:57:47.380 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:47.394 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-03-02 12:57:47.394 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-03-02 12:57:47.394 -08 000000009 INF: ===================Camera #2 Frame #206===================
17-03-02 12:57:47.516 -08 000000117 INF: Y Motor: Unshifted Position: 2243879
17-03-02 12:57:47.526 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-03-02 12:57:47.526 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-03-02 12:57:47.526 -08 000000138 INF: ===================Camera #0 Frame #211===================
17-03-02 12:57:47.565 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-03-02 12:57:47.565 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-03-02 12:57:47.565 -08 000000009 INF: ===================Camera #2 Frame #212===================
17-03-02 12:57:47.566 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:47.693 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:47.696 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-03-02 12:57:47.696 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-03-02 12:57:47.696 -08 000000138 INF: ===================Camera #0 Frame #217===================
17-03-02 12:57:47.736 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-03-02 12:57:47.736 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-03-02 12:57:47.736 -08 000000009 INF: ===================Camera #2 Frame #219===================
17-03-02 12:57:47.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:47.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 0 of 5 seconds left===================
17-03-02 12:57:47.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:47.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:47.792 -08 000000018 INF: WaitCommand(5000) end
17-03-02 12:57:47.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:47.830 -08 000000117 INF: Y Motor: Unshifted Position: 2041086
17-03-02 12:57:47.866 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-03-02 12:57:47.866 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-03-02 12:57:47.866 -08 000000138 INF: ===================Camera #0 Frame #223===================
17-03-02 12:57:47.880 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:47.890 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:57:47.910 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-03-02 12:57:47.910 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-03-02 12:57:47.910 -08 000000009 INF: ===================Camera #2 Frame #225===================
17-03-02 12:57:47.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-03-02 12:57:47.967 -08 000000018 INF: Current Position of Pump is: 9600
17-03-02 12:57:48.003 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:48.036 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-03-02 12:57:48.036 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-03-02 12:57:48.036 -08 000000138 INF: ===================Camera #0 Frame #230===================
17-03-02 12:57:48.067 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-03-02 12:57:48.081 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-03-02 12:57:48.081 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-03-02 12:57:48.081 -08 000000009 INF: ===================Camera #2 Frame #231===================
17-03-02 12:57:48.141 -08 000000117 INF: Y Motor: Unshifted Position: 1835465
17-03-02 12:57:48.155 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-03-02 12:57:48.155 -08 000000018 INF: Current Position of Pump is: 9600
17-03-02 12:57:48.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-03-02 12:57:48.191 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:48.209 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-03-02 12:57:48.209 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-03-02 12:57:48.209 -08 000000138 INF: ===================Camera #0 Frame #236===================
17-03-02 12:57:48.252 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-03-02 12:57:48.252 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-03-02 12:57:48.252 -08 000000009 INF: ===================Camera #2 Frame #238===================
17-03-02 12:57:48.255 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD9600R\r
17-03-02 12:57:48.317 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:48.343 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:48.379 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-03-02 12:57:48.379 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-03-02 12:57:48.379 -08 000000138 INF: ===================Camera #0 Frame #242===================
17-03-02 12:57:48.425 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-03-02 12:57:48.425 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-03-02 12:57:48.425 -08 000000009 INF: ===================Camera #2 Frame #244===================
17-03-02 12:57:48.443 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:48.452 -08 000000117 INF: Y Motor: Unshifted Position: 1634399
17-03-02 12:57:48.502 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:48.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:48.548 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-03-02 12:57:48.548 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-03-02 12:57:48.548 -08 000000138 INF: ===================Camera #0 Frame #249===================
17-03-02 12:57:48.596 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-03-02 12:57:48.596 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-03-02 12:57:48.596 -08 000000009 INF: ===================Camera #2 Frame #250===================
17-03-02 12:57:48.629 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:48.721 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-03-02 12:57:48.721 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-03-02 12:57:48.721 -08 000000138 INF: ===================Camera #0 Frame #255===================
17-03-02 12:57:48.764 -08 000000117 INF: Y Motor: Unshifted Position: 1431583
17-03-02 12:57:48.767 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-03-02 12:57:48.767 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-03-02 12:57:48.767 -08 000000009 INF: ===================Camera #2 Frame #257===================
17-03-02 12:57:48.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:48.814 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:48.842 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:48.891 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-03-02 12:57:48.891 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-03-02 12:57:48.891 -08 000000138 INF: ===================Camera #0 Frame #261===================
17-03-02 12:57:48.940 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:48.941 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-03-02 12:57:48.941 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-03-02 12:57:48.941 -08 000000009 INF: ===================Camera #2 Frame #263===================
17-03-02 12:57:49.061 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-03-02 12:57:49.061 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-03-02 12:57:49.061 -08 000000138 INF: ===================Camera #0 Frame #267===================
17-03-02 12:57:49.078 -08 000000117 INF: Y Motor: Unshifted Position: 1229433
17-03-02 12:57:49.092 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:49.111 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-03-02 12:57:49.111 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-03-02 12:57:49.111 -08 000000009 INF: ===================Camera #2 Frame #269===================
17-03-02 12:57:49.128 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:49.153 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:49.199 -08 000000097 INF: FPGA: Recv TDIYWAIT
17-03-02 12:57:49.199 -08 000000071 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:49.201 -08 000000071 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-03-02 12:57:49.202 -08 000000061 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-03-02 12:57:49.202 -08 000000123 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-03-02 12:57:49.202 -08 000000061 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-03-02 12:57:49.202 -08 000000061 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-03-02 12:57:49.202 -08 000000061 INF: Excitation Filter 1: Moving 107 steps
17-03-02 12:57:49.202 -08 000000061 INF: FPGA: Xmit EX1MV 107\n
17-03-02 12:57:49.202 -08 000000123 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-03-02 12:57:49.202 -08 000000123 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-03-02 12:57:49.202 -08 000000123 INF: Excitation Filter 2: Moving 107 steps
17-03-02 12:57:49.203 -08 000000123 INF: FPGA: Xmit EX2MV 107\n
17-03-02 12:57:49.231 -08 000000138 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:57:49.231 -08 000000138 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:57:49.231 -08 000000138 INF: ===================Camera #0 Frame #272===================
17-03-02 12:57:49.247 -08 000000138 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:57:49.248 -08 000000138 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:49.251 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:49.391 -08 000000117 INF: Y Motor: Unshifted Position: 1025118
17-03-02 12:57:49.403 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:49.411 -08 000000138 INF: Camera #0 ReleaseBuffer
17-03-02 12:57:49.411 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-03-02 12:57:49.411 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-03-02 12:57:49.411 -08 000000009 INF: ===================Camera #2 Frame #272===================
17-03-02 12:57:49.411 -08 000000138 INF: ===================Camera TDI===================
17-03-02 12:57:49.420 -08 000000009 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-03-02 12:57:49.421 -08 000000009 INF: ===================CameraTDI Cleanup===================
17-03-02 12:57:49.439 -08 000000138 INF: ======================================
17-03-02 12:57:49.441 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:49.467 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:49.575 -08 000000004 INF: FPGA: Recv EX1MV
17-03-02 12:57:49.575 -08 000000004 INF: FPGA: Recv EX2MV
17-03-02 12:57:49.575 -08 000000061 INF: Excitation Filter 1: Moved 107 steps in 372.8575 ms
17-03-02 12:57:49.575 -08 000000061 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.003 ms
17-03-02 12:57:49.575 -08 000000061 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.1144 ms
17-03-02 12:57:49.575 -08 000000123 INF: Excitation Filter 2: Moved 107 steps in 372.7214 ms
17-03-02 12:57:49.575 -08 000000123 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.1174 ms
17-03-02 12:57:49.575 -08 000000123 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2056 ms
17-03-02 12:57:49.576 -08 000000061 INF: ======================================
17-03-02 12:57:49.576 -08 000000123 INF: ======================================
17-03-02 12:57:49.577 -08 000000117 INF: Y Motor: Unshifted Position: 992165
17-03-02 12:57:49.577 -08 000000117 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:49.577 -08 000000117 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:49.577 -08 000000071 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:49.578 -08 000000071 INF: ======================================
17-03-02 12:57:49.621 -08 000000009 INF: Camera #2 ReleaseBuffer
17-03-02 12:57:49.621 -08 000000009 INF: ===================Camera TDI===================
17-03-02 12:57:49.639 -08 000000117 INF: Y Motor: Recv v 0\r
17-03-02 12:57:49.639 -08 000000117 INF: Y Motor: Moved to 14.9217 after 7863 ms
17-03-02 12:57:49.639 -08 000000117 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:49.655 -08 000000009 INF: ======================================
17-03-02 12:57:49.657 -08 000000068 INF: ===================Camera TDI===================
17-03-02 12:57:49.658 -08 000000068 INF: ======================================
17-03-02 12:57:49.701 -08 000000117 INF: Y Motor: Recv v 4097\r
17-03-02 12:57:49.701 -08 000000117 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:49.701 -08 000000117 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:49.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:49.762 -08 000000117 INF: Y Motor: Recv v 0\r
17-03-02 12:57:49.762 -08 000000117 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:49.762 -08 000000117 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:49.779 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:49.827 -08 000000117 INF: Y Motor: Recv v 134217728\r
17-03-02 12:57:49.827 -08 000000117 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-03-02 12:57:49.827 -08 000000117 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:49.827 -08 000000117 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:49.888 -08 000000117 INF: Y Motor: Recv v 0\r
17-03-02 12:57:49.888 -08 000000117 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:49.888 -08 000000117 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:49.888 -08 000000117 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:49.950 -08 000000117 INF: Y Motor: Recv ok\r
17-03-02 12:57:49.950 -08 000000117 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:49.950 -08 000000117 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:50.013 -08 000000117 INF: Y Motor: Recv ok\r
17-03-02 12:57:50.013 -08 000000117 INF: ======================================
17-03-02 12:57:50.014 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:50.015 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:50.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.016 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-03-02 12:57:50.029 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:50.074 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-03-02 12:57:50.074 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:50.090 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:50.090 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:50.090 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-02 12:57:50.136 -08 000000010 INF: FPGA: Recv TDIYERD 1492167
17-03-02 12:57:50.136 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-03-02 12:57:50.197 -08 000000078 INF: FPGA: Recv ZADCR 35682
17-03-02 12:57:50.197 -08 000000042 INF: At scan end Y pos = 14.922 and Z pos = -0.136. Y moved -48.539 mm
17-03-02 12:57:50.197 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-03-02 12:57:50.259 -08 000000036 INF: FPGA: Recv TDIPULSES 139265
17-03-02 12:57:50.259 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-03-02 12:57:50.259 -08 000000042 INF: TDIScan finished after 11882.9503 ms
17-03-02 12:57:50.259 -08 000000042 INF: Image[0]: Y should trigger at 63.461 mm, 2nd row was at 64.369 mm (error = 0.909 mm)
17-03-02 12:57:50.259 -08 000000042 INF: Image[2]: Y should trigger at 63.461 mm, 2nd row was at 64.369 mm (error = 0.909 mm)
17-03-02 12:57:50.261 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.294 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.726 um
17-03-02 12:57:50.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.296 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-03-02 12:57:50.324 -08 000000071 INF: FPGA: Recv SWOOF_RDSTAT 0
17-03-02 12:57:50.324 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.325 -08 000000128 INF: ===================Dither Clean Up Command===================
17-03-02 12:57:50.325 -08 000000078 INF: ===================Set YMotor gains for fast moves===================
17-03-02 12:57:50.325 -08 000000105 INF: ===================Set Y Motor Motor Velocity===================
17-03-02 12:57:50.325 -08 000000098 INF: ===================Set Z Motor Motor Velocity===================
17-03-02 12:57:50.326 -08 000000098 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-03-02 12:57:50.326 -08 000000078 INF: ======================================
17-03-02 12:57:50.326 -08 000000098 INF: FPGA: Xmit ZSTEP 1288471\n
17-03-02 12:57:50.326 -08 000000105 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-03-02 12:57:50.326 -08 000000105 INF: Y Motor: Xmit s r0xcb 25000000\r
17-03-02 12:57:50.326 -08 000000107 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:57:50.326 -08 000000073 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:50.327 -08 000000107 INF: FPGA: Xmit ZSEL 0\n
17-03-02 12:57:50.329 -08 000000073 INF: ===================LFT:Extracting coords===================
17-03-02 12:57:50.355 -08 000000073 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:50.355 -08 000000073 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-03-02 12:57:50.356 -08 000000083 INF: ===================LookupFocusTracking===================
17-03-02 12:57:50.356 -08 000000133 INF: ===================LookupFocusTracking===================
17-03-02 12:57:50.356 -08 000000086 INF: ===================LookupFocusTracking===================
17-03-02 12:57:50.357 -08 000000088 INF: ===================LookupFocusTracking===================
17-03-02 12:57:50.357 -08 000000083 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:50.357 -08 000000133 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:50.357 -08 000000088 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:50.357 -08 000000086 INF: ===================Lookup Focus Tracking===================
17-03-02 12:57:50.386 -08 000000092 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:50.386 -08 000000092 INF: FPGA: Recv ZSEL 
17-03-02 12:57:50.386 -08 000000107 INF: FPGA: Xmit ZDACW 41144\n
17-03-02 12:57:50.386 -08 000000098 INF: ======================================
17-03-02 12:57:50.387 -08 000000105 INF: Y Motor: Recv ok\r
17-03-02 12:57:50.387 -08 000000105 INF: ======================================
17-03-02 12:57:50.431 -08 000000083 INF: FC:B, C:161,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:50.431 -08 000000086 INF: FC:B, C:161,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:50.431 -08 000000133 INF: FC:B, C:161,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:50.437 -08 000000088 INF: FC:B, C:161,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-03-02 12:57:50.449 -08 000000010 INF: FPGA: Recv ZDACW 
17-03-02 12:57:50.450 -08 000000107 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-03-02 12:57:50.450 -08 000000107 INF: FPGA: Xmit TDIBB 0\n
17-03-02 12:57:50.509 -08 000000136 INF: FPGA: Recv TDIBB
17-03-02 12:57:50.509 -08 000000107 INF: ===================DitherPostSwathFocusCleanup===================
17-03-02 12:57:50.510 -08 000000107 INF: ======================================
17-03-02 12:57:50.582 -08 000000083 INF: LFT found best fwhm score 2.000203 in 151 ms
17-03-02 12:57:50.582 -08 000000083 INF: LFT found good score at index 6897 with fwhm value 2.000203. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:4,T
17-03-02 12:57:50.583 -08 000000083 INF: ===================LookupFocusTracking===================
17-03-02 12:57:50.583 -08 000000086 INF: LFT found best fwhm score 2.000082 in 152 ms
17-03-02 12:57:50.583 -08 000000133 INF: LFT found best fwhm score 2.000357 in 151 ms
17-03-02 12:57:50.583 -08 000000086 INF: LFT found good score at index 6277 with fwhm value 2.000082. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:4,T
17-03-02 12:57:50.583 -08 000000133 INF: LFT found good score at index 5625 with fwhm value 2.000357. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:4,T
17-03-02 12:57:50.583 -08 000000083 INF: ======================================
17-03-02 12:57:50.583 -08 000000086 INF: ===================LookupFocusTracking===================
17-03-02 12:57:50.583 -08 000000133 INF: ===================LookupFocusTracking===================
17-03-02 12:57:50.583 -08 000000086 INF: ======================================
17-03-02 12:57:50.583 -08 000000133 INF: ======================================
17-03-02 12:57:50.602 -08 000000088 INF: LFT found best fwhm score 2.153882 in 165 ms
17-03-02 12:57:50.602 -08 000000088 INF: LFT found good score at index 2145 with fwhm value 2.153882. Next cycle, cycle 162 starting Z position for top surface is at -0.158 mm FC:B, C:161,L:4,T
17-03-02 12:57:50.602 -08 000000088 INF: ===================LookupFocusTracking===================
17-03-02 12:57:50.603 -08 000000088 INF: ======================================
17-03-02 12:57:50.604 -08 000000073 INF: ===================LookupFocusTrackingCleanup===================
17-03-02 12:57:50.605 -08 000000073 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:161,L:4,T
17-03-02 12:57:50.605 -08 000000073 INF: ======================================
17-03-02 12:57:50.606 -08 000000128 INF: ======================================
17-03-02 12:57:50.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-03-02 12:57:50.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-03-02 12:57:50.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-03-02 12:57:50.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-03-02 12:57:50.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-03-02 12:57:50.610 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-03-02 12:57:50.611 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis===================
17-03-02 12:57:50.611 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-03-02 12:57:50.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Waiting for image analysis===================
17-03-02 12:57:50.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-03-02 12:57:50.634 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-03-02 12:57:50.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4===================
17-03-02 12:57:50.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-03-02 12:57:50.635 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:50.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-03-02 12:57:50.635 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-03-02 12:57:50.636 -08 000000042 INF: Transformed XStagePosition from 78.03464 mm to 78.0094524510205 mm.
17-03-02 12:57:50.687 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5699943559021 mm.
17-03-02 12:57:50.688 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3699943559021 mm.
17-03-02 12:57:50.688 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4607443559021 mm.
17-03-02 12:57:50.693 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.693 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-03-02 12:57:50.694 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:50.694 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -157.0 um, section = D_1
17-03-02 12:57:50.697 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:50.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:50.700 -08 000000051 INF: ===================MoveEmissionFilters===================
17-03-02 12:57:50.713 -08 000000097 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:50.713 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:50.714 -08 000000097 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:50.714 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:50.715 -08 000000039 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-03-02 12:57:50.715 -08 000000039 INF: ======================================
17-03-02 12:57:50.716 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1101 Request: {"Cycle":161,"Lane":4,"Tile":1101,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF222","HCSMMF252","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.717 -08 000000068 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-03-02 12:57:50.717 -08 000000118 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-03-02 12:57:50.717 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:50.717 -08 000000112 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-03-02 12:57:50.717 -08 000000068 INF: ======================================
17-03-02 12:57:50.717 -08 000000112 INF: ======================================
17-03-02 12:57:50.718 -08 000000118 INF: ======================================
17-03-02 12:57:50.719 -08 000000097 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-03-02 12:57:50.719 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-03-02 12:57:50.719 -08 000000074 INF: Z Motor: Entering MoveAbsStepped
17-03-02 12:57:50.720 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:50.720 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-03-02 12:57:50.720 -08 000000097 INF: ======================================
17-03-02 12:57:50.721 -08 000000036 INF: ======================================
17-03-02 12:57:50.723 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-03-02 12:57:50.731 -08 000000092 INF: ===================Move X,Y===================
17-03-02 12:57:50.732 -08 000000116 INF: ===================Camera Arm TDI===================
17-03-02 12:57:50.732 -08 000000092 INF: ===================Move X,Y, Parallel===================
17-03-02 12:57:50.732 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:50.733 -08 000000116 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:50.733 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-03-02 12:57:50.734 -08 000000004 INF: ===================TDI Scan Setup===================
17-03-02 12:57:50.734 -08 000000116 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:50.735 -08 000000004 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:50.736 -08 000000004 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:57:50.736 -08 000000004 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:50.737 -08 000000004 INF: FPGA: Xmit ZSEL 3\n
17-03-02 12:57:50.741 -08 000000091 INF: ===================Move X Motor without settling===================
17-03-02 12:57:50.742 -08 000000091 INF: X Motor: Xmit PR VM\n
17-03-02 12:57:50.743 -08 000000110 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-03-02 12:57:50.744 -08 000000110 INF: ======================================
17-03-02 12:57:50.745 -08 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:50.746 -08 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-03-02 12:57:50.746 -08 000000061 INF: ===================Move Emission Filter 12 to IntoPath===================
17-03-02 12:57:50.746 -08 000000061 INF: Emission Filter 12: Remaining IntoPath
17-03-02 12:57:50.747 -08 000000061 INF: ======================================
17-03-02 12:57:50.747 -08 000000009 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:50.747 -08 000000009 INF: Y Motor: Moving to 64.5700 mm @25.000 mm/sec, started at 14.9217 mm
17-03-02 12:57:50.748 -08 000000009 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:50.748 -08 000000009 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:50.749 -08 000000044 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-03-02 12:57:50.750 -08 000000044 INF: ======================================
17-03-02 12:57:50.751 -08 000000061 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-03-02 12:57:50.752 -08 000000061 INF: ======================================
17-03-02 12:57:50.756 -08 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-03-02 12:57:50.757 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-03-02 12:57:50.758 -08 000000095 INF: ======================================
17-03-02 12:57:50.760 -08 000000098 INF: ======================================
17-03-02 12:57:50.763 -08 000000051 INF: ======================================
17-03-02 12:57:50.797 -08 000000097 INF: FPGA: Recv ZSEL 
17-03-02 12:57:50.798 -08 000000004 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:50.799 -08 000000004 INF: FPGA: Xmit TDIBB 1\n
17-03-02 12:57:50.816 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1109 Request: {"Cycle":161,"Lane":4,"Tile":1109,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF253","HCSMMF215","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.822 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1105 Request: {"Cycle":161,"Lane":4,"Tile":1105,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF209","HCSMMF188","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.823 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1103 Request: {"Cycle":161,"Lane":4,"Tile":1103,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF265","HCSMMF254","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.824 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1104 Request: {"Cycle":161,"Lane":4,"Tile":1104,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF213","HCSMMF238","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.825 -08 000000138 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1102 Request: {"Cycle":161,"Lane":4,"Tile":1102,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF270","HCSMMF201","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.829 -08 000000136 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1111 Request: {"Cycle":161,"Lane":4,"Tile":1111,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF283","HCSMMF185","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.833 -08 000000123 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1115 Request: {"Cycle":161,"Lane":4,"Tile":1115,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF272","HCSMMF285","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.835 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1106 Request: {"Cycle":161,"Lane":4,"Tile":1106,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF234","HCSMMF260","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.835 -08 000000117 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1110 Request: {"Cycle":161,"Lane":4,"Tile":1110,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF236","HCSMMF207","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.836 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1116 Request: {"Cycle":161,"Lane":4,"Tile":1116,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF179","HCSMMF223","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.837 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1108 Request: {"Cycle":161,"Lane":4,"Tile":1108,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF191","HCSMMF278","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.838 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1114 Request: {"Cycle":161,"Lane":4,"Tile":1114,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF248","HCSMMF226","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.838 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1117 Request: {"Cycle":161,"Lane":4,"Tile":1117,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF210","HCSMMF178","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.839 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1107 Request: {"Cycle":161,"Lane":4,"Tile":1107,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF192","HCSMMF268","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.840 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1112 Request: {"Cycle":161,"Lane":4,"Tile":1112,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF219","HCSMMF243","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.841 -08 000000119 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1120 Request: {"Cycle":161,"Lane":4,"Tile":1120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF183","HCSMMF230","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.841 -08 000000112 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1119 Request: {"Cycle":161,"Lane":4,"Tile":1119,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF211","HCSMMF264","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.842 -08 000000118 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1121 Request: {"Cycle":161,"Lane":4,"Tile":1121,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF237","HCSMMF224","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.843 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1118 Request: {"Cycle":161,"Lane":4,"Tile":1118,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF241","HCSMMF204","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.843 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1127 Request: {"Cycle":161,"Lane":4,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF229","HCSMMF216","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.844 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1113 Request: {"Cycle":161,"Lane":4,"Tile":1113,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF227","HCSMMF205","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.845 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1122 Request: {"Cycle":161,"Lane":4,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF198","HCSMMF232","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.846 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1125 Request: {"Cycle":161,"Lane":4,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF182","HCSMMF259","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.848 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1126 Request: {"Cycle":161,"Lane":4,"Tile":1126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF262","HCSMMF197","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.849 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1123 Request: {"Cycle":161,"Lane":4,"Tile":1123,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF202","HCSMMF203","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.851 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1128 Request: {"Cycle":161,"Lane":4,"Tile":1128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF195","HCSMMF250","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.852 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 161 Tile: 1124 Request: {"Cycle":161,"Lane":4,"Tile":1124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF280","HCSMMF193","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-03-02 12:57:50.853 -08 000000078 INF: FPGA: Recv TDIBB
17-03-02 12:57:50.853 -08 000000004 INF: ===================Initializing FPGA for ITF Focus===================
17-03-02 12:57:50.854 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:50.854 -08 000000004 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-03-02 12:57:50.855 -08 000000009 INF: Y Motor: Recv ok\r
17-03-02 12:57:50.855 -08 000000009 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:50.855 -08 000000009 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:50.855 -08 000000004 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:50.856 -08 000000091 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-03-02 12:57:50.856 -08 000000091 INF: X Motor: Xmit PR VI\n
17-03-02 12:57:50.856 -08 000000004 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-03-02 12:57:50.857 -08 000000004 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-03-02 12:57:50.857 -08 000000004 INF: FPGA: Xmit ZSTEP 1792263\n
17-03-02 12:57:50.860 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-03-02 12:57:50.915 -08 000000051 INF: FPGA: Recv ZSTEP 
17-03-02 12:57:50.915 -08 000000004 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:50.917 -08 000000009 INF: Y Motor: Recv ok\r
17-03-02 12:57:50.917 -08 000000009 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:50.917 -08 000000091 INF: X Motor: Recv PR VI\r\n410\r\n>
17-03-02 12:57:50.917 -08 000000091 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-03-02 12:57:50.917 -08 000000091 INF: X Motor: Moving to 78.0095 mm @15.000 mm/sec, started at 76.9126 mm
17-03-02 12:57:50.917 -08 000000091 INF: X Motor: Xmit MA 7786\n
17-03-02 12:57:50.917 -08 000000004 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-03-02 12:57:50.917 -08 000000004 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:50.919 -08 000000004 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-03-02 12:57:50.919 -08 000000004 INF: Z Motor: Entering ArmAbsStepped
17-03-02 12:57:50.919 -08 000000004 INF: Z Motor: Arming to move to -0.1170 mm
17-03-02 12:57:50.919 -08 000000004 INF: FPGA: Xmit ZYT 6436999 4\n
17-03-02 12:57:50.958 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:50.958 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-03-02 12:57:50.977 -08 000000061 INF: FPGA: Recv ZYT 
17-03-02 12:57:50.977 -08 000000004 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492165 enc / 14.922 mm / ) = 6436999 enc / 64.370 mm
17-03-02 12:57:50.977 -08 000000004 INF: FPGA: Xmit ZARM 30658\n
17-03-02 12:57:50.979 -08 000000091 INF: X Motor: Recv MA 7786\r\n>
17-03-02 12:57:50.979 -08 000000009 INF: Y Motor: Recv v 0\r
17-03-02 12:57:50.979 -08 000000009 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:50.979 -08 000000091 INF: X Motor: WaitUntilStopped 60073
17-03-02 12:57:50.979 -08 000000009 INF: Y Motor: Set target position to 5956999 encoder counts
17-03-02 12:57:50.979 -08 000000009 INF: Y Motor: Xmit s r0xca 5956999\r
17-03-02 12:57:50.999 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:51.004 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-03-02 12:57:51.039 -08 000000025 INF: FPGA: Recv ZARM
17-03-02 12:57:51.039 -08 000000004 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9796 ms
17-03-02 12:57:51.039 -08 000000004 INF: Z Motor: ArmAbsStepped took 119.7337 ms
17-03-02 12:57:51.039 -08 000000004 INF: ===================TDI Scan Setup, Serial===================
17-03-02 12:57:51.041 -08 000000004 INF: ===================TDI Scan Setup===================
17-03-02 12:57:51.042 -08 000000004 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-03-02 12:57:51.043 -08 000000009 INF: Y Motor: Recv ok\r
17-03-02 12:57:51.043 -08 000000009 INF: Y Motor: Start the move command
17-03-02 12:57:51.043 -08 000000009 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:51.043 -08 000000004 INF: ===================TDI Scan Setup===================
17-03-02 12:57:51.044 -08 000000004 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-03-02 12:57:51.045 -08 000000004 INF: ===================TDI Scan Setup===================
17-03-02 12:57:51.046 -08 000000004 INF: ======================================
17-03-02 12:57:51.088 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:51.094 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-03-02 12:57:51.106 -08 000000009 INF: Y Motor: Recv ok\r
17-03-02 12:57:51.106 -08 000000009 INF: Y Motor: WaitUntilStopped 61986
17-03-02 12:57:51.106 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:51.190 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-03-02 12:57:51.192 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:51.198 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-03-02 12:57:51.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:51.232 -08 000000009 INF: Y Motor: Unshifted Position: 1074912
17-03-02 12:57:51.283 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:51.298 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-03-02 12:57:51.330 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:51.335 -08 000000116 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:57:51.335 -08 000000116 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:57:51.336 -08 000000116 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:51.351 -08 000000116 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:51.353 -08 000000116 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-03-02 12:57:51.405 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:51.417 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-03-02 12:57:51.542 -08 000000009 INF: Y Motor: Unshifted Position: 1776336
17-03-02 12:57:51.592 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:51.604 -08 000000091 INF: X Motor: Xmit PR ER\n
17-03-02 12:57:51.605 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-03-02 12:57:51.666 -08 000000091 INF: X Motor: Recv PR ER\r\n0\r\n>
17-03-02 12:57:51.666 -08 000000091 INF: X Motor: Moved to 78.0088 after 686 ms
17-03-02 12:57:51.666 -08 000000091 INF: ======================================
17-03-02 12:57:51.667 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-03-02 12:57:51.717 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:51.730 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-03-02 12:57:51.730 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:51.730 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-03-02 12:57:51.855 -08 000000009 INF: Y Motor: Unshifted Position: 2562178
17-03-02 12:57:51.905 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:51.982 -08 000000116 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-03-02 12:57:51.982 -08 000000116 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-03-02 12:57:51.982 -08 000000116 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-03-02 12:57:51.998 -08 000000116 INF: ===================Camera Arm TDI, Serial===================
17-03-02 12:57:52.000 -08 000000116 INF: ===================Camera Arm TDI===================
17-03-02 12:57:52.002 -08 000000116 INF: ======================================
17-03-02 12:57:52.004 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-03-02 12:57:52.005 -08 000000074 INF: ======================================
17-03-02 12:57:52.029 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:52.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:52.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:52.100 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:52.100 -08 000000018 INF: WaitCommand(40000) start
17-03-02 12:57:52.100 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left===================
17-03-02 12:57:52.165 -08 000000009 INF: Y Motor: Unshifted Position: 3340472
17-03-02 12:57:52.215 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:52.342 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:52.478 -08 000000009 INF: Y Motor: Unshifted Position: 4120534
17-03-02 12:57:52.528 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:52.652 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:52.791 -08 000000009 INF: Y Motor: Unshifted Position: 4905476
17-03-02 12:57:52.841 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:52.965 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:53.101 -08 000000009 INF: Y Motor: Unshifted Position: 5677690
17-03-02 12:57:53.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:53.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left===================
17-03-02 12:57:53.151 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:53.278 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:53.414 -08 000000009 INF: Y Motor: Unshifted Position: 5957000
17-03-02 12:57:53.414 -08 000000009 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-03-02 12:57:53.414 -08 000000009 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:53.476 -08 000000009 INF: Y Motor: Recv v 0\r
17-03-02 12:57:53.476 -08 000000009 INF: Y Motor: Moved to 64.5700 after 2369 ms
17-03-02 12:57:53.476 -08 000000009 INF: Y Motor: Xmit g r0xc9\r
17-03-02 12:57:53.538 -08 000000009 INF: Y Motor: Recv v 4096\r
17-03-02 12:57:53.538 -08 000000009 INF: Y Motor: Status After move finished OK:
17-03-02 12:57:53.538 -08 000000009 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:53.601 -08 000000009 INF: Y Motor: Recv v 0\r
17-03-02 12:57:53.601 -08 000000009 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:53.601 -08 000000009 INF: Y Motor: Xmit g r0xa1\r
17-03-02 12:57:53.663 -08 000000009 INF: Y Motor: Recv v 402653184\r
17-03-02 12:57:53.663 -08 000000009 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-03-02 12:57:53.663 -08 000000009 INF: Y Motor: Get latched fault status: After move finished OK
17-03-02 12:57:53.663 -08 000000009 INF: Y Motor: Xmit g r0xa4\r
17-03-02 12:57:53.725 -08 000000009 INF: Y Motor: Recv v 0\r
17-03-02 12:57:53.725 -08 000000009 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-03-02 12:57:53.725 -08 000000009 INF: Y Motor: After move finished OK: Clear latched fault status
17-03-02 12:57:53.725 -08 000000009 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:53.790 -08 000000009 INF: Y Motor: Recv ok\r
17-03-02 12:57:53.790 -08 000000009 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-03-02 12:57:53.790 -08 000000009 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:53.852 -08 000000009 INF: Y Motor: Recv ok\r
17-03-02 12:57:53.852 -08 000000009 INF: ======================================
17-03-02 12:57:53.853 -08 000000092 INF: ===================Move X,Y===================
17-03-02 12:57:53.855 -08 000000092 INF: ======================================
17-03-02 12:57:53.856 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-03-02 12:57:53.856 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:53.857 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-03-02 12:57:53.857 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-03-02 12:57:53.914 -08 000000042 INF: Y Motor: Recv ok\r
17-03-02 12:57:53.914 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-03-02 12:57:53.974 -08 000000078 INF: FPGA: Recv ZFREQCL
17-03-02 12:57:53.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-03-02 12:57:53.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:53.975 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-03-02 12:57:54.036 -08 000000072 INF: FPGA: Recv TDIYERD 6457000
17-03-02 12:57:54.036 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457000 counts (64.570 mm)
17-03-02 12:57:54.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:54.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:54.039 -08 000000110 INF: ===================TDI FPGA Arm===================
17-03-02 12:57:54.039 -08 000000092 INF: ===================Set YMotor gains for scans===================
17-03-02 12:57:54.039 -08 000000092 INF: ======================================
17-03-02 12:57:54.039 -08 000000110 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:54.040 -08 000000110 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-03-02 12:57:54.040 -08 000000110 INF: FPGA: Xmit TDIYPOS 6346074\n
17-03-02 12:57:54.098 -08 000000137 INF: FPGA: Recv TDIYPOS
17-03-02 12:57:54.100 -08 000000110 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:54.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:54.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left===================
17-03-02 12:57:54.101 -08 000000110 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-03-02 12:57:54.102 -08 000000110 INF: FPGA: Xmit TDIYARM3 139264 6436999 1 1\n
17-03-02 12:57:54.160 -08 000000105 INF: FPGA: Recv TDIYARM3
17-03-02 12:57:54.160 -08 000000110 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-03-02 12:57:54.161 -08 000000110 INF: ===================TDI FPGA Arm===================
17-03-02 12:57:54.162 -08 000000110 INF: ======================================
17-03-02 12:57:54.164 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-03-02 12:57:54.164 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-03-02 12:57:54.164 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:54.165 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:54.166 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:54.166 -08 000000112 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-03-02 12:57:54.166 -08 000000009 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-03-02 12:57:54.166 -08 000000112 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-03-02 12:57:54.166 -08 000000112 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-03-02 12:57:54.167 -08 000000112 INF: Excitation Filter 2: Moving -107 steps
17-03-02 12:57:54.167 -08 000000009 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-03-02 12:57:54.167 -08 000000112 INF: FPGA: Xmit EX2MV -107\n
17-03-02 12:57:54.167 -08 000000009 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-03-02 12:57:54.167 -08 000000009 INF: Excitation Filter 1: Moving -107 steps
17-03-02 12:57:54.169 -08 000000009 INF: FPGA: Xmit EX1MV -107\n
17-03-02 12:57:54.536 -08 000000091 INF: FPGA: Recv EX2MV
17-03-02 12:57:54.536 -08 000000091 INF: FPGA: Recv EX1MV
17-03-02 12:57:54.536 -08 000000112 INF: Excitation Filter 2: Moved -107 steps in 369.4051 ms
17-03-02 12:57:54.536 -08 000000112 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.5758 ms
17-03-02 12:57:54.536 -08 000000112 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.6537 ms
17-03-02 12:57:54.536 -08 000000009 INF: Excitation Filter 1: Moved -107 steps in 369.2356 ms
17-03-02 12:57:54.536 -08 000000009 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.7846 ms
17-03-02 12:57:54.536 -08 000000009 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.8879 ms
17-03-02 12:57:54.537 -08 000000112 INF: ======================================
17-03-02 12:57:54.537 -08 000000009 INF: ======================================
17-03-02 12:57:54.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:54.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #161, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-03-02 12:57:54.540 -08 000000097 INF: ===================Camera TDI===================
17-03-02 12:57:54.540 -08 000000117 INF: ===================Wait for frames then close excitation filters===================
17-03-02 12:57:54.540 -08 000000098 INF: ===================Move Y Motor without settling===================
17-03-02 12:57:54.540 -08 000000025 INF: ===================FPGA Z Wait===================
17-03-02 12:57:54.540 -08 000000098 INF: Y Motor: Moving to 14.9217 mm @6.500 mm/sec, started at 64.5700 mm
17-03-02 12:57:54.540 -08 000000025 INF: FPGA: Xmit ZWAIT\n
17-03-02 12:57:54.540 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-03-02 12:57:54.541 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-03-02 12:57:54.541 -08 000000097 INF: ===================Camera TDI, Parallel===================
17-03-02 12:57:54.541 -08 000000117 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-03-02 12:57:54.542 -08 000000054 INF: ===================Camera TDI===================
17-03-02 12:57:54.543 -08 000000071 INF: ===================Camera TDI===================
17-03-02 12:57:54.544 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:54.544 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:54.544 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:54.544 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:54.550 -08 000000117 INF: FPGA: Xmit TDIYWAIT\n
17-03-02 12:57:54.600 -08 000000098 INF: Y Motor: Recv ok\r
17-03-02 12:57:54.600 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-03-02 12:57:54.600 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-03-02 12:57:54.661 -08 000000098 INF: Y Motor: Recv ok\r
17-03-02 12:57:54.661 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-03-02 12:57:54.694 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:54.694 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:54.694 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:54.694 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:54.726 -08 000000098 INF: Y Motor: Recv v 0\r
17-03-02 12:57:54.726 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-03-02 12:57:54.726 -08 000000098 INF: Y Motor: Set target position to 992166 encoder counts
17-03-02 12:57:54.726 -08 000000098 INF: Y Motor: Xmit s r0xca 992166\r
17-03-02 12:57:54.788 -08 000000098 INF: Y Motor: Recv ok\r
17-03-02 12:57:54.788 -08 000000098 INF: Y Motor: Start the move command
17-03-02 12:57:54.788 -08 000000098 INF: Y Motor: Xmit t 1\r
17-03-02 12:57:54.844 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:54.844 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-03-02 12:57:54.844 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:54.844 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-03-02 12:57:54.850 -08 000000098 INF: Y Motor: Recv ok\r
17-03-02 12:57:54.850 -08 000000098 INF: Y Motor: WaitUntilStopped 67638
17-03-02 12:57:54.850 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:54.910 -08 000000119 INF: FPGA: Recv ZWAIT 
17-03-02 12:57:54.910 -08 000000025 INF: ======================================
17-03-02 12:57:54.974 -08 000000098 INF: Y Motor: Unshifted Position: 5895148
17-03-02 12:57:54.994 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:54.994 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-03-02 12:57:54.994 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:54.994 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-03-02 12:57:54.994 -08 000000054 INF: ===================Camera #2 Frame #5===================
17-03-02 12:57:54.994 -08 000000071 INF: ===================Camera #0 Frame #5===================
17-03-02 12:57:55.024 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:55.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:55.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 37 of 40 seconds left===================
17-03-02 12:57:55.148 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:55.166 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:57:55.166 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:57:55.166 -08 000000071 INF: ===================Camera #0 Frame #11===================
17-03-02 12:57:55.167 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-03-02 12:57:55.167 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-03-02 12:57:55.167 -08 000000054 INF: ===================Camera #2 Frame #11===================
17-03-02 12:57:55.287 -08 000000098 INF: Y Motor: Unshifted Position: 5691482
17-03-02 12:57:55.337 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:55.342 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:57:55.342 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:57:55.342 -08 000000071 INF: ===================Camera #0 Frame #17===================
17-03-02 12:57:55.345 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-03-02 12:57:55.345 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-03-02 12:57:55.345 -08 000000054 INF: ===================Camera #2 Frame #17===================
17-03-02 12:57:55.462 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:55.515 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-03-02 12:57:55.515 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-03-02 12:57:55.515 -08 000000054 INF: ===================Camera #2 Frame #24===================
17-03-02 12:57:55.518 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-03-02 12:57:55.518 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-03-02 12:57:55.518 -08 000000071 INF: ===================Camera #0 Frame #24===================
17-03-02 12:57:55.598 -08 000000098 INF: Y Motor: Unshifted Position: 5489991
17-03-02 12:57:55.648 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:55.689 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-03-02 12:57:55.689 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-03-02 12:57:55.689 -08 000000071 INF: ===================Camera #0 Frame #30===================
17-03-02 12:57:55.694 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-03-02 12:57:55.694 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-03-02 12:57:55.694 -08 000000054 INF: ===================Camera #2 Frame #30===================
17-03-02 12:57:55.772 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:55.859 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-03-02 12:57:55.859 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-03-02 12:57:55.859 -08 000000071 INF: ===================Camera #0 Frame #36===================
17-03-02 12:57:55.864 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-03-02 12:57:55.864 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-03-02 12:57:55.864 -08 000000054 INF: ===================Camera #2 Frame #37===================
17-03-02 12:57:55.911 -08 000000098 INF: Y Motor: Unshifted Position: 5285660
17-03-02 12:57:55.961 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:56.028 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-03-02 12:57:56.028 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-03-02 12:57:56.028 -08 000000071 INF: ===================Camera #0 Frame #43===================
17-03-02 12:57:56.037 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-03-02 12:57:56.037 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-03-02 12:57:56.037 -08 000000054 INF: ===================Camera #2 Frame #43===================
17-03-02 12:57:56.085 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:56.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:56.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 36 of 40 seconds left===================
17-03-02 12:57:56.200 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-03-02 12:57:56.200 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-03-02 12:57:56.200 -08 000000071 INF: ===================Camera #0 Frame #49===================
17-03-02 12:57:56.206 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-03-02 12:57:56.206 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-03-02 12:57:56.206 -08 000000054 INF: ===================Camera #2 Frame #49===================
17-03-02 12:57:56.223 -08 000000098 INF: Y Motor: Unshifted Position: 5083512
17-03-02 12:57:56.273 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:56.368 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-03-02 12:57:56.368 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-03-02 12:57:56.368 -08 000000071 INF: ===================Camera #0 Frame #55===================
17-03-02 12:57:56.375 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-03-02 12:57:56.375 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-03-02 12:57:56.375 -08 000000054 INF: ===================Camera #2 Frame #55===================
17-03-02 12:57:56.398 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:56.534 -08 000000098 INF: Y Motor: Unshifted Position: 4880496
17-03-02 12:57:56.537 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-03-02 12:57:56.537 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-03-02 12:57:56.537 -08 000000071 INF: ===================Camera #0 Frame #61===================
17-03-02 12:57:56.545 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-03-02 12:57:56.545 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-03-02 12:57:56.545 -08 000000054 INF: ===================Camera #2 Frame #62===================
17-03-02 12:57:56.584 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:56.705 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-03-02 12:57:56.705 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-03-02 12:57:56.705 -08 000000071 INF: ===================Camera #0 Frame #68===================
17-03-02 12:57:56.708 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:56.717 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-03-02 12:57:56.717 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-03-02 12:57:56.717 -08 000000054 INF: ===================Camera #2 Frame #68===================
17-03-02 12:57:56.848 -08 000000098 INF: Y Motor: Unshifted Position: 4677044
17-03-02 12:57:56.877 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-03-02 12:57:56.877 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-03-02 12:57:56.877 -08 000000071 INF: ===================Camera #0 Frame #74===================
17-03-02 12:57:56.887 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-03-02 12:57:56.887 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-03-02 12:57:56.887 -08 000000054 INF: ===================Camera #2 Frame #74===================
17-03-02 12:57:56.898 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:57.021 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:57.045 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-03-02 12:57:57.045 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-03-02 12:57:57.045 -08 000000071 INF: ===================Camera #0 Frame #80===================
17-03-02 12:57:57.056 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-03-02 12:57:57.056 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-03-02 12:57:57.056 -08 000000054 INF: ===================Camera #2 Frame #80===================
17-03-02 12:57:57.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:57.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 35 of 40 seconds left===================
17-03-02 12:57:57.159 -08 000000098 INF: Y Motor: Unshifted Position: 4475537
17-03-02 12:57:57.209 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:57.213 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-03-02 12:57:57.213 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-03-02 12:57:57.213 -08 000000071 INF: ===================Camera #0 Frame #86===================
17-03-02 12:57:57.225 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-03-02 12:57:57.225 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-03-02 12:57:57.225 -08 000000054 INF: ===================Camera #2 Frame #87===================
17-03-02 12:57:57.335 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:57.382 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-03-02 12:57:57.382 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-03-02 12:57:57.382 -08 000000071 INF: ===================Camera #0 Frame #92===================
17-03-02 12:57:57.397 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-03-02 12:57:57.397 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-03-02 12:57:57.397 -08 000000054 INF: ===================Camera #2 Frame #93===================
17-03-02 12:57:57.493 -08 000000098 INF: Y Motor: Unshifted Position: 4271870
17-03-02 12:57:57.543 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:57.550 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-03-02 12:57:57.550 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-03-02 12:57:57.550 -08 000000071 INF: ===================Camera #0 Frame #99===================
17-03-02 12:57:57.566 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-03-02 12:57:57.566 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-03-02 12:57:57.566 -08 000000054 INF: ===================Camera #2 Frame #99===================
17-03-02 12:57:57.659 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:57.724 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-03-02 12:57:57.724 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-03-02 12:57:57.724 -08 000000071 INF: ===================Camera #0 Frame #105===================
17-03-02 12:57:57.737 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-03-02 12:57:57.737 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-03-02 12:57:57.737 -08 000000054 INF: ===================Camera #2 Frame #106===================
17-03-02 12:57:57.798 -08 000000098 INF: Y Motor: Unshifted Position: 4058660
17-03-02 12:57:57.848 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:57.894 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-03-02 12:57:57.894 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-03-02 12:57:57.894 -08 000000071 INF: ===================Camera #0 Frame #111===================
17-03-02 12:57:57.911 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-03-02 12:57:57.911 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-03-02 12:57:57.911 -08 000000054 INF: ===================Camera #2 Frame #112===================
17-03-02 12:57:57.972 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:58.064 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-03-02 12:57:58.064 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-03-02 12:57:58.064 -08 000000071 INF: ===================Camera #0 Frame #118===================
17-03-02 12:57:58.082 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-03-02 12:57:58.082 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-03-02 12:57:58.082 -08 000000054 INF: ===================Camera #2 Frame #118===================
17-03-02 12:57:58.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:58.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left===================
17-03-02 12:57:58.111 -08 000000098 INF: Y Motor: Unshifted Position: 3856949
17-03-02 12:57:58.161 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:58.237 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-03-02 12:57:58.237 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-03-02 12:57:58.237 -08 000000071 INF: ===================Camera #0 Frame #124===================
17-03-02 12:57:58.253 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-03-02 12:57:58.253 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-03-02 12:57:58.253 -08 000000054 INF: ===================Camera #2 Frame #125===================
17-03-02 12:57:58.285 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:58.407 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-03-02 12:57:58.407 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-03-02 12:57:58.407 -08 000000071 INF: ===================Camera #0 Frame #130===================
17-03-02 12:57:58.421 -08 000000098 INF: Y Motor: Unshifted Position: 3653278
17-03-02 12:57:58.428 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-03-02 12:57:58.428 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-03-02 12:57:58.428 -08 000000054 INF: ===================Camera #2 Frame #131===================
17-03-02 12:57:58.471 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:58.577 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-03-02 12:57:58.577 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-03-02 12:57:58.577 -08 000000071 INF: ===================Camera #0 Frame #136===================
17-03-02 12:57:58.595 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:58.599 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-03-02 12:57:58.599 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-03-02 12:57:58.599 -08 000000054 INF: ===================Camera #2 Frame #137===================
17-03-02 12:57:58.735 -08 000000098 INF: Y Motor: Unshifted Position: 3451133
17-03-02 12:57:58.747 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-03-02 12:57:58.747 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-03-02 12:57:58.747 -08 000000071 INF: ===================Camera #0 Frame #143===================
17-03-02 12:57:58.770 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-03-02 12:57:58.770 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-03-02 12:57:58.770 -08 000000054 INF: ===================Camera #2 Frame #144===================
17-03-02 12:57:58.785 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:58.909 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:58.920 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-03-02 12:57:58.920 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-03-02 12:57:58.920 -08 000000071 INF: ===================Camera #0 Frame #149===================
17-03-02 12:57:58.944 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-03-02 12:57:58.944 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-03-02 12:57:58.944 -08 000000054 INF: ===================Camera #2 Frame #150===================
17-03-02 12:57:59.047 -08 000000098 INF: Y Motor: Unshifted Position: 3246816
17-03-02 12:57:59.088 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-03-02 12:57:59.088 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-03-02 12:57:59.088 -08 000000071 INF: ===================Camera #0 Frame #155===================
17-03-02 12:57:59.097 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:59.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:57:59.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 33 of 40 seconds left===================
17-03-02 12:57:59.115 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-03-02 12:57:59.115 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-03-02 12:57:59.115 -08 000000054 INF: ===================Camera #2 Frame #156===================
17-03-02 12:57:59.219 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:59.258 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-03-02 12:57:59.258 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-03-02 12:57:59.258 -08 000000071 INF: ===================Camera #0 Frame #162===================
17-03-02 12:57:59.286 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-03-02 12:57:59.286 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-03-02 12:57:59.286 -08 000000054 INF: ===================Camera #2 Frame #163===================
17-03-02 12:57:59.358 -08 000000098 INF: Y Motor: Unshifted Position: 3043803
17-03-02 12:57:59.408 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:59.432 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-03-02 12:57:59.432 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-03-02 12:57:59.432 -08 000000071 INF: ===================Camera #0 Frame #168===================
17-03-02 12:57:59.460 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-03-02 12:57:59.460 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-03-02 12:57:59.460 -08 000000054 INF: ===================Camera #2 Frame #169===================
17-03-02 12:57:59.532 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:59.600 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-03-02 12:57:59.600 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-03-02 12:57:59.600 -08 000000071 INF: ===================Camera #0 Frame #174===================
17-03-02 12:57:59.631 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-03-02 12:57:59.631 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-03-02 12:57:59.631 -08 000000054 INF: ===================Camera #2 Frame #175===================
17-03-02 12:57:59.671 -08 000000098 INF: Y Motor: Unshifted Position: 2842308
17-03-02 12:57:59.721 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:59.770 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-03-02 12:57:59.770 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-03-02 12:57:59.770 -08 000000071 INF: ===================Camera #0 Frame #180===================
17-03-02 12:57:59.802 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-03-02 12:57:59.802 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-03-02 12:57:59.802 -08 000000054 INF: ===================Camera #2 Frame #182===================
17-03-02 12:57:59.845 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:57:59.940 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-03-02 12:57:59.940 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-03-02 12:57:59.940 -08 000000071 INF: ===================Camera #0 Frame #187===================
17-03-02 12:57:59.976 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-03-02 12:57:59.976 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-03-02 12:57:59.976 -08 000000054 INF: ===================Camera #2 Frame #188===================
17-03-02 12:57:59.981 -08 000000098 INF: Y Motor: Unshifted Position: 2638863
17-03-02 12:58:00.031 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:00.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:58:00.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 32 of 40 seconds left===================
17-03-02 12:58:00.114 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-03-02 12:58:00.114 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-03-02 12:58:00.114 -08 000000071 INF: ===================Camera #0 Frame #193===================
17-03-02 12:58:00.147 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-03-02 12:58:00.147 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-03-02 12:58:00.147 -08 000000054 INF: ===================Camera #2 Frame #194===================
17-03-02 12:58:00.155 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:00.284 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-03-02 12:58:00.284 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-03-02 12:58:00.284 -08 000000071 INF: ===================Camera #0 Frame #199===================
17-03-02 12:58:00.294 -08 000000098 INF: Y Motor: Unshifted Position: 2435199
17-03-02 12:58:00.318 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-03-02 12:58:00.318 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-03-02 12:58:00.318 -08 000000054 INF: ===================Camera #2 Frame #201===================
17-03-02 12:58:00.344 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:00.454 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-03-02 12:58:00.454 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-03-02 12:58:00.454 -08 000000071 INF: ===================Camera #0 Frame #206===================
17-03-02 12:58:00.468 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:00.492 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-03-02 12:58:00.492 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-03-02 12:58:00.492 -08 000000054 INF: ===================Camera #2 Frame #207===================
17-03-02 12:58:00.607 -08 000000098 INF: Y Motor: Unshifted Position: 2233696
17-03-02 12:58:00.627 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-03-02 12:58:00.627 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-03-02 12:58:00.627 -08 000000071 INF: ===================Camera #0 Frame #212===================
17-03-02 12:58:00.657 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:00.662 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-03-02 12:58:00.662 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-03-02 12:58:00.662 -08 000000054 INF: ===================Camera #2 Frame #213===================
17-03-02 12:58:00.779 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:00.797 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-03-02 12:58:00.797 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-03-02 12:58:00.797 -08 000000071 INF: ===================Camera #0 Frame #218===================
17-03-02 12:58:00.832 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-03-02 12:58:00.832 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-03-02 12:58:00.832 -08 000000054 INF: ===================Camera #2 Frame #220===================
17-03-02 12:58:00.918 -08 000000098 INF: Y Motor: Unshifted Position: 2029386
17-03-02 12:58:00.967 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-03-02 12:58:00.967 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-03-02 12:58:00.967 -08 000000071 INF: ===================Camera #0 Frame #224===================
17-03-02 12:58:00.968 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:01.006 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-03-02 12:58:01.006 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-03-02 12:58:01.006 -08 000000054 INF: ===================Camera #2 Frame #226===================
17-03-02 12:58:01.092 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:01.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:58:01.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 31 of 40 seconds left===================
17-03-02 12:58:01.137 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-03-02 12:58:01.137 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-03-02 12:58:01.137 -08 000000071 INF: ===================Camera #0 Frame #231===================
17-03-02 12:58:01.177 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-03-02 12:58:01.177 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-03-02 12:58:01.177 -08 000000054 INF: ===================Camera #2 Frame #232===================
17-03-02 12:58:01.229 -08 000000098 INF: Y Motor: Unshifted Position: 1827658
17-03-02 12:58:01.280 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:01.311 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-03-02 12:58:01.311 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-03-02 12:58:01.311 -08 000000071 INF: ===================Camera #0 Frame #237===================
17-03-02 12:58:01.349 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-03-02 12:58:01.349 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-03-02 12:58:01.349 -08 000000054 INF: ===================Camera #2 Frame #239===================
17-03-02 12:58:01.404 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:01.481 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-03-02 12:58:01.481 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-03-02 12:58:01.481 -08 000000071 INF: ===================Camera #0 Frame #243===================
17-03-02 12:58:01.523 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-03-02 12:58:01.523 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-03-02 12:58:01.523 -08 000000054 INF: ===================Camera #2 Frame #245===================
17-03-02 12:58:01.543 -08 000000098 INF: Y Motor: Unshifted Position: 1623557
17-03-02 12:58:01.593 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:01.651 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-03-02 12:58:01.651 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-03-02 12:58:01.651 -08 000000071 INF: ===================Camera #0 Frame #250===================
17-03-02 12:58:01.694 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-03-02 12:58:01.694 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-03-02 12:58:01.694 -08 000000054 INF: ===================Camera #2 Frame #251===================
17-03-02 12:58:01.716 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:01.824 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-03-02 12:58:01.824 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-03-02 12:58:01.824 -08 000000071 INF: ===================Camera #0 Frame #256===================
17-03-02 12:58:01.855 -08 000000098 INF: Y Motor: Unshifted Position: 1420541
17-03-02 12:58:01.865 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-03-02 12:58:01.865 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-03-02 12:58:01.865 -08 000000054 INF: ===================Camera #2 Frame #258===================
17-03-02 12:58:01.905 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:01.994 -08 000000071 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-03-02 12:58:01.994 -08 000000071 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-03-02 12:58:01.994 -08 000000071 INF: ===================Camera #0 Frame #262===================
17-03-02 12:58:02.029 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-03-02 12:58:02.039 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-03-02 12:58:02.039 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-03-02 12:58:02.039 -08 000000054 INF: ===================Camera #2 Frame #264===================
17-03-02 12:58:02.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation===================
17-03-02 12:58:02.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #162, Chemistry CompleteCycle, Incorporation, Delay 30 of 40 secon