17-03-02 13:14:35.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163=================== 17-03-02 13:14:35.052 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle=================== 17-03-02 13:14:35.053 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:14:35.053 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:14:35.053 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:14:35.054 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:35.077 -08 000000036 INF: FPGA: Recv T1MOVETO 47 17-03-02 13:14:35.078 -08 000000111 INF: Tilt Motor 1: To move from 4.997 to 5.070 (0.073 mm) should take 48 steps, but required 47 steps (0.072 mm). Slippage = -0.002 mm (-0.02%) 17-03-02 13:14:35.078 -08 000000111 INF: FPGA: Xmit T1RD\n 17-03-02 13:14:35.137 -08 000000095 INF: FPGA: Recv T2MOVETO 78 17-03-02 13:14:35.137 -08 000000095 INF: FPGA: Recv T3MOVETO 79 17-03-02 13:14:35.137 -08 000000095 INF: FPGA: Recv T1RD 19955 17-03-02 13:14:35.137 -08 000000096 INF: Tilt Motor 2: To move from 5.400 to 5.280 (-0.120 mm) should take 79 steps, but required 78 steps (0.119 mm). Slippage = -0.002 mm (0.01%) 17-03-02 13:14:35.137 -08 000000129 INF: Tilt Motor 3: To move from 5.345 to 5.225 (-0.120 mm) should take 79 steps, but required 79 steps (0.120 mm). Slippage = 0.000 mm (0.00%) 17-03-02 13:14:35.137 -08 000000096 INF: FPGA: Xmit T2RD\n 17-03-02 13:14:35.137 -08 000000111 INF: Tilt Motor 1: Encoder: at motor step 3325 + 5/6 17-03-02 13:14:35.138 -08 000000129 INF: FPGA: Xmit T3RD\n 17-03-02 13:14:35.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:14:35.140 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (8)=================== 17-03-02 13:14:35.140 -08 000000018 INF: Valve A1: Go to position 8 17-03-02 13:14:35.140 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:14:35.140 -08 000000111 INF: FPGA: Xmit T1RD\n 17-03-02 13:14:35.200 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 3\r 17-03-02 13:14:35.200 -08 000000099 INF: FPGA: Recv T2RD 20791 17-03-02 13:14:35.200 -08 000000099 INF: FPGA: Recv T3RD 20571 17-03-02 13:14:35.200 -08 000000099 INF: FPGA: Recv T1RD 19955 17-03-02 13:14:35.200 -08 000000018 INF: Valve A1: 639.167 seconds since last move, > 10.000 seconds required between moves 17-03-02 13:14:35.200 -08 000000111 INF: Tilt Motor 1: Encoder: at motor step 3325 + 5/6 17-03-02 13:14:35.200 -08 000000111 INF: FPGA: Xmit T1RD\n 17-03-02 13:14:35.200 -08 000000096 INF: Tilt Motor 2: Encoder: at motor step 3465 + 1/6 17-03-02 13:14:35.200 -08 000000129 INF: Tilt Motor 3: Encoder: at motor step 3428 + 3/6 17-03-02 13:14:35.200 -08 000000018 INF: Valve A1: Taking longest path 'CC' from 3 to 8 to avoid 7 17-03-02 13:14:35.200 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC8\r 17-03-02 13:14:35.201 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-03-02 13:14:35.201 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:14:35.201 -08 000000096 INF: FPGA: Xmit T2RD\n 17-03-02 13:14:35.203 -08 000000129 INF: FPGA: Xmit T3RD\n 17-03-02 13:14:35.261 -08 000000116 INF: FPGA: Recv T1RD 19955 17-03-02 13:14:35.261 -08 000000116 INF: FPGA: Recv T2RD 20791 17-03-02 13:14:35.261 -08 000000116 INF: FPGA: Recv T3RD 20571 17-03-02 13:14:35.261 -08 000000129 INF: Tilt Motor 3: Encoder: at motor step 3428 + 3/6 17-03-02 13:14:35.261 -08 000000096 INF: Tilt Motor 2: Encoder: at motor step 3465 + 1/6 17-03-02 13:14:35.261 -08 000000129 INF: FPGA: Xmit T3RD\n 17-03-02 13:14:35.261 -08 000000111 INF: Tilt Motor 1: Encoder: at motor step 3325 + 5/6 17-03-02 13:14:35.261 -08 000000111 INF: Tilt Motor 1: After move to 5.0701, error = -0.0016, min/max error = -0.0017/0.0019, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:14:35.262 -08 000000111 INF: Tilt Motor 1: Moved to 5.0686 after 434.6356 ms 17-03-02 13:14:35.262 -08 000000111 INF: ====================================== 17-03-02 13:14:35.262 -08 000000096 INF: FPGA: Xmit T2RD\n 17-03-02 13:14:35.326 -08 000000009 INF: FPGA: Recv T3RD 20571 17-03-02 13:14:35.326 -08 000000009 INF: FPGA: Recv T2RD 20791 17-03-02 13:14:35.326 -08 000000129 INF: Tilt Motor 3: Encoder: at motor step 3428 + 3/6 17-03-02 13:14:35.326 -08 000000096 INF: Tilt Motor 2: Encoder: at motor step 3465 + 1/6 17-03-02 13:14:35.326 -08 000000096 INF: Tilt Motor 2: After move to 5.2799, error = 0.0011, min/max error = -0.0020/0.0017, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:14:35.326 -08 000000096 INF: Tilt Motor 2: Moved to 5.2809 after 498.881 ms 17-03-02 13:14:35.326 -08 000000129 INF: Tilt Motor 3: After move to 5.2250, error = 0.0000, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:14:35.327 -08 000000129 INF: Tilt Motor 3: Moved to 5.2250 after 499.5045 ms 17-03-02 13:14:35.327 -08 000000096 INF: ====================================== 17-03-02 13:14:35.327 -08 000000129 INF: ====================================== 17-03-02 13:14:35.328 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:35.329 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:35.330 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.07012470731835, m2=5.27985537096023, m3=5.22499137096023 17-03-02 13:14:35.340 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm. 17-03-02 13:14:35.352 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm. 17-03-02 13:14:35.352 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-03-02 13:14:35.352 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-03-02 13:14:35.352 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:35.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:35.357 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0 17-03-02 13:14:35.357 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format 17-03-02 13:14:35.357 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n 17-03-02 13:14:35.388 -08 000000082 INF: FPGA: Recv ZSTEP 17-03-02 13:14:35.388 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:35.389 -08 000000042 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:14:35.389 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1028 mm 17-03-02 13:14:35.389 -08 000000042 INF: FPGA: Xmit ZTRG 0\n 17-03-02 13:14:35.450 -08 000000104 INF: FPGA: Recv ZTRG 17-03-02 13:14:35.450 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n 17-03-02 13:14:35.512 -08 000000101 INF: FPGA: Recv ZYT 17-03-02 13:14:35.512 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-03-02 13:14:35.512 -08 000000042 INF: FPGA: Xmit ZMV 60292\n 17-03-02 13:14:35.574 -08 000000010 INF: FPGA: Recv @LOG Trigger Camera 17-03-02 13:14:35.574 -08 000000010 INF: FPGA: Recv ZMV 17-03-02 13:14:35.574 -08 000000006 INF: FPGA: Trigger Camera 17-03-02 13:14:35.574 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9751 ms 17-03-02 13:14:35.574 -08 000000042 INF: FPGA: Xmit ZDACR\n 17-03-02 13:14:35.636 -08 000000028 INF: FPGA: Recv ZDACR 60292 17-03-02 13:14:35.636 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.3213 ms w/comms 17-03-02 13:14:35.636 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:14:35.636 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.5037 ms 17-03-02 13:14:35.637 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:35.637 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm. 17-03-02 13:14:35.646 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-03-02 13:14:35.646 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:14:35.646 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:14:35.646 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format 17-03-02 13:14:35.646 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n 17-03-02 13:14:35.698 -08 000000118 INF: FPGA: Recv ZSTEP 17-03-02 13:14:35.709 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:35.709 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm. 17-03-02 13:14:35.718 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-03-02 13:14:35.718 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:14:35.718 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:14:35.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:35.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:14:35.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:35.720 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1 17-03-02 13:14:35.721 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:14:35.721 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:14:35.722 -08 000000083 INF: ===================Move X,Y=================== 17-03-02 13:14:35.722 -08 000000044 INF: ===================MoveEmissionFilters=================== 17-03-02 13:14:35.723 -08 000000083 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:14:35.723 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:14:35.723 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:14:35.723 -08 000000129 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:14:35.723 -08 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:14:35.724 -08 000000122 INF: ===================Move X Motor without settling=================== 17-03-02 13:14:35.724 -08 000000078 INF: ===================Move Y Motor without settling=================== 17-03-02 13:14:35.724 -08 000000122 INF: X Motor: Xmit PR VM\n 17-03-02 13:14:35.724 -08 000000078 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.8531 mm 17-03-02 13:14:35.724 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:14:35.724 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:14:35.724 -08 000000078 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:14:35.724 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:35.724 -08 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:14:35.724 -08 000000129 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:14:35.725 -08 000000116 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:14:35.725 -08 000000071 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:14:35.725 -08 000000096 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:14:35.725 -08 000000036 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:14:35.725 -08 000000029 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:14:35.725 -08 000000126 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:14:35.725 -08 000000104 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:14:35.726 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:14:35.726 -08 000000071 INF: ====================================== 17-03-02 13:14:35.726 -08 000000036 INF: ====================================== 17-03-02 13:14:35.726 -08 000000029 INF: ====================================== 17-03-02 13:14:35.726 -08 000000104 INF: ====================================== 17-03-02 13:14:35.726 -08 000000116 INF: ====================================== 17-03-02 13:14:35.727 -08 000000109 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:14:35.727 -08 000000126 INF: ====================================== 17-03-02 13:14:35.727 -08 000000109 INF: ====================================== 17-03-02 13:14:35.727 -08 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:14:35.727 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:14:35.728 -08 000000129 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:14:35.728 -08 000000096 INF: ====================================== 17-03-02 13:14:35.729 -08 000000056 INF: ====================================== 17-03-02 13:14:35.729 -08 000000098 INF: ====================================== 17-03-02 13:14:35.730 -08 000000129 INF: ====================================== 17-03-02 13:14:35.730 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:14:35.731 -08 000000069 INF: ====================================== 17-03-02 13:14:35.732 -08 000000044 INF: ====================================== 17-03-02 13:14:35.762 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:14:35.762 -08 000000078 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:14:35.762 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:35.763 -08 000000122 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:14:35.763 -08 000000122 INF: X Motor: Xmit PR VI\n 17-03-02 13:14:35.826 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 8\r 17-03-02 13:14:35.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:14:35.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 17-03-02 13:14:35.827 -08 000000122 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:14:35.827 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:14:35.827 -08 000000122 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:14:35.827 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:35.827 -08 000000122 INF: X Motor: Moving to 69.1856 mm @15.000 mm/sec, started at 26.0630 mm 17-03-02 13:14:35.827 -08 000000122 INF: X Motor: Xmit MA 4172\n 17-03-02 13:14:35.889 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:14:35.889 -08 000000078 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:35.889 -08 000000078 INF: Y Motor: Set target position to 5953351 encoder counts 17-03-02 13:14:35.889 -08 000000078 INF: Y Motor: Xmit s r0xca 5953351\r 17-03-02 13:14:35.890 -08 000000122 INF: X Motor: Recv MA 4172\r\n> 17-03-02 13:14:35.890 -08 000000122 INF: X Motor: WaitUntilStopped 62875 17-03-02 13:14:35.951 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:14:35.951 -08 000000078 INF: Y Motor: Start the move command 17-03-02 13:14:35.951 -08 000000078 INF: Y Motor: Xmit t 1\r 17-03-02 13:14:36.013 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:14:36.013 -08 000000078 INF: Y Motor: WaitUntilStopped 61987 17-03-02 13:14:36.013 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:36.139 -08 000000078 INF: Y Motor: Unshifted Position: 1066831 17-03-02 13:14:36.189 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:36.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:14:36.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:36.240 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:36.314 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:36.325 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:14:36.333 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000 17-03-02 13:14:36.425 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:14:36.452 -08 000000078 INF: Y Motor: Unshifted Position: 1774498 17-03-02 13:14:36.502 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:36.511 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-03-02 13:14:36.511 -08 000000018 INF: Current Position of Pump is: 0 17-03-02 13:14:36.611 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-03-02 13:14:36.625 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:36.698 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:36.761 -08 000000078 INF: Y Motor: Unshifted Position: 2552831 17-03-02 13:14:36.798 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:36.811 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:36.822 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:36.943 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:37.072 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:37.075 -08 000000078 INF: Y Motor: Unshifted Position: 3332774 17-03-02 13:14:37.125 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:37.136 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:14:37.236 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-03-02 13:14:37.249 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:37.323 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:37.386 -08 000000078 INF: Y Motor: Unshifted Position: 4118688 17-03-02 13:14:37.423 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:37.436 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:37.447 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:14:37.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Aspirating port PortB=================== 17-03-02 13:14:37.547 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP18240R\r 17-03-02 13:14:37.561 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:37.633 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:37.698 -08 000000078 INF: Y Motor: Unshifted Position: 4891105 17-03-02 13:14:37.733 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:37.748 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:37.823 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:37.873 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:38.009 -08 000000078 INF: Y Motor: Unshifted Position: 5673397 17-03-02 13:14:38.059 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:38.073 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:38.132 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:38.183 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:38.323 -08 000000078 INF: Y Motor: Unshifted Position: 5953351 17-03-02 13:14:38.373 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:38.382 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:38.444 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:38.511 -08 000000078 INF: Y Motor: Unshifted Position: 5953335 17-03-02 13:14:38.511 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:14:38.511 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:38.573 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:14:38.573 -08 000000078 INF: Y Motor: Moved to 64.5334 after 2560 ms 17-03-02 13:14:38.573 -08 000000078 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:14:38.635 -08 000000078 INF: Y Motor: Recv v 4096\r 17-03-02 13:14:38.635 -08 000000078 INF: Y Motor: Status After move finished OK: 17-03-02 13:14:38.635 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:38.694 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:38.697 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:14:38.697 -08 000000078 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:38.697 -08 000000078 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:14:38.756 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:38.757 -08 000000078 INF: Y Motor: Recv v 402653184\r 17-03-02 13:14:38.757 -08 000000078 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:14:38.757 -08 000000078 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:14:38.757 -08 000000078 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:14:38.823 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:14:38.823 -08 000000078 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:14:38.823 -08 000000078 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:14:38.823 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:38.885 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:14:38.885 -08 000000078 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:14:38.885 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:38.945 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:14:38.945 -08 000000078 INF: ====================================== 17-03-02 13:14:39.006 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:39.070 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:39.320 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:39.322 -08 000000122 INF: X Motor: Xmit PR ER\n 17-03-02 13:14:39.382 -08 000000122 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:14:39.382 -08 000000122 INF: X Motor: Moved to 69.1855 after 3492 ms 17-03-02 13:14:39.382 -08 000000122 INF: ====================================== 17-03-02 13:14:39.383 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:39.384 -08 000000083 INF: ===================Move X,Y=================== 17-03-02 13:14:39.385 -08 000000083 INF: ====================================== 17-03-02 13:14:39.386 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:14:39.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:39.387 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec 17-03-02 13:14:39.387 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r 17-03-02 13:14:39.445 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:14:39.445 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n 17-03-02 13:14:39.505 -08 000000118 INF: FPGA: Recv ZFREQCL 17-03-02 13:14:39.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:14:39.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:39.506 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:14:39.569 -08 000000083 INF: FPGA: Recv TDIYERD 6453352 17-03-02 13:14:39.569 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm) 17-03-02 13:14:39.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:14:39.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:14:39.571 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:39.571 -08 000000028 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:14:39.571 -08 000000028 INF: ====================================== 17-03-02 13:14:39.572 -08 000000097 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:14:39.572 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:39.573 -08 000000097 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:14:39.574 -08 000000097 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:14:39.574 -08 000000097 INF: FPGA: Xmit TDIYPOS 6433351\n 17-03-02 13:14:39.631 -08 000000132 INF: FPGA: Recv TDIYPOS 17-03-02 13:14:39.632 -08 000000097 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:14:39.633 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:39.633 -08 000000097 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:14:39.633 -08 000000097 INF: FPGA: Xmit TDIYARM2 3072 1 1\n 17-03-02 13:14:39.693 -08 000000104 INF: FPGA: Recv TDIYARM2 17-03-02 13:14:39.693 -08 000000097 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:14:39.694 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:39.695 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:39.696 -08 000000097 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:14:39.696 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:39.698 -08 000000097 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-03-02 13:14:39.699 -08 000000097 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:14:39.700 -08 000000097 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:14:39.944 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:40.004 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:40.066 -08 000000097 INF: Camera #0 AttachBuffer (imageDataPtr = 69126516224 imgPtr = 69126516224 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-03-02 13:14:40.067 -08 000000097 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072 17-03-02 13:14:40.067 -08 000000097 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:14:40.082 -08 000000097 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:14:40.084 -08 000000097 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:14:40.254 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:40.318 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:40.469 -08 000000097 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821472560 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-03-02 13:14:40.470 -08 000000097 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072 17-03-02 13:14:40.470 -08 000000097 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:14:40.485 -08 000000097 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:14:40.487 -08 000000097 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-03-02 13:14:40.488 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:40.489 -08 000000097 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:40.490 -08 000000097 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:14:40.490 -08 000000097 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:40.492 -08 000000097 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:14:40.492 -08 000000097 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:14:40.492 -08 000000097 INF: Z Motor: Arming to move to -0.0100 mm 17-03-02 13:14:40.492 -08 000000097 INF: FPGA: Xmit ZYT 0 2\n 17-03-02 13:14:40.505 -08 000000129 INF: FPGA: Recv ZYT 17-03-02 13:14:40.505 -08 000000097 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines) 17-03-02 13:14:40.505 -08 000000097 INF: FPGA: Xmit ZARM 2621\n 17-03-02 13:14:40.567 -08 000000101 INF: FPGA: Recv ZARM 17-03-02 13:14:40.567 -08 000000097 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9823 ms 17-03-02 13:14:40.567 -08 000000097 INF: Z Motor: ArmAbsStepped took 74.7057 ms 17-03-02 13:14:40.567 -08 000000097 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:40.568 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:40.568 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:40.570 -08 000000097 INF: ====================================== 17-03-02 13:14:40.571 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:14:40.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:40.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:40.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:40.573 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:40.574 -08 000000010 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:14:40.574 -08 000000094 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:14:40.574 -08 000000010 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:14:40.574 -08 000000010 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:14:40.574 -08 000000094 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:14:40.574 -08 000000094 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:14:40.574 -08 000000094 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:14:40.574 -08 000000094 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:14:40.574 -08 000000010 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:14:40.578 -08 000000010 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:14:40.630 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:40.880 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:40.941 -08 000000028 INF: FPGA: Recv EX1MV 17-03-02 13:14:40.941 -08 000000028 INF: FPGA: Recv EX2MV 17-03-02 13:14:40.941 -08 000000010 INF: Excitation Filter 2: Moved -107 steps in 366.958 ms 17-03-02 13:14:40.941 -08 000000010 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.0592 ms 17-03-02 13:14:40.941 -08 000000010 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.1572 ms 17-03-02 13:14:40.941 -08 000000094 INF: Excitation Filter 1: Moved -107 steps in 366.9702 ms 17-03-02 13:14:40.941 -08 000000094 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.1588 ms 17-03-02 13:14:40.941 -08 000000094 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.2256 ms 17-03-02 13:14:40.941 -08 000000010 INF: ====================================== 17-03-02 13:14:40.941 -08 000000094 INF: ====================================== 17-03-02 13:14:40.942 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:40.942 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:40.944 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:40.945 -08 000000044 INF: ===================Serial=================== 17-03-02 13:14:40.945 -08 000000027 INF: ===================Camera TDI=================== 17-03-02 13:14:40.945 -08 000000102 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:14:40.945 -08 000000076 INF: ===================Move Y Motor without settling=================== 17-03-02 13:14:40.945 -08 000000076 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5334 mm 17-03-02 13:14:40.945 -08 000000076 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:14:40.945 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:40.945 -08 000000044 INF: ===================Serial, FPGA Z Wait=================== 17-03-02 13:14:40.945 -08 000000102 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:14:40.946 -08 000000044 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:14:40.946 -08 000000027 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:14:40.947 -08 000000102 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:14:40.947 -08 000000097 INF: ===================Camera TDI=================== 17-03-02 13:14:40.947 -08 000000116 INF: ===================Camera TDI=================== 17-03-02 13:14:40.947 -08 000000116 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:40.947 -08 000000116 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:40.948 -08 000000097 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:40.948 -08 000000097 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:41.005 -08 000000076 INF: Y Motor: Recv ok\r 17-03-02 13:14:41.005 -08 000000076 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:14:41.005 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:41.068 -08 000000076 INF: Y Motor: Recv ok\r 17-03-02 13:14:41.068 -08 000000076 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:41.098 -08 000000097 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:41.098 -08 000000097 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:41.098 -08 000000116 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:41.098 -08 000000116 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:41.130 -08 000000076 INF: Y Motor: Recv v 0\r 17-03-02 13:14:41.130 -08 000000076 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:41.130 -08 000000076 INF: Y Motor: Set target position to 5797042 encoder counts 17-03-02 13:14:41.130 -08 000000076 INF: Y Motor: Xmit s r0xca 5797042\r 17-03-02 13:14:41.191 -08 000000076 INF: Y Motor: Recv ok\r 17-03-02 13:14:41.191 -08 000000076 INF: Y Motor: Start the move command 17-03-02 13:14:41.191 -08 000000076 INF: Y Motor: Xmit t 1\r 17-03-02 13:14:41.192 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:41.248 -08 000000097 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:41.248 -08 000000116 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:41.248 -08 000000116 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:41.248 -08 000000097 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:41.252 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:41.253 -08 000000076 INF: Y Motor: Recv ok\r 17-03-02 13:14:41.253 -08 000000076 INF: Y Motor: WaitUntilStopped 61042 17-03-02 13:14:41.253 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:41.381 -08 000000076 INF: Y Motor: Unshifted Position: 5934834 17-03-02 13:14:41.399 -08 000000097 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:41.399 -08 000000116 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:41.399 -08 000000116 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:41.399 -08 000000097 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:41.431 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:41.503 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:41.549 -08 000000097 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-03-02 13:14:41.549 -08 000000116 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-03-02 13:14:41.549 -08 000000097 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-03-02 13:14:41.549 -08 000000116 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-03-02 13:14:41.549 -08 000000097 INF: ===================Camera #0 Frame #1=================== 17-03-02 13:14:41.549 -08 000000116 INF: ===================Camera #2 Frame #1=================== 17-03-02 13:14:41.554 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:41.565 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:41.692 -08 000000076 INF: Y Motor: Unshifted Position: 5888179 17-03-02 13:14:41.702 -08 000000097 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-03-02 13:14:41.702 -08 000000097 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-03-02 13:14:41.702 -08 000000097 INF: ===================Camera #0 Frame #3=================== 17-03-02 13:14:41.703 -08 000000116 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-03-02 13:14:41.703 -08 000000116 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-03-02 13:14:41.703 -08 000000116 INF: ===================Camera #2 Frame #3=================== 17-03-02 13:14:41.742 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:41.815 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:41.858 -08 000000097 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:14:41.858 -08 000000097 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:14:41.858 -08 000000097 INF: ===================Camera #0 Frame #4=================== 17-03-02 13:14:41.859 -08 000000116 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:14:41.859 -08 000000116 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:14:41.859 -08 000000116 INF: ===================Camera #2 Frame #4=================== 17-03-02 13:14:41.866 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:41.877 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:41.911 -08 000000096 INF: RunCopyService queue size at 3/2/2017 1:14:41 PM is 1 17-03-02 13:14:42.457 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:42.457 -08 000000116 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-03-02 13:14:42.457 -08 000000116 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-03-02 13:14:42.458 -08 000000097 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-03-02 13:14:42.458 -08 000000097 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-03-02 13:14:42.458 -08 000000099 INF: FPGA: Recv ZWAIT 17-03-02 13:14:42.458 -08 000000099 INF: FPGA: Recv TDIYWAIT 17-03-02 13:14:42.458 -08 000000116 INF: ===================Camera #2 Frame #6=================== 17-03-02 13:14:42.458 -08 000000097 INF: ===================Camera #0 Frame #6=================== 17-03-02 13:14:42.459 -08 000000102 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:14:42.459 -08 000000044 INF: ===================Serial=================== 17-03-02 13:14:42.460 -08 000000102 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:14:42.461 -08 000000044 INF: ===================Serial, Confirm position Z Motor=================== 17-03-02 13:14:42.461 -08 000000044 INF: ===================Serial=================== 17-03-02 13:14:42.461 -08 000000087 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:14:42.461 -08 000000072 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:14:42.462 -08 000000087 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:14:42.462 -08 000000087 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:14:42.462 -08 000000087 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:14:42.462 -08 000000072 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:14:42.462 -08 000000087 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:14:42.462 -08 000000072 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:14:42.462 -08 000000072 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:14:42.462 -08 000000044 INF: ====================================== 17-03-02 13:14:42.464 -08 000000097 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-03-02 13:14:42.465 -08 000000116 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-03-02 13:14:42.468 -08 000000072 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:14:42.474 -08 000000097 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:14:42.475 -08 000000116 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:14:42.513 -08 000000116 INF: Camera #2 ReleaseBuffer 17-03-02 13:14:42.513 -08 000000116 INF: ===================Camera TDI=================== 17-03-02 13:14:42.514 -08 000000116 INF: ====================================== 17-03-02 13:14:42.520 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:42.520 -08 000000076 INF: Y Motor: Unshifted Position: 5797042 17-03-02 13:14:42.523 -08 000000097 INF: Camera #0 ReleaseBuffer 17-03-02 13:14:42.523 -08 000000097 INF: ===================Camera TDI=================== 17-03-02 13:14:42.524 -08 000000097 INF: ====================================== 17-03-02 13:14:42.526 -08 000000027 INF: ===================Camera TDI=================== 17-03-02 13:14:42.527 -08 000000027 INF: ====================================== 17-03-02 13:14:42.570 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:42.707 -08 000000076 INF: Y Motor: Unshifted Position: 5797042 17-03-02 13:14:42.707 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:14:42.707 -08 000000076 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:42.769 -08 000000076 INF: Y Motor: Recv v 0\r 17-03-02 13:14:42.769 -08 000000076 INF: Y Motor: Moved to 62.9704 after 1515 ms 17-03-02 13:14:42.769 -08 000000076 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:14:42.770 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:42.829 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:42.830 -08 000000076 INF: Y Motor: Recv v 4097\r 17-03-02 13:14:42.830 -08 000000076 INF: Y Motor: Status After move finished OK: 17-03-02 13:14:42.830 -08 000000076 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:42.890 -08 000000095 INF: FPGA: Recv EX1MV 17-03-02 13:14:42.890 -08 000000095 INF: FPGA: Recv EX2MV 17-03-02 13:14:42.890 -08 000000072 INF: Excitation Filter 2: Moved 107 steps in 428.1583 ms 17-03-02 13:14:42.890 -08 000000072 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 428.305 ms 17-03-02 13:14:42.890 -08 000000072 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 428.3787 ms 17-03-02 13:14:42.890 -08 000000087 INF: Excitation Filter 1: Moved 107 steps in 428.3739 ms 17-03-02 13:14:42.890 -08 000000087 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 428.5868 ms 17-03-02 13:14:42.890 -08 000000087 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 428.6605 ms 17-03-02 13:14:42.890 -08 000000072 INF: ====================================== 17-03-02 13:14:42.891 -08 000000087 INF: ====================================== 17-03-02 13:14:42.892 -08 000000076 INF: Y Motor: Recv v 0\r 17-03-02 13:14:42.892 -08 000000076 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:42.892 -08 000000076 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:14:42.892 -08 000000102 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:14:42.893 -08 000000102 INF: ====================================== 17-03-02 13:14:42.957 -08 000000076 INF: Y Motor: Recv v 134217728\r 17-03-02 13:14:42.957 -08 000000076 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:14:42.957 -08 000000076 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:14:42.957 -08 000000076 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:14:43.019 -08 000000076 INF: Y Motor: Recv v 0\r 17-03-02 13:14:43.019 -08 000000076 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:14:43.019 -08 000000076 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:14:43.019 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:43.079 -08 000000076 INF: Y Motor: Recv ok\r 17-03-02 13:14:43.079 -08 000000076 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:14:43.079 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:43.079 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:43.143 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:43.144 -08 000000076 INF: Y Motor: Recv ok\r 17-03-02 13:14:43.144 -08 000000076 INF: ====================================== 17-03-02 13:14:43.145 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:43.146 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:43.147 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.147 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:14:43.204 -08 000000053 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:14:43.204 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:14:43.266 -08 000000071 INF: FPGA: Recv TDIYERD 6297044 17-03-02 13:14:43.266 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:14:43.328 -08 000000052 INF: FPGA: Recv ZADCR 2426 17-03-02 13:14:43.328 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm 17-03-02 13:14:43.328 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:14:43.390 -08 000000036 INF: FPGA: Recv TDIPULSES 3073 17-03-02 13:14:43.390 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072 17-03-02 13:14:43.390 -08 000000042 INF: TDIScan finished after 7680.4552 ms 17-03-02 13:14:43.390 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-03-02 13:14:43.390 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-03-02 13:14:43.390 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:14:43.393 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:43.454 -08 000000055 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:14:43.455 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:43.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.456 -08 000000047 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:14:43.456 -08 000000029 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:14:43.456 -08 000000033 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:14:43.457 -08 000000047 INF: ====================================== 17-03-02 13:14:43.457 -08 000000029 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:14:43.457 -08 000000029 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:14:43.457 -08 000000033 INF: ====================================== 17-03-02 13:14:43.518 -08 000000029 INF: Y Motor: Recv ok\r 17-03-02 13:14:43.518 -08 000000029 INF: ====================================== 17-03-02 13:14:43.519 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.520 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.521 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:14:43.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:14:43.577 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.577 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:14:43.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:14:43.658 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:14:43.659 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:43.659 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:43.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, ETF: Extracting coords=================== 17-03-02 13:14:43.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:43.668 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point=================== 17-03-02 13:14:43.668 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics=================== 17-03-02 13:14:43.705 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:43.765 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:44.015 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:44.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:44.328 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:44.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point=================== 17-03-02 13:14:44.381 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.080585059190347Best Z position at top surface = -0.154015310907754Best Z position at top surface + compensator offset = -0.131315310907754 C:162,L:1,T 17-03-02 13:14:44.383 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.154015310907754 17-03-02 13:14:44.383 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94796 17-03-02 13:14:44.383 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.080585059190347 17-03-02 13:14:44.383 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59467 17-03-02 13:14:44.383 -08 000000042 INF: Z-height at LaneTopSurface is -0.154015310907754. 17-03-02 13:14:44.383 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:44.391 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:44.520 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:14:44.520 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:14:44.577 -08 000000054 INF: FPGA: Recv ZSTEP 17-03-02 13:14:44.577 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-03-02 13:14:44.579 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:44.579 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:44.580 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:44.581 -08 000000071 INF: ===================Move Tilt Motor 1=================== 17-03-02 13:14:44.581 -08 000000052 INF: ===================Move Tilt Motor 3=================== 17-03-02 13:14:44.581 -08 000000105 INF: ===================Move Tilt Motor 2=================== 17-03-02 13:14:44.581 -08 000000071 INF: Tilt Motor 1: Moving to 5.0701 mm, started at 5.0686 mm, delta = 0.0016 mm 17-03-02 13:14:44.581 -08 000000071 INF: FPGA: Xmit T1RD\n 17-03-02 13:14:44.581 -08 000000105 INF: Tilt Motor 2: Moving to 5.2799 mm, started at 5.2809 mm, delta = -0.0011 mm 17-03-02 13:14:44.581 -08 000000052 INF: ====================================== 17-03-02 13:14:44.582 -08 000000105 INF: FPGA: Xmit T2RD\n 17-03-02 13:14:44.639 -08 000000132 INF: FPGA: Recv T1RD 19954 17-03-02 13:14:44.639 -08 000000132 INF: FPGA: Recv T2RD 20791 17-03-02 13:14:44.639 -08 000000105 INF: Tilt Motor 2: Encoder: at motor step 3465 + 1/6 17-03-02 13:14:44.639 -08 000000105 INF: Tilt Motor 2: Moving to 20787 encoder counts 17-03-02 13:14:44.639 -08 000000105 INF: FPGA: Xmit T2MOVETO 20787\n 17-03-02 13:14:44.639 -08 000000071 INF: Tilt Motor 1: Encoder: at motor step 3325 + 4/6 17-03-02 13:14:44.639 -08 000000071 INF: Tilt Motor 1: Moving to 19961 encoder counts 17-03-02 13:14:44.640 -08 000000071 INF: FPGA: Xmit T1MOVETO 19961\n 17-03-02 13:14:44.641 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:44.702 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:44.763 -08 000000009 INF: FPGA: Recv T2MOVETO 0 17-03-02 13:14:44.763 -08 000000009 INF: FPGA: Recv T1MOVETO 1 17-03-02 13:14:44.763 -08 000000071 INF: Tilt Motor 1: To move from 5.068 to 5.070 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%) 17-03-02 13:14:44.763 -08 000000105 INF: Tilt Motor 2: To move from 5.281 to 5.280 (-0.001 mm) should take 1 steps, but required 0 steps (0.000 mm). Slippage = -0.002 mm (1.44%) 17-03-02 13:14:44.763 -08 000000071 INF: FPGA: Xmit T1RD\n 17-03-02 13:14:44.764 -08 000000105 INF: FPGA: Xmit T2RD\n 17-03-02 13:14:44.825 -08 000000025 INF: FPGA: Recv T1RD 19961 17-03-02 13:14:44.825 -08 000000025 INF: FPGA: Recv T2RD 20791 17-03-02 13:14:44.825 -08 000000105 INF: Tilt Motor 2: Encoder: at motor step 3465 + 1/6 17-03-02 13:14:44.825 -08 000000105 INF: FPGA: Xmit T2RD\n 17-03-02 13:14:44.825 -08 000000071 INF: Tilt Motor 1: Encoder: at motor step 3326 + 5/6 17-03-02 13:14:44.826 -08 000000071 INF: FPGA: Xmit T1RD\n 17-03-02 13:14:44.887 -08 000000010 INF: FPGA: Recv T2RD 20791 17-03-02 13:14:44.887 -08 000000010 INF: FPGA: Recv T1RD 19961 17-03-02 13:14:44.887 -08 000000071 INF: Tilt Motor 1: Encoder: at motor step 3326 + 5/6 17-03-02 13:14:44.887 -08 000000071 INF: FPGA: Xmit T1RD\n 17-03-02 13:14:44.887 -08 000000105 INF: Tilt Motor 2: Encoder: at motor step 3465 + 1/6 17-03-02 13:14:44.888 -08 000000105 INF: FPGA: Xmit T2RD\n 17-03-02 13:14:44.949 -08 000000126 INF: FPGA: Recv T1RD 19961 17-03-02 13:14:44.949 -08 000000126 INF: FPGA: Recv T2RD 20791 17-03-02 13:14:44.949 -08 000000071 INF: Tilt Motor 1: Encoder: at motor step 3326 + 5/6 17-03-02 13:14:44.949 -08 000000105 INF: Tilt Motor 2: Encoder: at motor step 3465 + 1/6 17-03-02 13:14:44.949 -08 000000071 INF: Tilt Motor 1: After move to 5.0701, error = 0.0000, min/max error = -0.0017/0.0019, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:14:44.949 -08 000000105 INF: Tilt Motor 2: After move to 5.2799, error = 0.0011, min/max error = -0.0020/0.0017, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:14:44.949 -08 000000071 INF: Tilt Motor 1: Moved to 5.0701 after 368.3141 ms 17-03-02 13:14:44.949 -08 000000105 INF: Tilt Motor 2: Moved to 5.2809 after 368.111 ms 17-03-02 13:14:44.949 -08 000000071 INF: ====================================== 17-03-02 13:14:44.949 -08 000000105 INF: ====================================== 17-03-02 13:14:44.950 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:44.951 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:44.952 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:44.952 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.07012470731835, m2=5.27985537096023, m3=5.22499137096023 17-03-02 13:14:44.952 -08 000000042 INF: ETF Best Z: -0.1313153 mm (34423 DAC) 17-03-02 13:14:44.952 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:44.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:44.953 -08 000000042 INF: Compensator: Moving IntoPath 17-03-02 13:14:44.953 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n 17-03-02 13:14:45.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:45.355 -08 000000091 INF: FPGA: Recv MIOCOMPF 17-03-02 13:14:45.355 -08 000000042 INF: Compensator: Moved IntoPath in 402 ms 17-03-02 13:14:45.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:45.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:45.358 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:45.363 -08 000000042 INF: Swath 1 position calculated to be: {X=68.63164, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface 17-03-02 13:14:45.363 -08 000000042 INF: Swath 2 position calculated to be: {X=69.73964, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface 17-03-02 13:14:45.369 -08 000000042 INF: Swath 0: Converted transform from (-113.3372, 49.33231) pixels to (-0.038985, 0.016905) mm. 17-03-02 13:14:45.375 -08 000000042 INF: Swath 1: Converted transform from (-136.0683, 48.74269) pixels to (-0.04692, 0.016905) mm. 17-03-02 13:14:45.375 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-03-02 13:14:45.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-03-02 13:14:45.376 -08 000000042 INF: Transformed XStagePosition from 68.63164 mm to 68.5926525741816 mm. 17-03-02 13:14:45.387 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5699943559021 mm. 17-03-02 13:14:45.388 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3699943559021 mm. 17-03-02 13:14:45.388 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4607443559021 mm. 17-03-02 13:14:45.390 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:45.390 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:14:45.390 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:45.390 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1 17-03-02 13:14:45.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:14:45.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:14:45.398 -08 000000033 INF: ===================MoveEmissionFilters=================== 17-03-02 13:14:45.398 -08 000000111 INF: ===================Move X,Y=================== 17-03-02 13:14:45.398 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:14:45.398 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:14:45.398 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-03-02 13:14:45.398 -08 000000076 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:14:45.398 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:14:45.399 -08 000000036 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:14:45.399 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:14:45.399 -08 000000036 INF: Z Motor: Moving to -0.1513 mm, started at -0.0100 mm 17-03-02 13:14:45.399 -08 000000111 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:14:45.399 -08 000000036 INF: FPGA: Xmit ZTRG 0\n 17-03-02 13:14:45.399 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:14:45.399 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:14:45.399 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:14:45.400 -08 000000085 INF: ===================Move X Motor without settling=================== 17-03-02 13:14:45.400 -08 000000126 INF: ===================Move Y Motor without settling=================== 17-03-02 13:14:45.400 -08 000000085 INF: X Motor: Xmit PR VM\n 17-03-02 13:14:45.400 -08 000000126 INF: Y Motor: Moving to 64.5700 mm @25.000 mm/sec, started at 62.9704 mm 17-03-02 13:14:45.400 -08 000000126 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:14:45.400 -08 000000102 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:14:45.400 -08 000000010 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:14:45.400 -08 000000099 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:14:45.400 -08 000000056 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:14:45.400 -08 000000028 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:14:45.400 -08 000000122 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:14:45.400 -08 000000102 INF: ====================================== 17-03-02 13:14:45.401 -08 000000056 INF: ====================================== 17-03-02 13:14:45.401 -08 000000126 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:45.401 -08 000000028 INF: ====================================== 17-03-02 13:14:45.401 -08 000000010 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:14:45.401 -08 000000010 INF: ====================================== 17-03-02 13:14:45.402 -08 000000076 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:14:45.403 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:14:45.403 -08 000000028 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:14:45.403 -08 000000032 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:14:45.403 -08 000000032 INF: ====================================== 17-03-02 13:14:45.403 -08 000000099 INF: ====================================== 17-03-02 13:14:45.404 -08 000000122 INF: ====================================== 17-03-02 13:14:45.404 -08 000000109 INF: ====================================== 17-03-02 13:14:45.404 -08 000000028 INF: ====================================== 17-03-02 13:14:45.405 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:14:45.405 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:14:45.405 -08 000000076 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:14:45.406 -08 000000060 INF: ====================================== 17-03-02 13:14:45.406 -08 000000069 INF: ====================================== 17-03-02 13:14:45.407 -08 000000076 INF: ====================================== 17-03-02 13:14:45.408 -08 000000033 INF: ====================================== 17-03-02 13:14:45.417 -08 000000029 INF: FPGA: Recv ZTRG 17-03-02 13:14:45.417 -08 000000036 INF: FPGA: Xmit ZYT 0 3\n 17-03-02 13:14:45.420 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:45.481 -08 000000097 INF: FPGA: Recv ZYT 17-03-02 13:14:45.481 -08 000000036 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-03-02 13:14:45.481 -08 000000036 INF: FPGA: Xmit ZMV 39666\n 17-03-02 13:14:45.483 -08 000000085 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:14:45.483 -08 000000085 INF: X Motor: Xmit PR VI\n 17-03-02 13:14:45.483 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:14:45.483 -08 000000126 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:14:45.483 -08 000000126 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:45.543 -08 000000094 INF: FPGA: Recv @LOG Trigger Camera 17-03-02 13:14:45.543 -08 000000006 INF: FPGA: Trigger Camera 17-03-02 13:14:45.545 -08 000000085 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:14:45.545 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:14:45.545 -08 000000085 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:14:45.545 -08 000000126 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:45.545 -08 000000085 INF: X Motor: Moving to 68.5927 mm @15.000 mm/sec, started at 69.1855 mm 17-03-02 13:14:45.545 -08 000000085 INF: X Motor: Xmit MA 3929\n 17-03-02 13:14:45.607 -08 000000126 INF: Y Motor: Recv v 0\r 17-03-02 13:14:45.607 -08 000000085 INF: X Motor: Recv MA 3929\r\n> 17-03-02 13:14:45.607 -08 000000126 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:45.607 -08 000000085 INF: X Motor: WaitUntilStopped 60040 17-03-02 13:14:45.607 -08 000000126 INF: Y Motor: Set target position to 5956999 encoder counts 17-03-02 13:14:45.607 -08 000000126 INF: Y Motor: Xmit s r0xca 5956999\r 17-03-02 13:14:45.669 -08 000000072 INF: FPGA: Recv ZMV 17-03-02 13:14:45.669 -08 000000036 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.1286 ms 17-03-02 13:14:45.669 -08 000000036 INF: FPGA: Xmit ZDACR\n 17-03-02 13:14:45.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:45.671 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:14:45.671 -08 000000126 INF: Y Motor: Start the move command 17-03-02 13:14:45.671 -08 000000126 INF: Y Motor: Xmit t 1\r 17-03-02 13:14:45.731 -08 000000033 INF: FPGA: Recv ZDACR 39666 17-03-02 13:14:45.731 -08 000000036 INF: Z Motor: MoveAndTrigger took 332.3496 ms w/comms 17-03-02 13:14:45.731 -08 000000036 INF: Z Motor: After move to -0.1513, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:14:45.731 -08 000000036 INF: Z Motor: MoveAbsStepped took 332.5097 ms 17-03-02 13:14:45.731 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:14:45.732 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:45.733 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:14:45.733 -08 000000126 INF: Y Motor: WaitUntilStopped 60064 17-03-02 13:14:45.733 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:45.733 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-03-02 13:14:45.734 -08 000000091 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:45.734 -08 000000088 INF: ===================Camera Arm TDI=================== 17-03-02 13:14:45.735 -08 000000091 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:45.735 -08 000000088 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:14:45.736 -08 000000091 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:14:45.736 -08 000000088 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:14:45.736 -08 000000091 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:14:45.736 -08 000000091 INF: FPGA: Xmit ZSEL 3\n 17-03-02 13:14:45.793 -08 000000052 INF: FPGA: Recv ZSEL 17-03-02 13:14:45.793 -08 000000091 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:14:45.794 -08 000000091 INF: FPGA: Xmit TDIBB 1\n 17-03-02 13:14:45.856 -08 000000010 INF: FPGA: Recv TDIBB 17-03-02 13:14:45.856 -08 000000091 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:14:45.857 -08 000000091 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:14:45.858 -08 000000126 INF: Y Motor: Unshifted Position: 5878528 17-03-02 13:14:45.858 -08 000000091 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:45.859 -08 000000091 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-03-02 13:14:45.860 -08 000000091 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-03-02 13:14:45.860 -08 000000091 INF: FPGA: Xmit ZSTEP 1792263\n 17-03-02 13:14:45.908 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:45.918 -08 000000118 INF: FPGA: Recv ZSTEP 17-03-02 13:14:45.918 -08 000000091 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:45.920 -08 000000091 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:14:45.920 -08 000000091 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:45.922 -08 000000091 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:14:45.922 -08 000000091 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:14:45.922 -08 000000091 INF: Z Motor: Arming to move to -0.1113 mm 17-03-02 13:14:45.922 -08 000000091 INF: FPGA: Xmit ZYT 6436999 4\n 17-03-02 13:14:45.980 -08 000000009 INF: FPGA: Recv ZYT 17-03-02 13:14:45.980 -08 000000091 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378528 enc / 63.785 mm / ) = 6436999 enc / 64.370 mm 17-03-02 13:14:45.980 -08 000000091 INF: FPGA: Xmit ZARM 29180\n 17-03-02 13:14:45.982 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:46.032 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:46.042 -08 000000068 INF: FPGA: Recv ZARM 17-03-02 13:14:46.042 -08 000000091 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9382 ms 17-03-02 13:14:46.042 -08 000000091 INF: Z Motor: ArmAbsStepped took 119.8846 ms 17-03-02 13:14:46.042 -08 000000091 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:46.043 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:46.044 -08 000000091 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:46.044 -08 000000085 INF: X Motor: Xmit PR ER\n 17-03-02 13:14:46.045 -08 000000091 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:14:46.045 -08 000000091 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:46.047 -08 000000091 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:14:46.047 -08 000000091 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:46.049 -08 000000091 INF: ====================================== 17-03-02 13:14:46.108 -08 000000085 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:14:46.108 -08 000000085 INF: X Motor: Moved to 68.5923 after 501 ms 17-03-02 13:14:46.108 -08 000000085 INF: ====================================== 17-03-02 13:14:46.170 -08 000000126 INF: Y Motor: Unshifted Position: 5956999 17-03-02 13:14:46.170 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:14:46.170 -08 000000126 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:46.230 -08 000000126 INF: Y Motor: Recv v 0\r 17-03-02 13:14:46.230 -08 000000126 INF: Y Motor: Moved to 64.5700 after 497 ms 17-03-02 13:14:46.230 -08 000000126 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:14:46.293 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:46.295 -08 000000126 INF: Y Motor: Recv v 4096\r 17-03-02 13:14:46.295 -08 000000126 INF: Y Motor: Status After move finished OK: 17-03-02 13:14:46.295 -08 000000126 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:46.355 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:46.356 -08 000000126 INF: Y Motor: Recv v 0\r 17-03-02 13:14:46.356 -08 000000126 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:46.356 -08 000000126 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:14:46.418 -08 000000126 INF: Y Motor: Recv v 402653184\r 17-03-02 13:14:46.418 -08 000000126 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:14:46.418 -08 000000126 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:14:46.418 -08 000000126 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:14:46.480 -08 000000126 INF: Y Motor: Recv v 0\r 17-03-02 13:14:46.480 -08 000000126 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:14:46.480 -08 000000126 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:14:46.480 -08 000000126 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:46.544 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:14:46.544 -08 000000126 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:14:46.544 -08 000000126 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:46.605 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:46.606 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:14:46.606 -08 000000126 INF: ====================================== 17-03-02 13:14:46.607 -08 000000111 INF: ===================Move X,Y=================== 17-03-02 13:14:46.608 -08 000000111 INF: ====================================== 17-03-02 13:14:46.668 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:46.774 -08 000000088 INF: Camera #0 AttachBuffer (imageDataPtr = 56928309296 imgPtr = 56928309296 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:14:46.775 -08 000000088 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:14:46.775 -08 000000088 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:14:46.790 -08 000000088 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:14:46.792 -08 000000088 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:14:46.918 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:46.979 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:47.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:47.292 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:47.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:47.602 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:47.825 -08 000000088 INF: Camera #2 AttachBuffer (imageDataPtr = 64223121456 imgPtr = 65129091120 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:14:47.825 -08 000000088 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:14:47.825 -08 000000088 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:14:47.840 -08 000000088 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:14:47.842 -08 000000088 INF: ===================Camera Arm TDI=================== 17-03-02 13:14:47.843 -08 000000088 INF: ====================================== 17-03-02 13:14:47.844 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:14:47.845 -08 000000036 INF: ====================================== 17-03-02 13:14:47.846 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:14:47.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:47.847 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-03-02 13:14:47.847 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-03-02 13:14:47.852 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:47.915 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:47.916 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:14:47.916 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-03-02 13:14:47.978 -08 000000068 INF: FPGA: Recv ZFREQCL 17-03-02 13:14:47.978 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:14:47.978 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:47.978 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:14:48.040 -08 000000083 INF: FPGA: Recv TDIYERD 6457000 17-03-02 13:14:48.040 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457000 counts (64.570 mm) 17-03-02 13:14:48.040 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:14:48.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:14:48.041 -08 000000044 INF: ===================TDI FPGA Arm=================== 17-03-02 13:14:48.041 -08 000000104 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:14:48.042 -08 000000104 INF: ====================================== 17-03-02 13:14:48.042 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:14:48.043 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:14:48.043 -08 000000044 INF: FPGA: Xmit TDIYPOS 6346074\n 17-03-02 13:14:48.102 -08 000000099 INF: FPGA: Recv TDIYPOS 17-03-02 13:14:48.102 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:14:48.103 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:14:48.104 -08 000000044 INF: FPGA: Xmit TDIYARM3 139264 6436999 1 1\n 17-03-02 13:14:48.164 -08 000000081 INF: FPGA: Recv TDIYARM3 17-03-02 13:14:48.164 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:14:48.165 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:48.165 -08 000000044 INF: ===================TDI FPGA Arm=================== 17-03-02 13:14:48.166 -08 000000044 INF: ====================================== 17-03-02 13:14:48.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:14:48.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:48.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:48.169 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:48.170 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:48.170 -08 000000104 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:14:48.170 -08 000000076 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:14:48.170 -08 000000104 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:14:48.170 -08 000000104 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:14:48.170 -08 000000104 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:14:48.170 -08 000000076 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:14:48.171 -08 000000076 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:14:48.171 -08 000000076 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:14:48.171 -08 000000104 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:14:48.173 -08 000000076 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:14:48.227 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:48.477 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:48.538 -08 000000044 INF: FPGA: Recv EX2MV 17-03-02 13:14:48.538 -08 000000104 INF: Excitation Filter 2: Moved -107 steps in 367.3112 ms 17-03-02 13:14:48.538 -08 000000104 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.4032 ms 17-03-02 13:14:48.538 -08 000000104 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.4952 ms 17-03-02 13:14:48.538 -08 000000104 INF: ====================================== 17-03-02 13:14:48.539 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:48.600 -08 000000071 INF: FPGA: Recv EX1MV 17-03-02 13:14:48.600 -08 000000076 INF: Excitation Filter 1: Moved -107 steps in 429.5367 ms 17-03-02 13:14:48.600 -08 000000076 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.636 ms 17-03-02 13:14:48.600 -08 000000076 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.7098 ms 17-03-02 13:14:48.600 -08 000000076 INF: ====================================== 17-03-02 13:14:48.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:48.603 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:48.603 -08 000000122 INF: ===================Camera TDI=================== 17-03-02 13:14:48.604 -08 000000091 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:14:48.604 -08 000000060 INF: ===================FPGA Z Wait=================== 17-03-02 13:14:48.604 -08 000000116 INF: ===================Move Y Motor without settling=================== 17-03-02 13:14:48.604 -08 000000060 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:14:48.604 -08 000000116 INF: Y Motor: Moving to 14.9217 mm @6.500 mm/sec, started at 64.5700 mm 17-03-02 13:14:48.604 -08 000000116 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:14:48.604 -08 000000116 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:48.604 -08 000000122 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:14:48.604 -08 000000091 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:14:48.605 -08 000000091 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:14:48.605 -08 000000098 INF: ===================Camera TDI=================== 17-03-02 13:14:48.605 -08 000000010 INF: ===================Camera TDI=================== 17-03-02 13:14:48.606 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:48.606 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:48.607 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:48.607 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:48.664 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:14:48.664 -08 000000116 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:14:48.664 -08 000000116 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:48.728 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:14:48.728 -08 000000116 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:48.756 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:48.756 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:48.757 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:48.757 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:48.789 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:48.790 -08 000000116 INF: Y Motor: Recv v 0\r 17-03-02 13:14:48.790 -08 000000116 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:48.790 -08 000000116 INF: Y Motor: Set target position to 992166 encoder counts 17-03-02 13:14:48.790 -08 000000116 INF: Y Motor: Xmit s r0xca 992166\r 17-03-02 13:14:48.853 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:14:48.853 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:48.853 -08 000000116 INF: Y Motor: Start the move command 17-03-02 13:14:48.853 -08 000000116 INF: Y Motor: Xmit t 1\r 17-03-02 13:14:48.906 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:48.906 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:48.907 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:14:48.907 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:14:48.913 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:14:48.913 -08 000000116 INF: Y Motor: WaitUntilStopped 67638 17-03-02 13:14:48.913 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:48.975 -08 000000099 INF: FPGA: Recv ZWAIT 17-03-02 13:14:48.975 -08 000000060 INF: ====================================== 17-03-02 13:14:49.039 -08 000000116 INF: Y Motor: Unshifted Position: 5895147 17-03-02 13:14:49.056 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:14:49.056 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:14:49.056 -08 000000010 INF: ===================Camera #2 Frame #4=================== 17-03-02 13:14:49.057 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:14:49.057 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:14:49.057 -08 000000098 INF: ===================Camera #0 Frame #4=================== 17-03-02 13:14:49.089 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:49.103 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:49.165 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:49.216 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:49.218 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-03-02 13:14:49.218 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-03-02 13:14:49.218 -08 000000010 INF: ===================Camera #2 Frame #10=================== 17-03-02 13:14:49.219 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-03-02 13:14:49.219 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-03-02 13:14:49.219 -08 000000098 INF: ===================Camera #0 Frame #10=================== 17-03-02 13:14:49.351 -08 000000116 INF: Y Motor: Unshifted Position: 5692136 17-03-02 13:14:49.387 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:14:49.387 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:14:49.387 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:14:49.387 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:14:49.387 -08 000000010 INF: ===================Camera #2 Frame #17=================== 17-03-02 13:14:49.387 -08 000000098 INF: ===================Camera #0 Frame #17=================== 17-03-02 13:14:49.401 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:49.415 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:49.476 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:49.527 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:49.558 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-03-02 13:14:49.558 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-03-02 13:14:49.558 -08 000000098 INF: ===================Camera #0 Frame #23=================== 17-03-02 13:14:49.559 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-03-02 13:14:49.559 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-03-02 13:14:49.559 -08 000000010 INF: ===================Camera #2 Frame #23=================== 17-03-02 13:14:49.663 -08 000000116 INF: Y Motor: Unshifted Position: 5488688 17-03-02 13:14:49.713 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:49.726 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:49.726 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-03-02 13:14:49.726 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-03-02 13:14:49.726 -08 000000098 INF: ===================Camera #0 Frame #29=================== 17-03-02 13:14:49.728 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-03-02 13:14:49.728 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-03-02 13:14:49.728 -08 000000010 INF: ===================Camera #2 Frame #29=================== 17-03-02 13:14:49.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:49.837 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:49.894 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-03-02 13:14:49.894 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-03-02 13:14:49.894 -08 000000098 INF: ===================Camera #0 Frame #35=================== 17-03-02 13:14:49.897 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-03-02 13:14:49.897 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-03-02 13:14:49.897 -08 000000010 INF: ===================Camera #2 Frame #35=================== 17-03-02 13:14:49.976 -08 000000116 INF: Y Motor: Unshifted Position: 5285660 17-03-02 13:14:50.026 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:50.036 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:50.062 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41. 17-03-02 13:14:50.062 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41 17-03-02 13:14:50.062 -08 000000098 INF: ===================Camera #0 Frame #41=================== 17-03-02 13:14:50.066 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:14:50.066 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:14:50.066 -08 000000010 INF: ===================Camera #2 Frame #42=================== 17-03-02 13:14:50.100 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:14:50.100 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:50.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:50.101 -08 000000018 INF: WaitCommand(5000) start 17-03-02 13:14:50.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left=================== 17-03-02 13:14:50.151 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:50.232 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-03-02 13:14:50.232 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-03-02 13:14:50.232 -08 000000098 INF: ===================Camera #0 Frame #48=================== 17-03-02 13:14:50.240 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-03-02 13:14:50.240 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-03-02 13:14:50.240 -08 000000010 INF: ===================Camera #2 Frame #48=================== 17-03-02 13:14:50.287 -08 000000116 INF: Y Motor: Unshifted Position: 5083512 17-03-02 13:14:50.337 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:50.405 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-03-02 13:14:50.405 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-03-02 13:14:50.405 -08 000000098 INF: ===================Camera #0 Frame #54=================== 17-03-02 13:14:50.411 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-03-02 13:14:50.411 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-03-02 13:14:50.411 -08 000000010 INF: ===================Camera #2 Frame #54=================== 17-03-02 13:14:50.461 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:50.575 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60. 17-03-02 13:14:50.575 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60 17-03-02 13:14:50.575 -08 000000098 INF: ===================Camera #0 Frame #60=================== 17-03-02 13:14:50.582 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:14:50.582 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:14:50.582 -08 000000010 INF: ===================Camera #2 Frame #61=================== 17-03-02 13:14:50.600 -08 000000116 INF: Y Motor: Unshifted Position: 4879847 17-03-02 13:14:50.650 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:50.745 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:14:50.745 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:14:50.745 -08 000000098 INF: ===================Camera #0 Frame #67=================== 17-03-02 13:14:50.756 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:14:50.756 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:14:50.756 -08 000000010 INF: ===================Camera #2 Frame #67=================== 17-03-02 13:14:50.774 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:50.910 -08 000000116 INF: Y Motor: Unshifted Position: 4678349 17-03-02 13:14:50.918 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-03-02 13:14:50.918 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-03-02 13:14:50.918 -08 000000098 INF: ===================Camera #0 Frame #73=================== 17-03-02 13:14:50.927 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-03-02 13:14:50.927 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-03-02 13:14:50.927 -08 000000010 INF: ===================Camera #2 Frame #73=================== 17-03-02 13:14:50.960 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:51.087 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:51.088 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-03-02 13:14:51.088 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-03-02 13:14:51.088 -08 000000098 INF: ===================Camera #0 Frame #79=================== 17-03-02 13:14:51.098 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:14:51.098 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:14:51.098 -08 000000010 INF: ===================Camera #2 Frame #80=================== 17-03-02 13:14:51.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:51.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left=================== 17-03-02 13:14:51.224 -08 000000116 INF: Y Motor: Unshifted Position: 4474672 17-03-02 13:14:51.258 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:14:51.258 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:14:51.258 -08 000000098 INF: ===================Camera #0 Frame #86=================== 17-03-02 13:14:51.272 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:14:51.272 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:14:51.272 -08 000000010 INF: ===================Camera #2 Frame #86=================== 17-03-02 13:14:51.274 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:51.398 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:51.433 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:14:51.433 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:14:51.433 -08 000000098 INF: ===================Camera #0 Frame #92=================== 17-03-02 13:14:51.444 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:14:51.444 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:14:51.444 -08 000000010 INF: ===================Camera #2 Frame #92=================== 17-03-02 13:14:51.537 -08 000000116 INF: Y Motor: Unshifted Position: 4271221 17-03-02 13:14:51.587 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:51.603 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-03-02 13:14:51.603 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-03-02 13:14:51.603 -08 000000098 INF: ===================Camera #0 Frame #98=================== 17-03-02 13:14:51.615 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-03-02 13:14:51.615 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-03-02 13:14:51.615 -08 000000010 INF: ===================Camera #2 Frame #99=================== 17-03-02 13:14:51.711 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:51.773 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104. 17-03-02 13:14:51.773 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104 17-03-02 13:14:51.773 -08 000000098 INF: ===================Camera #0 Frame #104=================== 17-03-02 13:14:51.790 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-03-02 13:14:51.790 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-03-02 13:14:51.790 -08 000000010 INF: ===================Camera #2 Frame #105=================== 17-03-02 13:14:51.848 -08 000000116 INF: Y Motor: Unshifted Position: 4068851 17-03-02 13:14:51.898 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:51.943 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:14:51.943 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:14:51.943 -08 000000098 INF: ===================Camera #0 Frame #111=================== 17-03-02 13:14:51.961 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:14:51.961 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:14:51.961 -08 000000010 INF: ===================Camera #2 Frame #111=================== 17-03-02 13:14:52.022 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:52.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:52.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left=================== 17-03-02 13:14:52.116 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-03-02 13:14:52.116 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-03-02 13:14:52.116 -08 000000098 INF: ===================Camera #0 Frame #117=================== 17-03-02 13:14:52.132 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118. 17-03-02 13:14:52.132 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118 17-03-02 13:14:52.132 -08 000000010 INF: ===================Camera #2 Frame #118=================== 17-03-02 13:14:52.161 -08 000000116 INF: Y Motor: Unshifted Position: 3865405 17-03-02 13:14:52.211 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:52.286 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-03-02 13:14:52.286 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-03-02 13:14:52.286 -08 000000098 INF: ===================Camera #0 Frame #123=================== 17-03-02 13:14:52.306 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-03-02 13:14:52.306 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-03-02 13:14:52.306 -08 000000010 INF: ===================Camera #2 Frame #124=================== 17-03-02 13:14:52.335 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:52.456 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:14:52.456 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:14:52.456 -08 000000098 INF: ===================Camera #0 Frame #130=================== 17-03-02 13:14:52.471 -08 000000116 INF: Y Motor: Unshifted Position: 3663684 17-03-02 13:14:52.477 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:14:52.477 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:14:52.477 -08 000000010 INF: ===================Camera #2 Frame #130=================== 17-03-02 13:14:52.521 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:52.629 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-03-02 13:14:52.629 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-03-02 13:14:52.629 -08 000000098 INF: ===================Camera #0 Frame #136=================== 17-03-02 13:14:52.648 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:52.648 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137. 17-03-02 13:14:52.648 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137 17-03-02 13:14:52.648 -08 000000010 INF: ===================Camera #2 Frame #137=================== 17-03-02 13:14:52.784 -08 000000116 INF: Y Motor: Unshifted Position: 3459582 17-03-02 13:14:52.799 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-03-02 13:14:52.799 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-03-02 13:14:52.799 -08 000000098 INF: ===================Camera #0 Frame #142=================== 17-03-02 13:14:52.822 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-03-02 13:14:52.822 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-03-02 13:14:52.822 -08 000000010 INF: ===================Camera #2 Frame #143=================== 17-03-02 13:14:52.834 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:52.959 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:52.969 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148. 17-03-02 13:14:52.969 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148 17-03-02 13:14:52.969 -08 000000098 INF: ===================Camera #0 Frame #148=================== 17-03-02 13:14:52.993 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-03-02 13:14:52.993 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-03-02 13:14:52.993 -08 000000010 INF: ===================Camera #2 Frame #149=================== 17-03-02 13:14:53.097 -08 000000116 INF: Y Motor: Unshifted Position: 3256571 17-03-02 13:14:53.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:53.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left=================== 17-03-02 13:14:53.139 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:14:53.139 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:14:53.139 -08 000000098 INF: ===================Camera #0 Frame #155=================== 17-03-02 13:14:53.147 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:53.164 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156. 17-03-02 13:14:53.164 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156 17-03-02 13:14:53.164 -08 000000010 INF: ===================Camera #2 Frame #156=================== 17-03-02 13:14:53.271 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:53.312 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-03-02 13:14:53.312 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-03-02 13:14:53.312 -08 000000098 INF: ===================Camera #0 Frame #161=================== 17-03-02 13:14:53.338 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-03-02 13:14:53.338 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-03-02 13:14:53.338 -08 000000010 INF: ===================Camera #2 Frame #162=================== 17-03-02 13:14:53.407 -08 000000116 INF: Y Motor: Unshifted Position: 3055073 17-03-02 13:14:53.457 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:53.482 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167. 17-03-02 13:14:53.482 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167 17-03-02 13:14:53.482 -08 000000098 INF: ===================Camera #0 Frame #167=================== 17-03-02 13:14:53.509 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:14:53.509 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:14:53.509 -08 000000010 INF: ===================Camera #2 Frame #168=================== 17-03-02 13:14:53.585 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:53.652 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:14:53.652 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:14:53.652 -08 000000098 INF: ===================Camera #0 Frame #174=================== 17-03-02 13:14:53.680 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175. 17-03-02 13:14:53.680 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175 17-03-02 13:14:53.680 -08 000000010 INF: ===================Camera #2 Frame #175=================== 17-03-02 13:14:53.721 -08 000000116 INF: Y Motor: Unshifted Position: 2850762 17-03-02 13:14:53.771 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:53.825 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-03-02 13:14:53.825 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-03-02 13:14:53.825 -08 000000098 INF: ===================Camera #0 Frame #180=================== 17-03-02 13:14:53.854 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-03-02 13:14:53.854 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-03-02 13:14:53.854 -08 000000010 INF: ===================Camera #2 Frame #181=================== 17-03-02 13:14:53.895 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:53.995 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186. 17-03-02 13:14:53.995 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186 17-03-02 13:14:53.995 -08 000000098 INF: ===================Camera #0 Frame #186=================== 17-03-02 13:14:54.025 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:14:54.025 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:14:54.025 -08 000000010 INF: ===================Camera #2 Frame #187=================== 17-03-02 13:14:54.033 -08 000000116 INF: Y Motor: Unshifted Position: 2647743 17-03-02 13:14:54.083 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:54.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:54.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left=================== 17-03-02 13:14:54.165 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:14:54.165 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:14:54.165 -08 000000098 INF: ===================Camera #0 Frame #193=================== 17-03-02 13:14:54.196 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194. 17-03-02 13:14:54.196 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194 17-03-02 13:14:54.196 -08 000000010 INF: ===================Camera #2 Frame #194=================== 17-03-02 13:14:54.207 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:54.338 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-03-02 13:14:54.338 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-03-02 13:14:54.338 -08 000000098 INF: ===================Camera #0 Frame #199=================== 17-03-02 13:14:54.343 -08 000000116 INF: Y Motor: Unshifted Position: 2446252 17-03-02 13:14:54.370 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-03-02 13:14:54.370 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-03-02 13:14:54.370 -08 000000010 INF: ===================Camera #2 Frame #200=================== 17-03-02 13:14:54.393 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:54.508 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205. 17-03-02 13:14:54.508 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205 17-03-02 13:14:54.508 -08 000000098 INF: ===================Camera #0 Frame #205=================== 17-03-02 13:14:54.521 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:54.541 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-03-02 13:14:54.541 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-03-02 13:14:54.541 -08 000000010 INF: ===================Camera #2 Frame #206=================== 17-03-02 13:14:54.657 -08 000000116 INF: Y Motor: Unshifted Position: 2242148 17-03-02 13:14:54.678 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211. 17-03-02 13:14:54.678 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211 17-03-02 13:14:54.678 -08 000000098 INF: ===================Camera #0 Frame #211=================== 17-03-02 13:14:54.707 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:54.712 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213. 17-03-02 13:14:54.712 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213 17-03-02 13:14:54.712 -08 000000010 INF: ===================Camera #2 Frame #213=================== 17-03-02 13:14:54.831 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:54.848 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-03-02 13:14:54.848 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-03-02 13:14:54.848 -08 000000098 INF: ===================Camera #0 Frame #218=================== 17-03-02 13:14:54.886 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-03-02 13:14:54.886 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-03-02 13:14:54.886 -08 000000010 INF: ===================Camera #2 Frame #219=================== 17-03-02 13:14:54.967 -08 000000116 INF: Y Motor: Unshifted Position: 2040435 17-03-02 13:14:55.017 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:55.021 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224. 17-03-02 13:14:55.021 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224 17-03-02 13:14:55.021 -08 000000098 INF: ===================Camera #0 Frame #224=================== 17-03-02 13:14:55.057 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-03-02 13:14:55.057 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-03-02 13:14:55.057 -08 000000010 INF: ===================Camera #2 Frame #225=================== 17-03-02 13:14:55.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:55.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 0 of 5 seconds left=================== 17-03-02 13:14:55.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:55.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:55.103 -08 000000018 INF: WaitCommand(5000) end 17-03-02 13:14:55.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:55.145 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:55.191 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230. 17-03-02 13:14:55.191 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230 17-03-02 13:14:55.191 -08 000000098 INF: ===================Camera #0 Frame #230=================== 17-03-02 13:14:55.201 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:14:55.228 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232. 17-03-02 13:14:55.228 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232 17-03-02 13:14:55.228 -08 000000010 INF: ===================Camera #2 Frame #232=================== 17-03-02 13:14:55.280 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 17-03-02 13:14:55.280 -08 000000018 INF: Current Position of Pump is: 18240 17-03-02 13:14:55.281 -08 000000116 INF: Y Motor: Unshifted Position: 1836333 17-03-02 13:14:55.331 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:55.361 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237. 17-03-02 13:14:55.361 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237 17-03-02 13:14:55.361 -08 000000098 INF: ===================Camera #0 Frame #237=================== 17-03-02 13:14:55.380 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:14:55.402 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-03-02 13:14:55.402 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-03-02 13:14:55.402 -08 000000010 INF: ===================Camera #2 Frame #238=================== 17-03-02 13:14:55.455 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:55.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 17-03-02 13:14:55.466 -08 000000018 INF: Current Position of Pump is: 18240 17-03-02 13:14:55.466 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Dispensing port PortC=================== 17-03-02 13:14:55.534 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243. 17-03-02 13:14:55.534 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243 17-03-02 13:14:55.534 -08 000000098 INF: ===================Camera #0 Frame #243=================== 17-03-02 13:14:55.566 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD18240R\r 17-03-02 13:14:55.573 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-03-02 13:14:55.573 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-03-02 13:14:55.573 -08 000000010 INF: ===================Camera #2 Frame #244=================== 17-03-02 13:14:55.591 -08 000000116 INF: Y Motor: Unshifted Position: 1634613 17-03-02 13:14:55.641 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:55.652 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:55.704 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-03-02 13:14:55.704 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-03-02 13:14:55.704 -08 000000098 INF: ===================Camera #0 Frame #249=================== 17-03-02 13:14:55.744 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251. 17-03-02 13:14:55.744 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251 17-03-02 13:14:55.744 -08 000000010 INF: ===================Camera #2 Frame #251=================== 17-03-02 13:14:55.752 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:55.769 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:55.777 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:55.873 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-03-02 13:14:55.873 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-03-02 13:14:55.873 -08 000000098 INF: ===================Camera #0 Frame #255=================== 17-03-02 13:14:55.905 -08 000000116 INF: Y Motor: Unshifted Position: 1430503 17-03-02 13:14:55.919 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-03-02 13:14:55.919 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-03-02 13:14:55.919 -08 000000010 INF: ===================Camera #2 Frame #257=================== 17-03-02 13:14:55.955 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:56.029 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:56.043 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262. 17-03-02 13:14:56.043 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262 17-03-02 13:14:56.043 -08 000000098 INF: ===================Camera #0 Frame #262=================== 17-03-02 13:14:56.080 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:56.089 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:56.090 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-03-02 13:14:56.090 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-03-02 13:14:56.090 -08 000000010 INF: ===================Camera #2 Frame #263=================== 17-03-02 13:14:56.216 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-03-02 13:14:56.216 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-03-02 13:14:56.216 -08 000000098 INF: ===================Camera #0 Frame #268=================== 17-03-02 13:14:56.217 -08 000000116 INF: Y Motor: Unshifted Position: 1227482 17-03-02 13:14:56.261 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270. 17-03-02 13:14:56.261 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270 17-03-02 13:14:56.261 -08 000000010 INF: ===================Camera #2 Frame #270=================== 17-03-02 13:14:56.267 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:56.339 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:56.340 -08 000000104 INF: FPGA: Recv TDIYWAIT 17-03-02 13:14:56.340 -08 000000091 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:14:56.341 -08 000000091 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:14:56.342 -08 000000094 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:14:56.343 -08 000000101 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:14:56.343 -08 000000094 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:14:56.343 -08 000000094 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:14:56.343 -08 000000094 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:14:56.343 -08 000000101 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:14:56.343 -08 000000094 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:14:56.343 -08 000000101 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:14:56.343 -08 000000101 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:14:56.351 -08 000000101 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:14:56.386 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:14:56.386 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:14:56.386 -08 000000098 INF: ===================Camera #0 Frame #272=================== 17-03-02 13:14:56.391 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:56.399 -08 000000098 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:14:56.400 -08 000000098 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:14:56.402 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:56.527 -08 000000116 INF: Y Motor: Unshifted Position: 1025984 17-03-02 13:14:56.567 -08 000000098 INF: Camera #0 ReleaseBuffer 17-03-02 13:14:56.567 -08 000000010 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:14:56.567 -08 000000010 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:14:56.567 -08 000000010 INF: ===================Camera #2 Frame #272=================== 17-03-02 13:14:56.567 -08 000000098 INF: ===================Camera TDI=================== 17-03-02 13:14:56.574 -08 000000010 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:14:56.575 -08 000000010 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:14:56.577 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:56.597 -08 000000098 INF: ====================================== 17-03-02 13:14:56.652 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:56.712 -08 000000104 INF: FPGA: Recv EX1MV 17-03-02 13:14:56.712 -08 000000104 INF: FPGA: Recv EX2MV 17-03-02 13:14:56.712 -08 000000101 INF: Excitation Filter 2: Moved 107 steps in 368.9782 ms 17-03-02 13:14:56.712 -08 000000094 INF: Excitation Filter 1: Moved 107 steps in 369.2018 ms 17-03-02 13:14:56.712 -08 000000101 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.1288 ms 17-03-02 13:14:56.712 -08 000000101 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.2808 ms 17-03-02 13:14:56.712 -08 000000094 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.3006 ms 17-03-02 13:14:56.712 -08 000000094 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.4823 ms 17-03-02 13:14:56.712 -08 000000101 INF: ====================================== 17-03-02 13:14:56.712 -08 000000094 INF: ====================================== 17-03-02 13:14:56.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:56.714 -08 000000116 INF: Y Motor: Unshifted Position: 992167 17-03-02 13:14:56.714 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:14:56.714 -08 000000116 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:56.714 -08 000000091 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:14:56.715 -08 000000091 INF: ====================================== 17-03-02 13:14:56.776 -08 000000116 INF: Y Motor: Recv v 0\r 17-03-02 13:14:56.776 -08 000000116 INF: Y Motor: Moved to 14.9217 after 7863 ms 17-03-02 13:14:56.776 -08 000000116 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:14:56.777 -08 000000010 INF: Camera #2 ReleaseBuffer 17-03-02 13:14:56.777 -08 000000010 INF: ===================Camera TDI=================== 17-03-02 13:14:56.812 -08 000000010 INF: ====================================== 17-03-02 13:14:56.813 -08 000000122 INF: ===================Camera TDI=================== 17-03-02 13:14:56.814 -08 000000122 INF: ====================================== 17-03-02 13:14:56.841 -08 000000116 INF: Y Motor: Recv v 4097\r 17-03-02 13:14:56.841 -08 000000116 INF: Y Motor: Status After move finished OK: 17-03-02 13:14:56.841 -08 000000116 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:56.903 -08 000000116 INF: Y Motor: Recv v 0\r 17-03-02 13:14:56.903 -08 000000116 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:56.903 -08 000000116 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:14:56.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:56.965 -08 000000116 INF: Y Motor: Recv v 134217728\r 17-03-02 13:14:56.965 -08 000000116 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:14:56.965 -08 000000116 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:14:56.965 -08 000000116 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:14:57.025 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:57.026 -08 000000116 INF: Y Motor: Recv v 0\r 17-03-02 13:14:57.026 -08 000000116 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:14:57.026 -08 000000116 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:14:57.026 -08 000000116 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:57.088 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:14:57.088 -08 000000116 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:14:57.088 -08 000000116 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:57.153 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:14:57.153 -08 000000116 INF: ====================================== 17-03-02 13:14:57.154 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:57.155 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:14:57.156 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.156 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:14:57.213 -08 000000104 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:14:57.213 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:14:57.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:57.275 -08 000000082 INF: FPGA: Recv TDIYERD 1492168 17-03-02 13:14:57.275 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:14:57.337 -08 000000091 INF: FPGA: Recv ZADCR 31897 17-03-02 13:14:57.337 -08 000000042 INF: At scan end Y pos = 14.922 and Z pos = -0.122. Y moved -48.539 mm 17-03-02 13:14:57.337 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:14:57.338 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:57.400 -08 000000047 INF: FPGA: Recv TDIPULSES 139265 17-03-02 13:14:57.400 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-03-02 13:14:57.400 -08 000000042 INF: TDIScan finished after 12023.595 ms 17-03-02 13:14:57.400 -08 000000042 INF: Image[0]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm) 17-03-02 13:14:57.400 -08 000000042 INF: Image[2]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm) 17-03-02 13:14:57.402 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.437 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.160 um 17-03-02 13:14:57.438 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.439 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:14:57.461 -08 000000088 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:14:57.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.462 -08 000000094 INF: ===================Dither Clean Up Command=================== 17-03-02 13:14:57.462 -08 000000091 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:14:57.462 -08 000000098 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:14:57.462 -08 000000109 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:14:57.463 -08 000000098 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:14:57.463 -08 000000098 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:14:57.463 -08 000000091 INF: ====================================== 17-03-02 13:14:57.463 -08 000000109 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:14:57.463 -08 000000109 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:14:57.463 -08 000000062 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:14:57.463 -08 000000027 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:14:57.464 -08 000000062 INF: FPGA: Xmit ZSEL 0\n 17-03-02 13:14:57.466 -08 000000027 INF: ===================LFT:Extracting coords=================== 17-03-02 13:14:57.492 -08 000000027 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:14:57.493 -08 000000027 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-03-02 13:14:57.494 -08 000000009 INF: ===================LookupFocusTracking=================== 17-03-02 13:14:57.494 -08 000000039 INF: ===================LookupFocusTracking=================== 17-03-02 13:14:57.494 -08 000000010 INF: ===================LookupFocusTracking=================== 17-03-02 13:14:57.494 -08 000000085 INF: ===================LookupFocusTracking=================== 17-03-02 13:14:57.494 -08 000000009 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:14:57.494 -08 000000010 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:14:57.494 -08 000000085 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:14:57.494 -08 000000039 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:14:57.523 -08 000000096 INF: FPGA: Recv ZSTEP 17-03-02 13:14:57.523 -08 000000096 INF: FPGA: Recv ZSEL 17-03-02 13:14:57.523 -08 000000062 INF: FPGA: Xmit ZDACW 39666\n 17-03-02 13:14:57.523 -08 000000109 INF: ====================================== 17-03-02 13:14:57.525 -08 000000098 INF: Y Motor: Recv ok\r 17-03-02 13:14:57.525 -08 000000098 INF: ====================================== 17-03-02 13:14:57.568 -08 000000009 INF: FC:B, C:162,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:14:57.568 -08 000000010 INF: FC:B, C:162,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:14:57.568 -08 000000085 INF: FC:B, C:162,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:14:57.568 -08 000000039 INF: FC:B, C:162,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:14:57.588 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:57.589 -08 000000116 INF: FPGA: Recv ZDACW 17-03-02 13:14:57.589 -08 000000062 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-03-02 13:14:57.590 -08 000000062 INF: FPGA: Xmit TDIBB 0\n 17-03-02 13:14:57.650 -08 000000081 INF: FPGA: Recv TDIBB 17-03-02 13:14:57.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:57.651 -08 000000062 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:14:57.652 -08 000000062 INF: ====================================== 17-03-02 13:14:57.720 -08 000000039 INF: LFT found best fwhm score 2.000016 in 151 ms 17-03-02 13:14:57.720 -08 000000039 INF: LFT found good score at index 7789 with fwhm value 2.000016. Next cycle, cycle 163 starting Z position for top surface is at -0.152 mm FC:B, C:162,L:1,T 17-03-02 13:14:57.720 -08 000000010 INF: LFT found best fwhm score 2.000202 in 152 ms 17-03-02 13:14:57.720 -08 000000010 INF: LFT found good score at index 7333 with fwhm value 2.000202. Next cycle, cycle 163 starting Z position for top surface is at -0.152 mm FC:B, C:162,L:1,T 17-03-02 13:14:57.720 -08 000000085 INF: LFT found best fwhm score 2.231426 in 152 ms 17-03-02 13:14:57.720 -08 000000085 INF: LFT found good score at index 4605 with fwhm value 2.231426. Next cycle, cycle 163 starting Z position for top surface is at -0.153 mm FC:B, C:162,L:1,T 17-03-02 13:14:57.720 -08 000000039 INF: ===================LookupFocusTracking=================== 17-03-02 13:14:57.720 -08 000000010 INF: ===================LookupFocusTracking=================== 17-03-02 13:14:57.720 -08 000000085 INF: ===================LookupFocusTracking=================== 17-03-02 13:14:57.720 -08 000000039 INF: ====================================== 17-03-02 13:14:57.720 -08 000000085 INF: ====================================== 17-03-02 13:14:57.721 -08 000000009 INF: LFT found best fwhm score 2.012213 in 152 ms 17-03-02 13:14:57.721 -08 000000009 INF: LFT found good score at index 4281 with fwhm value 2.012213. Next cycle, cycle 163 starting Z position for top surface is at -0.153 mm FC:B, C:162,L:1,T 17-03-02 13:14:57.721 -08 000000010 INF: ====================================== 17-03-02 13:14:57.721 -08 000000009 INF: ===================LookupFocusTracking=================== 17-03-02 13:14:57.721 -08 000000009 INF: ====================================== 17-03-02 13:14:57.723 -08 000000027 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:14:57.724 -08 000000027 INF: LFT weighted average best Z for top surface is at -0.152mm FC:B, C:162,L:1,T 17-03-02 13:14:57.724 -08 000000027 INF: ====================================== 17-03-02 13:14:57.726 -08 000000094 INF: ====================================== 17-03-02 13:14:57.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:14:57.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:14:57.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.729 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:14:57.729 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.729 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:14:57.729 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.729 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-03-02 13:14:57.730 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-03-02 13:14:57.731 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Dispensing port PortC, Waiting for image analysis=================== 17-03-02 13:14:57.731 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Dispensing port PortC=================== 17-03-02 13:14:57.731 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Waiting for image analysis=================== 17-03-02 13:14:57.731 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-03-02 13:14:57.754 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 17-03-02 13:14:57.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:14:57.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-03-02 13:14:57.755 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:14:57.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-03-02 13:14:57.755 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-03-02 13:14:57.755 -08 000000042 INF: Transformed XStagePosition from 69.73964 mm to 69.6927192807198 mm. 17-03-02 13:14:57.767 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5699943559021 mm. 17-03-02 13:14:57.767 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3699943559021 mm. 17-03-02 13:14:57.767 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4607443559021 mm. 17-03-02 13:14:57.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:14:57.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:14:57.770 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -151.3 um, section = A_1 17-03-02 13:14:57.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:14:57.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:14:57.889 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1101 Request: {"Cycle":162,"Lane":1,"Tile":1101,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF208","HCSMMF268","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:57.891 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:14:57.891 -08 000000097 INF: ===================Move X,Y=================== 17-03-02 13:14:57.891 -08 000000082 INF: ===================MoveEmissionFilters=================== 17-03-02 13:14:57.891 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-03-02 13:14:57.892 -08 000000053 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:14:57.892 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:14:57.892 -08 000000097 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:14:57.894 -08 000000132 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:14:57.894 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-03-02 13:14:57.896 -08 000000132 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:14:57.896 -08 000000029 INF: ===================Move X Motor without settling=================== 17-03-02 13:14:57.896 -08 000000038 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:14:57.897 -08 000000065 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:57.897 -08 000000029 INF: X Motor: Xmit PR VM\n 17-03-02 13:14:57.897 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:14:57.897 -08 000000038 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:14:57.898 -08 000000065 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:57.898 -08 000000044 INF: ===================Move Y Motor without settling=================== 17-03-02 13:14:57.898 -08 000000044 INF: Y Motor: Moving to 64.5700 mm @25.000 mm/sec, started at 14.9217 mm 17-03-02 13:14:57.899 -08 000000044 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:14:57.899 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:14:57.899 -08 000000065 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:14:57.899 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:14:57.899 -08 000000027 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:14:57.899 -08 000000065 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:14:57.900 -08 000000065 INF: FPGA: Xmit ZSEL 3\n 17-03-02 13:14:57.900 -08 000000115 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:14:57.900 -08 000000115 INF: ====================================== 17-03-02 13:14:57.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:57.901 -08 000000027 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:14:57.902 -08 000000066 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:14:57.903 -08 000000104 INF: ===================Camera Arm TDI=================== 17-03-02 13:14:57.903 -08 000000066 INF: ====================================== 17-03-02 13:14:57.904 -08 000000115 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:14:57.904 -08 000000104 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:14:57.905 -08 000000131 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:14:57.905 -08 000000115 INF: ====================================== 17-03-02 13:14:57.905 -08 000000104 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:14:57.906 -08 000000131 INF: ====================================== 17-03-02 13:14:57.906 -08 000000066 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:14:57.907 -08 000000066 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:14:57.907 -08 000000066 INF: ====================================== 17-03-02 13:14:57.909 -08 000000038 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:14:57.910 -08 000000038 INF: ====================================== 17-03-02 13:14:57.911 -08 000000115 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:14:57.911 -08 000000039 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:14:57.912 -08 000000039 INF: ====================================== 17-03-02 13:14:57.912 -08 000000115 INF: ====================================== 17-03-02 13:14:57.916 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:14:57.916 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:14:57.916 -08 000000038 INF: ====================================== 17-03-02 13:14:57.919 -08 000000027 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:14:57.920 -08 000000030 INF: ====================================== 17-03-02 13:14:57.923 -08 000000132 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:14:57.923 -08 000000027 INF: ====================================== 17-03-02 13:14:57.926 -08 000000132 INF: ====================================== 17-03-02 13:14:57.950 -08 000000082 INF: ====================================== 17-03-02 13:14:57.970 -08 000000096 INF: FPGA: Recv ZSEL 17-03-02 13:14:57.972 -08 000000065 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:14:57.972 -08 000000065 INF: FPGA: Xmit TDIBB 1\n 17-03-02 13:14:57.980 -08 000000044 INF: Y Motor: Recv ok\r 17-03-02 13:14:57.980 -08 000000044 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:14:57.981 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:14:58.000 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:58.006 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1105 Request: {"Cycle":162,"Lane":1,"Tile":1105,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF182","HCSMMF236","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.011 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1104 Request: {"Cycle":162,"Lane":1,"Tile":1104,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF197","HCSMMF277","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.012 -08 000000029 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:14:58.012 -08 000000029 INF: X Motor: Xmit PR VI\n 17-03-02 13:14:58.023 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1102 Request: {"Cycle":162,"Lane":1,"Tile":1102,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF269","HCSMMF209","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.026 -08 000000044 INF: Y Motor: Recv ok\r 17-03-02 13:14:58.026 -08 000000044 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:14:58.027 -08 000000074 INF: FPGA: Recv TDIBB 17-03-02 13:14:58.028 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1103 Request: {"Cycle":162,"Lane":1,"Tile":1103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF203","HCSMMF226","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.029 -08 000000065 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:14:58.032 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1106 Request: {"Cycle":162,"Lane":1,"Tile":1106,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF253","HCSMMF186","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.032 -08 000000065 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:14:58.033 -08 000000065 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:58.034 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1115 Request: {"Cycle":162,"Lane":1,"Tile":1115,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF223","HCSMMF265","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.035 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1112 Request: {"Cycle":162,"Lane":1,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF271","HCSMMF276","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.037 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1109 Request: {"Cycle":162,"Lane":1,"Tile":1109,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF217","HCSMMF207","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.038 -08 000000065 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-03-02 13:14:58.038 -08 000000065 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-03-02 13:14:58.038 -08 000000065 INF: FPGA: Xmit ZSTEP 1792263\n 17-03-02 13:14:58.039 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1110 Request: {"Cycle":162,"Lane":1,"Tile":1110,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF187","HCSMMF214","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.040 -08 000000122 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1108 Request: {"Cycle":162,"Lane":1,"Tile":1108,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF255","HCSMMF202","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.040 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1114 Request: {"Cycle":162,"Lane":1,"Tile":1114,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF247","HCSMMF218","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.041 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1107 Request: {"Cycle":162,"Lane":1,"Tile":1107,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF240","HCSMMF251","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.042 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1117 Request: {"Cycle":162,"Lane":1,"Tile":1117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF272","HCSMMF231","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.044 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1123 Request: {"Cycle":162,"Lane":1,"Tile":1123,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF261","HCSMMF264","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.044 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1111 Request: {"Cycle":162,"Lane":1,"Tile":1111,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF192","HCSMMF248","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.046 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1122 Request: {"Cycle":162,"Lane":1,"Tile":1122,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF266","HCSMMF237","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.046 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1118 Request: {"Cycle":162,"Lane":1,"Tile":1118,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF189","HCSMMF184","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.047 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1126 Request: {"Cycle":162,"Lane":1,"Tile":1126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF242","HCSMMF196","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.048 -08 000000131 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1120 Request: {"Cycle":162,"Lane":1,"Tile":1120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF194","HCSMMF180","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.049 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1121 Request: {"Cycle":162,"Lane":1,"Tile":1121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF211","HCSMMF206","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.050 -08 000000116 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1116 Request: {"Cycle":162,"Lane":1,"Tile":1116,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF257","HCSMMF179","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.051 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1125 Request: {"Cycle":162,"Lane":1,"Tile":1125,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF262","HCSMMF263","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.052 -08 000000119 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1127 Request: {"Cycle":162,"Lane":1,"Tile":1127,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF284","HCSMMF200","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.053 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1128 Request: {"Cycle":162,"Lane":1,"Tile":1128,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF281","HCSMMF224","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.054 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1124 Request: {"Cycle":162,"Lane":1,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF228","HCSMMF245","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.056 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1119 Request: {"Cycle":162,"Lane":1,"Tile":1119,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF244","HCSMMF280","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.057 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1113 Request: {"Cycle":162,"Lane":1,"Tile":1113,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF286","HCSMMF246","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:14:58.069 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:14:58.071 -08 000000029 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:14:58.071 -08 000000029 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:14:58.071 -08 000000029 INF: X Motor: Moving to 69.6927 mm @15.000 mm/sec, started at 68.5923 mm 17-03-02 13:14:58.071 -08 000000029 INF: X Motor: Xmit MA 4380\n 17-03-02 13:14:58.076 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-03-02 13:14:58.088 -08 000000072 INF: FPGA: Recv ZSTEP 17-03-02 13:14:58.088 -08 000000065 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:58.090 -08 000000044 INF: Y Motor: Recv v 0\r 17-03-02 13:14:58.090 -08 000000044 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:14:58.090 -08 000000044 INF: Y Motor: Set target position to 5956999 encoder counts 17-03-02 13:14:58.090 -08 000000044 INF: Y Motor: Xmit s r0xca 5956999\r 17-03-02 13:14:58.090 -08 000000065 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:14:58.090 -08 000000065 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:58.092 -08 000000065 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:14:58.092 -08 000000065 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:14:58.092 -08 000000065 INF: Z Motor: Arming to move to -0.1113 mm 17-03-02 13:14:58.092 -08 000000065 INF: FPGA: Xmit ZYT 6436999 4\n 17-03-02 13:14:58.136 -08 000000029 INF: X Motor: Recv MA 4380\r\n> 17-03-02 13:14:58.136 -08 000000029 INF: X Motor: WaitUntilStopped 60073 17-03-02 13:14:58.149 -08 000000047 INF: FPGA: Recv ZYT 17-03-02 13:14:58.149 -08 000000065 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492167 enc / 14.922 mm / ) = 6436999 enc / 64.370 mm 17-03-02 13:14:58.149 -08 000000065 INF: FPGA: Xmit ZARM 29180\n 17-03-02 13:14:58.151 -08 000000044 INF: Y Motor: Recv ok\r 17-03-02 13:14:58.151 -08 000000044 INF: Y Motor: Start the move command 17-03-02 13:14:58.151 -08 000000044 INF: Y Motor: Xmit t 1\r 17-03-02 13:14:58.211 -08 000000038 INF: FPGA: Recv ZARM 17-03-02 13:14:58.211 -08 000000065 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9351 ms 17-03-02 13:14:58.211 -08 000000065 INF: Z Motor: ArmAbsStepped took 118.6802 ms 17-03-02 13:14:58.211 -08 000000065 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:14:58.213 -08 000000044 INF: Y Motor: Recv ok\r 17-03-02 13:14:58.213 -08 000000065 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:58.213 -08 000000044 INF: Y Motor: WaitUntilStopped 61986 17-03-02 13:14:58.213 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:58.214 -08 000000065 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:14:58.215 -08 000000065 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:58.216 -08 000000065 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:14:58.217 -08 000000065 INF: ===================TDI Scan Setup=================== 17-03-02 13:14:58.218 -08 000000065 INF: ====================================== 17-03-02 13:14:58.239 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:14:58.239 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-03-02 13:14:58.251 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:58.308 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:14:58.313 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-03-02 13:14:58.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:14:58.335 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)=================== 17-03-02 13:14:58.335 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-02 13:14:58.336 -08 000000044 INF: Y Motor: Unshifted Position: 1072429 17-03-02 13:14:58.386 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:58.457 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:14:58.463 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-03-02 13:14:58.500 -08 000000104 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:14:58.500 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:14:58.500 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:14:58.512 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:58.515 -08 000000104 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:14:58.517 -08 000000104 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:14:58.558 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:14:58.563 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-03-02 13:14:58.650 -08 000000044 INF: Y Motor: Unshifted Position: 1784652 17-03-02 13:14:58.654 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:14:58.700 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:58.758 -08 000000029 INF: X Motor: Xmit PR ER\n 17-03-02 13:14:58.822 -08 000000029 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:14:58.822 -08 000000029 INF: X Motor: Moved to 69.6958 after 686 ms 17-03-02 13:14:58.822 -08 000000029 INF: ====================================== 17-03-02 13:14:58.823 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:58.935 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-03-02 13:14:58.961 -08 000000044 INF: Y Motor: Unshifted Position: 2560517 17-03-02 13:14:59.011 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:59.125 -08 000000104 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:14:59.125 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:14:59.125 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:14:59.140 -08 000000104 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:14:59.142 -08 000000104 INF: ===================Camera Arm TDI=================== 17-03-02 13:14:59.143 -08 000000104 INF: ====================================== 17-03-02 13:14:59.144 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:59.144 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:14:59.145 -08 000000053 INF: ====================================== 17-03-02 13:14:59.274 -08 000000044 INF: Y Motor: Unshifted Position: 3340475 17-03-02 13:14:59.324 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:59.435 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-03-02 13:14:59.449 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:59.492 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:59.584 -08 000000044 INF: Y Motor: Unshifted Position: 4121367 17-03-02 13:14:59.592 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:59.634 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:59.677 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:14:59.760 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:59.897 -08 000000044 INF: Y Motor: Unshifted Position: 4903810 17-03-02 13:14:59.927 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:14:59.947 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:14:59.990 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:14:59.990 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:14:59.990 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 17-03-02 13:15:00.072 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:00.210 -08 000000044 INF: Y Motor: Unshifted Position: 5678484 17-03-02 13:15:00.260 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:00.344 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:00.344 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:00.345 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:00.345 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-03-02 13:15:00.346 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-03-02 13:15:00.346 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°=================== 17-03-02 13:15:00.385 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:00.520 -08 000000044 INF: Y Motor: Unshifted Position: 5957000 17-03-02 13:15:00.520 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:00.520 -08 000000044 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:00.533 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-03-02 13:15:00.533 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-03-02 13:15:00.534 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-03-02 13:15:00.535 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-03-02 13:15:00.535 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:00.535 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:00.536 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:00.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:00.584 -08 000000044 INF: Y Motor: Recv v 0\r 17-03-02 13:15:00.584 -08 000000044 INF: Y Motor: Moved to 64.5700 after 2371 ms 17-03-02 13:15:00.584 -08 000000044 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:00.613 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:00.613 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)=================== 17-03-02 13:15:00.613 -08 000000018 INF: Valve A1: Go to position 7 17-03-02 13:15:00.613 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:15:00.645 -08 000000044 INF: Y Motor: Recv v 4096\r 17-03-02 13:15:00.645 -08 000000044 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:00.645 -08 000000044 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:00.677 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 8\r 17-03-02 13:15:00.677 -08 000000018 INF: Valve A1: 25.475 seconds since last move, > 10.000 seconds required between moves 17-03-02 13:15:00.677 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 8 to 7 17-03-02 13:15:00.677 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC7\r 17-03-02 13:15:00.677 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-03-02 13:15:00.677 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:15:00.709 -08 000000044 INF: Y Motor: Recv v 0\r 17-03-02 13:15:00.709 -08 000000044 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:00.709 -08 000000044 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:00.774 -08 000000044 INF: Y Motor: Recv v 402653184\r 17-03-02 13:15:00.774 -08 000000044 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:15:00.774 -08 000000044 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:00.774 -08 000000044 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:00.833 -08 000000044 INF: Y Motor: Recv v 0\r 17-03-02 13:15:00.833 -08 000000044 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:00.833 -08 000000044 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:00.833 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:00.897 -08 000000044 INF: Y Motor: Recv ok\r 17-03-02 13:15:00.897 -08 000000044 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:00.897 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:00.926 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 7\r 17-03-02 13:15:00.926 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:00.926 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 17-03-02 13:15:00.958 -08 000000044 INF: Y Motor: Recv ok\r 17-03-02 13:15:00.958 -08 000000044 INF: ====================================== 17-03-02 13:15:00.959 -08 000000097 INF: ===================Move X,Y=================== 17-03-02 13:15:00.960 -08 000000097 INF: ====================================== 17-03-02 13:15:00.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:00.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:00.962 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-03-02 13:15:00.962 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-03-02 13:15:01.022 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:15:01.022 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-03-02 13:15:01.035 -08 000000085 INF: FPGA: Recv ZFREQCL 17-03-02 13:15:01.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:15:01.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:01.036 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:01.098 -08 000000038 INF: FPGA: Recv TDIYERD 6457000 17-03-02 13:15:01.098 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457000 counts (64.570 mm) 17-03-02 13:15:01.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:01.099 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:01.100 -08 000000009 INF: ===================TDI FPGA Arm=================== 17-03-02 13:15:01.100 -08 000000109 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:15:01.100 -08 000000109 INF: ====================================== 17-03-02 13:15:01.101 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:01.101 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:15:01.101 -08 000000009 INF: FPGA: Xmit TDIYPOS 6346074\n 17-03-02 13:15:01.159 -08 000000029 INF: FPGA: Recv TDIYPOS 17-03-02 13:15:01.159 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:01.161 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:15:01.161 -08 000000009 INF: FPGA: Xmit TDIYARM3 139264 6436999 1 1\n 17-03-02 13:15:01.222 -08 000000100 INF: FPGA: Recv TDIYARM3 17-03-02 13:15:01.222 -08 000000009 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:01.223 -08 000000009 INF: ===================TDI FPGA Arm=================== 17-03-02 13:15:01.224 -08 000000009 INF: ====================================== 17-03-02 13:15:01.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:01.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:01.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:01.227 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:01.228 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:01.228 -08 000000105 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:15:01.229 -08 000000105 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:15:01.229 -08 000000068 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:15:01.229 -08 000000105 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:15:01.229 -08 000000105 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:15:01.229 -08 000000105 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:15:01.229 -08 000000068 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:15:01.229 -08 000000068 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:15:01.229 -08 000000068 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:15:01.233 -08 000000068 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:15:01.533 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:01.533 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:01.534 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:01.597 -08 000000069 INF: FPGA: Recv EX1MV 17-03-02 13:15:01.597 -08 000000069 INF: FPGA: Recv EX2MV 17-03-02 13:15:01.597 -08 000000068 INF: Excitation Filter 2: Moved -107 steps in 367.0318 ms 17-03-02 13:15:01.597 -08 000000105 INF: Excitation Filter 1: Moved -107 steps in 367.1785 ms 17-03-02 13:15:01.597 -08 000000105 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.4983 ms 17-03-02 13:15:01.597 -08 000000105 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.5773 ms 17-03-02 13:15:01.597 -08 000000068 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.215 ms 17-03-02 13:15:01.597 -08 000000068 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.4134 ms 17-03-02 13:15:01.597 -08 000000105 INF: ====================================== 17-03-02 13:15:01.598 -08 000000068 INF: ====================================== 17-03-02 13:15:01.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:01.601 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:01.602 -08 000000028 INF: ===================Camera TDI=================== 17-03-02 13:15:01.602 -08 000000102 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:01.602 -08 000000033 INF: ===================FPGA Z Wait=================== 17-03-02 13:15:01.602 -08 000000033 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:15:01.602 -08 000000053 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:01.602 -08 000000028 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:15:01.603 -08 000000102 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:15:01.603 -08 000000053 INF: Y Motor: Moving to 14.9217 mm @6.500 mm/sec, started at 64.5700 mm 17-03-02 13:15:01.603 -08 000000053 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:01.603 -08 000000053 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:01.603 -08 000000047 INF: ===================Camera TDI=================== 17-03-02 13:15:01.604 -08 000000078 INF: ===================Camera TDI=================== 17-03-02 13:15:01.605 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:01.605 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:01.606 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:01.606 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:01.606 -08 000000102 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:15:01.613 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:01.621 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000 17-03-02 13:15:01.645 -08 000000053 INF: Y Motor: Recv ok\r 17-03-02 13:15:01.645 -08 000000053 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:01.645 -08 000000053 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:01.708 -08 000000053 INF: Y Motor: Recv ok\r 17-03-02 13:15:01.708 -08 000000053 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:01.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:15:01.759 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:01.759 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:01.759 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:01.760 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:01.805 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-03-02 13:15:01.805 -08 000000018 INF: Current Position of Pump is: 0 17-03-02 13:15:01.806 -08 000000053 INF: Y Motor: Recv v 0\r 17-03-02 13:15:01.806 -08 000000053 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:01.806 -08 000000053 INF: Y Motor: Set target position to 992166 encoder counts 17-03-02 13:15:01.806 -08 000000053 INF: Y Motor: Xmit s r0xca 992166\r 17-03-02 13:15:01.866 -08 000000053 INF: Y Motor: Recv ok\r 17-03-02 13:15:01.866 -08 000000053 INF: Y Motor: Start the move command 17-03-02 13:15:01.866 -08 000000053 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:01.905 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-03-02 13:15:01.909 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:01.909 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:01.910 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:01.910 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:01.927 -08 000000053 INF: Y Motor: Recv ok\r 17-03-02 13:15:01.927 -08 000000053 INF: Y Motor: WaitUntilStopped 67638 17-03-02 13:15:01.927 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:01.987 -08 000000071 INF: FPGA: Recv ZWAIT 17-03-02 13:15:01.988 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:01.988 -08 000000033 INF: ====================================== 17-03-02 13:15:02.052 -08 000000053 INF: Y Motor: Unshifted Position: 5895795 17-03-02 13:15:02.059 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:15:02.059 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:15:02.059 -08 000000047 INF: ===================Camera #2 Frame #4=================== 17-03-02 13:15:02.060 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:15:02.060 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:15:02.060 -08 000000078 INF: ===================Camera #0 Frame #4=================== 17-03-02 13:15:02.088 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:02.102 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:02.174 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:02.222 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-03-02 13:15:02.222 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-03-02 13:15:02.222 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-03-02 13:15:02.222 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-03-02 13:15:02.222 -08 000000047 INF: ===================Camera #2 Frame #10=================== 17-03-02 13:15:02.222 -08 000000078 INF: ===================Camera #0 Frame #10=================== 17-03-02 13:15:02.225 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:02.366 -08 000000053 INF: Y Motor: Unshifted Position: 5691051 17-03-02 13:15:02.391 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16. 17-03-02 13:15:02.391 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16 17-03-02 13:15:02.391 -08 000000078 INF: ===================Camera #0 Frame #16=================== 17-03-02 13:15:02.391 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16. 17-03-02 13:15:02.392 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16 17-03-02 13:15:02.400 -08 000000047 INF: ===================Camera #2 Frame #16=================== 17-03-02 13:15:02.416 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:02.426 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:02.487 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:02.538 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:02.559 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 21, frameCount = 22. 17-03-02 13:15:02.559 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 22 17-03-02 13:15:02.559 -08 000000078 INF: ===================Camera #0 Frame #22=================== 17-03-02 13:15:02.570 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-03-02 13:15:02.570 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-03-02 13:15:02.570 -08 000000047 INF: ===================Camera #2 Frame #23=================== 17-03-02 13:15:02.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-03-02 13:15:02.673 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:02.674 -08 000000053 INF: Y Motor: Unshifted Position: 5490637 17-03-02 13:15:02.724 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:02.736 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-03-02 13:15:02.736 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-03-02 13:15:02.736 -08 000000078 INF: ===================Camera #0 Frame #29=================== 17-03-02 13:15:02.743 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-03-02 13:15:02.743 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-03-02 13:15:02.743 -08 000000047 INF: ===================Camera #2 Frame #29=================== 17-03-02 13:15:02.773 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:02.800 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:02.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB=================== 17-03-02 13:15:02.851 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:02.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP11904R\r 17-03-02 13:15:02.907 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-03-02 13:15:02.907 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-03-02 13:15:02.907 -08 000000078 INF: ===================Camera #0 Frame #35=================== 17-03-02 13:15:02.915 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-03-02 13:15:02.915 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-03-02 13:15:02.915 -08 000000047 INF: ===================Camera #2 Frame #36=================== 17-03-02 13:15:02.986 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:02.987 -08 000000053 INF: Y Motor: Unshifted Position: 5287180 17-03-02 13:15:03.037 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:03.080 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:15:03.080 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:15:03.080 -08 000000078 INF: ===================Camera #0 Frame #42=================== 17-03-02 13:15:03.086 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:03.092 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:15:03.092 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:15:03.092 -08 000000047 INF: ===================Camera #2 Frame #42=================== 17-03-02 13:15:03.161 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:03.174 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:03.263 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-03-02 13:15:03.263 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-03-02 13:15:03.263 -08 000000078 INF: ===================Camera #0 Frame #48=================== 17-03-02 13:15:03.267 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-03-02 13:15:03.267 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-03-02 13:15:03.267 -08 000000047 INF: ===================Camera #2 Frame #49=================== 17-03-02 13:15:03.299 -08 000000053 INF: Y Motor: Unshifted Position: 5084165 17-03-02 13:15:03.349 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:03.424 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:03.431 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-03-02 13:15:03.431 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-03-02 13:15:03.431 -08 000000078 INF: ===================Camera #0 Frame #55=================== 17-03-02 13:15:03.440 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-03-02 13:15:03.440 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-03-02 13:15:03.440 -08 000000047 INF: ===================Camera #2 Frame #55=================== 17-03-02 13:15:03.475 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:03.485 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:03.603 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:15:03.603 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:15:03.603 -08 000000078 INF: ===================Camera #0 Frame #61=================== 17-03-02 13:15:03.610 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:15:03.610 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:15:03.610 -08 000000047 INF: ===================Camera #2 Frame #61=================== 17-03-02 13:15:03.612 -08 000000053 INF: Y Motor: Unshifted Position: 4882003 17-03-02 13:15:03.662 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:03.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:03.772 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:15:03.772 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:15:03.772 -08 000000078 INF: ===================Camera #0 Frame #67=================== 17-03-02 13:15:03.779 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:15:03.779 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:15:03.779 -08 000000047 INF: ===================Camera #2 Frame #67=================== 17-03-02 13:15:03.786 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:03.797 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:03.922 -08 000000053 INF: Y Motor: Unshifted Position: 4678997 17-03-02 13:15:03.940 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-03-02 13:15:03.940 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-03-02 13:15:03.940 -08 000000078 INF: ===================Camera #0 Frame #73=================== 17-03-02 13:15:03.948 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-03-02 13:15:03.948 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-03-02 13:15:03.948 -08 000000047 INF: ===================Camera #2 Frame #74=================== 17-03-02 13:15:03.972 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:04.047 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:04.098 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:04.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:04.109 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:15:04.109 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:15:04.109 -08 000000078 INF: ===================Camera #0 Frame #80=================== 17-03-02 13:15:04.121 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:15:04.121 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:15:04.121 -08 000000047 INF: ===================Camera #2 Frame #80=================== 17-03-02 13:15:04.234 -08 000000053 INF: Y Motor: Unshifted Position: 4474242 17-03-02 13:15:04.281 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:15:04.281 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:15:04.281 -08 000000078 INF: ===================Camera #0 Frame #86=================== 17-03-02 13:15:04.284 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:04.291 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:15:04.291 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:15:04.291 -08 000000047 INF: ===================Camera #2 Frame #86=================== 17-03-02 13:15:04.358 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:04.411 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:04.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:04.449 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:15:04.449 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:15:04.449 -08 000000078 INF: ===================Camera #0 Frame #92=================== 17-03-02 13:15:04.460 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:15:04.460 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:15:04.460 -08 000000047 INF: ===================Camera #2 Frame #92=================== 17-03-02 13:15:04.547 -08 000000053 INF: Y Motor: Unshifted Position: 4271871 17-03-02 13:15:04.597 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:04.617 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-03-02 13:15:04.617 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-03-02 13:15:04.617 -08 000000078 INF: ===================Camera #0 Frame #98=================== 17-03-02 13:15:04.629 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-03-02 13:15:04.629 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-03-02 13:15:04.629 -08 000000047 INF: ===================Camera #2 Frame #99=================== 17-03-02 13:15:04.672 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:04.723 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:04.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:04.785 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104. 17-03-02 13:15:04.785 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104 17-03-02 13:15:04.785 -08 000000078 INF: ===================Camera #0 Frame #104=================== 17-03-02 13:15:04.801 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-03-02 13:15:04.801 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-03-02 13:15:04.801 -08 000000047 INF: ===================Camera #2 Frame #105=================== 17-03-02 13:15:04.860 -08 000000053 INF: Y Motor: Unshifted Position: 4071017 17-03-02 13:15:04.910 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:04.953 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:15:04.953 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:15:04.953 -08 000000078 INF: ===================Camera #0 Frame #111=================== 17-03-02 13:15:04.970 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:15:04.970 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:15:04.970 -08 000000047 INF: ===================Camera #2 Frame #111=================== 17-03-02 13:15:04.985 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:05.033 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:05.044 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:05.124 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-03-02 13:15:05.124 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-03-02 13:15:05.124 -08 000000078 INF: ===================Camera #0 Frame #117=================== 17-03-02 13:15:05.139 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-03-02 13:15:05.139 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-03-02 13:15:05.139 -08 000000047 INF: ===================Camera #2 Frame #117=================== 17-03-02 13:15:05.174 -08 000000053 INF: Y Motor: Unshifted Position: 3868001 17-03-02 13:15:05.224 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:05.292 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-03-02 13:15:05.292 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-03-02 13:15:05.292 -08 000000078 INF: ===================Camera #0 Frame #123=================== 17-03-02 13:15:05.294 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:05.308 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-03-02 13:15:05.308 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-03-02 13:15:05.308 -08 000000047 INF: ===================Camera #2 Frame #124=================== 17-03-02 13:15:05.347 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:05.356 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:05.460 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129. 17-03-02 13:15:05.460 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129 17-03-02 13:15:05.460 -08 000000078 INF: ===================Camera #0 Frame #129=================== 17-03-02 13:15:05.480 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:15:05.480 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:15:05.480 -08 000000047 INF: ===================Camera #2 Frame #130=================== 17-03-02 13:15:05.484 -08 000000053 INF: Y Motor: Unshifted Position: 3665202 17-03-02 13:15:05.534 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:05.606 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:05.628 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135. 17-03-02 13:15:05.628 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135 17-03-02 13:15:05.628 -08 000000078 INF: ===================Camera #0 Frame #135=================== 17-03-02 13:15:05.649 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-03-02 13:15:05.649 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-03-02 13:15:05.649 -08 000000047 INF: ===================Camera #2 Frame #136=================== 17-03-02 13:15:05.657 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:05.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:05.796 -08 000000053 INF: Y Motor: Unshifted Position: 3460883 17-03-02 13:15:05.797 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-03-02 13:15:05.797 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-03-02 13:15:05.797 -08 000000078 INF: ===================Camera #0 Frame #142=================== 17-03-02 13:15:05.818 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-03-02 13:15:05.818 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-03-02 13:15:05.818 -08 000000047 INF: ===================Camera #2 Frame #142=================== 17-03-02 13:15:05.846 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:05.920 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:05.969 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148. 17-03-02 13:15:05.969 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148 17-03-02 13:15:05.969 -08 000000078 INF: ===================Camera #0 Frame #148=================== 17-03-02 13:15:05.970 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:05.981 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:05.989 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-03-02 13:15:05.989 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-03-02 13:15:05.989 -08 000000047 INF: ===================Camera #2 Frame #149=================== 17-03-02 13:15:06.106 -08 000000053 INF: Y Motor: Unshifted Position: 3258525 17-03-02 13:15:06.137 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154. 17-03-02 13:15:06.137 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154 17-03-02 13:15:06.137 -08 000000078 INF: ===================Camera #0 Frame #154=================== 17-03-02 13:15:06.156 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:06.163 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:15:06.163 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:15:06.163 -08 000000047 INF: ===================Camera #2 Frame #155=================== 17-03-02 13:15:06.231 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:06.282 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:06.293 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:06.307 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160. 17-03-02 13:15:06.307 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160 17-03-02 13:15:06.307 -08 000000078 INF: ===================Camera #0 Frame #160=================== 17-03-02 13:15:06.334 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-03-02 13:15:06.334 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-03-02 13:15:06.334 -08 000000047 INF: ===================Camera #2 Frame #161=================== 17-03-02 13:15:06.420 -08 000000053 INF: Y Motor: Unshifted Position: 3054426 17-03-02 13:15:06.470 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:06.477 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167. 17-03-02 13:15:06.477 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167 17-03-02 13:15:06.477 -08 000000078 INF: ===================Camera #0 Frame #167=================== 17-03-02 13:15:06.504 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:15:06.504 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:15:06.504 -08 000000047 INF: ===================Camera #2 Frame #168=================== 17-03-02 13:15:06.543 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:06.594 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:06.605 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:06.650 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173. 17-03-02 13:15:06.650 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173 17-03-02 13:15:06.650 -08 000000078 INF: ===================Camera #0 Frame #173=================== 17-03-02 13:15:06.678 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:15:06.678 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:15:06.678 -08 000000047 INF: ===================Camera #2 Frame #174=================== 17-03-02 13:15:06.731 -08 000000053 INF: Y Motor: Unshifted Position: 2852711 17-03-02 13:15:06.781 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:06.820 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179. 17-03-02 13:15:06.820 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179 17-03-02 13:15:06.820 -08 000000078 INF: ===================Camera #0 Frame #179=================== 17-03-02 13:15:06.849 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-03-02 13:15:06.849 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-03-02 13:15:06.849 -08 000000047 INF: ===================Camera #2 Frame #180=================== 17-03-02 13:15:06.855 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:06.907 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:06.918 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:06.990 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186. 17-03-02 13:15:06.990 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186 17-03-02 13:15:06.990 -08 000000078 INF: ===================Camera #0 Frame #186=================== 17-03-02 13:15:07.019 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:15:07.019 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:15:07.019 -08 000000047 INF: ===================Camera #2 Frame #187=================== 17-03-02 13:15:07.044 -08 000000053 INF: Y Motor: Unshifted Position: 2650567 17-03-02 13:15:07.094 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:07.163 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192. 17-03-02 13:15:07.163 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192 17-03-02 13:15:07.163 -08 000000078 INF: ===================Camera #0 Frame #192=================== 17-03-02 13:15:07.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:07.193 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:15:07.193 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:15:07.193 -08 000000047 INF: ===================Camera #2 Frame #193=================== 17-03-02 13:15:07.219 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:07.230 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:07.333 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198. 17-03-02 13:15:07.333 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198 17-03-02 13:15:07.333 -08 000000078 INF: ===================Camera #0 Frame #198=================== 17-03-02 13:15:07.354 -08 000000053 INF: Y Motor: Unshifted Position: 2446896 17-03-02 13:15:07.364 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-03-02 13:15:07.364 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-03-02 13:15:07.364 -08 000000047 INF: ===================Camera #2 Frame #199=================== 17-03-02 13:15:07.404 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:07.480 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:07.503 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205. 17-03-02 13:15:07.503 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205 17-03-02 13:15:07.503 -08 000000078 INF: ===================Camera #0 Frame #205=================== 17-03-02 13:15:07.530 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:07.534 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-03-02 13:15:07.534 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-03-02 13:15:07.534 -08 000000047 INF: ===================Camera #2 Frame #206=================== 17-03-02 13:15:07.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:07.667 -08 000000053 INF: Y Motor: Unshifted Position: 2243447 17-03-02 13:15:07.676 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211. 17-03-02 13:15:07.676 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211 17-03-02 13:15:07.676 -08 000000078 INF: ===================Camera #0 Frame #211=================== 17-03-02 13:15:07.706 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-03-02 13:15:07.706 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-03-02 13:15:07.706 -08 000000047 INF: ===================Camera #2 Frame #212=================== 17-03-02 13:15:07.717 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:07.792 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:07.843 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:07.846 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217. 17-03-02 13:15:07.846 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217 17-03-02 13:15:07.846 -08 000000078 INF: ===================Camera #0 Frame #217=================== 17-03-02 13:15:07.853 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:07.877 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-03-02 13:15:07.877 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-03-02 13:15:07.877 -08 000000047 INF: ===================Camera #2 Frame #218=================== 17-03-02 13:15:07.980 -08 000000053 INF: Y Motor: Unshifted Position: 2041084 17-03-02 13:15:08.016 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223. 17-03-02 13:15:08.016 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223 17-03-02 13:15:08.016 -08 000000078 INF: ===================Camera #0 Frame #223=================== 17-03-02 13:15:08.030 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:08.048 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-03-02 13:15:08.048 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-03-02 13:15:08.048 -08 000000047 INF: ===================Camera #2 Frame #225=================== 17-03-02 13:15:08.103 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:08.154 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:08.166 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:08.186 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230. 17-03-02 13:15:08.186 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230 17-03-02 13:15:08.186 -08 000000078 INF: ===================Camera #0 Frame #230=================== 17-03-02 13:15:08.222 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-03-02 13:15:08.222 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-03-02 13:15:08.222 -08 000000047 INF: ===================Camera #2 Frame #231=================== 17-03-02 13:15:08.291 -08 000000053 INF: Y Motor: Unshifted Position: 1837627 17-03-02 13:15:08.341 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:08.359 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236. 17-03-02 13:15:08.359 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236 17-03-02 13:15:08.359 -08 000000078 INF: ===================Camera #0 Frame #236=================== 17-03-02 13:15:08.393 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237. 17-03-02 13:15:08.393 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237 17-03-02 13:15:08.393 -08 000000047 INF: ===================Camera #2 Frame #237=================== 17-03-02 13:15:08.416 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:08.467 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:08.478 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:08.529 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242. 17-03-02 13:15:08.529 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242 17-03-02 13:15:08.529 -08 000000078 INF: ===================Camera #0 Frame #242=================== 17-03-02 13:15:08.564 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-03-02 13:15:08.564 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-03-02 13:15:08.564 -08 000000047 INF: ===================Camera #2 Frame #244=================== 17-03-02 13:15:08.604 -08 000000053 INF: Y Motor: Unshifted Position: 1634611 17-03-02 13:15:08.654 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:08.699 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-03-02 13:15:08.699 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-03-02 13:15:08.699 -08 000000078 INF: ===================Camera #0 Frame #249=================== 17-03-02 13:15:08.728 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:08.738 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-03-02 13:15:08.738 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-03-02 13:15:08.738 -08 000000047 INF: ===================Camera #2 Frame #250=================== 17-03-02 13:15:08.778 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:08.789 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:08.872 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-03-02 13:15:08.872 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-03-02 13:15:08.872 -08 000000078 INF: ===================Camera #0 Frame #255=================== 17-03-02 13:15:08.908 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256. 17-03-02 13:15:08.908 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256 17-03-02 13:15:08.908 -08 000000047 INF: ===================Camera #2 Frame #256=================== 17-03-02 13:15:08.914 -08 000000053 INF: Y Motor: Unshifted Position: 1432447 17-03-02 13:15:08.964 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:09.039 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:09.042 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261. 17-03-02 13:15:09.042 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261 17-03-02 13:15:09.042 -08 000000078 INF: ===================Camera #0 Frame #261=================== 17-03-02 13:15:09.078 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-03-02 13:15:09.078 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-03-02 13:15:09.078 -08 000000047 INF: ===================Camera #2 Frame #263=================== 17-03-02 13:15:09.090 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:09.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:09.212 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267. 17-03-02 13:15:09.212 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267 17-03-02 13:15:09.212 -08 000000078 INF: ===================Camera #0 Frame #267=================== 17-03-02 13:15:09.228 -08 000000053 INF: Y Motor: Unshifted Position: 1230302 17-03-02 13:15:09.252 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-03-02 13:15:09.252 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-03-02 13:15:09.252 -08 000000047 INF: ===================Camera #2 Frame #269=================== 17-03-02 13:15:09.278 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:09.349 -08 000000065 INF: FPGA: Recv TDIYWAIT 17-03-02 13:15:09.349 -08 000000102 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:09.351 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:09.351 -08 000000102 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:15:09.352 -08 000000030 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:15:09.352 -08 000000094 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:15:09.352 -08 000000030 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:15:09.352 -08 000000030 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:15:09.352 -08 000000030 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:15:09.352 -08 000000094 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:15:09.352 -08 000000094 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:15:09.352 -08 000000094 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:15:09.352 -08 000000030 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:15:09.353 -08 000000094 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:15:09.382 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:15:09.382 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:15:09.382 -08 000000078 INF: ===================Camera #0 Frame #272=================== 17-03-02 13:15:09.399 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:15:09.400 -08 000000078 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:09.401 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:09.412 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:09.531 -08 000000078 INF: Camera #0 ReleaseBuffer 17-03-02 13:15:09.531 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:15:09.531 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:15:09.531 -08 000000047 INF: ===================Camera #2 Frame #272=================== 17-03-02 13:15:09.531 -08 000000078 INF: ===================Camera TDI=================== 17-03-02 13:15:09.539 -08 000000053 INF: Y Motor: Unshifted Position: 1025985 17-03-02 13:15:09.540 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:15:09.541 -08 000000047 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:09.560 -08 000000078 INF: ====================================== 17-03-02 13:15:09.589 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:09.662 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:09.707 -08 000000047 INF: Camera #2 ReleaseBuffer 17-03-02 13:15:09.707 -08 000000047 INF: ===================Camera TDI=================== 17-03-02 13:15:09.725 -08 000000076 INF: FPGA: Recv EX1MV 17-03-02 13:15:09.725 -08 000000076 INF: FPGA: Recv EX2MV 17-03-02 13:15:09.725 -08 000000094 INF: Excitation Filter 2: Moved 107 steps in 372.6966 ms 17-03-02 13:15:09.725 -08 000000030 INF: Excitation Filter 1: Moved 107 steps in 372.8604 ms 17-03-02 13:15:09.725 -08 000000030 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.9536 ms 17-03-02 13:15:09.725 -08 000000030 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.0288 ms 17-03-02 13:15:09.725 -08 000000094 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.8 ms 17-03-02 13:15:09.725 -08 000000094 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.1764 ms 17-03-02 13:15:09.725 -08 000000030 INF: ====================================== 17-03-02 13:15:09.725 -08 000000094 INF: ====================================== 17-03-02 13:15:09.726 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:09.727 -08 000000053 INF: Y Motor: Unshifted Position: 992166 17-03-02 13:15:09.727 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:09.727 -08 000000053 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:09.727 -08 000000102 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:09.728 -08 000000102 INF: ====================================== 17-03-02 13:15:09.741 -08 000000047 INF: ====================================== 17-03-02 13:15:09.742 -08 000000028 INF: ===================Camera TDI=================== 17-03-02 13:15:09.743 -08 000000028 INF: ====================================== 17-03-02 13:15:09.789 -08 000000053 INF: Y Motor: Recv v 0\r 17-03-02 13:15:09.789 -08 000000053 INF: Y Motor: Moved to 14.9217 after 7862 ms 17-03-02 13:15:09.789 -08 000000053 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:09.851 -08 000000053 INF: Y Motor: Recv v 4097\r 17-03-02 13:15:09.851 -08 000000053 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:09.851 -08 000000053 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:09.912 -08 000000053 INF: Y Motor: Recv v 0\r 17-03-02 13:15:09.912 -08 000000053 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:09.912 -08 000000053 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:09.974 -08 000000053 INF: Y Motor: Recv v 134217728\r 17-03-02 13:15:09.974 -08 000000053 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:15:09.974 -08 000000053 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:09.974 -08 000000053 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:09.976 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:10.037 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:10.038 -08 000000053 INF: Y Motor: Recv v 0\r 17-03-02 13:15:10.038 -08 000000053 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:10.038 -08 000000053 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:10.038 -08 000000053 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:10.100 -08 000000053 INF: Y Motor: Recv ok\r 17-03-02 13:15:10.100 -08 000000053 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:10.100 -08 000000053 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:10.164 -08 000000053 INF: Y Motor: Recv ok\r 17-03-02 13:15:10.164 -08 000000053 INF: ====================================== 17-03-02 13:15:10.165 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:10.166 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:10.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.167 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:15:10.222 -08 000000126 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:15:10.222 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:10.284 -08 000000129 INF: FPGA: Recv TDIYERD 1492166 17-03-02 13:15:10.284 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:15:10.287 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:10.349 -08 000000071 INF: FPGA: Recv ZADCR 32356 17-03-02 13:15:10.349 -08 000000042 INF: At scan end Y pos = 14.922 and Z pos = -0.124. Y moved -48.539 mm 17-03-02 13:15:10.349 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:15:10.350 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:10.411 -08 000000044 INF: FPGA: Recv TDIPULSES 139265 17-03-02 13:15:10.411 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-03-02 13:15:10.411 -08 000000042 INF: TDIScan finished after 12654.9985 ms 17-03-02 13:15:10.411 -08 000000042 INF: Image[0]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm) 17-03-02 13:15:10.411 -08 000000042 INF: Image[2]: Y should trigger at 63.461 mm, 2nd row was at 64.370 mm (error = 0.909 mm) 17-03-02 13:15:10.413 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.448 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.776 um 17-03-02 13:15:10.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.449 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:15:10.473 -08 000000065 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:15:10.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.474 -08 000000072 INF: ===================Dither Clean Up Command=================== 17-03-02 13:15:10.474 -08 000000054 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:15:10.474 -08 000000071 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:15:10.474 -08 000000052 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:15:10.475 -08 000000052 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:15:10.475 -08 000000054 INF: ====================================== 17-03-02 13:15:10.475 -08 000000052 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:15:10.475 -08 000000071 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:15:10.475 -08 000000071 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:15:10.475 -08 000000086 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:15:10.475 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:10.476 -08 000000086 INF: FPGA: Xmit ZSEL 0\n 17-03-02 13:15:10.478 -08 000000036 INF: ===================LFT:Extracting coords=================== 17-03-02 13:15:10.503 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:10.504 -08 000000036 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-03-02 13:15:10.505 -08 000000056 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:10.505 -08 000000078 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:10.505 -08 000000068 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:10.505 -08 000000087 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:10.505 -08 000000056 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:10.505 -08 000000078 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:10.505 -08 000000087 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:10.506 -08 000000068 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:10.535 -08 000000038 INF: FPGA: Recv ZSTEP 17-03-02 13:15:10.535 -08 000000038 INF: FPGA: Recv ZSEL 17-03-02 13:15:10.535 -08 000000086 INF: FPGA: Xmit ZDACW 39666\n 17-03-02 13:15:10.535 -08 000000052 INF: ====================================== 17-03-02 13:15:10.537 -08 000000071 INF: Y Motor: Recv ok\r 17-03-02 13:15:10.537 -08 000000071 INF: ====================================== 17-03-02 13:15:10.579 -08 000000056 INF: FC:B, C:162,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:10.580 -08 000000078 INF: FC:B, C:162,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:10.580 -08 000000068 INF: FC:B, C:162,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:10.585 -08 000000087 INF: FC:B, C:162,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:10.596 -08 000000102 INF: FPGA: Recv ZDACW 17-03-02 13:15:10.597 -08 000000086 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-03-02 13:15:10.597 -08 000000086 INF: FPGA: Xmit TDIBB 0\n 17-03-02 13:15:10.600 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:10.661 -08 000000099 INF: FPGA: Recv TDIBB 17-03-02 13:15:10.661 -08 000000086 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:15:10.662 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:10.662 -08 000000086 INF: ====================================== 17-03-02 13:15:10.731 -08 000000056 INF: LFT found best fwhm score 2.000525 in 151 ms 17-03-02 13:15:10.731 -08 000000056 INF: LFT found good score at index 7845 with fwhm value 2.000525. Next cycle, cycle 163 starting Z position for top surface is at -0.152 mm FC:B, C:162,L:1,T 17-03-02 13:15:10.731 -08 000000078 INF: LFT found best fwhm score 2.000593 in 151 ms 17-03-02 13:15:10.731 -08 000000078 INF: LFT found good score at index 1129 with fwhm value 2.000593. Next cycle, cycle 163 starting Z position for top surface is at -0.154 mm FC:B, C:162,L:1,T 17-03-02 13:15:10.731 -08 000000068 INF: LFT found best fwhm score 2.227838 in 151 ms 17-03-02 13:15:10.731 -08 000000068 INF: LFT found good score at index 7653 with fwhm value 2.227838. Next cycle, cycle 163 starting Z position for top surface is at -0.152 mm FC:B, C:162,L:1,T 17-03-02 13:15:10.731 -08 000000056 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:10.731 -08 000000078 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:10.731 -08 000000068 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:10.732 -08 000000056 INF: ====================================== 17-03-02 13:15:10.732 -08 000000068 INF: ====================================== 17-03-02 13:15:10.732 -08 000000078 INF: ====================================== 17-03-02 13:15:10.747 -08 000000087 INF: LFT found best fwhm score 2.000035 in 162 ms 17-03-02 13:15:10.747 -08 000000087 INF: LFT found good score at index 1817 with fwhm value 2.000035. Next cycle, cycle 163 starting Z position for top surface is at -0.154 mm FC:B, C:162,L:1,T 17-03-02 13:15:10.747 -08 000000087 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:10.748 -08 000000087 INF: ====================================== 17-03-02 13:15:10.749 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:10.750 -08 000000036 INF: LFT weighted average best Z for top surface is at -0.153mm FC:B, C:162,L:1,T 17-03-02 13:15:10.750 -08 000000036 INF: ====================================== 17-03-02 13:15:10.751 -08 000000072 INF: ====================================== 17-03-02 13:15:10.752 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:15:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:15:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:15:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:15:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:10.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-03-02 13:15:10.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-03-02 13:15:10.756 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis=================== 17-03-02 13:15:10.756 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB=================== 17-03-02 13:15:10.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Waiting for image analysis=================== 17-03-02 13:15:10.757 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-03-02 13:15:10.779 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-03-02 13:15:10.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:15:10.780 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:10.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:15:10.780 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-03-02 13:15:10.781 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 1=================== 17-03-02 13:15:10.781 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface=================== 17-03-02 13:15:10.797 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:10.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:10.863 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:15:10.864 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:15:10.881 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1201 Request: {"Cycle":162,"Lane":1,"Tile":1201,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF286","HCSMMF229","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:10.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:10.963 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:15:10.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:10.964 -08 000000042 INF: Compensator: Moving OutOfPath 17-03-02 13:15:10.964 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n 17-03-02 13:15:11.231 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1203 Request: {"Cycle":162,"Lane":1,"Tile":1203,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF184","HCSMMF193","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:11.241 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1215 Request: {"Cycle":162,"Lane":1,"Tile":1215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF262","HCSMMF188","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.247 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1207 Request: {"Cycle":162,"Lane":1,"Tile":1207,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF261","HCSMMF189","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.254 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1206 Request: {"Cycle":162,"Lane":1,"Tile":1206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF238","HCSMMF264","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.260 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1211 Request: {"Cycle":162,"Lane":1,"Tile":1211,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF241","HCSMMF191","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.267 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1219 Request: {"Cycle":162,"Lane":1,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF270","HCSMMF192","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.271 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1216 Request: {"Cycle":162,"Lane":1,"Tile":1216,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF250","HCSMMF216","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.272 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1213 Request: {"Cycle":162,"Lane":1,"Tile":1213,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF263","HCSMMF249","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.272 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1210 Request: {"Cycle":162,"Lane":1,"Tile":1210,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF221","HCSMMF225","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.273 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1208 Request: {"Cycle":162,"Lane":1,"Tile":1208,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF222","HCSMMF275","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.279 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1205 Request: {"Cycle":162,"Lane":1,"Tile":1205,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF255","HCSMMF178","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.280 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1202 Request: {"Cycle":162,"Lane":1,"Tile":1202,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF256","HCSMMF252","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.282 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1209 Request: {"Cycle":162,"Lane":1,"Tile":1209,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF202","HCSMMF198","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.282 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1221 Request: {"Cycle":162,"Lane":1,"Tile":1221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF272","HCSMMF234","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.283 -08 000000116 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1214 Request: {"Cycle":162,"Lane":1,"Tile":1214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF211","HCSMMF248","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.284 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1204 Request: {"Cycle":162,"Lane":1,"Tile":1204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF228","HCSMMF181","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.285 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1212 Request: {"Cycle":162,"Lane":1,"Tile":1212,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF190","HCSMMF223","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.286 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1226 Request: {"Cycle":162,"Lane":1,"Tile":1226,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF279","HCSMMF182","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.288 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1220 Request: {"Cycle":162,"Lane":1,"Tile":1220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF271","HCSMMF196","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.289 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1223 Request: {"Cycle":162,"Lane":1,"Tile":1223,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF213","HCSMMF230","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.289 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1225 Request: {"Cycle":162,"Lane":1,"Tile":1225,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF227","HCSMMF266","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.290 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1227 Request: {"Cycle":162,"Lane":1,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF226","HCSMMF203","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.291 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1224 Request: {"Cycle":162,"Lane":1,"Tile":1224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF253","HCSMMF185","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.291 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1218 Request: {"Cycle":162,"Lane":1,"Tile":1218,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF268","HCSMMF220","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.292 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1217 Request: {"Cycle":162,"Lane":1,"Tile":1217,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF239","HCSMMF260","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.293 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1228 Request: {"Cycle":162,"Lane":1,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF243","HCSMMF237","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.294 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 162 Tile: 1222 Request: {"Cycle":162,"Lane":1,"Tile":1222,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF269","HCSMMF209","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:11.299 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:11.306 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-03-02 13:15:11.349 -08 000000085 INF: FPGA: Recv MIOCOMPR 17-03-02 13:15:11.349 -08 000000042 INF: Compensator: Moved OutOfPath in 384 ms 17-03-02 13:15:11.349 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543 17-03-02 13:15:11.350 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:11.351 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:11.351 -08 000000083 INF: ===================Move Tilt Motor 1=================== 17-03-02 13:15:11.352 -08 000000068 INF: ===================Move Tilt Motor 2=================== 17-03-02 13:15:11.352 -08 000000083 INF: Tilt Motor 1: Moving to 4.9972 mm, started at 5.0701 mm, delta = -0.0729 mm 17-03-02 13:15:11.352 -08 000000083 INF: FPGA: Xmit T1RD\n 17-03-02 13:15:11.352 -08 000000068 INF: Tilt Motor 2: Moving to 5.4000 mm, started at 5.2809 mm, delta = 0.1191 mm 17-03-02 13:15:11.352 -08 000000094 INF: ===================Move Tilt Motor 3=================== 17-03-02 13:15:11.352 -08 000000094 INF: Tilt Motor 3: Moving to 5.3454 mm, started at 5.2250 mm, delta = 0.1204 mm 17-03-02 13:15:11.356 -08 000000068 INF: FPGA: Xmit T2RD\n 17-03-02 13:15:11.358 -08 000000094 INF: FPGA: Xmit T3RD\n 17-03-02 13:15:11.393 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:11.393 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-03-02 13:15:11.409 -08 000000058 INF: FPGA: Recv T1RD 19960 17-03-02 13:15:11.409 -08 000000058 INF: FPGA: Recv T2RD 20791 17-03-02 13:15:11.409 -08 000000058 INF: FPGA: Recv T3RD 20571 17-03-02 13:15:11.409 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3428 + 3/6 17-03-02 13:15:11.409 -08 000000068 INF: Tilt Motor 2: Encoder: at motor step 3465 + 1/6 17-03-02 13:15:11.409 -08 000000068 INF: Tilt Motor 2: Moving to 21260 encoder counts 17-03-02 13:15:11.409 -08 000000068 INF: FPGA: Xmit T2MOVETO 21260\n 17-03-02 13:15:11.409 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3326 + 4/6 17-03-02 13:15:11.409 -08 000000083 INF: Tilt Motor 1: Moving to 19674 encoder counts 17-03-02 13:15:11.410 -08 000000083 INF: FPGA: Xmit T1MOVETO 19674\n 17-03-02 13:15:11.410 -08 000000094 INF: Tilt Motor 3: Moving to 21045 encoder counts 17-03-02 13:15:11.411 -08 000000094 INF: FPGA: Xmit T3MOVETO 21045\n 17-03-02 13:15:11.482 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:11.483 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:11.488 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-03-02 13:15:11.537 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:11.583 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:11.589 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-03-02 13:15:11.598 -08 000000111 INF: FPGA: Recv T1MOVETO 48 17-03-02 13:15:11.598 -08 000000083 INF: Tilt Motor 1: To move from 5.070 to 4.997 (-0.073 mm) should take 48 steps, but required 48 steps (0.073 mm). Slippage = 0.000 mm (0.00%) 17-03-02 13:15:11.598 -08 000000083 INF: FPGA: Xmit T1RD\n 17-03-02 13:15:11.660 -08 000000029 INF: FPGA: Recv T2MOVETO 77 17-03-02 13:15:11.660 -08 000000029 INF: FPGA: Recv T3MOVETO 78 17-03-02 13:15:11.660 -08 000000029 INF: FPGA: Recv T1RD 19675 17-03-02 13:15:11.660 -08 000000068 INF: Tilt Motor 2: To move from 5.281 to 5.400 (0.119 mm) should take 78 steps, but required 77 steps (0.117 mm). Slippage = -0.002 mm (-0.01%) 17-03-02 13:15:11.660 -08 000000094 INF: Tilt Motor 3: To move from 5.225 to 5.345 (0.120 mm) should take 79 steps, but required 78 steps (0.119 mm). Slippage = -0.002 mm (-0.01%) 17-03-02 13:15:11.660 -08 000000068 INF: FPGA: Xmit T2RD\n 17-03-02 13:15:11.660 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3279 + 1/6 17-03-02 13:15:11.661 -08 000000083 INF: FPGA: Xmit T1RD\n 17-03-02 13:15:11.663 -08 000000094 INF: FPGA: Xmit T3RD\n 17-03-02 13:15:11.678 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:11.683 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-03-02 13:15:11.722 -08 000000038 INF: FPGA: Recv T2RD 21253 17-03-02 13:15:11.722 -08 000000038 INF: FPGA: Recv T1RD 19675 17-03-02 13:15:11.722 -08 000000038 INF: FPGA: Recv T3RD 21039 17-03-02 13:15:11.722 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3279 + 1/6 17-03-02 13:15:11.722 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3506 + 3/6 17-03-02 13:15:11.722 -08 000000068 INF: Tilt Motor 2: Encoder: at motor step 3542 + 1/6 17-03-02 13:15:11.722 -08 000000083 INF: FPGA: Xmit T1RD\n 17-03-02 13:15:11.725 -08 000000094 INF: FPGA: Xmit T3RD\n 17-03-02 13:15:11.728 -08 000000068 INF: FPGA: Xmit T2RD\n 17-03-02 13:15:11.768 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:11.783 -08 000000036 INF: FPGA: Recv T1RD 19675 17-03-02 13:15:11.783 -08 000000036 INF: FPGA: Recv T3RD 21039 17-03-02 13:15:11.783 -08 000000036 INF: FPGA: Recv T2RD 21253 17-03-02 13:15:11.783 -08 000000068 INF: Tilt Motor 2: Encoder: at motor step 3542 + 1/6 17-03-02 13:15:11.783 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3506 + 3/6 17-03-02 13:15:11.783 -08 000000068 INF: FPGA: Xmit T2RD\n 17-03-02 13:15:11.783 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3279 + 1/6 17-03-02 13:15:11.783 -08 000000083 INF: Tilt Motor 1: After move to 4.9972, error = 0.0003, min/max error = -0.0017/0.0019, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:11.783 -08 000000083 INF: Tilt Motor 1: Moved to 4.9975 after 430.7491 ms 17-03-02 13:15:11.784 -08 000000083 INF: ====================================== 17-03-02 13:15:11.784 -08 000000094 INF: FPGA: Xmit T3RD\n 17-03-02 13:15:11.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:11.845 -08 000000032 INF: FPGA: Recv T2RD 21253 17-03-02 13:15:11.845 -08 000000032 INF: FPGA: Recv T3RD 21039 17-03-02 13:15:11.845 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3506 + 3/6 17-03-02 13:15:11.845 -08 000000094 INF: Tilt Motor 3: After move to 5.3454, error = -0.0015, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:11.845 -08 000000068 INF: Tilt Motor 2: Encoder: at motor step 3542 + 1/6 17-03-02 13:15:11.845 -08 000000068 INF: Tilt Motor 2: After move to 5.4000, error = -0.0018, min/max error = -0.0020/0.0017, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:11.845 -08 000000094 INF: Tilt Motor 3: Moved to 5.3439 after 492.111 ms 17-03-02 13:15:11.845 -08 000000068 INF: Tilt Motor 2: Moved to 5.3983 after 492.3946 ms 17-03-02 13:15:11.845 -08 000000094 INF: ====================================== 17-03-02 13:15:11.846 -08 000000068 INF: ====================================== 17-03-02 13:15:11.847 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:11.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:11.848 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:11.854 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm. 17-03-02 13:15:11.863 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm. 17-03-02 13:15:11.863 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-03-02 13:15:11.863 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-03-02 13:15:11.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:11.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:11.867 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0 17-03-02 13:15:11.867 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format 17-03-02 13:15:11.867 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n 17-03-02 13:15:11.910 -08 000000052 INF: FPGA: Recv ZSTEP 17-03-02 13:15:11.910 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:11.911 -08 000000042 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:15:11.911 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1513 mm 17-03-02 13:15:11.911 -08 000000042 INF: FPGA: Xmit ZTRG 0\n 17-03-02 13:15:11.928 -08 000000100 INF: RunCopyService queue size at 3/2/2017 1:15:11 PM is 1 17-03-02 13:15:11.972 -08 000000104 INF: FPGA: Recv ZTRG 17-03-02 13:15:11.972 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n 17-03-02 13:15:12.035 -08 000000116 INF: FPGA: Recv ZYT 17-03-02 13:15:12.035 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-03-02 13:15:12.035 -08 000000042 INF: FPGA: Xmit ZMV 60292\n 17-03-02 13:15:12.058 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-03-02 13:15:12.097 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:12.098 -08 000000027 INF: FPGA: Recv @LOG Trigger Camera 17-03-02 13:15:12.098 -08 000000027 INF: FPGA: Recv ZMV 17-03-02 13:15:12.098 -08 000000006 INF: FPGA: Trigger Camera 17-03-02 13:15:12.098 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.7655 ms 17-03-02 13:15:12.098 -08 000000042 INF: FPGA: Xmit ZDACR\n 17-03-02 13:15:12.159 -08 000000105 INF: FPGA: Recv ZDACR 60292 17-03-02 13:15:12.159 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.6492 ms w/comms 17-03-02 13:15:12.159 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:12.159 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.8689 ms 17-03-02 13:15:12.160 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:12.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:12.160 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm. 17-03-02 13:15:12.169 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-03-02 13:15:12.169 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:15:12.169 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:15:12.169 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format 17-03-02 13:15:12.169 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n 17-03-02 13:15:12.221 -08 000000095 INF: FPGA: Recv ZSTEP 17-03-02 13:15:12.232 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:12.232 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm. 17-03-02 13:15:12.241 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-03-02 13:15:12.241 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:15:12.241 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:15:12.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:12.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:15:12.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:12.244 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1 17-03-02 13:15:12.244 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:12.245 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:12.245 -08 000000027 INF: ===================MoveEmissionFilters=================== 17-03-02 13:15:12.246 -08 000000094 INF: ===================Move X,Y=================== 17-03-02 13:15:12.246 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:12.247 -08 000000094 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:15:12.247 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:12.248 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:12.248 -08 000000071 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:12.248 -08 000000060 INF: ===================Move X Motor without settling=================== 17-03-02 13:15:12.248 -08 000000060 INF: X Motor: Xmit PR VM\n 17-03-02 13:15:12.248 -08 000000056 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:12.248 -08 000000056 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9217 mm 17-03-02 13:15:12.248 -08 000000115 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:15:12.248 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:12.248 -08 000000056 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:12.248 -08 000000056 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:12.249 -08 000000071 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:12.249 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:12.250 -08 000000032 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:15:12.250 -08 000000053 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:15:12.250 -08 000000115 INF: ====================================== 17-03-02 13:15:12.250 -08 000000032 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:15:12.250 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:12.250 -08 000000053 INF: ====================================== 17-03-02 13:15:12.250 -08 000000032 INF: ====================================== 17-03-02 13:15:12.251 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:12.251 -08 000000126 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:15:12.252 -08 000000066 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:15:12.252 -08 000000126 INF: ====================================== 17-03-02 13:15:12.252 -08 000000053 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:15:12.252 -08 000000066 INF: ====================================== 17-03-02 13:15:12.252 -08 000000102 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:15:12.252 -08 000000033 INF: ====================================== 17-03-02 13:15:12.253 -08 000000053 INF: ====================================== 17-03-02 13:15:12.253 -08 000000102 INF: ====================================== 17-03-02 13:15:12.253 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:12.254 -08 000000115 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:15:12.254 -08 000000115 INF: ====================================== 17-03-02 13:15:12.255 -08 000000045 INF: ====================================== 17-03-02 13:15:12.256 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:12.256 -08 000000071 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:12.257 -08 000000091 INF: ====================================== 17-03-02 13:15:12.257 -08 000000071 INF: ====================================== 17-03-02 13:15:12.258 -08 000000027 INF: ====================================== 17-03-02 13:15:12.304 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:15:12.304 -08 000000056 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:12.304 -08 000000056 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:12.306 -08 000000060 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:15:12.306 -08 000000060 INF: X Motor: Xmit PR VI\n 17-03-02 13:15:12.364 -08 000000060 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:15:12.364 -08 000000060 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:15:12.364 -08 000000060 INF: X Motor: Moving to 71.9506 mm @15.000 mm/sec, started at 69.6958 mm 17-03-02 13:15:12.364 -08 000000060 INF: X Motor: Xmit MA 5305\n 17-03-02 13:15:12.365 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:15:12.365 -08 000000056 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:12.410 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:12.426 -08 000000056 INF: Y Motor: Recv v 0\r 17-03-02 13:15:12.426 -08 000000056 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:12.426 -08 000000056 INF: Y Motor: Set target position to 5953351 encoder counts 17-03-02 13:15:12.426 -08 000000056 INF: Y Motor: Xmit s r0xca 5953351\r 17-03-02 13:15:12.429 -08 000000060 INF: X Motor: Recv MA 5305\r\n> 17-03-02 13:15:12.429 -08 000000060 INF: X Motor: WaitUntilStopped 60150 17-03-02 13:15:12.486 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:12.487 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:15:12.487 -08 000000056 INF: Y Motor: Start the move command 17-03-02 13:15:12.487 -08 000000056 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:12.549 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:15:12.549 -08 000000056 INF: Y Motor: WaitUntilStopped 61984 17-03-02 13:15:12.549 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:12.675 -08 000000056 INF: Y Motor: Unshifted Position: 1078898 17-03-02 13:15:12.725 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:12.736 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:12.800 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:12.851 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:12.986 -08 000000056 INF: Y Motor: Unshifted Position: 1782157 17-03-02 13:15:13.036 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:13.048 -08 000000060 INF: X Motor: Xmit PR ER\n 17-03-02 13:15:13.050 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:13.111 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:13.114 -08 000000060 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:15:13.114 -08 000000060 INF: X Motor: Moved to 71.9517 after 685 ms 17-03-02 13:15:13.114 -08 000000060 INF: ====================================== 17-03-02 13:15:13.164 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:13.300 -08 000000056 INF: Y Motor: Unshifted Position: 2565512 17-03-02 13:15:13.350 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:13.361 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:13.424 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:13.475 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:13.610 -08 000000056 INF: Y Motor: Unshifted Position: 3342973 17-03-02 13:15:13.660 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:13.674 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:13.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:13.786 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:13.923 -08 000000056 INF: Y Motor: Unshifted Position: 4130522 17-03-02 13:15:13.973 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:13.985 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:14.046 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:14.097 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:14.236 -08 000000056 INF: Y Motor: Unshifted Position: 4911319 17-03-02 13:15:14.286 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:14.296 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:14.360 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:14.411 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:14.546 -08 000000056 INF: Y Motor: Unshifted Position: 5682122 17-03-02 13:15:14.596 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:14.610 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:14.673 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:14.726 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:14.871 -08 000000056 INF: Y Motor: Unshifted Position: 5953353 17-03-02 13:15:14.871 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:14.871 -08 000000056 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:14.921 -08 000000056 INF: Y Motor: Recv v 0\r 17-03-02 13:15:14.921 -08 000000056 INF: Y Motor: Moved to 64.5335 after 2372 ms 17-03-02 13:15:14.921 -08 000000056 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:14.923 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:14.984 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:14.985 -08 000000056 INF: Y Motor: Recv v 4096\r 17-03-02 13:15:14.985 -08 000000056 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:14.985 -08 000000056 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:15.048 -08 000000056 INF: Y Motor: Recv v 0\r 17-03-02 13:15:15.048 -08 000000056 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:15.048 -08 000000056 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:15.110 -08 000000056 INF: Y Motor: Recv v 402653184\r 17-03-02 13:15:15.110 -08 000000056 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:15:15.110 -08 000000056 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:15.110 -08 000000056 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:15.170 -08 000000056 INF: Y Motor: Recv v 0\r 17-03-02 13:15:15.170 -08 000000056 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:15.170 -08 000000056 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:15.170 -08 000000056 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:15.232 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:15:15.232 -08 000000056 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:15.232 -08 000000056 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:15.234 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:15.294 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:15.295 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:15:15.295 -08 000000056 INF: ====================================== 17-03-02 13:15:15.297 -08 000000094 INF: ===================Move X,Y=================== 17-03-02 13:15:15.298 -08 000000094 INF: ====================================== 17-03-02 13:15:15.300 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:15.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:15.302 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec 17-03-02 13:15:15.302 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r 17-03-02 13:15:15.358 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:15:15.358 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n 17-03-02 13:15:15.418 -08 000000091 INF: FPGA: Recv ZFREQCL 17-03-02 13:15:15.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:15:15.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:15.419 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:15.480 -08 000000071 INF: FPGA: Recv TDIYERD 6453352 17-03-02 13:15:15.480 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm) 17-03-02 13:15:15.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:15.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:15.482 -08 000000053 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:15.482 -08 000000115 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:15:15.482 -08 000000115 INF: ====================================== 17-03-02 13:15:15.483 -08 000000053 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:15:15.483 -08 000000053 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:15.484 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:15:15.485 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:15:15.485 -08 000000053 INF: FPGA: Xmit TDIYPOS 6433351\n 17-03-02 13:15:15.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:15.544 -08 000000027 INF: FPGA: Recv TDIYPOS 17-03-02 13:15:15.545 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:15:15.546 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:15:15.546 -08 000000053 INF: FPGA: Xmit TDIYARM2 3072 1 1\n 17-03-02 13:15:15.606 -08 000000082 INF: FPGA: Recv TDIYARM2 17-03-02 13:15:15.606 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:15:15.607 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:15.608 -08 000000053 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:15.609 -08 000000053 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:15:15.610 -08 000000053 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:15.611 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-03-02 13:15:15.612 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:15:15.613 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:15.857 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:15.919 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:15.983 -08 000000053 INF: Camera #0 AttachBuffer (imageDataPtr = 69126516224 imgPtr = 69126516224 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-03-02 13:15:15.983 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072 17-03-02 13:15:15.983 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:15.998 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:15:16.001 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:16.169 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:16.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:16.393 -08 000000053 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821386880 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-03-02 13:15:16.393 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072 17-03-02 13:15:16.394 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:16.408 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:15:16.410 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-03-02 13:15:16.411 -08 000000053 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:16.412 -08 000000053 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:16.413 -08 000000053 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:15:16.413 -08 000000053 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:16.415 -08 000000053 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:15:16.415 -08 000000053 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:15:16.415 -08 000000053 INF: Z Motor: Arming to move to -0.0100 mm 17-03-02 13:15:16.415 -08 000000053 INF: FPGA: Xmit ZYT 0 2\n 17-03-02 13:15:16.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:16.480 -08 000000132 INF: FPGA: Recv ZYT 17-03-02 13:15:16.480 -08 000000053 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines) 17-03-02 13:15:16.480 -08 000000053 INF: FPGA: Xmit ZARM 2621\n 17-03-02 13:15:16.542 -08 000000066 INF: FPGA: Recv ZARM 17-03-02 13:15:16.542 -08 000000053 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9781 ms 17-03-02 13:15:16.542 -08 000000053 INF: Z Motor: ArmAbsStepped took 126.9284 ms 17-03-02 13:15:16.542 -08 000000053 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:16.543 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:16.544 -08 000000053 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:16.545 -08 000000053 INF: ====================================== 17-03-02 13:15:16.546 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:16.547 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:16.547 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:16.548 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:16.548 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:16.549 -08 000000099 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:15:16.549 -08 000000033 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:15:16.549 -08 000000099 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:15:16.550 -08 000000099 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:15:16.550 -08 000000099 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:15:16.550 -08 000000099 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:15:16.550 -08 000000033 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:15:16.550 -08 000000033 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:15:16.550 -08 000000033 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:15:16.551 -08 000000033 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:15:16.793 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:16.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:16.980 -08 000000131 INF: FPGA: Recv EX2MV 17-03-02 13:15:16.980 -08 000000131 INF: FPGA: Recv EX1MV 17-03-02 13:15:16.980 -08 000000033 INF: Excitation Filter 1: Moved -107 steps in 429.9808 ms 17-03-02 13:15:16.980 -08 000000033 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.0994 ms 17-03-02 13:15:16.980 -08 000000033 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 430.2835 ms 17-03-02 13:15:16.980 -08 000000099 INF: Excitation Filter 2: Moved -107 steps in 430.212 ms 17-03-02 13:15:16.980 -08 000000099 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 430.4937 ms 17-03-02 13:15:16.980 -08 000000099 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 430.7008 ms 17-03-02 13:15:16.980 -08 000000033 INF: ====================================== 17-03-02 13:15:16.980 -08 000000099 INF: ====================================== 17-03-02 13:15:16.982 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:16.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:16.984 -08 000000100 INF: ===================Serial=================== 17-03-02 13:15:16.984 -08 000000105 INF: ===================Camera TDI=================== 17-03-02 13:15:16.984 -08 000000068 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:16.984 -08 000000098 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:16.985 -08 000000098 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm 17-03-02 13:15:16.985 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:16.985 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:16.985 -08 000000100 INF: ===================Serial, FPGA Z Wait=================== 17-03-02 13:15:16.985 -08 000000100 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:15:16.985 -08 000000105 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:15:16.985 -08 000000068 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:15:16.986 -08 000000066 INF: ===================Camera TDI=================== 17-03-02 13:15:16.986 -08 000000027 INF: ===================Camera TDI=================== 17-03-02 13:15:16.987 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:16.987 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:16.988 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:16.988 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:16.988 -08 000000068 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:15:17.043 -08 000000098 INF: Y Motor: Recv ok\r 17-03-02 13:15:17.043 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:17.043 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:17.105 -08 000000098 INF: Y Motor: Recv ok\r 17-03-02 13:15:17.105 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:17.106 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:17.137 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:17.137 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:17.138 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:17.138 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:17.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:17.171 -08 000000098 INF: Y Motor: Recv v 0\r 17-03-02 13:15:17.171 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:17.171 -08 000000098 INF: Y Motor: Set target position to 5797042 encoder counts 17-03-02 13:15:17.171 -08 000000098 INF: Y Motor: Xmit s r0xca 5797042\r 17-03-02 13:15:17.231 -08 000000098 INF: Y Motor: Recv ok\r 17-03-02 13:15:17.231 -08 000000098 INF: Y Motor: Start the move command 17-03-02 13:15:17.231 -08 000000098 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:17.287 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:17.287 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:17.288 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:17.288 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:17.292 -08 000000098 INF: Y Motor: Recv ok\r 17-03-02 13:15:17.292 -08 000000098 INF: Y Motor: WaitUntilStopped 61042 17-03-02 13:15:17.292 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:17.416 -08 000000098 INF: Y Motor: Unshifted Position: 5935480 17-03-02 13:15:17.418 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:17.437 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:17.437 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:17.438 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:17.438 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:17.466 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:17.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:17.587 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-03-02 13:15:17.587 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-03-02 13:15:17.587 -08 000000027 INF: ===================Camera #2 Frame #1=================== 17-03-02 13:15:17.588 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-03-02 13:15:17.588 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-03-02 13:15:17.588 -08 000000066 INF: ===================Camera #0 Frame #1=================== 17-03-02 13:15:17.594 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:17.729 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:17.730 -08 000000098 INF: Y Motor: Unshifted Position: 5888529 17-03-02 13:15:17.740 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-03-02 13:15:17.740 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-03-02 13:15:17.740 -08 000000027 INF: ===================Camera #2 Frame #3=================== 17-03-02 13:15:17.741 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-03-02 13:15:17.741 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-03-02 13:15:17.741 -08 000000066 INF: ===================Camera #0 Frame #3=================== 17-03-02 13:15:17.780 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:17.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:17.897 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:15:17.897 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:15:17.897 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:15:17.897 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:15:17.897 -08 000000027 INF: ===================Camera #2 Frame #4=================== 17-03-02 13:15:17.897 -08 000000066 INF: ===================Camera #0 Frame #4=================== 17-03-02 13:15:17.904 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:18.041 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:18.041 -08 000000098 INF: Y Motor: Unshifted Position: 5841521 17-03-02 13:15:18.050 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:15:18.050 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:15:18.050 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:15:18.050 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:15:18.050 -08 000000066 INF: ===================Camera #0 Frame #5=================== 17-03-02 13:15:18.050 -08 000000027 INF: ===================Camera #2 Frame #5=================== 17-03-02 13:15:18.091 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:18.101 -08 000000065 INF: FPGA: Recv ZWAIT 17-03-02 13:15:18.101 -08 000000100 INF: ===================Serial=================== 17-03-02 13:15:18.103 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:18.103 -08 000000100 INF: ===================Serial, Confirm position Z Motor=================== 17-03-02 13:15:18.103 -08 000000100 INF: ===================Serial=================== 17-03-02 13:15:18.104 -08 000000100 INF: ====================================== 17-03-02 13:15:18.166 -08 000000053 INF: FPGA: Recv TDIYWAIT 17-03-02 13:15:18.166 -08 000000068 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:18.168 -08 000000068 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:15:18.169 -08 000000099 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:15:18.169 -08 000000069 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:15:18.169 -08 000000099 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:15:18.169 -08 000000099 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:15:18.169 -08 000000099 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:15:18.169 -08 000000099 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:15:18.169 -08 000000069 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:15:18.169 -08 000000069 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:15:18.169 -08 000000069 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:15:18.177 -08 000000069 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:15:18.203 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-03-02 13:15:18.203 -08 000000027 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-03-02 13:15:18.203 -08 000000027 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-03-02 13:15:18.203 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-03-02 13:15:18.203 -08 000000066 INF: ===================Camera #0 Frame #6=================== 17-03-02 13:15:18.203 -08 000000027 INF: ===================Camera #2 Frame #6=================== 17-03-02 13:15:18.206 -08 000000066 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-03-02 13:15:18.206 -08 000000027 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-03-02 13:15:18.207 -08 000000027 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:18.210 -08 000000066 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:18.217 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:18.246 -08 000000027 INF: Camera #2 ReleaseBuffer 17-03-02 13:15:18.246 -08 000000027 INF: ===================Camera TDI=================== 17-03-02 13:15:18.247 -08 000000027 INF: ====================================== 17-03-02 13:15:18.256 -08 000000066 INF: Camera #0 ReleaseBuffer 17-03-02 13:15:18.256 -08 000000066 INF: ===================Camera TDI=================== 17-03-02 13:15:18.257 -08 000000066 INF: ====================================== 17-03-02 13:15:18.259 -08 000000105 INF: ===================Camera TDI=================== 17-03-02 13:15:18.260 -08 000000105 INF: ====================================== 17-03-02 13:15:18.353 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:18.354 -08 000000098 INF: Y Motor: Unshifted Position: 5797060 17-03-02 13:15:18.404 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:18.415 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:18.541 -08 000000098 INF: Y Motor: Unshifted Position: 5797042 17-03-02 13:15:18.541 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:18.541 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:18.602 -08 000000087 INF: FPGA: Recv EX1MV 17-03-02 13:15:18.602 -08 000000087 INF: FPGA: Recv EX2MV 17-03-02 13:15:18.602 -08 000000069 INF: Excitation Filter 2: Moved 107 steps in 432.9351 ms 17-03-02 13:15:18.602 -08 000000099 INF: Excitation Filter 1: Moved 107 steps in 433.1498 ms 17-03-02 13:15:18.602 -08 000000069 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 433.0666 ms 17-03-02 13:15:18.602 -08 000000069 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 433.1807 ms 17-03-02 13:15:18.602 -08 000000099 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 433.2685 ms 17-03-02 13:15:18.602 -08 000000099 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 433.443 ms 17-03-02 13:15:18.602 -08 000000069 INF: ====================================== 17-03-02 13:15:18.603 -08 000000099 INF: ====================================== 17-03-02 13:15:18.604 -08 000000098 INF: Y Motor: Recv v 0\r 17-03-02 13:15:18.604 -08 000000098 INF: Y Motor: Moved to 62.9704 after 1312 ms 17-03-02 13:15:18.604 -08 000000098 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:18.605 -08 000000068 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:18.606 -08 000000068 INF: ====================================== 17-03-02 13:15:18.665 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:18.666 -08 000000098 INF: Y Motor: Recv v 4097\r 17-03-02 13:15:18.666 -08 000000098 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:18.666 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:18.727 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:18.728 -08 000000098 INF: Y Motor: Recv v 0\r 17-03-02 13:15:18.728 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:18.728 -08 000000098 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:18.791 -08 000000098 INF: Y Motor: Recv v 134217728\r 17-03-02 13:15:18.791 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:15:18.791 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:18.791 -08 000000098 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:18.853 -08 000000098 INF: Y Motor: Recv v 0\r 17-03-02 13:15:18.853 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:18.853 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:18.853 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:18.915 -08 000000098 INF: Y Motor: Recv ok\r 17-03-02 13:15:18.915 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:18.915 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:18.977 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:18.977 -08 000000098 INF: Y Motor: Recv ok\r 17-03-02 13:15:18.977 -08 000000098 INF: ====================================== 17-03-02 13:15:18.978 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:18.979 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:18.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:18.980 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:15:19.037 -08 000000132 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:15:19.037 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:19.038 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:19.099 -08 000000044 INF: FPGA: Recv TDIYERD 6297043 17-03-02 13:15:19.099 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:15:19.161 -08 000000030 INF: FPGA: Recv ZADCR 2421 17-03-02 13:15:19.161 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm 17-03-02 13:15:19.161 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:15:19.225 -08 000000065 INF: FPGA: Recv TDIPULSES 3073 17-03-02 13:15:19.225 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072 17-03-02 13:15:19.225 -08 000000042 INF: TDIScan finished after 6993.3106 ms 17-03-02 13:15:19.225 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-03-02 13:15:19.225 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-03-02 13:15:19.225 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:15:19.287 -08 000000044 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:15:19.288 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:19.288 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:19.288 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:19.289 -08 000000030 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:15:19.289 -08 000000032 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:15:19.289 -08 000000029 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:15:19.290 -08 000000030 INF: ====================================== 17-03-02 13:15:19.290 -08 000000032 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:15:19.290 -08 000000032 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:15:19.290 -08 000000029 INF: ====================================== 17-03-02 13:15:19.352 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:19.352 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:19.352 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:19.352 -08 000000018 INF: WaitCommand(5000) start 17-03-02 13:15:19.353 -08 000000032 INF: Y Motor: Recv ok\r 17-03-02 13:15:19.353 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left=================== 17-03-02 13:15:19.353 -08 000000032 INF: ====================================== 17-03-02 13:15:19.354 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:19.355 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:19.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:15:19.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:19.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:15:19.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:19.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:15:19.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:19.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:15:19.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:19.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:19.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:19.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, ETF: Extracting coords=================== 17-03-02 13:15:19.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:19.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point=================== 17-03-02 13:15:19.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics=================== 17-03-02 13:15:20.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point=================== 17-03-02 13:15:20.217 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0845243225430302Best Z position at top surface = -0.155500773150143Best Z position at top surface + compensator offset = -0.132800773150143 C:162,L:2,T 17-03-02 13:15:20.219 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.155500773150143 17-03-02 13:15:20.219 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.9552 17-03-02 13:15:20.219 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0845243225430302 17-03-02 13:15:20.219 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.61364 17-03-02 13:15:20.219 -08 000000042 INF: Z-height at LaneTopSurface is -0.155500773150143. 17-03-02 13:15:20.219 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:20.353 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:20.353 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left=================== 17-03-02 13:15:20.356 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:15:20.356 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:15:20.410 -08 000000129 INF: FPGA: Recv ZSTEP 17-03-02 13:15:20.410 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-03-02 13:15:20.412 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:20.412 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543 17-03-02 13:15:20.412 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:20.413 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:20.413 -08 000000033 INF: ===================Move Tilt Motor 2=================== 17-03-02 13:15:20.414 -08 000000028 INF: ===================Move Tilt Motor 1=================== 17-03-02 13:15:20.414 -08 000000033 INF: Tilt Motor 2: Moving to 5.4000 mm, started at 5.3983 mm, delta = 0.0018 mm 17-03-02 13:15:20.414 -08 000000033 INF: FPGA: Xmit T2RD\n 17-03-02 13:15:20.414 -08 000000095 INF: ===================Move Tilt Motor 3=================== 17-03-02 13:15:20.414 -08 000000095 INF: Tilt Motor 3: Moving to 5.3454 mm, started at 5.3439 mm, delta = 0.0015 mm 17-03-02 13:15:20.414 -08 000000028 INF: ====================================== 17-03-02 13:15:20.415 -08 000000095 INF: FPGA: Xmit T3RD\n 17-03-02 13:15:20.472 -08 000000044 INF: FPGA: Recv T2RD 21252 17-03-02 13:15:20.472 -08 000000044 INF: FPGA: Recv T3RD 21038 17-03-02 13:15:20.472 -08 000000095 INF: Tilt Motor 3: Encoder: at motor step 3506 + 2/6 17-03-02 13:15:20.472 -08 000000095 INF: Tilt Motor 3: Moving to 21045 encoder counts 17-03-02 13:15:20.472 -08 000000095 INF: FPGA: Xmit T3MOVETO 21045\n 17-03-02 13:15:20.472 -08 000000033 INF: Tilt Motor 2: Encoder: at motor step 3542 + 0/6 17-03-02 13:15:20.472 -08 000000033 INF: Tilt Motor 2: Moving to 21260 encoder counts 17-03-02 13:15:20.473 -08 000000033 INF: FPGA: Xmit T2MOVETO 21260\n 17-03-02 13:15:20.596 -08 000000100 INF: FPGA: Recv T3MOVETO 1 17-03-02 13:15:20.596 -08 000000100 INF: FPGA: Recv T2MOVETO 1 17-03-02 13:15:20.596 -08 000000095 INF: Tilt Motor 3: To move from 5.344 to 5.345 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%) 17-03-02 13:15:20.596 -08 000000033 INF: Tilt Motor 2: To move from 5.398 to 5.400 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%) 17-03-02 13:15:20.596 -08 000000095 INF: FPGA: Xmit T3RD\n 17-03-02 13:15:20.597 -08 000000033 INF: FPGA: Xmit T2RD\n 17-03-02 13:15:20.661 -08 000000038 INF: FPGA: Recv T3RD 21045 17-03-02 13:15:20.661 -08 000000038 INF: FPGA: Recv T2RD 21260 17-03-02 13:15:20.661 -08 000000095 INF: Tilt Motor 3: Encoder: at motor step 3507 + 3/6 17-03-02 13:15:20.661 -08 000000033 INF: Tilt Motor 2: Encoder: at motor step 3543 + 2/6 17-03-02 13:15:20.661 -08 000000095 INF: FPGA: Xmit T3RD\n 17-03-02 13:15:20.664 -08 000000033 INF: FPGA: Xmit T2RD\n 17-03-02 13:15:20.723 -08 000000094 INF: FPGA: Recv T3RD 21045 17-03-02 13:15:20.723 -08 000000094 INF: FPGA: Recv T2RD 21260 17-03-02 13:15:20.723 -08 000000033 INF: Tilt Motor 2: Encoder: at motor step 3543 + 2/6 17-03-02 13:15:20.723 -08 000000033 INF: FPGA: Xmit T2RD\n 17-03-02 13:15:20.723 -08 000000095 INF: Tilt Motor 3: Encoder: at motor step 3507 + 3/6 17-03-02 13:15:20.724 -08 000000095 INF: FPGA: Xmit T3RD\n 17-03-02 13:15:20.785 -08 000000111 INF: FPGA: Recv T2RD 21260 17-03-02 13:15:20.785 -08 000000111 INF: FPGA: Recv T3RD 21045 17-03-02 13:15:20.785 -08 000000033 INF: Tilt Motor 2: Encoder: at motor step 3543 + 2/6 17-03-02 13:15:20.785 -08 000000095 INF: Tilt Motor 3: Encoder: at motor step 3507 + 3/6 17-03-02 13:15:20.785 -08 000000095 INF: Tilt Motor 3: After move to 5.3454, error = 0.0000, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:20.785 -08 000000033 INF: Tilt Motor 2: After move to 5.4000, error = 0.0000, min/max error = -0.0020/0.0017, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:20.785 -08 000000095 INF: Tilt Motor 3: Moved to 5.3454 after 370.9958 ms 17-03-02 13:15:20.785 -08 000000033 INF: Tilt Motor 2: Moved to 5.4000 after 371.2984 ms 17-03-02 13:15:20.785 -08 000000095 INF: ====================================== 17-03-02 13:15:20.785 -08 000000033 INF: ====================================== 17-03-02 13:15:20.786 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:20.787 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:20.788 -08 000000042 INF: ETF Best Z: -0.1328008 mm (34812 DAC) 17-03-02 13:15:20.788 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:20.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:20.789 -08 000000042 INF: Compensator: Moving IntoPath 17-03-02 13:15:20.789 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n 17-03-02 13:15:21.319 -08 000000038 INF: FPGA: Recv MIOCOMPF 17-03-02 13:15:21.320 -08 000000042 INF: Compensator: Moved IntoPath in 530 ms 17-03-02 13:15:21.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:21.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:21.328 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39664, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface 17-03-02 13:15:21.328 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50464, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface 17-03-02 13:15:21.333 -08 000000042 INF: Swath 0: Converted transform from (-60.83849, 57.20818) pixels to (-0.021045, 0.019665) mm. 17-03-02 13:15:21.339 -08 000000042 INF: Swath 1: Converted transform from (-79.30307, 55.8237) pixels to (-0.027255, 0.01932) mm. 17-03-02 13:15:21.339 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-03-02 13:15:21.340 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-03-02 13:15:21.340 -08 000000042 INF: Transformed XStagePosition from 71.39664 mm to 71.3755919635296 mm. 17-03-02 13:15:21.351 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5727543545663 mm. 17-03-02 13:15:21.351 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3727543545663 mm. 17-03-02 13:15:21.351 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4635043545663 mm. 17-03-02 13:15:21.353 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:21.353 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left=================== 17-03-02 13:15:21.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:21.354 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:15:21.354 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:21.354 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1 17-03-02 13:15:21.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:21.360 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:21.360 -08 000000094 INF: ===================MoveEmissionFilters=================== 17-03-02 13:15:21.361 -08 000000109 INF: ===================Move X,Y=================== 17-03-02 13:15:21.361 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:21.361 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:21.361 -08 000000109 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:15:21.361 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:21.361 -08 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:21.362 -08 000000052 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:21.362 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:21.362 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:21.362 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-03-02 13:15:21.362 -08 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:21.362 -08 000000036 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:15:21.362 -08 000000052 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:21.363 -08 000000036 INF: Z Motor: Moving to -0.1528 mm, started at -0.0100 mm 17-03-02 13:15:21.363 -08 000000036 INF: FPGA: Xmit ZTRG 0\n 17-03-02 13:15:21.363 -08 000000096 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:15:21.363 -08 000000030 INF: ===================Move X Motor without settling=================== 17-03-02 13:15:21.363 -08 000000102 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:21.363 -08 000000097 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:15:21.363 -08 000000030 INF: X Motor: Xmit PR VM\n 17-03-02 13:15:21.363 -08 000000099 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:15:21.363 -08 000000102 INF: Y Motor: Moving to 64.5728 mm @25.000 mm/sec, started at 62.9704 mm 17-03-02 13:15:21.363 -08 000000050 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:15:21.363 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:15:21.364 -08 000000100 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:15:21.364 -08 000000099 INF: ====================================== 17-03-02 13:15:21.364 -08 000000097 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:15:21.364 -08 000000078 INF: ====================================== 17-03-02 13:15:21.364 -08 000000097 INF: ====================================== 17-03-02 13:15:21.364 -08 000000096 INF: ====================================== 17-03-02 13:15:21.364 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:21.364 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:21.366 -08 000000100 INF: ====================================== 17-03-02 13:15:21.367 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:21.367 -08 000000078 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:15:21.367 -08 000000045 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:15:21.367 -08 000000078 INF: ====================================== 17-03-02 13:15:21.367 -08 000000045 INF: ====================================== 17-03-02 13:15:21.368 -08 000000050 INF: ====================================== 17-03-02 13:15:21.368 -08 000000066 INF: ====================================== 17-03-02 13:15:21.368 -08 000000052 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:21.369 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:21.369 -08 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:21.369 -08 000000052 INF: ====================================== 17-03-02 13:15:21.370 -08 000000105 INF: ====================================== 17-03-02 13:15:21.370 -08 000000056 INF: ====================================== 17-03-02 13:15:21.371 -08 000000094 INF: ====================================== 17-03-02 13:15:21.440 -08 000000101 INF: FPGA: Recv ZTRG 17-03-02 13:15:21.440 -08 000000036 INF: FPGA: Xmit ZYT 0 3\n 17-03-02 13:15:21.442 -08 000000102 INF: Y Motor: Recv ok\r 17-03-02 13:15:21.442 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:21.442 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:21.442 -08 000000030 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:15:21.442 -08 000000030 INF: X Motor: Xmit PR VI\n 17-03-02 13:15:21.502 -08 000000044 INF: FPGA: Recv ZYT 17-03-02 13:15:21.502 -08 000000036 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-03-02 13:15:21.502 -08 000000036 INF: FPGA: Xmit ZMV 40055\n 17-03-02 13:15:21.504 -08 000000030 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:15:21.504 -08 000000030 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:15:21.504 -08 000000102 INF: Y Motor: Recv ok\r 17-03-02 13:15:21.504 -08 000000102 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:21.504 -08 000000030 INF: X Motor: Moving to 71.3756 mm @15.000 mm/sec, started at 71.9517 mm 17-03-02 13:15:21.504 -08 000000030 INF: X Motor: Xmit MA 5069\n 17-03-02 13:15:21.567 -08 000000078 INF: FPGA: Recv @LOG Trigger Camera 17-03-02 13:15:21.567 -08 000000006 INF: FPGA: Trigger Camera 17-03-02 13:15:21.569 -08 000000102 INF: Y Motor: Recv v 0\r 17-03-02 13:15:21.569 -08 000000030 INF: X Motor: Recv MA 5069\r\n> 17-03-02 13:15:21.569 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:21.569 -08 000000030 INF: X Motor: WaitUntilStopped 60038 17-03-02 13:15:21.569 -08 000000102 INF: Y Motor: Set target position to 5957275 encoder counts 17-03-02 13:15:21.569 -08 000000102 INF: Y Motor: Xmit s r0xca 5957275\r 17-03-02 13:15:21.631 -08 000000102 INF: Y Motor: Recv ok\r 17-03-02 13:15:21.631 -08 000000102 INF: Y Motor: Start the move command 17-03-02 13:15:21.631 -08 000000102 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:21.692 -08 000000071 INF: FPGA: Recv ZMV 17-03-02 13:15:21.692 -08 000000036 INF: Z Motor: MoveAndTrigger 'ZMV' command took 189.7835 ms 17-03-02 13:15:21.692 -08 000000036 INF: FPGA: Xmit ZDACR\n 17-03-02 13:15:21.693 -08 000000102 INF: Y Motor: Recv ok\r 17-03-02 13:15:21.693 -08 000000102 INF: Y Motor: WaitUntilStopped 60064 17-03-02 13:15:21.693 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:21.753 -08 000000076 INF: FPGA: Recv ZDACR 40055 17-03-02 13:15:21.753 -08 000000036 INF: Z Motor: MoveAndTrigger took 389.4623 ms w/comms 17-03-02 13:15:21.753 -08 000000036 INF: Z Motor: After move to -0.1528, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:21.753 -08 000000036 INF: Z Motor: MoveAbsStepped took 389.617 ms 17-03-02 13:15:21.753 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:21.755 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-03-02 13:15:21.756 -08 000000056 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:21.756 -08 000000086 INF: ===================Camera Arm TDI=================== 17-03-02 13:15:21.756 -08 000000056 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:21.757 -08 000000086 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:21.757 -08 000000056 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:15:21.758 -08 000000086 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:21.758 -08 000000056 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:21.758 -08 000000056 INF: FPGA: Xmit ZSEL 3\n 17-03-02 13:15:21.815 -08 000000065 INF: FPGA: Recv ZSEL 17-03-02 13:15:21.815 -08 000000056 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:21.816 -08 000000056 INF: FPGA: Xmit TDIBB 1\n 17-03-02 13:15:21.817 -08 000000102 INF: Y Motor: Unshifted Position: 5878546 17-03-02 13:15:21.867 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:21.877 -08 000000033 INF: FPGA: Recv TDIBB 17-03-02 13:15:21.877 -08 000000056 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:21.878 -08 000000056 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:15:21.879 -08 000000056 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:21.880 -08 000000056 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-03-02 13:15:21.881 -08 000000056 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-03-02 13:15:21.881 -08 000000056 INF: FPGA: Xmit ZSTEP 1792263\n 17-03-02 13:15:21.939 -08 000000047 INF: FPGA: Recv ZSTEP 17-03-02 13:15:21.939 -08 000000056 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:21.941 -08 000000056 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:15:21.941 -08 000000056 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:21.943 -08 000000056 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:15:21.943 -08 000000056 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:15:21.943 -08 000000056 INF: Z Motor: Arming to move to -0.1128 mm 17-03-02 13:15:21.943 -08 000000056 INF: FPGA: Xmit ZYT 6437275 4\n 17-03-02 13:15:21.991 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:22.001 -08 000000129 INF: FPGA: Recv ZYT 17-03-02 13:15:22.001 -08 000000056 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378546 enc / 63.785 mm / ) = 6437275 enc / 64.373 mm 17-03-02 13:15:22.001 -08 000000056 INF: FPGA: Xmit ZARM 29570\n 17-03-02 13:15:22.003 -08 000000030 INF: X Motor: Xmit PR ER\n 17-03-02 13:15:22.066 -08 000000068 INF: FPGA: Recv ZARM 17-03-02 13:15:22.066 -08 000000056 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.2426 ms 17-03-02 13:15:22.066 -08 000000056 INF: Z Motor: ArmAbsStepped took 123.0682 ms 17-03-02 13:15:22.066 -08 000000056 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:22.068 -08 000000030 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:15:22.068 -08 000000030 INF: X Motor: Moved to 71.3755 after 498 ms 17-03-02 13:15:22.068 -08 000000056 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:22.068 -08 000000030 INF: ====================================== 17-03-02 13:15:22.069 -08 000000056 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:15:22.070 -08 000000056 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:22.071 -08 000000056 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:15:22.072 -08 000000056 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:22.073 -08 000000056 INF: ====================================== 17-03-02 13:15:22.130 -08 000000102 INF: Y Motor: Unshifted Position: 5957276 17-03-02 13:15:22.130 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:22.130 -08 000000102 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:22.192 -08 000000102 INF: Y Motor: Recv v 0\r 17-03-02 13:15:22.192 -08 000000102 INF: Y Motor: Moved to 64.5728 after 498 ms 17-03-02 13:15:22.192 -08 000000102 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:22.254 -08 000000102 INF: Y Motor: Recv v 4096\r 17-03-02 13:15:22.254 -08 000000102 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:22.254 -08 000000102 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:22.316 -08 000000102 INF: Y Motor: Recv v 0\r 17-03-02 13:15:22.316 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:22.316 -08 000000102 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:22.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:22.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left=================== 17-03-02 13:15:22.379 -08 000000102 INF: Y Motor: Recv v 402653184\r 17-03-02 13:15:22.379 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:15:22.379 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:22.379 -08 000000102 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:22.441 -08 000000102 INF: Y Motor: Recv v 0\r 17-03-02 13:15:22.441 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:22.441 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:22.441 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:22.503 -08 000000102 INF: Y Motor: Recv ok\r 17-03-02 13:15:22.503 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:22.503 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:22.565 -08 000000102 INF: Y Motor: Recv ok\r 17-03-02 13:15:22.565 -08 000000102 INF: ====================================== 17-03-02 13:15:22.566 -08 000000109 INF: ===================Move X,Y=================== 17-03-02 13:15:22.567 -08 000000109 INF: ====================================== 17-03-02 13:15:22.745 -08 000000086 INF: Camera #0 AttachBuffer (imageDataPtr = 56926539824 imgPtr = 56926539824 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:15:22.745 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:15:22.745 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:22.760 -08 000000086 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:22.762 -08 000000086 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:23.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:23.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left=================== 17-03-02 13:15:23.799 -08 000000086 INF: Camera #2 AttachBuffer (imageDataPtr = 64223121456 imgPtr = 65129091120 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:15:23.799 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:15:23.799 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:23.814 -08 000000086 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:23.816 -08 000000086 INF: ===================Camera Arm TDI=================== 17-03-02 13:15:23.817 -08 000000086 INF: ====================================== 17-03-02 13:15:23.818 -08 000000036 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:23.819 -08 000000036 INF: ====================================== 17-03-02 13:15:23.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:23.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:23.821 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-03-02 13:15:23.821 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-03-02 13:15:23.876 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:15:23.876 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-03-02 13:15:23.936 -08 000000101 INF: FPGA: Recv ZFREQCL 17-03-02 13:15:23.936 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:15:23.936 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:23.936 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:23.998 -08 000000078 INF: FPGA: Recv TDIYERD 6457276 17-03-02 13:15:23.998 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457276 counts (64.573 mm) 17-03-02 13:15:23.998 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:23.999 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:23.999 -08 000000030 INF: ===================TDI FPGA Arm=================== 17-03-02 13:15:23.999 -08 000000047 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:15:24.000 -08 000000047 INF: ====================================== 17-03-02 13:15:24.000 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:24.001 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:15:24.001 -08 000000030 INF: FPGA: Xmit TDIYPOS 6346350\n 17-03-02 13:15:24.063 -08 000000044 INF: FPGA: Recv TDIYPOS 17-03-02 13:15:24.063 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:24.064 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:15:24.065 -08 000000030 INF: FPGA: Xmit TDIYARM3 139264 6437275 1 1\n 17-03-02 13:15:24.125 -08 000000095 INF: FPGA: Recv TDIYARM3 17-03-02 13:15:24.125 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:24.126 -08 000000030 INF: ===================TDI FPGA Arm=================== 17-03-02 13:15:24.127 -08 000000030 INF: ====================================== 17-03-02 13:15:24.128 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:24.129 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:24.129 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:24.129 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:24.130 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:24.131 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:15:24.131 -08 000000025 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:15:24.131 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:15:24.131 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:15:24.131 -08 000000078 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:15:24.131 -08 000000025 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:15:24.131 -08 000000025 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:15:24.131 -08 000000025 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:15:24.131 -08 000000078 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:15:24.134 -08 000000025 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:15:24.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:24.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:24.354 -08 000000018 INF: WaitCommand(5000) end 17-03-02 13:15:24.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:24.453 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:15:24.497 -08 000000097 INF: FPGA: Recv EX2MV 17-03-02 13:15:24.497 -08 000000097 INF: FPGA: Recv EX1MV 17-03-02 13:15:24.497 -08 000000025 INF: Excitation Filter 1: Moved -107 steps in 365.6981 ms 17-03-02 13:15:24.497 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 365.8769 ms 17-03-02 13:15:24.497 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.0057 ms 17-03-02 13:15:24.497 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.0784 ms 17-03-02 13:15:24.497 -08 000000025 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.8156 ms 17-03-02 13:15:24.497 -08 000000025 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.1947 ms 17-03-02 13:15:24.497 -08 000000078 INF: ====================================== 17-03-02 13:15:24.498 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF) 17-03-02 13:15:24.498 -08 000000025 INF: ====================================== 17-03-02 13:15:24.498 -08 000000018 INF: Current Position of Pump is: 11904 17-03-02 13:15:24.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:24.500 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:24.500 -08 000000088 INF: ===================Camera TDI=================== 17-03-02 13:15:24.500 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:24.500 -08 000000100 INF: ===================FPGA Z Wait=================== 17-03-02 13:15:24.500 -08 000000116 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:24.501 -08 000000100 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:15:24.501 -08 000000116 INF: Y Motor: Moving to 14.9244 mm @6.500 mm/sec, started at 64.5728 mm 17-03-02 13:15:24.501 -08 000000116 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:24.501 -08 000000116 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:24.501 -08 000000088 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:15:24.501 -08 000000044 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:15:24.502 -08 000000044 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:15:24.502 -08 000000028 INF: ===================Camera TDI=================== 17-03-02 13:15:24.502 -08 000000009 INF: ===================Camera TDI=================== 17-03-02 13:15:24.503 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:24.503 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:24.504 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:24.504 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:24.564 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:15:24.564 -08 000000116 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:24.564 -08 000000116 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:24.598 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:15:24.626 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:15:24.626 -08 000000116 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:24.653 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:24.653 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:24.654 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:24.654 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:24.688 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF) 17-03-02 13:15:24.688 -08 000000018 INF: Current Position of Pump is: 11904 17-03-02 13:15:24.688 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC=================== 17-03-02 13:15:24.689 -08 000000116 INF: Y Motor: Recv v 0\r 17-03-02 13:15:24.689 -08 000000116 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:24.689 -08 000000116 INF: Y Motor: Set target position to 992442 encoder counts 17-03-02 13:15:24.689 -08 000000116 INF: Y Motor: Xmit s r0xca 992442\r 17-03-02 13:15:24.750 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:15:24.750 -08 000000116 INF: Y Motor: Start the move command 17-03-02 13:15:24.750 -08 000000116 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:24.788 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11904R\r 17-03-02 13:15:24.803 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:24.803 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:24.804 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:24.804 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:24.812 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:15:24.812 -08 000000116 INF: Y Motor: WaitUntilStopped 67638 17-03-02 13:15:24.812 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:24.873 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:24.873 -08 000000131 INF: FPGA: Recv ZWAIT 17-03-02 13:15:24.873 -08 000000100 INF: ====================================== 17-03-02 13:15:24.938 -08 000000116 INF: Y Motor: Unshifted Position: 5895422 17-03-02 13:15:24.953 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:15:24.953 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:15:24.953 -08 000000009 INF: ===================Camera #2 Frame #4=================== 17-03-02 13:15:24.954 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:15:24.954 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:15:24.954 -08 000000028 INF: ===================Camera #0 Frame #4=================== 17-03-02 13:15:24.973 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:24.988 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:25.062 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:25.113 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:25.116 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-03-02 13:15:25.116 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-03-02 13:15:25.116 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-03-02 13:15:25.116 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-03-02 13:15:25.116 -08 000000028 INF: ===================Camera #0 Frame #10=================== 17-03-02 13:15:25.116 -08 000000009 INF: ===================Camera #2 Frame #10=================== 17-03-02 13:15:25.249 -08 000000116 INF: Y Motor: Unshifted Position: 5691760 17-03-02 13:15:25.284 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:15:25.284 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:15:25.284 -08 000000028 INF: ===================Camera #0 Frame #17=================== 17-03-02 13:15:25.285 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:15:25.285 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:15:25.285 -08 000000009 INF: ===================Camera #2 Frame #17=================== 17-03-02 13:15:25.299 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:25.312 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:25.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:25.423 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:25.455 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-03-02 13:15:25.455 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-03-02 13:15:25.455 -08 000000028 INF: ===================Camera #0 Frame #23=================== 17-03-02 13:15:25.457 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-03-02 13:15:25.457 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-03-02 13:15:25.457 -08 000000009 INF: ===================Camera #2 Frame #23=================== 17-03-02 13:15:25.562 -08 000000116 INF: Y Motor: Unshifted Position: 5488315 17-03-02 13:15:25.612 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:25.622 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:25.623 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-03-02 13:15:25.623 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-03-02 13:15:25.623 -08 000000028 INF: ===================Camera #0 Frame #29=================== 17-03-02 13:15:25.626 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-03-02 13:15:25.626 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-03-02 13:15:25.626 -08 000000009 INF: ===================Camera #2 Frame #29=================== 17-03-02 13:15:25.685 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:25.736 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:25.791 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-03-02 13:15:25.791 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-03-02 13:15:25.791 -08 000000028 INF: ===================Camera #0 Frame #35=================== 17-03-02 13:15:25.795 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-03-02 13:15:25.795 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-03-02 13:15:25.795 -08 000000009 INF: ===================Camera #2 Frame #35=================== 17-03-02 13:15:25.872 -08 000000116 INF: Y Motor: Unshifted Position: 5286807 17-03-02 13:15:25.922 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:25.935 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:25.959 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41. 17-03-02 13:15:25.959 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41 17-03-02 13:15:25.959 -08 000000028 INF: ===================Camera #0 Frame #41=================== 17-03-02 13:15:25.964 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:15:25.964 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:15:25.964 -08 000000009 INF: ===================Camera #2 Frame #42=================== 17-03-02 13:15:25.998 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:26.049 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:26.127 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-03-02 13:15:26.127 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-03-02 13:15:26.127 -08 000000028 INF: ===================Camera #0 Frame #48=================== 17-03-02 13:15:26.137 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-03-02 13:15:26.137 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-03-02 13:15:26.137 -08 000000009 INF: ===================Camera #2 Frame #48=================== 17-03-02 13:15:26.185 -08 000000116 INF: Y Motor: Unshifted Position: 5083141 17-03-02 13:15:26.235 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:26.248 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:26.299 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-03-02 13:15:26.299 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-03-02 13:15:26.299 -08 000000028 INF: ===================Camera #0 Frame #54=================== 17-03-02 13:15:26.307 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-03-02 13:15:26.307 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-03-02 13:15:26.307 -08 000000009 INF: ===================Camera #2 Frame #54=================== 17-03-02 13:15:26.308 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:26.359 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:26.468 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60. 17-03-02 13:15:26.468 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60 17-03-02 13:15:26.468 -08 000000028 INF: ===================Camera #0 Frame #60=================== 17-03-02 13:15:26.477 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:15:26.477 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:15:26.477 -08 000000009 INF: ===================Camera #2 Frame #61=================== 17-03-02 13:15:26.496 -08 000000116 INF: Y Motor: Unshifted Position: 4880985 17-03-02 13:15:26.546 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:26.558 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:26.622 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:26.637 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66. 17-03-02 13:15:26.637 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66 17-03-02 13:15:26.637 -08 000000028 INF: ===================Camera #0 Frame #66=================== 17-03-02 13:15:26.650 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:15:26.650 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:15:26.650 -08 000000009 INF: ===================Camera #2 Frame #67=================== 17-03-02 13:15:26.673 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:26.806 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-03-02 13:15:26.806 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-03-02 13:15:26.806 -08 000000028 INF: ===================Camera #0 Frame #73=================== 17-03-02 13:15:26.809 -08 000000116 INF: Y Motor: Unshifted Position: 4676668 17-03-02 13:15:26.820 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-03-02 13:15:26.820 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-03-02 13:15:26.820 -08 000000009 INF: ===================Camera #2 Frame #73=================== 17-03-02 13:15:26.859 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:26.872 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:26.932 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:26.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-03-02 13:15:26.932 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-02 13:15:26.977 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-03-02 13:15:26.977 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-03-02 13:15:26.977 -08 000000028 INF: ===================Camera #0 Frame #79=================== 17-03-02 13:15:26.983 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:26.990 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-03-02 13:15:26.990 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-03-02 13:15:26.990 -08 000000009 INF: ===================Camera #2 Frame #79=================== 17-03-02 13:15:27.122 -08 000000116 INF: Y Motor: Unshifted Position: 4473862 17-03-02 13:15:27.146 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85. 17-03-02 13:15:27.146 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85 17-03-02 13:15:27.146 -08 000000028 INF: ===================Camera #0 Frame #85=================== 17-03-02 13:15:27.160 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:15:27.160 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:15:27.160 -08 000000009 INF: ===================Camera #2 Frame #86=================== 17-03-02 13:15:27.172 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:27.296 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:27.315 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91. 17-03-02 13:15:27.315 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91 17-03-02 13:15:27.315 -08 000000028 INF: ===================Camera #0 Frame #91=================== 17-03-02 13:15:27.334 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:15:27.334 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:15:27.334 -08 000000009 INF: ===================Camera #2 Frame #92=================== 17-03-02 13:15:27.432 -08 000000116 INF: Y Motor: Unshifted Position: 4272364 17-03-02 13:15:27.482 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:27.483 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-03-02 13:15:27.483 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-03-02 13:15:27.483 -08 000000028 INF: ===================Camera #0 Frame #98=================== 17-03-02 13:15:27.505 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-03-02 13:15:27.505 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-03-02 13:15:27.505 -08 000000009 INF: ===================Camera #2 Frame #98=================== 17-03-02 13:15:27.609 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:27.656 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104. 17-03-02 13:15:27.656 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104 17-03-02 13:15:27.656 -08 000000028 INF: ===================Camera #0 Frame #104=================== 17-03-02 13:15:27.676 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-03-02 13:15:27.676 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-03-02 13:15:27.676 -08 000000009 INF: ===================Camera #2 Frame #105=================== 17-03-02 13:15:27.745 -08 000000116 INF: Y Motor: Unshifted Position: 4068692 17-03-02 13:15:27.795 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:27.826 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110. 17-03-02 13:15:27.826 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110 17-03-02 13:15:27.826 -08 000000028 INF: ===================Camera #0 Frame #110=================== 17-03-02 13:15:27.850 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:15:27.850 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:15:27.850 -08 000000009 INF: ===================Camera #2 Frame #111=================== 17-03-02 13:15:27.919 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:27.996 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116. 17-03-02 13:15:27.996 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116 17-03-02 13:15:27.996 -08 000000028 INF: ===================Camera #0 Frame #116=================== 17-03-02 13:15:28.021 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-03-02 13:15:28.021 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-03-02 13:15:28.021 -08 000000009 INF: ===================Camera #2 Frame #117=================== 17-03-02 13:15:28.032 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-03-02 13:15:28.057 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:28.058 -08 000000116 INF: Y Motor: Unshifted Position: 3865029 17-03-02 13:15:28.108 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:28.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:28.165 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-03-02 13:15:28.165 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-03-02 13:15:28.165 -08 000000028 INF: ===================Camera #0 Frame #123=================== 17-03-02 13:15:28.193 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-03-02 13:15:28.193 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-03-02 13:15:28.193 -08 000000009 INF: ===================Camera #2 Frame #124=================== 17-03-02 13:15:28.232 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:28.243 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:28.338 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129. 17-03-02 13:15:28.338 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129 17-03-02 13:15:28.338 -08 000000028 INF: ===================Camera #0 Frame #129=================== 17-03-02 13:15:28.367 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:15:28.367 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:15:28.367 -08 000000009 INF: ===================Camera #2 Frame #130=================== 17-03-02 13:15:28.368 -08 000000116 INF: Y Motor: Unshifted Position: 3663528 17-03-02 13:15:28.418 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:28.493 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:28.508 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135. 17-03-02 13:15:28.508 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135 17-03-02 13:15:28.508 -08 000000028 INF: ===================Camera #0 Frame #135=================== 17-03-02 13:15:28.538 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-03-02 13:15:28.538 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-03-02 13:15:28.538 -08 000000009 INF: ===================Camera #2 Frame #136=================== 17-03-02 13:15:28.546 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:28.559 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:28.559 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:28.559 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 17-03-02 13:15:28.677 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-03-02 13:15:28.677 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-03-02 13:15:28.677 -08 000000028 INF: ===================Camera #0 Frame #142=================== 17-03-02 13:15:28.681 -08 000000116 INF: Y Motor: Unshifted Position: 3460080 17-03-02 13:15:28.709 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-03-02 13:15:28.709 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-03-02 13:15:28.709 -08 000000009 INF: ===================Camera #2 Frame #143=================== 17-03-02 13:15:28.731 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:28.848 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148. 17-03-02 13:15:28.848 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148 17-03-02 13:15:28.848 -08 000000028 INF: ===================Camera #0 Frame #148=================== 17-03-02 13:15:28.855 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:28.883 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-03-02 13:15:28.883 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-03-02 13:15:28.883 -08 000000009 INF: ===================Camera #2 Frame #149=================== 17-03-02 13:15:28.995 -08 000000116 INF: Y Motor: Unshifted Position: 3258364 17-03-02 13:15:29.018 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154. 17-03-02 13:15:29.018 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154 17-03-02 13:15:29.018 -08 000000028 INF: ===================Camera #0 Frame #154=================== 17-03-02 13:15:29.045 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:29.053 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:29.053 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:29.054 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:15:29.054 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:15:29.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:29.054 -08 000000018 INF: WaitCommand(10000) start 17-03-02 13:15:29.054 -08 000000009 INF: ===================Camera #2 Frame #155=================== 17-03-02 13:15:29.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left=================== 17-03-02 13:15:29.171 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:29.188 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160. 17-03-02 13:15:29.188 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160 17-03-02 13:15:29.188 -08 000000028 INF: ===================Camera #0 Frame #160=================== 17-03-02 13:15:29.224 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-03-02 13:15:29.224 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-03-02 13:15:29.224 -08 000000009 INF: ===================Camera #2 Frame #162=================== 17-03-02 13:15:29.305 -08 000000116 INF: Y Motor: Unshifted Position: 3054051 17-03-02 13:15:29.355 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:29.358 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167. 17-03-02 13:15:29.358 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167 17-03-02 13:15:29.358 -08 000000028 INF: ===================Camera #0 Frame #167=================== 17-03-02 13:15:29.398 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:15:29.398 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:15:29.398 -08 000000009 INF: ===================Camera #2 Frame #168=================== 17-03-02 13:15:29.479 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:29.531 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173. 17-03-02 13:15:29.531 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173 17-03-02 13:15:29.531 -08 000000028 INF: ===================Camera #0 Frame #173=================== 17-03-02 13:15:29.569 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:15:29.569 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:15:29.569 -08 000000009 INF: ===================Camera #2 Frame #174=================== 17-03-02 13:15:29.619 -08 000000116 INF: Y Motor: Unshifted Position: 2852552 17-03-02 13:15:29.669 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:29.701 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179. 17-03-02 13:15:29.701 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179 17-03-02 13:15:29.701 -08 000000028 INF: ===================Camera #0 Frame #179=================== 17-03-02 13:15:29.740 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-03-02 13:15:29.740 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-03-02 13:15:29.740 -08 000000009 INF: ===================Camera #2 Frame #181=================== 17-03-02 13:15:29.793 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:29.871 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186. 17-03-02 13:15:29.871 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186 17-03-02 13:15:29.871 -08 000000028 INF: ===================Camera #0 Frame #186=================== 17-03-02 13:15:29.914 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:15:29.914 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:15:29.914 -08 000000009 INF: ===================Camera #2 Frame #187=================== 17-03-02 13:15:29.929 -08 000000116 INF: Y Motor: Unshifted Position: 2648244 17-03-02 13:15:29.979 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:30.045 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192. 17-03-02 13:15:30.045 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192 17-03-02 13:15:30.045 -08 000000028 INF: ===================Camera #0 Frame #192=================== 17-03-02 13:15:30.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:30.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left=================== 17-03-02 13:15:30.084 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:15:30.084 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:15:30.084 -08 000000009 INF: ===================Camera #2 Frame #193=================== 17-03-02 13:15:30.103 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:30.215 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198. 17-03-02 13:15:30.215 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198 17-03-02 13:15:30.215 -08 000000028 INF: ===================Camera #0 Frame #198=================== 17-03-02 13:15:30.243 -08 000000116 INF: Y Motor: Unshifted Position: 2446740 17-03-02 13:15:30.255 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-03-02 13:15:30.255 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-03-02 13:15:30.255 -08 000000009 INF: ===================Camera #2 Frame #200=================== 17-03-02 13:15:30.293 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:30.385 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204. 17-03-02 13:15:30.385 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204 17-03-02 13:15:30.385 -08 000000028 INF: ===================Camera #0 Frame #204=================== 17-03-02 13:15:30.417 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:30.429 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-03-02 13:15:30.429 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-03-02 13:15:30.429 -08 000000009 INF: ===================Camera #2 Frame #206=================== 17-03-02 13:15:30.552 -08 000000116 INF: Y Motor: Unshifted Position: 2243074 17-03-02 13:15:30.555 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211. 17-03-02 13:15:30.555 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211 17-03-02 13:15:30.555 -08 000000028 INF: ===================Camera #0 Frame #211=================== 17-03-02 13:15:30.600 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-03-02 13:15:30.600 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-03-02 13:15:30.600 -08 000000009 INF: ===================Camera #2 Frame #212=================== 17-03-02 13:15:30.602 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:30.728 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217. 17-03-02 13:15:30.728 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217 17-03-02 13:15:30.728 -08 000000028 INF: ===================Camera #0 Frame #217=================== 17-03-02 13:15:30.729 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:30.771 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-03-02 13:15:30.771 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-03-02 13:15:30.771 -08 000000009 INF: ===================Camera #2 Frame #219=================== 17-03-02 13:15:30.865 -08 000000116 INF: Y Motor: Unshifted Position: 2039623 17-03-02 13:15:30.898 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223. 17-03-02 13:15:30.898 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223 17-03-02 13:15:30.898 -08 000000028 INF: ===================Camera #0 Frame #223=================== 17-03-02 13:15:30.915 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:30.945 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-03-02 13:15:30.945 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-03-02 13:15:30.945 -08 000000009 INF: ===================Camera #2 Frame #225=================== 17-03-02 13:15:31.039 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:31.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:31.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left=================== 17-03-02 13:15:31.068 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230. 17-03-02 13:15:31.068 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230 17-03-02 13:15:31.068 -08 000000028 INF: ===================Camera #0 Frame #230=================== 17-03-02 13:15:31.116 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-03-02 13:15:31.116 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-03-02 13:15:31.116 -08 000000009 INF: ===================Camera #2 Frame #231=================== 17-03-02 13:15:31.179 -08 000000116 INF: Y Motor: Unshifted Position: 1837905 17-03-02 13:15:31.229 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:31.241 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236. 17-03-02 13:15:31.241 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236 17-03-02 13:15:31.241 -08 000000028 INF: ===================Camera #0 Frame #236=================== 17-03-02 13:15:31.287 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-03-02 13:15:31.287 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-03-02 13:15:31.287 -08 000000009 INF: ===================Camera #2 Frame #238=================== 17-03-02 13:15:31.353 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:31.412 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242. 17-03-02 13:15:31.412 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242 17-03-02 13:15:31.412 -08 000000028 INF: ===================Camera #0 Frame #242=================== 17-03-02 13:15:31.462 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-03-02 13:15:31.462 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-03-02 13:15:31.462 -08 000000009 INF: ===================Camera #2 Frame #244=================== 17-03-02 13:15:31.490 -08 000000116 INF: Y Motor: Unshifted Position: 1633808 17-03-02 13:15:31.540 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:31.582 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248. 17-03-02 13:15:31.582 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248 17-03-02 13:15:31.582 -08 000000028 INF: ===================Camera #0 Frame #248=================== 17-03-02 13:15:31.633 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-03-02 13:15:31.633 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-03-02 13:15:31.633 -08 000000009 INF: ===================Camera #2 Frame #250=================== 17-03-02 13:15:31.665 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:31.751 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-03-02 13:15:31.751 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-03-02 13:15:31.751 -08 000000028 INF: ===================Camera #0 Frame #255=================== 17-03-02 13:15:31.801 -08 000000116 INF: Y Motor: Unshifted Position: 1431428 17-03-02 13:15:31.804 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-03-02 13:15:31.804 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-03-02 13:15:31.804 -08 000000009 INF: ===================Camera #2 Frame #257=================== 17-03-02 13:15:31.851 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:31.924 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261. 17-03-02 13:15:31.924 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261 17-03-02 13:15:31.924 -08 000000028 INF: ===================Camera #0 Frame #261=================== 17-03-02 13:15:31.978 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:31.978 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-03-02 13:15:31.978 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-03-02 13:15:31.978 -08 000000009 INF: ===================Camera #2 Frame #263=================== 17-03-02 13:15:32.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:32.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left=================== 17-03-02 13:15:32.094 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267. 17-03-02 13:15:32.094 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267 17-03-02 13:15:32.094 -08 000000028 INF: ===================Camera #0 Frame #267=================== 17-03-02 13:15:32.114 -08 000000116 INF: Y Motor: Unshifted Position: 1227976 17-03-02 13:15:32.149 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-03-02 13:15:32.149 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-03-02 13:15:32.149 -08 000000009 INF: ===================Camera #2 Frame #269=================== 17-03-02 13:15:32.164 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:32.236 -08 000000025 INF: FPGA: Recv TDIYWAIT 17-03-02 13:15:32.236 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:32.238 -08 000000044 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:15:32.239 -08 000000099 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:15:32.239 -08 000000115 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:15:32.239 -08 000000099 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:15:32.239 -08 000000099 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:15:32.239 -08 000000099 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:15:32.239 -08 000000099 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:15:32.239 -08 000000115 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:15:32.239 -08 000000115 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:15:32.239 -08 000000115 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:15:32.242 -08 000000115 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:15:32.264 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:15:32.264 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:15:32.264 -08 000000028 INF: ===================Camera #0 Frame #272=================== 17-03-02 13:15:32.280 -08 000000028 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:15:32.281 -08 000000028 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:32.288 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:32.428 -08 000000116 INF: Y Motor: Unshifted Position: 1026266 17-03-02 13:15:32.447 -08 000000028 INF: Camera #0 ReleaseBuffer 17-03-02 13:15:32.447 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:15:32.447 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:15:32.447 -08 000000009 INF: ===================Camera #2 Frame #272=================== 17-03-02 13:15:32.447 -08 000000028 INF: ===================Camera TDI=================== 17-03-02 13:15:32.456 -08 000000009 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:15:32.457 -08 000000009 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:32.476 -08 000000028 INF: ====================================== 17-03-02 13:15:32.478 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:32.612 -08 000000054 INF: FPGA: Recv EX1MV 17-03-02 13:15:32.612 -08 000000054 INF: FPGA: Recv EX2MV 17-03-02 13:15:32.612 -08 000000115 INF: Excitation Filter 2: Moved 107 steps in 372.34 ms 17-03-02 13:15:32.612 -08 000000099 INF: Excitation Filter 1: Moved 107 steps in 372.5495 ms 17-03-02 13:15:32.612 -08 000000099 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.7096 ms 17-03-02 13:15:32.612 -08 000000099 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.7799 ms 17-03-02 13:15:32.612 -08 000000115 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.4879 ms 17-03-02 13:15:32.612 -08 000000115 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.8681 ms 17-03-02 13:15:32.612 -08 000000099 INF: ====================================== 17-03-02 13:15:32.613 -08 000000115 INF: ====================================== 17-03-02 13:15:32.614 -08 000000116 INF: Y Motor: Unshifted Position: 992442 17-03-02 13:15:32.614 -08 000000116 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:32.614 -08 000000116 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:32.614 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:32.615 -08 000000044 INF: ====================================== 17-03-02 13:15:32.659 -08 000000009 INF: Camera #2 ReleaseBuffer 17-03-02 13:15:32.659 -08 000000009 INF: ===================Camera TDI=================== 17-03-02 13:15:32.676 -08 000000116 INF: Y Motor: Recv v 0\r 17-03-02 13:15:32.676 -08 000000116 INF: Y Motor: Moved to 14.9244 after 7863 ms 17-03-02 13:15:32.676 -08 000000116 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:32.693 -08 000000009 INF: ====================================== 17-03-02 13:15:32.695 -08 000000088 INF: ===================Camera TDI=================== 17-03-02 13:15:32.696 -08 000000088 INF: ====================================== 17-03-02 13:15:32.738 -08 000000116 INF: Y Motor: Recv v 4097\r 17-03-02 13:15:32.738 -08 000000116 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:32.738 -08 000000116 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:32.800 -08 000000116 INF: Y Motor: Recv v 0\r 17-03-02 13:15:32.800 -08 000000116 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:32.800 -08 000000116 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:32.862 -08 000000116 INF: Y Motor: Recv v 134217728\r 17-03-02 13:15:32.862 -08 000000116 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:15:32.862 -08 000000116 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:32.862 -08 000000116 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:32.926 -08 000000116 INF: Y Motor: Recv v 0\r 17-03-02 13:15:32.926 -08 000000116 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:32.926 -08 000000116 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:32.926 -08 000000116 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:32.986 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:15:32.986 -08 000000116 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:32.986 -08 000000116 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:33.052 -08 000000116 INF: Y Motor: Recv ok\r 17-03-02 13:15:33.052 -08 000000116 INF: ====================================== 17-03-02 13:15:33.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:33.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:33.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:33.055 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left=================== 17-03-02 13:15:33.055 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:15:33.109 -08 000000097 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:15:33.109 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:33.171 -08 000000131 INF: FPGA: Recv TDIYERD 1492443 17-03-02 13:15:33.171 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:15:33.236 -08 000000082 INF: FPGA: Recv ZADCR 34717 17-03-02 13:15:33.236 -08 000000042 INF: At scan end Y pos = 14.924 and Z pos = -0.133. Y moved -48.539 mm 17-03-02 13:15:33.236 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:15:33.298 -08 000000032 INF: FPGA: Recv TDIPULSES 139265 17-03-02 13:15:33.298 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-03-02 13:15:33.298 -08 000000042 INF: TDIScan finished after 11956.5934 ms 17-03-02 13:15:33.298 -08 000000042 INF: Image[0]: Y should trigger at 63.464 mm, 2nd row was at 64.372 mm (error = 0.909 mm) 17-03-02 13:15:33.298 -08 000000042 INF: Image[2]: Y should trigger at 63.464 mm, 2nd row was at 64.372 mm (error = 0.909 mm) 17-03-02 13:15:33.300 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.335 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.909 um 17-03-02 13:15:33.335 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.336 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:15:33.360 -08 000000111 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:15:33.360 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.361 -08 000000060 INF: ===================Dither Clean Up Command=================== 17-03-02 13:15:33.361 -08 000000074 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:15:33.361 -08 000000082 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:15:33.361 -08 000000072 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:15:33.362 -08 000000082 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:15:33.362 -08 000000082 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:15:33.362 -08 000000074 INF: ====================================== 17-03-02 13:15:33.362 -08 000000072 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:15:33.362 -08 000000072 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:15:33.362 -08 000000100 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:15:33.362 -08 000000078 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:33.363 -08 000000100 INF: FPGA: Xmit ZSEL 0\n 17-03-02 13:15:33.365 -08 000000078 INF: ===================LFT:Extracting coords=================== 17-03-02 13:15:33.391 -08 000000078 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:33.392 -08 000000078 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-03-02 13:15:33.393 -08 000000102 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:33.393 -08 000000030 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:33.393 -08 000000047 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:33.393 -08 000000029 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:33.393 -08 000000102 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:33.393 -08 000000030 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:33.393 -08 000000047 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:33.393 -08 000000029 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:33.424 -08 000000086 INF: FPGA: Recv ZSTEP 17-03-02 13:15:33.425 -08 000000086 INF: FPGA: Recv ZSEL 17-03-02 13:15:33.425 -08 000000082 INF: Y Motor: Recv ok\r 17-03-02 13:15:33.425 -08 000000100 INF: FPGA: Xmit ZDACW 40055\n 17-03-02 13:15:33.425 -08 000000072 INF: ====================================== 17-03-02 13:15:33.425 -08 000000082 INF: ====================================== 17-03-02 13:15:33.467 -08 000000030 INF: FC:B, C:162,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:33.467 -08 000000102 INF: FC:B, C:162,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:33.468 -08 000000029 INF: FC:B, C:162,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:33.474 -08 000000047 INF: FC:B, C:162,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:33.484 -08 000000028 INF: FPGA: Recv ZDACW 17-03-02 13:15:33.485 -08 000000100 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-03-02 13:15:33.485 -08 000000100 INF: FPGA: Xmit TDIBB 0\n 17-03-02 13:15:33.546 -08 000000104 INF: FPGA: Recv TDIBB 17-03-02 13:15:33.546 -08 000000100 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:15:33.547 -08 000000100 INF: ====================================== 17-03-02 13:15:33.619 -08 000000030 INF: LFT found best fwhm score 2.001305 in 152 ms 17-03-02 13:15:33.619 -08 000000030 INF: LFT found good score at index 353 with fwhm value 2.001305. Next cycle, cycle 163 starting Z position for top surface is at -0.157 mm FC:B, C:162,L:2,T 17-03-02 13:15:33.619 -08 000000102 INF: LFT found best fwhm score 2.018959 in 152 ms 17-03-02 13:15:33.619 -08 000000102 INF: LFT found good score at index 2577 with fwhm value 2.018959. Next cycle, cycle 163 starting Z position for top surface is at -0.156 mm FC:B, C:162,L:2,T 17-03-02 13:15:33.619 -08 000000030 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:33.619 -08 000000102 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:33.619 -08 000000030 INF: ====================================== 17-03-02 13:15:33.619 -08 000000102 INF: ====================================== 17-03-02 13:15:33.624 -08 000000029 INF: LFT found best fwhm score 2.000422 in 156 ms 17-03-02 13:15:33.624 -08 000000029 INF: LFT found good score at index 7465 with fwhm value 2.000422. Next cycle, cycle 163 starting Z position for top surface is at -0.155 mm FC:B, C:162,L:2,T 17-03-02 13:15:33.625 -08 000000029 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:33.625 -08 000000029 INF: ====================================== 17-03-02 13:15:33.638 -08 000000047 INF: LFT found best fwhm score 2.227647 in 164 ms 17-03-02 13:15:33.638 -08 000000047 INF: LFT found good score at index 5393 with fwhm value 2.227647. Next cycle, cycle 163 starting Z position for top surface is at -0.156 mm FC:B, C:162,L:2,T 17-03-02 13:15:33.638 -08 000000047 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:33.639 -08 000000047 INF: ====================================== 17-03-02 13:15:33.640 -08 000000078 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:33.641 -08 000000078 INF: LFT weighted average best Z for top surface is at -0.156mm FC:B, C:162,L:2,T 17-03-02 13:15:33.641 -08 000000078 INF: ====================================== 17-03-02 13:15:33.642 -08 000000060 INF: ====================================== 17-03-02 13:15:33.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:15:33.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:15:33.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:15:33.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:15:33.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.646 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-03-02 13:15:33.646 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-03-02 13:15:33.647 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left, Waiting for image analysis=================== 17-03-02 13:15:33.647 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left=================== 17-03-02 13:15:33.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Waiting for image analysis=================== 17-03-02 13:15:33.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-03-02 13:15:33.670 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 17-03-02 13:15:33.670 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:33.671 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-03-02 13:15:33.671 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:33.671 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-03-02 13:15:33.671 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-03-02 13:15:33.671 -08 000000042 INF: Transformed XStagePosition from 72.50464 mm to 72.4773836713284 mm. 17-03-02 13:15:33.683 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5724093554318 mm. 17-03-02 13:15:33.683 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3724093554318 mm. 17-03-02 13:15:33.683 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4631593554318 mm. 17-03-02 13:15:33.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:15:33.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:33.686 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -152.8 um, section = B_1 17-03-02 13:15:33.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:33.759 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:33.767 -08 000000105 INF: ===================Move X,Y=================== 17-03-02 13:15:33.768 -08 000000105 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:15:33.769 -08 000000045 INF: ===================MoveEmissionFilters=================== 17-03-02 13:15:33.771 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:33.771 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-03-02 13:15:33.772 -08 000000088 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:15:33.772 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:33.773 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-03-02 13:15:33.785 -08 000000095 INF: ===================Move X Motor without settling=================== 17-03-02 13:15:33.786 -08 000000095 INF: X Motor: Xmit PR VM\n 17-03-02 13:15:33.791 -08 000000100 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:33.791 -08 000000072 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:33.792 -08 000000054 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:33.792 -08 000000054 INF: Y Motor: Moving to 64.5724 mm @25.000 mm/sec, started at 14.9244 mm 17-03-02 13:15:33.792 -08 000000100 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:33.792 -08 000000054 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:33.792 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:33.793 -08 000000072 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:33.794 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:33.794 -08 000000044 INF: ===================Camera Arm TDI=================== 17-03-02 13:15:33.794 -08 000000100 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:15:33.795 -08 000000100 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:33.796 -08 000000091 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:33.796 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:33.796 -08 000000100 INF: FPGA: Xmit ZSEL 3\n 17-03-02 13:15:33.796 -08 000000044 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:33.797 -08 000000091 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:33.798 -08 000000027 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:33.798 -08 000000028 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:15:33.799 -08 000000044 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:33.799 -08 000000027 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:33.799 -08 000000028 INF: ====================================== 17-03-02 13:15:33.803 -08 000000050 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:15:33.806 -08 000000119 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:15:33.806 -08 000000082 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:15:33.807 -08 000000028 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:15:33.807 -08 000000110 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:15:33.807 -08 000000063 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:15:33.807 -08 000000119 INF: ====================================== 17-03-02 13:15:33.807 -08 000000028 INF: ====================================== 17-03-02 13:15:33.808 -08 000000070 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:15:33.808 -08 000000063 INF: ====================================== 17-03-02 13:15:33.809 -08 000000070 INF: ====================================== 17-03-02 13:15:33.810 -08 000000082 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:15:33.810 -08 000000050 INF: ====================================== 17-03-02 13:15:33.811 -08 000000110 INF: ====================================== 17-03-02 13:15:33.811 -08 000000082 INF: ====================================== 17-03-02 13:15:33.813 -08 000000091 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:33.813 -08 000000027 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:33.814 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:33.815 -08 000000036 INF: ====================================== 17-03-02 13:15:33.816 -08 000000091 INF: ====================================== 17-03-02 13:15:33.816 -08 000000027 INF: ====================================== 17-03-02 13:15:33.823 -08 000000072 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:33.826 -08 000000072 INF: ====================================== 17-03-02 13:15:33.828 -08 000000045 INF: ====================================== 17-03-02 13:15:33.837 -08 000000132 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1102 Request: {"Cycle":162,"Lane":2,"Tile":1102,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF243","HCSMMF206","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.907 -08 000000074 INF: FPGA: Recv ZSEL 17-03-02 13:15:33.908 -08 000000054 INF: Y Motor: Recv ok\r 17-03-02 13:15:33.908 -08 000000054 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:33.908 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:33.908 -08 000000095 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:15:33.908 -08 000000095 INF: X Motor: Xmit PR VI\n 17-03-02 13:15:33.910 -08 000000100 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:33.910 -08 000000100 INF: FPGA: Xmit TDIBB 1\n 17-03-02 13:15:33.939 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1103 Request: {"Cycle":162,"Lane":2,"Tile":1103,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF276","HCSMMF220","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.941 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1108 Request: {"Cycle":162,"Lane":2,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF240","HCSMMF263","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.942 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1106 Request: {"Cycle":162,"Lane":2,"Tile":1106,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF274","HCSMMF268","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.944 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1101 Request: {"Cycle":162,"Lane":2,"Tile":1101,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF269","HCSMMF287","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.945 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1105 Request: {"Cycle":162,"Lane":2,"Tile":1105,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF249","HCSMMF239","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.946 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1118 Request: {"Cycle":162,"Lane":2,"Tile":1118,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF218","HCSMMF198","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.950 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1111 Request: {"Cycle":162,"Lane":2,"Tile":1111,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF248","HCSMMF186","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.951 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1116 Request: {"Cycle":162,"Lane":2,"Tile":1116,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF219","HCSMMF190","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.952 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1107 Request: {"Cycle":162,"Lane":2,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF212","HCSMMF247","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.954 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1104 Request: {"Cycle":162,"Lane":2,"Tile":1104,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF207","HCSMMF260","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.954 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1115 Request: {"Cycle":162,"Lane":2,"Tile":1115,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF273","HCSMMF205","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.955 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1123 Request: {"Cycle":162,"Lane":2,"Tile":1123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF254","HCSMMF194","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.956 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1110 Request: {"Cycle":162,"Lane":2,"Tile":1110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF183","HCSMMF213","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.956 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1114 Request: {"Cycle":162,"Lane":2,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF179","HCSMMF200","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.957 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1120 Request: {"Cycle":162,"Lane":2,"Tile":1120,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF210","HCSMMF285","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.958 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1119 Request: {"Cycle":162,"Lane":2,"Tile":1119,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF245","HCSMMF228","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.959 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1112 Request: {"Cycle":162,"Lane":2,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF211","HCSMMF223","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.960 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1121 Request: {"Cycle":162,"Lane":2,"Tile":1121,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF188","HCSMMF208","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.961 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1117 Request: {"Cycle":162,"Lane":2,"Tile":1117,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF189","HCSMMF204","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.961 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1128 Request: {"Cycle":162,"Lane":2,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF229","HCSMMF286","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.962 -08 000000112 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1124 Request: {"Cycle":162,"Lane":2,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF226","HCSMMF196","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.963 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1126 Request: {"Cycle":162,"Lane":2,"Tile":1126,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF271","HCSMMF181","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.964 -08 000000116 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1122 Request: {"Cycle":162,"Lane":2,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF279","HCSMMF216","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.964 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1113 Request: {"Cycle":162,"Lane":2,"Tile":1113,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF199","HCSMMF187","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.965 -08 000000115 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1109 Request: {"Cycle":162,"Lane":2,"Tile":1109,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF264","HCSMMF246","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.967 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1125 Request: {"Cycle":162,"Lane":2,"Tile":1125,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF203","HCSMMF232","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.968 -08 000000031 INF: FPGA: Recv TDIBB 17-03-02 13:15:33.968 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1127 Request: {"Cycle":162,"Lane":2,"Tile":1127,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF278","HCSMMF250","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:33.968 -08 000000100 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:33.970 -08 000000095 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:15:33.970 -08 000000095 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:15:33.970 -08 000000054 INF: Y Motor: Recv ok\r 17-03-02 13:15:33.970 -08 000000054 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:33.970 -08 000000100 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:15:33.970 -08 000000095 INF: X Motor: Moving to 72.4774 mm @15.000 mm/sec, started at 71.3755 mm 17-03-02 13:15:33.970 -08 000000100 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:33.970 -08 000000095 INF: X Motor: Xmit MA 5520\n 17-03-02 13:15:33.972 -08 000000100 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-03-02 13:15:33.972 -08 000000100 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-03-02 13:15:33.972 -08 000000100 INF: FPGA: Xmit ZSTEP 1792263\n 17-03-02 13:15:33.978 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:33.984 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-03-02 13:15:34.030 -08 000000117 INF: FPGA: Recv ZSTEP 17-03-02 13:15:34.030 -08 000000100 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:34.032 -08 000000095 INF: X Motor: Recv MA 5520\r\n> 17-03-02 13:15:34.032 -08 000000054 INF: Y Motor: Recv v 0\r 17-03-02 13:15:34.032 -08 000000054 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:34.032 -08 000000095 INF: X Motor: WaitUntilStopped 60073 17-03-02 13:15:34.032 -08 000000054 INF: Y Motor: Set target position to 5957241 encoder counts 17-03-02 13:15:34.032 -08 000000054 INF: Y Motor: Xmit s r0xca 5957241\r 17-03-02 13:15:34.032 -08 000000100 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:15:34.032 -08 000000100 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:34.034 -08 000000100 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:15:34.034 -08 000000100 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:15:34.034 -08 000000100 INF: Z Motor: Arming to move to -0.1128 mm 17-03-02 13:15:34.034 -08 000000100 INF: FPGA: Xmit ZYT 6437241 4\n 17-03-02 13:15:34.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:34.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left=================== 17-03-02 13:15:34.083 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:34.083 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-03-02 13:15:34.092 -08 000000131 INF: FPGA: Recv ZYT 17-03-02 13:15:34.092 -08 000000100 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492442 enc / 14.924 mm / ) = 6437241 enc / 64.372 mm 17-03-02 13:15:34.092 -08 000000100 INF: FPGA: Xmit ZARM 29570\n 17-03-02 13:15:34.095 -08 000000054 INF: Y Motor: Recv ok\r 17-03-02 13:15:34.095 -08 000000054 INF: Y Motor: Start the move command 17-03-02 13:15:34.095 -08 000000054 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:34.123 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:34.128 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-03-02 13:15:34.154 -08 000000115 INF: FPGA: Recv ZARM 17-03-02 13:15:34.154 -08 000000100 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0765 ms 17-03-02 13:15:34.154 -08 000000100 INF: Z Motor: ArmAbsStepped took 119.6509 ms 17-03-02 13:15:34.154 -08 000000100 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:34.156 -08 000000054 INF: Y Motor: Recv ok\r 17-03-02 13:15:34.156 -08 000000100 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:34.156 -08 000000054 INF: Y Motor: WaitUntilStopped 61986 17-03-02 13:15:34.156 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:34.157 -08 000000100 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:15:34.158 -08 000000100 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:34.159 -08 000000100 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:15:34.160 -08 000000100 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:34.161 -08 000000100 INF: ====================================== 17-03-02 13:15:34.206 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:34.212 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-03-02 13:15:34.284 -08 000000054 INF: Y Motor: Unshifted Position: 1077824 17-03-02 13:15:34.297 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:34.302 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-03-02 13:15:34.334 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:34.398 -08 000000044 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:15:34.398 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:15:34.398 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:34.405 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:34.413 -08 000000044 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:34.415 -08 000000044 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:34.457 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:34.593 -08 000000054 INF: Y Motor: Unshifted Position: 1779100 17-03-02 13:15:34.643 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:34.655 -08 000000095 INF: X Motor: Xmit PR ER\n 17-03-02 13:15:34.690 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-03-02 13:15:34.720 -08 000000095 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:15:34.720 -08 000000095 INF: X Motor: Moved to 72.4766 after 688 ms 17-03-02 13:15:34.720 -08 000000095 INF: ====================================== 17-03-02 13:15:34.770 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:34.906 -08 000000054 INF: Y Motor: Unshifted Position: 2562457 17-03-02 13:15:34.956 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:35.013 -08 000000044 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:15:35.013 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:15:35.013 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:35.028 -08 000000044 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:35.030 -08 000000044 INF: ===================Camera Arm TDI=================== 17-03-02 13:15:35.031 -08 000000044 INF: ====================================== 17-03-02 13:15:35.032 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:35.034 -08 000000088 INF: ====================================== 17-03-02 13:15:35.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:35.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left=================== 17-03-02 13:15:35.080 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:35.218 -08 000000054 INF: Y Motor: Unshifted Position: 3347412 17-03-02 13:15:35.268 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:35.394 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:35.530 -08 000000054 INF: Y Motor: Unshifted Position: 4123310 17-03-02 13:15:35.580 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:35.705 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:35.841 -08 000000054 INF: Y Motor: Unshifted Position: 4903253 17-03-02 13:15:35.891 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:36.018 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:36.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:36.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left=================== 17-03-02 13:15:36.154 -08 000000054 INF: Y Motor: Unshifted Position: 5682650 17-03-02 13:15:36.204 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:36.330 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:36.467 -08 000000054 INF: Y Motor: Unshifted Position: 5957242 17-03-02 13:15:36.467 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:36.467 -08 000000054 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:36.529 -08 000000054 INF: Y Motor: Recv v 0\r 17-03-02 13:15:36.529 -08 000000054 INF: Y Motor: Moved to 64.5724 after 2373 ms 17-03-02 13:15:36.529 -08 000000054 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:36.592 -08 000000054 INF: Y Motor: Recv v 4096\r 17-03-02 13:15:36.592 -08 000000054 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:36.592 -08 000000054 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:36.654 -08 000000054 INF: Y Motor: Recv v 0\r 17-03-02 13:15:36.654 -08 000000054 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:36.654 -08 000000054 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:36.717 -08 000000054 INF: Y Motor: Recv v 402653184\r 17-03-02 13:15:36.717 -08 000000054 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:15:36.717 -08 000000054 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:36.717 -08 000000054 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:36.778 -08 000000054 INF: Y Motor: Recv v 0\r 17-03-02 13:15:36.778 -08 000000054 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:36.778 -08 000000054 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:36.778 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:36.840 -08 000000054 INF: Y Motor: Recv ok\r 17-03-02 13:15:36.840 -08 000000054 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:36.840 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:36.902 -08 000000054 INF: Y Motor: Recv ok\r 17-03-02 13:15:36.902 -08 000000054 INF: ====================================== 17-03-02 13:15:36.903 -08 000000105 INF: ===================Move X,Y=================== 17-03-02 13:15:36.904 -08 000000105 INF: ====================================== 17-03-02 13:15:36.906 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:36.906 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:36.906 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-03-02 13:15:36.907 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-03-02 13:15:36.964 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:15:36.964 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-03-02 13:15:37.025 -08 000000032 INF: FPGA: Recv ZFREQCL 17-03-02 13:15:37.025 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:15:37.025 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:37.026 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:37.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:37.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left=================== 17-03-02 13:15:37.089 -08 000000009 INF: FPGA: Recv TDIYERD 6457243 17-03-02 13:15:37.089 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457243 counts (64.572 mm) 17-03-02 13:15:37.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:37.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:37.091 -08 000000102 INF: ===================TDI FPGA Arm=================== 17-03-02 13:15:37.091 -08 000000068 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:15:37.092 -08 000000068 INF: ====================================== 17-03-02 13:15:37.092 -08 000000102 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:37.092 -08 000000102 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:15:37.093 -08 000000102 INF: FPGA: Xmit TDIYPOS 6346316\n 17-03-02 13:15:37.164 -08 000000028 INF: FPGA: Recv TDIYPOS 17-03-02 13:15:37.165 -08 000000102 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:37.167 -08 000000102 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:15:37.167 -08 000000102 INF: FPGA: Xmit TDIYARM3 139264 6437241 1 1\n 17-03-02 13:15:37.227 -08 000000117 INF: FPGA: Recv TDIYARM3 17-03-02 13:15:37.227 -08 000000102 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:37.229 -08 000000102 INF: ===================TDI FPGA Arm=================== 17-03-02 13:15:37.230 -08 000000102 INF: ====================================== 17-03-02 13:15:37.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:37.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:37.232 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:37.232 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:37.233 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:37.234 -08 000000044 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:15:37.234 -08 000000044 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:15:37.234 -08 000000044 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:15:37.234 -08 000000044 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:15:37.234 -08 000000044 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:15:37.234 -08 000000105 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:15:37.234 -08 000000105 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:15:37.234 -08 000000105 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:15:37.234 -08 000000105 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:15:37.235 -08 000000105 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:15:37.603 -08 000000054 INF: FPGA: Recv EX2MV 17-03-02 13:15:37.603 -08 000000054 INF: FPGA: Recv EX1MV 17-03-02 13:15:37.603 -08 000000105 INF: Excitation Filter 1: Moved -107 steps in 368.5422 ms 17-03-02 13:15:37.603 -08 000000044 INF: Excitation Filter 2: Moved -107 steps in 369.201 ms 17-03-02 13:15:37.603 -08 000000044 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.3337 ms 17-03-02 13:15:37.603 -08 000000044 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.4177 ms 17-03-02 13:15:37.603 -08 000000105 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.6912 ms 17-03-02 13:15:37.603 -08 000000105 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.1858 ms 17-03-02 13:15:37.604 -08 000000044 INF: ====================================== 17-03-02 13:15:37.604 -08 000000105 INF: ====================================== 17-03-02 13:15:37.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:37.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:37.609 -08 000000031 INF: ===================Camera TDI=================== 17-03-02 13:15:37.609 -08 000000071 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:37.609 -08 000000129 INF: ===================FPGA Z Wait=================== 17-03-02 13:15:37.609 -08 000000129 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:15:37.609 -08 000000030 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:37.609 -08 000000030 INF: Y Motor: Moving to 14.9241 mm @6.500 mm/sec, started at 64.5724 mm 17-03-02 13:15:37.609 -08 000000031 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:15:37.609 -08 000000071 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:15:37.610 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:37.610 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:37.610 -08 000000115 INF: ===================Camera TDI=================== 17-03-02 13:15:37.610 -08 000000098 INF: ===================Camera TDI=================== 17-03-02 13:15:37.612 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:37.612 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:37.612 -08 000000071 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:15:37.614 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:37.614 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:37.652 -08 000000030 INF: Y Motor: Recv ok\r 17-03-02 13:15:37.652 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:37.652 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:37.713 -08 000000030 INF: Y Motor: Recv ok\r 17-03-02 13:15:37.713 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:37.762 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:37.762 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:37.765 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:37.765 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:37.777 -08 000000030 INF: Y Motor: Recv v 0\r 17-03-02 13:15:37.777 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:37.777 -08 000000030 INF: Y Motor: Set target position to 992407 encoder counts 17-03-02 13:15:37.777 -08 000000030 INF: Y Motor: Xmit s r0xca 992407\r 17-03-02 13:15:37.838 -08 000000030 INF: Y Motor: Recv ok\r 17-03-02 13:15:37.838 -08 000000030 INF: Y Motor: Start the move command 17-03-02 13:15:37.838 -08 000000030 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:37.902 -08 000000030 INF: Y Motor: Recv ok\r 17-03-02 13:15:37.902 -08 000000030 INF: Y Motor: WaitUntilStopped 67638 17-03-02 13:15:37.902 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:37.912 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:37.912 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:37.916 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:37.916 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:37.993 -08 000000097 INF: FPGA: Recv ZWAIT 17-03-02 13:15:37.993 -08 000000129 INF: ====================================== 17-03-02 13:15:38.053 -08 000000030 INF: Y Motor: Unshifted Position: 5894739 17-03-02 13:15:38.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:38.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left=================== 17-03-02 13:15:38.062 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:15:38.062 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:15:38.062 -08 000000115 INF: ===================Camera #0 Frame #5=================== 17-03-02 13:15:38.066 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:15:38.066 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:15:38.066 -08 000000098 INF: ===================Camera #2 Frame #5=================== 17-03-02 13:15:38.103 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:38.215 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:38.227 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-03-02 13:15:38.227 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-03-02 13:15:38.227 -08 000000115 INF: ===================Camera #0 Frame #11=================== 17-03-02 13:15:38.232 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-03-02 13:15:38.232 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-03-02 13:15:38.232 -08 000000098 INF: ===================Camera #2 Frame #11=================== 17-03-02 13:15:38.353 -08 000000030 INF: Y Motor: Unshifted Position: 5680665 17-03-02 13:15:38.403 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:38.405 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18. 17-03-02 13:15:38.405 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18 17-03-02 13:15:38.405 -08 000000115 INF: ===================Camera #0 Frame #18=================== 17-03-02 13:15:38.410 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18. 17-03-02 13:15:38.410 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18 17-03-02 13:15:38.410 -08 000000098 INF: ===================Camera #2 Frame #18=================== 17-03-02 13:15:38.529 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:38.581 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24. 17-03-02 13:15:38.581 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24 17-03-02 13:15:38.581 -08 000000115 INF: ===================Camera #0 Frame #24=================== 17-03-02 13:15:38.592 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25. 17-03-02 13:15:38.592 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25 17-03-02 13:15:38.592 -08 000000098 INF: ===================Camera #2 Frame #25=================== 17-03-02 13:15:38.665 -08 000000030 INF: Y Motor: Unshifted Position: 5478532 17-03-02 13:15:38.715 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:38.756 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31. 17-03-02 13:15:38.756 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31 17-03-02 13:15:38.756 -08 000000115 INF: ===================Camera #0 Frame #31=================== 17-03-02 13:15:38.765 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31. 17-03-02 13:15:38.765 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31 17-03-02 13:15:38.765 -08 000000098 INF: ===================Camera #2 Frame #31=================== 17-03-02 13:15:38.841 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:38.934 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37. 17-03-02 13:15:38.934 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37 17-03-02 13:15:38.934 -08 000000115 INF: ===================Camera #0 Frame #37=================== 17-03-02 13:15:38.943 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38. 17-03-02 13:15:38.943 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38 17-03-02 13:15:38.943 -08 000000098 INF: ===================Camera #2 Frame #38=================== 17-03-02 13:15:38.979 -08 000000030 INF: Y Motor: Unshifted Position: 5276370 17-03-02 13:15:39.029 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:39.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:39.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock, Delay 0 of 10 seconds left=================== 17-03-02 13:15:39.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:39.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:39.056 -08 000000018 INF: WaitCommand(10000) end 17-03-02 13:15:39.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:39.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Deblock=================== 17-03-02 13:15:39.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle=================== 17-03-02 13:15:39.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:15:39.060 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:15:39.060 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:15:39.060 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:39.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:39.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)=================== 17-03-02 13:15:39.101 -08 000000018 INF: Valve A1: Go to position 4 17-03-02 13:15:39.101 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:15:39.109 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44. 17-03-02 13:15:39.109 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44 17-03-02 13:15:39.109 -08 000000115 INF: ===================Camera #0 Frame #44=================== 17-03-02 13:15:39.116 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44. 17-03-02 13:15:39.116 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44 17-03-02 13:15:39.116 -08 000000098 INF: ===================Camera #2 Frame #44=================== 17-03-02 13:15:39.152 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:39.163 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 7\r 17-03-02 13:15:39.163 -08 000000018 INF: Valve A1: 38.483 seconds since last move, > 10.000 seconds required between moves 17-03-02 13:15:39.163 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 7 to 4 17-03-02 13:15:39.163 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC4\r 17-03-02 13:15:39.163 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-03-02 13:15:39.163 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:15:39.280 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50. 17-03-02 13:15:39.280 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50 17-03-02 13:15:39.280 -08 000000115 INF: ===================Camera #0 Frame #50=================== 17-03-02 13:15:39.286 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50. 17-03-02 13:15:39.286 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50 17-03-02 13:15:39.286 -08 000000098 INF: ===================Camera #2 Frame #50=================== 17-03-02 13:15:39.291 -08 000000030 INF: Y Motor: Unshifted Position: 5072059 17-03-02 13:15:39.341 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:39.449 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56. 17-03-02 13:15:39.449 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56 17-03-02 13:15:39.449 -08 000000115 INF: ===================Camera #0 Frame #56=================== 17-03-02 13:15:39.459 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57. 17-03-02 13:15:39.459 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57 17-03-02 13:15:39.459 -08 000000098 INF: ===================Camera #2 Frame #57=================== 17-03-02 13:15:39.463 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:39.600 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 4\r 17-03-02 13:15:39.600 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:15:39.600 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 17-03-02 13:15:39.601 -08 000000030 INF: Y Motor: Unshifted Position: 4868611 17-03-02 13:15:39.617 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62. 17-03-02 13:15:39.617 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62 17-03-02 13:15:39.617 -08 000000115 INF: ===================Camera #0 Frame #62=================== 17-03-02 13:15:39.635 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63. 17-03-02 13:15:39.635 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63 17-03-02 13:15:39.635 -08 000000098 INF: ===================Camera #2 Frame #63=================== 17-03-02 13:15:39.651 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:39.775 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:39.785 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69. 17-03-02 13:15:39.785 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69 17-03-02 13:15:39.785 -08 000000115 INF: ===================Camera #0 Frame #69=================== 17-03-02 13:15:39.808 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70. 17-03-02 13:15:39.808 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70 17-03-02 13:15:39.808 -08 000000098 INF: ===================Camera #2 Frame #70=================== 17-03-02 13:15:39.913 -08 000000030 INF: Y Motor: Unshifted Position: 4666893 17-03-02 13:15:39.956 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75. 17-03-02 13:15:39.956 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75 17-03-02 13:15:39.956 -08 000000115 INF: ===================Camera #0 Frame #75=================== 17-03-02 13:15:39.963 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:39.980 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76. 17-03-02 13:15:39.980 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76 17-03-02 13:15:39.980 -08 000000098 INF: ===================Camera #2 Frame #76=================== 17-03-02 13:15:40.089 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:40.124 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81. 17-03-02 13:15:40.124 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81 17-03-02 13:15:40.124 -08 000000115 INF: ===================Camera #0 Frame #81=================== 17-03-02 13:15:40.150 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82. 17-03-02 13:15:40.150 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82 17-03-02 13:15:40.150 -08 000000098 INF: ===================Camera #2 Frame #82=================== 17-03-02 13:15:40.224 -08 000000030 INF: Y Motor: Unshifted Position: 4464515 17-03-02 13:15:40.274 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:40.282 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:15:40.282 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:40.282 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:40.293 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87. 17-03-02 13:15:40.293 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87 17-03-02 13:15:40.293 -08 000000115 INF: ===================Camera #0 Frame #87=================== 17-03-02 13:15:40.320 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88. 17-03-02 13:15:40.320 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88 17-03-02 13:15:40.320 -08 000000098 INF: ===================Camera #2 Frame #88=================== 17-03-02 13:15:40.349 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:40.357 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000 17-03-02 13:15:40.402 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:40.449 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:15:40.462 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94. 17-03-02 13:15:40.462 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94 17-03-02 13:15:40.462 -08 000000115 INF: ===================Camera #0 Frame #94=================== 17-03-02 13:15:40.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-03-02 13:15:40.475 -08 000000018 INF: Current Position of Pump is: 0 17-03-02 13:15:40.489 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95. 17-03-02 13:15:40.489 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95 17-03-02 13:15:40.489 -08 000000098 INF: ===================Camera #2 Frame #95=================== 17-03-02 13:15:40.538 -08 000000030 INF: Y Motor: Unshifted Position: 4260416 17-03-02 13:15:40.575 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-03-02 13:15:40.588 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:40.633 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100. 17-03-02 13:15:40.633 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100 17-03-02 13:15:40.633 -08 000000115 INF: ===================Camera #0 Frame #100=================== 17-03-02 13:15:40.660 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:40.661 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101. 17-03-02 13:15:40.661 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101 17-03-02 13:15:40.661 -08 000000098 INF: ===================Camera #2 Frame #101=================== 17-03-02 13:15:40.711 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:40.760 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:40.801 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106. 17-03-02 13:15:40.801 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106 17-03-02 13:15:40.801 -08 000000115 INF: ===================Camera #0 Frame #106=================== 17-03-02 13:15:40.830 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107. 17-03-02 13:15:40.830 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107 17-03-02 13:15:40.830 -08 000000098 INF: ===================Camera #2 Frame #107=================== 17-03-02 13:15:40.848 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:40.849 -08 000000030 INF: Y Motor: Unshifted Position: 4058040 17-03-02 13:15:40.899 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:40.969 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112. 17-03-02 13:15:40.969 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112 17-03-02 13:15:40.969 -08 000000115 INF: ===================Camera #0 Frame #112=================== 17-03-02 13:15:40.999 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113. 17-03-02 13:15:40.999 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113 17-03-02 13:15:40.999 -08 000000098 INF: ===================Camera #2 Frame #113=================== 17-03-02 13:15:41.025 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:41.098 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:41.137 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118. 17-03-02 13:15:41.137 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118 17-03-02 13:15:41.137 -08 000000115 INF: ===================Camera #0 Frame #118=================== 17-03-02 13:15:41.159 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:41.160 -08 000000030 INF: Y Motor: Unshifted Position: 3855242 17-03-02 13:15:41.169 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120. 17-03-02 13:15:41.169 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120 17-03-02 13:15:41.169 -08 000000098 INF: ===================Camera #2 Frame #120=================== 17-03-02 13:15:41.210 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:41.259 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-03-02 13:15:41.305 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125. 17-03-02 13:15:41.305 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125 17-03-02 13:15:41.305 -08 000000115 INF: ===================Camera #0 Frame #125=================== 17-03-02 13:15:41.336 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:41.341 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126. 17-03-02 13:15:41.341 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126 17-03-02 13:15:41.341 -08 000000098 INF: ===================Camera #2 Frame #126=================== 17-03-02 13:15:41.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:41.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:41.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:41.474 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB=================== 17-03-02 13:15:41.475 -08 000000030 INF: Y Motor: Unshifted Position: 3651573 17-03-02 13:15:41.478 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131. 17-03-02 13:15:41.478 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131 17-03-02 13:15:41.478 -08 000000115 INF: ===================Camera #0 Frame #131=================== 17-03-02 13:15:41.511 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132. 17-03-02 13:15:41.511 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132 17-03-02 13:15:41.511 -08 000000098 INF: ===================Camera #2 Frame #132=================== 17-03-02 13:15:41.525 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:41.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP15360R\r 17-03-02 13:15:41.646 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137. 17-03-02 13:15:41.646 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137 17-03-02 13:15:41.646 -08 000000115 INF: ===================Camera #0 Frame #137=================== 17-03-02 13:15:41.650 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:41.661 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:41.680 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138. 17-03-02 13:15:41.680 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138 17-03-02 13:15:41.680 -08 000000098 INF: ===================Camera #2 Frame #138=================== 17-03-02 13:15:41.761 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:41.786 -08 000000030 INF: Y Motor: Unshifted Position: 3449207 17-03-02 13:15:41.814 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-03-02 13:15:41.814 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-03-02 13:15:41.814 -08 000000115 INF: ===================Camera #0 Frame #143=================== 17-03-02 13:15:41.836 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:41.849 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:41.849 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145. 17-03-02 13:15:41.849 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145 17-03-02 13:15:41.849 -08 000000098 INF: ===================Camera #2 Frame #145=================== 17-03-02 13:15:41.943 -08 000000060 INF: RunCopyService queue size at 3/2/2017 1:15:41 PM is 0 17-03-02 13:15:41.961 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:41.982 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150. 17-03-02 13:15:41.982 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150 17-03-02 13:15:41.982 -08 000000115 INF: ===================Camera #0 Frame #150=================== 17-03-02 13:15:42.130 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:42.130 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:15:42.130 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:15:42.131 -08 000000098 INF: ===================Camera #2 Frame #155=================== 17-03-02 13:15:42.190 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:42.191 -08 000000030 INF: Y Motor: Unshifted Position: 3184005 17-03-02 13:15:42.241 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:42.303 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-03-02 13:15:42.303 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-03-02 13:15:42.303 -08 000000115 INF: ===================Camera #0 Frame #161=================== 17-03-02 13:15:42.312 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-03-02 13:15:42.312 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-03-02 13:15:42.312 -08 000000098 INF: ===================Camera #2 Frame #162=================== 17-03-02 13:15:42.368 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:42.440 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:42.486 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:15:42.486 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:15:42.486 -08 000000098 INF: ===================Camera #2 Frame #168=================== 17-03-02 13:15:42.488 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:15:42.488 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:15:42.488 -08 000000115 INF: ===================Camera #0 Frame #168=================== 17-03-02 13:15:42.505 -08 000000030 INF: Y Motor: Unshifted Position: 2982952 17-03-02 13:15:42.506 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:42.555 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:42.657 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:15:42.657 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:15:42.657 -08 000000098 INF: ===================Camera #2 Frame #174=================== 17-03-02 13:15:42.661 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175. 17-03-02 13:15:42.661 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175 17-03-02 13:15:42.661 -08 000000115 INF: ===================Camera #0 Frame #175=================== 17-03-02 13:15:42.679 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:42.756 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:42.815 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:42.817 -08 000000030 INF: Y Motor: Unshifted Position: 2779282 17-03-02 13:15:42.828 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-03-02 13:15:42.828 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-03-02 13:15:42.828 -08 000000098 INF: ===================Camera #2 Frame #181=================== 17-03-02 13:15:42.834 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-03-02 13:15:42.834 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-03-02 13:15:42.834 -08 000000115 INF: ===================Camera #0 Frame #181=================== 17-03-02 13:15:42.867 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:42.992 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:43.003 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:15:43.003 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:15:43.003 -08 000000098 INF: ===================Camera #2 Frame #187=================== 17-03-02 13:15:43.004 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:15:43.004 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:15:43.004 -08 000000115 INF: ===================Camera #0 Frame #187=================== 17-03-02 13:15:43.065 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:43.128 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:43.129 -08 000000030 INF: Y Motor: Unshifted Position: 2576473 17-03-02 13:15:43.174 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:15:43.174 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:15:43.174 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:15:43.174 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:15:43.174 -08 000000098 INF: ===================Camera #2 Frame #193=================== 17-03-02 13:15:43.174 -08 000000115 INF: ===================Camera #0 Frame #193=================== 17-03-02 13:15:43.179 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:43.303 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:43.344 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-03-02 13:15:43.344 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-03-02 13:15:43.344 -08 000000115 INF: ===================Camera #0 Frame #200=================== 17-03-02 13:15:43.345 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-03-02 13:15:43.345 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-03-02 13:15:43.345 -08 000000098 INF: ===================Camera #2 Frame #200=================== 17-03-02 13:15:43.378 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:43.439 -08 000000030 INF: Y Motor: Unshifted Position: 2374327 17-03-02 13:15:43.440 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:43.489 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:43.518 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-03-02 13:15:43.518 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-03-02 13:15:43.518 -08 000000115 INF: ===================Camera #0 Frame #206=================== 17-03-02 13:15:43.519 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-03-02 13:15:43.519 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-03-02 13:15:43.519 -08 000000098 INF: ===================Camera #2 Frame #206=================== 17-03-02 13:15:43.615 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:43.688 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-03-02 13:15:43.688 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-03-02 13:15:43.688 -08 000000115 INF: ===================Camera #0 Frame #212=================== 17-03-02 13:15:43.690 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:43.690 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-03-02 13:15:43.690 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-03-02 13:15:43.690 -08 000000098 INF: ===================Camera #2 Frame #212=================== 17-03-02 13:15:43.752 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:43.753 -08 000000030 INF: Y Motor: Unshifted Position: 2171314 17-03-02 13:15:43.803 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:43.858 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-03-02 13:15:43.858 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-03-02 13:15:43.858 -08 000000115 INF: ===================Camera #0 Frame #219=================== 17-03-02 13:15:43.861 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-03-02 13:15:43.861 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-03-02 13:15:43.861 -08 000000098 INF: ===================Camera #2 Frame #219=================== 17-03-02 13:15:43.926 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:44.002 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:44.032 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-03-02 13:15:44.032 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-03-02 13:15:44.032 -08 000000115 INF: ===================Camera #0 Frame #225=================== 17-03-02 13:15:44.035 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-03-02 13:15:44.035 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-03-02 13:15:44.035 -08 000000098 INF: ===================Camera #2 Frame #225=================== 17-03-02 13:15:44.063 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:44.064 -08 000000030 INF: Y Motor: Unshifted Position: 1967866 17-03-02 13:15:44.114 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:44.202 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-03-02 13:15:44.202 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-03-02 13:15:44.202 -08 000000115 INF: ===================Camera #0 Frame #231=================== 17-03-02 13:15:44.206 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-03-02 13:15:44.206 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-03-02 13:15:44.206 -08 000000098 INF: ===================Camera #2 Frame #231=================== 17-03-02 13:15:44.237 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:44.313 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:44.372 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-03-02 13:15:44.372 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-03-02 13:15:44.372 -08 000000115 INF: ===================Camera #0 Frame #238=================== 17-03-02 13:15:44.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:44.376 -08 000000030 INF: Y Motor: Unshifted Position: 1764854 17-03-02 13:15:44.377 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-03-02 13:15:44.377 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-03-02 13:15:44.377 -08 000000098 INF: ===================Camera #2 Frame #238=================== 17-03-02 13:15:44.426 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:44.543 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-03-02 13:15:44.543 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-03-02 13:15:44.543 -08 000000115 INF: ===================Camera #0 Frame #244=================== 17-03-02 13:15:44.549 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:44.550 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-03-02 13:15:44.550 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-03-02 13:15:44.550 -08 000000098 INF: ===================Camera #2 Frame #244=================== 17-03-02 13:15:44.625 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:44.687 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:44.688 -08 000000030 INF: Y Motor: Unshifted Position: 1563360 17-03-02 13:15:44.711 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-03-02 13:15:44.711 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-03-02 13:15:44.711 -08 000000115 INF: ===================Camera #0 Frame #250=================== 17-03-02 13:15:44.720 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-03-02 13:15:44.720 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-03-02 13:15:44.720 -08 000000098 INF: ===================Camera #2 Frame #250=================== 17-03-02 13:15:44.738 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:44.862 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:44.879 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256. 17-03-02 13:15:44.879 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256 17-03-02 13:15:44.879 -08 000000115 INF: ===================Camera #0 Frame #256=================== 17-03-02 13:15:44.890 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-03-02 13:15:44.890 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-03-02 13:15:44.890 -08 000000098 INF: ===================Camera #2 Frame #257=================== 17-03-02 13:15:44.937 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:44.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:45.000 -08 000000030 INF: Y Motor: Unshifted Position: 1360552 17-03-02 13:15:45.048 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262. 17-03-02 13:15:45.048 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262 17-03-02 13:15:45.048 -08 000000115 INF: ===================Camera #0 Frame #262=================== 17-03-02 13:15:45.050 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:45.064 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-03-02 13:15:45.064 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-03-02 13:15:45.064 -08 000000098 INF: ===================Camera #2 Frame #263=================== 17-03-02 13:15:45.173 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:45.217 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-03-02 13:15:45.217 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-03-02 13:15:45.217 -08 000000115 INF: ===================Camera #0 Frame #269=================== 17-03-02 13:15:45.235 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-03-02 13:15:45.235 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-03-02 13:15:45.235 -08 000000098 INF: ===================Camera #2 Frame #269=================== 17-03-02 13:15:45.249 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:45.312 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:45.312 -08 000000025 INF: FPGA: Recv TDIYWAIT 17-03-02 13:15:45.312 -08 000000071 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:45.313 -08 000000030 INF: Y Motor: Unshifted Position: 1157539 17-03-02 13:15:45.314 -08 000000071 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:15:45.315 -08 000000102 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:15:45.315 -08 000000112 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:15:45.315 -08 000000102 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:15:45.315 -08 000000102 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:15:45.315 -08 000000102 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:15:45.315 -08 000000112 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:15:45.315 -08 000000102 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:15:45.315 -08 000000112 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:15:45.315 -08 000000112 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:15:45.316 -08 000000112 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:15:45.363 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:45.390 -08 000000115 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:15:45.390 -08 000000115 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:15:45.390 -08 000000115 INF: ===================Camera #0 Frame #272=================== 17-03-02 13:15:45.400 -08 000000115 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:15:45.401 -08 000000115 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:45.487 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:45.531 -08 000000115 INF: Camera #0 ReleaseBuffer 17-03-02 13:15:45.531 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:15:45.531 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:15:45.531 -08 000000098 INF: ===================Camera #2 Frame #272=================== 17-03-02 13:15:45.531 -08 000000115 INF: ===================Camera TDI=================== 17-03-02 13:15:45.540 -08 000000098 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:15:45.541 -08 000000098 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:45.560 -08 000000115 INF: ====================================== 17-03-02 13:15:45.562 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:45.624 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:45.625 -08 000000030 INF: Y Motor: Unshifted Position: 992412 17-03-02 13:15:45.675 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:45.685 -08 000000066 INF: FPGA: Recv EX2MV 17-03-02 13:15:45.685 -08 000000066 INF: FPGA: Recv EX1MV 17-03-02 13:15:45.685 -08 000000112 INF: Excitation Filter 1: Moved 107 steps in 369.9378 ms 17-03-02 13:15:45.685 -08 000000102 INF: Excitation Filter 2: Moved 107 steps in 370.1278 ms 17-03-02 13:15:45.685 -08 000000102 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.2316 ms 17-03-02 13:15:45.685 -08 000000102 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.3084 ms 17-03-02 13:15:45.685 -08 000000112 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.075 ms 17-03-02 13:15:45.685 -08 000000112 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.4567 ms 17-03-02 13:15:45.686 -08 000000102 INF: ====================================== 17-03-02 13:15:45.686 -08 000000112 INF: ====================================== 17-03-02 13:15:45.687 -08 000000071 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:45.688 -08 000000071 INF: ====================================== 17-03-02 13:15:45.714 -08 000000098 INF: Camera #2 ReleaseBuffer 17-03-02 13:15:45.714 -08 000000098 INF: ===================Camera TDI=================== 17-03-02 13:15:45.749 -08 000000098 INF: ====================================== 17-03-02 13:15:45.750 -08 000000031 INF: ===================Camera TDI=================== 17-03-02 13:15:45.751 -08 000000031 INF: ====================================== 17-03-02 13:15:45.811 -08 000000030 INF: Y Motor: Unshifted Position: 992405 17-03-02 13:15:45.811 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:45.811 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:45.873 -08 000000030 INF: Y Motor: Recv v 0\r 17-03-02 13:15:45.873 -08 000000030 INF: Y Motor: Moved to 14.9241 after 7970 ms 17-03-02 13:15:45.873 -08 000000030 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:45.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:45.934 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:45.935 -08 000000030 INF: Y Motor: Recv v 4097\r 17-03-02 13:15:45.935 -08 000000030 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:45.935 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:45.997 -08 000000030 INF: Y Motor: Recv v 0\r 17-03-02 13:15:45.997 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:45.997 -08 000000030 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:46.059 -08 000000030 INF: Y Motor: Recv v 134217728\r 17-03-02 13:15:46.059 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:15:46.059 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:46.059 -08 000000030 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:46.125 -08 000000030 INF: Y Motor: Recv v 0\r 17-03-02 13:15:46.125 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:46.125 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:46.125 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:46.184 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:46.185 -08 000000030 INF: Y Motor: Recv ok\r 17-03-02 13:15:46.185 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:46.185 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:46.246 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:46.247 -08 000000030 INF: Y Motor: Recv ok\r 17-03-02 13:15:46.247 -08 000000030 INF: ====================================== 17-03-02 13:15:46.248 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:46.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:46.250 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.250 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:15:46.309 -08 000000088 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:15:46.309 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:46.371 -08 000000057 INF: FPGA: Recv TDIYERD 1492407 17-03-02 13:15:46.371 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:15:46.432 -08 000000085 INF: FPGA: Recv ZADCR 34889 17-03-02 13:15:46.432 -08 000000042 INF: At scan end Y pos = 14.924 and Z pos = -0.133. Y moved -48.539 mm 17-03-02 13:15:46.432 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:15:46.494 -08 000000078 INF: FPGA: Recv TDIPULSES 139265 17-03-02 13:15:46.494 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-03-02 13:15:46.494 -08 000000042 INF: TDIScan finished after 12822.2518 ms 17-03-02 13:15:46.494 -08 000000042 INF: Image[0]: Y should trigger at 63.463 mm, 2nd row was at 64.372 mm (error = 0.909 mm) 17-03-02 13:15:46.494 -08 000000042 INF: Image[2]: Y should trigger at 63.463 mm, 2nd row was at 64.372 mm (error = 0.909 mm) 17-03-02 13:15:46.496 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:46.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.535 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.692 um 17-03-02 13:15:46.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.536 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:15:46.559 -08 000000082 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:15:46.560 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:46.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.560 -08 000000030 INF: ===================Dither Clean Up Command=================== 17-03-02 13:15:46.561 -08 000000070 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:15:46.561 -08 000000115 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:15:46.561 -08 000000105 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:15:46.561 -08 000000070 INF: ====================================== 17-03-02 13:15:46.561 -08 000000105 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:15:46.561 -08 000000105 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:15:46.561 -08 000000115 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:15:46.561 -08 000000115 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:15:46.561 -08 000000009 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:15:46.561 -08 000000099 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:46.562 -08 000000009 INF: FPGA: Xmit ZSEL 0\n 17-03-02 13:15:46.565 -08 000000099 INF: ===================LFT:Extracting coords=================== 17-03-02 13:15:46.590 -08 000000099 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:46.591 -08 000000099 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-03-02 13:15:46.592 -08 000000094 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:46.592 -08 000000087 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:46.592 -08 000000111 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:46.592 -08 000000068 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:46.592 -08 000000094 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:46.592 -08 000000087 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:46.592 -08 000000068 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:46.592 -08 000000111 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:15:46.620 -08 000000104 INF: FPGA: Recv ZSTEP 17-03-02 13:15:46.620 -08 000000104 INF: FPGA: Recv ZSEL 17-03-02 13:15:46.620 -08 000000009 INF: FPGA: Xmit ZDACW 40055\n 17-03-02 13:15:46.620 -08 000000105 INF: ====================================== 17-03-02 13:15:46.622 -08 000000115 INF: Y Motor: Recv ok\r 17-03-02 13:15:46.622 -08 000000115 INF: ====================================== 17-03-02 13:15:46.666 -08 000000087 INF: FC:B, C:162,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:46.666 -08 000000068 INF: FC:B, C:162,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:46.666 -08 000000111 INF: FC:B, C:162,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:46.666 -08 000000094 INF: FC:B, C:162,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:15:46.682 -08 000000053 INF: FPGA: Recv ZDACW 17-03-02 13:15:46.683 -08 000000009 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-03-02 13:15:46.683 -08 000000009 INF: FPGA: Xmit TDIBB 0\n 17-03-02 13:15:46.744 -08 000000052 INF: FPGA: Recv TDIBB 17-03-02 13:15:46.744 -08 000000009 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:15:46.745 -08 000000009 INF: ====================================== 17-03-02 13:15:46.810 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:46.818 -08 000000087 INF: LFT found best fwhm score 2.000088 in 152 ms 17-03-02 13:15:46.818 -08 000000087 INF: LFT found good score at index 7629 with fwhm value 2.000088. Next cycle, cycle 163 starting Z position for top surface is at -0.156 mm FC:B, C:162,L:2,T 17-03-02 13:15:46.818 -08 000000068 INF: LFT found best fwhm score 2.256753 in 152 ms 17-03-02 13:15:46.818 -08 000000111 INF: LFT found best fwhm score 2.000767 in 152 ms 17-03-02 13:15:46.818 -08 000000111 INF: LFT found good score at index 3553 with fwhm value 2.000767. Next cycle, cycle 163 starting Z position for top surface is at -0.157 mm FC:B, C:162,L:2,T 17-03-02 13:15:46.818 -08 000000087 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:46.818 -08 000000111 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:46.818 -08 000000068 INF: LFT found good score at index 4281 with fwhm value 2.256753. Next cycle, cycle 163 starting Z position for top surface is at -0.157 mm FC:B, C:162,L:2,T 17-03-02 13:15:46.818 -08 000000087 INF: ====================================== 17-03-02 13:15:46.818 -08 000000094 INF: LFT found best fwhm score 2.017666 in 151 ms 17-03-02 13:15:46.818 -08 000000094 INF: LFT found good score at index 4281 with fwhm value 2.017666. Next cycle, cycle 163 starting Z position for top surface is at -0.157 mm FC:B, C:162,L:2,T 17-03-02 13:15:46.818 -08 000000068 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:46.818 -08 000000111 INF: ====================================== 17-03-02 13:15:46.819 -08 000000094 INF: ===================LookupFocusTracking=================== 17-03-02 13:15:46.819 -08 000000068 INF: ====================================== 17-03-02 13:15:46.819 -08 000000094 INF: ====================================== 17-03-02 13:15:46.820 -08 000000099 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:15:46.821 -08 000000099 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:162,L:2,T 17-03-02 13:15:46.821 -08 000000099 INF: ====================================== 17-03-02 13:15:46.823 -08 000000030 INF: ====================================== 17-03-02 13:15:46.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:15:46.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:15:46.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:15:46.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:15:46.826 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:46.826 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-03-02 13:15:46.826 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-03-02 13:15:46.828 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB, Waiting for image analysis=================== 17-03-02 13:15:46.828 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB=================== 17-03-02 13:15:46.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Waiting for image analysis=================== 17-03-02 13:15:46.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-03-02 13:15:46.853 -08 000000042 INF: Waited 26 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-03-02 13:15:46.853 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:46.853 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:46.853 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:46.854 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-03-02 13:15:46.854 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 2=================== 17-03-02 13:15:46.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface=================== 17-03-02 13:15:46.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:46.874 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:46.874 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:15:46.874 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:15:46.938 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:46.940 -08 000000131 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1203 Request: {"Cycle":162,"Lane":2,"Tile":1203,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF250","HCSMMF194","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:46.991 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:15:46.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:46.992 -08 000000042 INF: Compensator: Moving OutOfPath 17-03-02 13:15:46.992 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n 17-03-02 13:15:47.194 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1204 Request: {"Cycle":162,"Lane":2,"Tile":1204,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF287","HCSMMF177","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.212 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1201 Request: {"Cycle":162,"Lane":2,"Tile":1201,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF199","HCSMMF244","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.212 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:47.213 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1207 Request: {"Cycle":162,"Lane":2,"Tile":1207,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF279","HCSMMF217","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.214 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1202 Request: {"Cycle":162,"Lane":2,"Tile":1202,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF232","HCSMMF256","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.215 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1209 Request: {"Cycle":162,"Lane":2,"Tile":1209,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF269","HCSMMF276","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.216 -08 000000126 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1227 Request: {"Cycle":162,"Lane":2,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF283","HCSMMF271","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.216 -08 000000116 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1214 Request: {"Cycle":162,"Lane":2,"Tile":1214,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF192","HCSMMF240","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.217 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1210 Request: {"Cycle":162,"Lane":2,"Tile":1210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF281","HCSMMF207","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.218 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1217 Request: {"Cycle":162,"Lane":2,"Tile":1217,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF218","HCSMMF285","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.219 -08 000000115 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1213 Request: {"Cycle":162,"Lane":2,"Tile":1213,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF179","HCSMMF234","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.219 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1218 Request: {"Cycle":162,"Lane":2,"Tile":1218,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF266","HCSMMF261","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.220 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1221 Request: {"Cycle":162,"Lane":2,"Tile":1221,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF197","HCSMMF196","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.221 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1216 Request: {"Cycle":162,"Lane":2,"Tile":1216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF195","HCSMMF263","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.222 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1224 Request: {"Cycle":162,"Lane":2,"Tile":1224,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF243","HCSMMF181","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.222 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1220 Request: {"Cycle":162,"Lane":2,"Tile":1220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF226","HCSMMF277","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.223 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1211 Request: {"Cycle":162,"Lane":2,"Tile":1211,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF255","HCSMMF202","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.224 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1219 Request: {"Cycle":162,"Lane":2,"Tile":1219,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF198","HCSMMF191","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.225 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1208 Request: {"Cycle":162,"Lane":2,"Tile":1208,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF222","HCSMMF182","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.226 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1206 Request: {"Cycle":162,"Lane":2,"Tile":1206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF220","HCSMMF235","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.226 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1222 Request: {"Cycle":162,"Lane":2,"Tile":1222,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF252","HCSMMF257","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.227 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1215 Request: {"Cycle":162,"Lane":2,"Tile":1215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF186","HCSMMF241","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.228 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1225 Request: {"Cycle":162,"Lane":2,"Tile":1225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF239","HCSMMF201","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.229 -08 000000112 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1212 Request: {"Cycle":162,"Lane":2,"Tile":1212,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF242","HCSMMF208","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.230 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1205 Request: {"Cycle":162,"Lane":2,"Tile":1205,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF237","HCSMMF185","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.232 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1226 Request: {"Cycle":162,"Lane":2,"Tile":1226,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF258","HCSMMF225","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.233 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1228 Request: {"Cycle":162,"Lane":2,"Tile":1228,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF268","HCSMMF229","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.235 -08 000000117 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 162 Tile: 1223 Request: {"Cycle":162,"Lane":2,"Tile":1223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF193","HCSMMF213","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:15:47.244 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:47.250 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-03-02 13:15:47.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:47.364 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:47.364 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-03-02 13:15:47.383 -08 000000132 INF: FPGA: Recv MIOCOMPR 17-03-02 13:15:47.383 -08 000000042 INF: Compensator: Moved OutOfPath in 391 ms 17-03-02 13:15:47.383 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543 17-03-02 13:15:47.384 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:47.385 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:47.386 -08 000000102 INF: ===================Move Tilt Motor 1=================== 17-03-02 13:15:47.386 -08 000000028 INF: ===================Move Tilt Motor 2=================== 17-03-02 13:15:47.386 -08 000000126 INF: ===================Move Tilt Motor 3=================== 17-03-02 13:15:47.386 -08 000000102 INF: ====================================== 17-03-02 13:15:47.386 -08 000000028 INF: ====================================== 17-03-02 13:15:47.386 -08 000000126 INF: ====================================== 17-03-02 13:15:47.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:47.388 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:47.394 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm. 17-03-02 13:15:47.401 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:47.405 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm. 17-03-02 13:15:47.405 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-03-02 13:15:47.405 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-03-02 13:15:47.406 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:47.406 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-03-02 13:15:47.407 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:47.410 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0 17-03-02 13:15:47.410 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format 17-03-02 13:15:47.410 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n 17-03-02 13:15:47.448 -08 000000045 INF: FPGA: Recv ZSTEP 17-03-02 13:15:47.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:47.449 -08 000000042 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:15:47.449 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1528 mm 17-03-02 13:15:47.449 -08 000000042 INF: FPGA: Xmit ZTRG 0\n 17-03-02 13:15:47.492 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:47.498 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-03-02 13:15:47.509 -08 000000075 INF: FPGA: Recv ZTRG 17-03-02 13:15:47.509 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n 17-03-02 13:15:47.525 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:47.571 -08 000000132 INF: FPGA: Recv ZYT 17-03-02 13:15:47.571 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-03-02 13:15:47.571 -08 000000042 INF: FPGA: Xmit ZMV 60292\n 17-03-02 13:15:47.585 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:47.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:47.591 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-03-02 13:15:47.633 -08 000000045 INF: FPGA: Recv @LOG Trigger Camera 17-03-02 13:15:47.633 -08 000000045 INF: FPGA: Recv ZMV 17-03-02 13:15:47.633 -08 000000006 INF: FPGA: Trigger Camera 17-03-02 13:15:47.633 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.21 ms 17-03-02 13:15:47.633 -08 000000042 INF: FPGA: Xmit ZDACR\n 17-03-02 13:15:47.669 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:15:47.697 -08 000000096 INF: FPGA: Recv ZDACR 60292 17-03-02 13:15:47.697 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.3082 ms w/comms 17-03-02 13:15:47.697 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:47.697 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.48 ms 17-03-02 13:15:47.697 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:47.698 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm. 17-03-02 13:15:47.706 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-03-02 13:15:47.706 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:15:47.706 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:15:47.706 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format 17-03-02 13:15:47.706 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n 17-03-02 13:15:47.759 -08 000000131 INF: FPGA: Recv ZSTEP 17-03-02 13:15:47.769 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:47.770 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm. 17-03-02 13:15:47.778 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-03-02 13:15:47.778 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:15:47.778 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:15:47.781 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:47.781 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:15:47.781 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:47.781 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1 17-03-02 13:15:47.781 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:47.782 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:47.783 -08 000000074 INF: ===================Move X,Y=================== 17-03-02 13:15:47.783 -08 000000088 INF: ===================MoveEmissionFilters=================== 17-03-02 13:15:47.783 -08 000000074 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:15:47.784 -08 000000116 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:47.784 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:47.784 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:47.784 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:47.784 -08 000000052 INF: ===================Move X Motor without settling=================== 17-03-02 13:15:47.784 -08 000000075 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:47.785 -08 000000052 INF: X Motor: Xmit PR VM\n 17-03-02 13:15:47.785 -08 000000116 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:47.785 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:47.785 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:47.785 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:47.785 -08 000000075 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9241 mm 17-03-02 13:15:47.785 -08 000000075 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:47.785 -08 000000075 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:47.786 -08 000000070 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:15:47.786 -08 000000095 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:15:47.786 -08 000000044 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:15:47.786 -08 000000126 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:15:47.786 -08 000000030 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:15:47.786 -08 000000095 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:15:47.786 -08 000000109 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:15:47.786 -08 000000119 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:15:47.786 -08 000000056 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:15:47.786 -08 000000070 INF: ====================================== 17-03-02 13:15:47.786 -08 000000044 INF: ====================================== 17-03-02 13:15:47.787 -08 000000119 INF: ====================================== 17-03-02 13:15:47.787 -08 000000056 INF: ====================================== 17-03-02 13:15:47.787 -08 000000126 INF: ====================================== 17-03-02 13:15:47.787 -08 000000109 INF: ====================================== 17-03-02 13:15:47.789 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:47.789 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:47.789 -08 000000030 INF: ====================================== 17-03-02 13:15:47.789 -08 000000095 INF: ====================================== 17-03-02 13:15:47.790 -08 000000086 INF: ====================================== 17-03-02 13:15:47.790 -08 000000073 INF: ====================================== 17-03-02 13:15:47.790 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:47.791 -08 000000116 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:47.792 -08 000000050 INF: ====================================== 17-03-02 13:15:47.792 -08 000000116 INF: ====================================== 17-03-02 13:15:47.793 -08 000000088 INF: ====================================== 17-03-02 13:15:47.826 -08 000000075 INF: Y Motor: Recv ok\r 17-03-02 13:15:47.826 -08 000000075 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:47.826 -08 000000075 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:47.837 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:47.840 -08 000000052 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:15:47.840 -08 000000052 INF: X Motor: Xmit PR VI\n 17-03-02 13:15:47.886 -08 000000075 INF: Y Motor: Recv ok\r 17-03-02 13:15:47.886 -08 000000075 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:47.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:47.901 -08 000000052 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:15:47.901 -08 000000052 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:15:47.901 -08 000000052 INF: X Motor: Moving to 74.7156 mm @15.000 mm/sec, started at 72.4766 mm 17-03-02 13:15:47.901 -08 000000052 INF: X Motor: Xmit MA 6437\n 17-03-02 13:15:47.949 -08 000000075 INF: Y Motor: Recv v 0\r 17-03-02 13:15:47.949 -08 000000075 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:47.949 -08 000000075 INF: Y Motor: Set target position to 5953351 encoder counts 17-03-02 13:15:47.949 -08 000000075 INF: Y Motor: Xmit s r0xca 5953351\r 17-03-02 13:15:47.950 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-03-02 13:15:47.962 -08 000000052 INF: X Motor: Recv MA 6437\r\n> 17-03-02 13:15:47.962 -08 000000052 INF: X Motor: WaitUntilStopped 60149 17-03-02 13:15:48.011 -08 000000075 INF: Y Motor: Recv ok\r 17-03-02 13:15:48.011 -08 000000075 INF: Y Motor: Start the move command 17-03-02 13:15:48.011 -08 000000075 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:48.074 -08 000000075 INF: Y Motor: Recv ok\r 17-03-02 13:15:48.074 -08 000000075 INF: Y Motor: WaitUntilStopped 61984 17-03-02 13:15:48.074 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:48.150 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:48.196 -08 000000075 INF: Y Motor: Unshifted Position: 1072681 17-03-02 13:15:48.213 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:48.246 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:48.341 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:48.463 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:48.478 -08 000000075 INF: Y Motor: Unshifted Position: 1701580 17-03-02 13:15:48.528 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:48.539 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:48.654 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:48.666 -08 000000052 INF: X Motor: Xmit PR ER\n 17-03-02 13:15:48.727 -08 000000052 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:15:48.727 -08 000000052 INF: X Motor: Moved to 74.7153 after 765 ms 17-03-02 13:15:48.727 -08 000000052 INF: ====================================== 17-03-02 13:15:48.789 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:48.789 -08 000000075 INF: Y Motor: Unshifted Position: 2479860 17-03-02 13:15:48.839 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:48.853 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:48.965 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:49.102 -08 000000075 INF: Y Motor: Unshifted Position: 3262441 17-03-02 13:15:49.103 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:49.152 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:49.163 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:49.278 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:49.413 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:49.413 -08 000000075 INF: Y Motor: Unshifted Position: 4040729 17-03-02 13:15:49.463 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:49.476 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:49.588 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:49.725 -08 000000075 INF: Y Motor: Unshifted Position: 4820734 17-03-02 13:15:49.726 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:49.775 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:49.789 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:49.901 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:50.037 -08 000000075 INF: Y Motor: Unshifted Position: 5604075 17-03-02 13:15:50.039 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:50.087 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:50.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:50.213 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:50.350 -08 000000075 INF: Y Motor: Unshifted Position: 5953352 17-03-02 13:15:50.351 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:50.400 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:50.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:50.537 -08 000000075 INF: Y Motor: Unshifted Position: 5953352 17-03-02 13:15:50.537 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:50.537 -08 000000075 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:50.601 -08 000000075 INF: Y Motor: Recv v 0\r 17-03-02 13:15:50.601 -08 000000075 INF: Y Motor: Moved to 64.5335 after 2527 ms 17-03-02 13:15:50.601 -08 000000075 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:50.661 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:50.663 -08 000000075 INF: Y Motor: Recv v 4096\r 17-03-02 13:15:50.663 -08 000000075 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:50.663 -08 000000075 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:50.724 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:50.725 -08 000000075 INF: Y Motor: Recv v 0\r 17-03-02 13:15:50.725 -08 000000075 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:50.725 -08 000000075 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:50.786 -08 000000075 INF: Y Motor: Recv v 402653184\r 17-03-02 13:15:50.786 -08 000000075 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:15:50.786 -08 000000075 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:50.786 -08 000000075 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:50.848 -08 000000075 INF: Y Motor: Recv v 0\r 17-03-02 13:15:50.848 -08 000000075 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:50.848 -08 000000075 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:50.848 -08 000000075 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:50.911 -08 000000075 INF: Y Motor: Recv ok\r 17-03-02 13:15:50.911 -08 000000075 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:50.911 -08 000000075 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:50.974 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:50.975 -08 000000075 INF: Y Motor: Recv ok\r 17-03-02 13:15:50.975 -08 000000075 INF: ====================================== 17-03-02 13:15:50.976 -08 000000074 INF: ===================Move X,Y=================== 17-03-02 13:15:50.978 -08 000000074 INF: ====================================== 17-03-02 13:15:50.979 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:50.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:50.980 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec 17-03-02 13:15:50.980 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r 17-03-02 13:15:51.036 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:51.037 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:15:51.037 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n 17-03-02 13:15:51.081 -08 000000083 INF: FPGA: Recv ZFREQCL 17-03-02 13:15:51.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:15:51.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:51.082 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:51.143 -08 000000075 INF: FPGA: Recv TDIYERD 6453353 17-03-02 13:15:51.143 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm) 17-03-02 13:15:51.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:51.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:51.145 -08 000000105 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:15:51.145 -08 000000044 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:51.146 -08 000000105 INF: ====================================== 17-03-02 13:15:51.146 -08 000000044 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:15:51.147 -08 000000044 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:51.148 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:15:51.149 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:15:51.149 -08 000000044 INF: FPGA: Xmit TDIYPOS 6433351\n 17-03-02 13:15:51.207 -08 000000073 INF: FPGA: Recv TDIYPOS 17-03-02 13:15:51.207 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:15:51.209 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:15:51.209 -08 000000044 INF: FPGA: Xmit TDIYARM2 3072 1 1\n 17-03-02 13:15:51.270 -08 000000086 INF: FPGA: Recv TDIYARM2 17-03-02 13:15:51.270 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:15:51.272 -08 000000044 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:51.273 -08 000000044 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:15:51.273 -08 000000044 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:51.275 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-03-02 13:15:51.276 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:15:51.277 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:51.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:51.348 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:51.599 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:51.648 -08 000000044 INF: Camera #0 AttachBuffer (imageDataPtr = 69126516224 imgPtr = 69126516224 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-03-02 13:15:51.648 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072 17-03-02 13:15:51.648 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:51.662 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:51.663 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:15:51.665 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:51.912 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:51.972 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:52.078 -08 000000044 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821386880 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-03-02 13:15:52.078 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072 17-03-02 13:15:52.078 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:52.094 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:15:52.096 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-03-02 13:15:52.098 -08 000000044 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:52.100 -08 000000044 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:52.102 -08 000000044 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:15:52.102 -08 000000044 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:52.105 -08 000000044 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:15:52.105 -08 000000044 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:15:52.105 -08 000000044 INF: Z Motor: Arming to move to -0.0100 mm 17-03-02 13:15:52.105 -08 000000044 INF: FPGA: Xmit ZYT 0 2\n 17-03-02 13:15:52.142 -08 000000109 INF: FPGA: Recv ZYT 17-03-02 13:15:52.142 -08 000000044 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines) 17-03-02 13:15:52.142 -08 000000044 INF: FPGA: Xmit ZARM 2621\n 17-03-02 13:15:52.205 -08 000000030 INF: FPGA: Recv ZARM 17-03-02 13:15:52.205 -08 000000044 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.7544 ms 17-03-02 13:15:52.205 -08 000000044 INF: Z Motor: ArmAbsStepped took 99.9825 ms 17-03-02 13:15:52.205 -08 000000044 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:52.207 -08 000000044 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:52.208 -08 000000044 INF: ====================================== 17-03-02 13:15:52.209 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:52.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:52.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:52.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:52.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:52.214 -08 000000083 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:15:52.214 -08 000000083 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:15:52.214 -08 000000097 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:15:52.214 -08 000000083 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:15:52.214 -08 000000083 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:15:52.214 -08 000000083 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:15:52.214 -08 000000097 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:15:52.214 -08 000000097 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:15:52.214 -08 000000097 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:15:52.215 -08 000000097 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:15:52.222 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:52.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:15:52.286 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:52.286 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:52.287 -08 000000018 INF: WaitCommand(5000) start 17-03-02 13:15:52.287 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left=================== 17-03-02 13:15:52.642 -08 000000072 INF: FPGA: Recv EX2MV 17-03-02 13:15:52.642 -08 000000072 INF: FPGA: Recv EX1MV 17-03-02 13:15:52.642 -08 000000083 INF: Excitation Filter 2: Moved -107 steps in 427.983 ms 17-03-02 13:15:52.642 -08 000000083 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 428.2256 ms 17-03-02 13:15:52.642 -08 000000083 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 428.2997 ms 17-03-02 13:15:52.642 -08 000000097 INF: Excitation Filter 1: Moved -107 steps in 427.8332 ms 17-03-02 13:15:52.642 -08 000000097 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 428.242 ms 17-03-02 13:15:52.642 -08 000000097 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 428.3564 ms 17-03-02 13:15:52.643 -08 000000083 INF: ====================================== 17-03-02 13:15:52.643 -08 000000097 INF: ====================================== 17-03-02 13:15:52.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:52.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:52.646 -08 000000098 INF: ===================Serial=================== 17-03-02 13:15:52.646 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:52.646 -08 000000100 INF: ===================Camera TDI=================== 17-03-02 13:15:52.646 -08 000000094 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:52.646 -08 000000094 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm 17-03-02 13:15:52.647 -08 000000094 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:52.647 -08 000000094 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:52.647 -08 000000098 INF: ===================Serial, FPGA Z Wait=================== 17-03-02 13:15:52.647 -08 000000098 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:15:52.647 -08 000000044 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:15:52.647 -08 000000100 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:15:52.648 -08 000000105 INF: ===================Camera TDI=================== 17-03-02 13:15:52.648 -08 000000096 INF: ===================Camera TDI=================== 17-03-02 13:15:52.649 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:52.649 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:52.650 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:52.650 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:52.653 -08 000000044 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:15:52.721 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:15:52.721 -08 000000094 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:52.721 -08 000000094 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:52.785 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:15:52.785 -08 000000094 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:52.799 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:52.799 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:52.800 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:52.800 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:52.848 -08 000000094 INF: Y Motor: Recv v 0\r 17-03-02 13:15:52.848 -08 000000094 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:52.848 -08 000000094 INF: Y Motor: Set target position to 5797042 encoder counts 17-03-02 13:15:52.848 -08 000000094 INF: Y Motor: Xmit s r0xca 5797042\r 17-03-02 13:15:52.910 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:15:52.910 -08 000000094 INF: Y Motor: Start the move command 17-03-02 13:15:52.910 -08 000000094 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:52.949 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:52.949 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:52.950 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:52.950 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:52.971 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:15:52.971 -08 000000094 INF: Y Motor: WaitUntilStopped 61042 17-03-02 13:15:52.971 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:53.097 -08 000000094 INF: Y Motor: Unshifted Position: 5935479 17-03-02 13:15:53.099 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:53.099 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:53.100 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:53.100 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:53.147 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:53.249 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-03-02 13:15:53.249 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-03-02 13:15:53.249 -08 000000096 INF: ===================Camera #2 Frame #1=================== 17-03-02 13:15:53.250 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-03-02 13:15:53.250 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-03-02 13:15:53.250 -08 000000105 INF: ===================Camera #0 Frame #1=================== 17-03-02 13:15:53.271 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:53.287 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:53.287 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left=================== 17-03-02 13:15:53.403 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2. 17-03-02 13:15:53.403 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2 17-03-02 13:15:53.403 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2. 17-03-02 13:15:53.403 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2 17-03-02 13:15:53.403 -08 000000105 INF: ===================Camera #0 Frame #2=================== 17-03-02 13:15:53.403 -08 000000096 INF: ===================Camera #2 Frame #2=================== 17-03-02 13:15:53.408 -08 000000094 INF: Y Motor: Unshifted Position: 5888379 17-03-02 13:15:53.458 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:53.556 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:15:53.556 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:15:53.556 -08 000000105 INF: ===================Camera #0 Frame #4=================== 17-03-02 13:15:53.557 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:15:53.557 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:15:53.557 -08 000000096 INF: ===================Camera #2 Frame #4=================== 17-03-02 13:15:53.585 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:53.712 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:15:53.712 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:15:53.712 -08 000000105 INF: ===================Camera #0 Frame #5=================== 17-03-02 13:15:53.713 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:15:53.713 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:15:53.713 -08 000000096 INF: ===================Camera #2 Frame #5=================== 17-03-02 13:15:53.722 -08 000000094 INF: Y Motor: Unshifted Position: 5841669 17-03-02 13:15:53.772 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:53.829 -08 000000030 INF: FPGA: Recv ZWAIT 17-03-02 13:15:53.829 -08 000000030 INF: FPGA: Recv TDIYWAIT 17-03-02 13:15:53.829 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:53.829 -08 000000098 INF: ===================Serial=================== 17-03-02 13:15:53.831 -08 000000044 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:15:53.831 -08 000000098 INF: ===================Serial, Confirm position Z Motor=================== 17-03-02 13:15:53.831 -08 000000098 INF: ===================Serial=================== 17-03-02 13:15:53.832 -08 000000119 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:15:53.832 -08 000000065 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:15:53.832 -08 000000119 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:15:53.832 -08 000000119 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:15:53.832 -08 000000119 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:15:53.832 -08 000000065 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:15:53.832 -08 000000065 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:15:53.832 -08 000000065 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:15:53.832 -08 000000119 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:15:53.833 -08 000000098 INF: ====================================== 17-03-02 13:15:53.835 -08 000000065 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:15:53.865 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-03-02 13:15:53.865 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-03-02 13:15:53.865 -08 000000105 INF: ===================Camera #0 Frame #6=================== 17-03-02 13:15:53.866 -08 000000096 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-03-02 13:15:53.866 -08 000000096 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-03-02 13:15:53.866 -08 000000096 INF: ===================Camera #2 Frame #6=================== 17-03-02 13:15:53.868 -08 000000105 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-03-02 13:15:53.869 -08 000000105 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:53.869 -08 000000096 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-03-02 13:15:53.870 -08 000000096 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:15:53.892 -08 000000105 INF: Camera #0 ReleaseBuffer 17-03-02 13:15:53.892 -08 000000105 INF: ===================Camera TDI=================== 17-03-02 13:15:53.893 -08 000000105 INF: ====================================== 17-03-02 13:15:53.897 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:53.916 -08 000000096 INF: Camera #2 ReleaseBuffer 17-03-02 13:15:53.916 -08 000000096 INF: ===================Camera TDI=================== 17-03-02 13:15:53.917 -08 000000096 INF: ====================================== 17-03-02 13:15:53.919 -08 000000100 INF: ===================Camera TDI=================== 17-03-02 13:15:53.920 -08 000000100 INF: ====================================== 17-03-02 13:15:54.034 -08 000000094 INF: Y Motor: Unshifted Position: 5797063 17-03-02 13:15:54.084 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:54.202 -08 000000086 INF: FPGA: Recv EX2MV 17-03-02 13:15:54.202 -08 000000086 INF: FPGA: Recv EX1MV 17-03-02 13:15:54.202 -08 000000119 INF: Excitation Filter 2: Moved 107 steps in 369.6261 ms 17-03-02 13:15:54.202 -08 000000065 INF: Excitation Filter 1: Moved 107 steps in 369.5413 ms 17-03-02 13:15:54.202 -08 000000119 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.7906 ms 17-03-02 13:15:54.202 -08 000000119 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.9446 ms 17-03-02 13:15:54.202 -08 000000065 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.7336 ms 17-03-02 13:15:54.202 -08 000000065 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.9203 ms 17-03-02 13:15:54.202 -08 000000119 INF: ====================================== 17-03-02 13:15:54.203 -08 000000065 INF: ====================================== 17-03-02 13:15:54.204 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:54.205 -08 000000044 INF: ====================================== 17-03-02 13:15:54.219 -08 000000094 INF: Y Motor: Unshifted Position: 5797041 17-03-02 13:15:54.219 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:54.219 -08 000000094 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:54.281 -08 000000094 INF: Y Motor: Recv v 0\r 17-03-02 13:15:54.281 -08 000000094 INF: Y Motor: Moved to 62.9704 after 1310 ms 17-03-02 13:15:54.281 -08 000000094 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:54.287 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:54.287 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left=================== 17-03-02 13:15:54.345 -08 000000094 INF: Y Motor: Recv v 4097\r 17-03-02 13:15:54.345 -08 000000094 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:54.345 -08 000000094 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:54.407 -08 000000094 INF: Y Motor: Recv v 0\r 17-03-02 13:15:54.407 -08 000000094 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:54.407 -08 000000094 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:54.469 -08 000000094 INF: Y Motor: Recv v 134217728\r 17-03-02 13:15:54.469 -08 000000094 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:15:54.469 -08 000000094 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:54.469 -08 000000094 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:54.533 -08 000000094 INF: Y Motor: Recv v 0\r 17-03-02 13:15:54.533 -08 000000094 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:54.533 -08 000000094 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:54.533 -08 000000094 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:54.595 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:15:54.595 -08 000000094 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:54.595 -08 000000094 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:54.656 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:15:54.656 -08 000000094 INF: ====================================== 17-03-02 13:15:54.657 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:54.658 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:54.659 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:54.659 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:15:54.701 -08 000000030 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:15:54.701 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:54.765 -08 000000086 INF: FPGA: Recv TDIYERD 6297043 17-03-02 13:15:54.765 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:15:54.826 -08 000000085 INF: FPGA: Recv ZADCR 2423 17-03-02 13:15:54.826 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm 17-03-02 13:15:54.826 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:15:54.888 -08 000000060 INF: FPGA: Recv TDIPULSES 3073 17-03-02 13:15:54.888 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072 17-03-02 13:15:54.888 -08 000000042 INF: TDIScan finished after 7117.7105 ms 17-03-02 13:15:54.888 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-03-02 13:15:54.888 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-03-02 13:15:54.888 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:15:54.952 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:15:54.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:54.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:54.954 -08 000000104 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:15:54.954 -08 000000082 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:15:54.954 -08 000000085 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:15:54.954 -08 000000104 INF: ====================================== 17-03-02 13:15:54.954 -08 000000085 INF: ====================================== 17-03-02 13:15:54.954 -08 000000082 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:15:54.955 -08 000000082 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:15:55.031 -08 000000082 INF: Y Motor: Recv ok\r 17-03-02 13:15:55.031 -08 000000082 INF: ====================================== 17-03-02 13:15:55.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:55.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:55.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:15:55.077 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:55.077 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:15:55.103 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:55.103 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:15:55.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:55.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:15:55.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:15:55.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:55.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:55.174 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, ETF: Extracting coords=================== 17-03-02 13:15:55.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:55.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point=================== 17-03-02 13:15:55.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics=================== 17-03-02 13:15:55.287 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:55.287 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left=================== 17-03-02 13:15:55.870 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point=================== 17-03-02 13:15:55.895 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0872569646885853Best Z position at top surface = -0.159121904230779Best Z position at top surface + compensator offset = -0.136421904230779 C:162,L:3,T 17-03-02 13:15:55.896 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159121904230779 17-03-02 13:15:55.896 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97279 17-03-02 13:15:55.896 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0872569646885853 17-03-02 13:15:55.896 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.62676 17-03-02 13:15:55.896 -08 000000042 INF: Z-height at LaneTopSurface is -0.159121904230779. 17-03-02 13:15:55.896 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:56.031 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:15:56.031 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:15:56.074 -08 000000078 INF: FPGA: Recv ZSTEP 17-03-02 13:15:56.074 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-03-02 13:15:56.076 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.076 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543 17-03-02 13:15:56.076 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.077 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.078 -08 000000070 INF: ===================Move Tilt Motor 1=================== 17-03-02 13:15:56.078 -08 000000036 INF: ===================Move Tilt Motor 3=================== 17-03-02 13:15:56.078 -08 000000109 INF: ===================Move Tilt Motor 2=================== 17-03-02 13:15:56.078 -08 000000036 INF: ====================================== 17-03-02 13:15:56.078 -08 000000070 INF: ====================================== 17-03-02 13:15:56.079 -08 000000109 INF: ====================================== 17-03-02 13:15:56.080 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.082 -08 000000042 INF: ETF Best Z: -0.1364219 mm (35762 DAC) 17-03-02 13:15:56.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.083 -08 000000042 INF: Compensator: Moving IntoPath 17-03-02 13:15:56.083 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n 17-03-02 13:15:56.585 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:56.586 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left=================== 17-03-02 13:15:56.588 -08 000000029 INF: FPGA: Recv MIOCOMPF 17-03-02 13:15:56.588 -08 000000042 INF: Compensator: Moved IntoPath in 505 ms 17-03-02 13:15:56.588 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.589 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:15:56.595 -08 000000042 INF: Swath 1 position calculated to be: {X=74.16164, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface 17-03-02 13:15:56.595 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26964, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface 17-03-02 13:15:56.601 -08 000000042 INF: Swath 0: Converted transform from (-59.87538, 55.87632) pixels to (-0.0207, 0.01932) mm. 17-03-02 13:15:56.607 -08 000000042 INF: Swath 1: Converted transform from (-81.90414, 54.72649) pixels to (-0.02829, 0.018975) mm. 17-03-02 13:15:56.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-03-02 13:15:56.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-03-02 13:15:56.608 -08 000000042 INF: Transformed XStagePosition from 74.16164 mm to 74.1409363523126 mm. 17-03-02 13:15:56.619 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5724093554318 mm. 17-03-02 13:15:56.619 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3724093554318 mm. 17-03-02 13:15:56.619 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4631593554318 mm. 17-03-02 13:15:56.621 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:56.621 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:15:56.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:56.622 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1 17-03-02 13:15:56.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:56.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:56.628 -08 000000085 INF: ===================MoveEmissionFilters=================== 17-03-02 13:15:56.628 -08 000000060 INF: ===================Move X,Y=================== 17-03-02 13:15:56.628 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:56.629 -08 000000027 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:56.629 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-03-02 13:15:56.629 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:56.629 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:56.629 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:56.629 -08 000000060 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:15:56.630 -08 000000027 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:56.630 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:56.630 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:15:56.630 -08 000000056 INF: ===================Move X Motor without settling=================== 17-03-02 13:15:56.630 -08 000000083 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:56.631 -08 000000056 INF: X Motor: Xmit PR VM\n 17-03-02 13:15:56.631 -08 000000083 INF: Y Motor: Moving to 64.5724 mm @25.000 mm/sec, started at 62.9704 mm 17-03-02 13:15:56.631 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:15:56.631 -08 000000083 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:56.631 -08 000000075 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:15:56.631 -08 000000074 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:15:56.631 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:56.631 -08 000000119 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:15:56.631 -08 000000082 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:15:56.631 -08 000000091 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:15:56.631 -08 000000033 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:15:56.631 -08 000000033 INF: ====================================== 17-03-02 13:15:56.632 -08 000000075 INF: ====================================== 17-03-02 13:15:56.632 -08 000000082 INF: ====================================== 17-03-02 13:15:56.632 -08 000000030 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:15:56.632 -08 000000030 INF: Z Motor: Moving to -0.1564 mm, started at -0.0100 mm 17-03-02 13:15:56.632 -08 000000091 INF: ====================================== 17-03-02 13:15:56.632 -08 000000030 INF: FPGA: Xmit ZTRG 0\n 17-03-02 13:15:56.633 -08 000000119 INF: ====================================== 17-03-02 13:15:56.633 -08 000000028 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:15:56.633 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:15:56.633 -08 000000028 INF: ====================================== 17-03-02 13:15:56.633 -08 000000078 INF: ====================================== 17-03-02 13:15:56.634 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:15:56.634 -08 000000074 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:15:56.634 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:15:56.634 -08 000000074 INF: ====================================== 17-03-02 13:15:56.635 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:15:56.635 -08 000000057 INF: ====================================== 17-03-02 13:15:56.635 -08 000000047 INF: ====================================== 17-03-02 13:15:56.636 -08 000000027 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:15:56.636 -08 000000050 INF: ====================================== 17-03-02 13:15:56.637 -08 000000027 INF: ====================================== 17-03-02 13:15:56.638 -08 000000085 INF: ====================================== 17-03-02 13:15:56.651 -08 000000115 INF: FPGA: Recv ZTRG 17-03-02 13:15:56.651 -08 000000030 INF: FPGA: Xmit ZYT 0 3\n 17-03-02 13:15:56.699 -08 000000083 INF: Y Motor: Recv ok\r 17-03-02 13:15:56.699 -08 000000083 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:56.699 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:56.699 -08 000000056 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:15:56.699 -08 000000056 INF: X Motor: Xmit PR VI\n 17-03-02 13:15:56.715 -08 000000097 INF: FPGA: Recv ZYT 17-03-02 13:15:56.715 -08 000000030 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-03-02 13:15:56.715 -08 000000030 INF: FPGA: Xmit ZMV 41004\n 17-03-02 13:15:56.761 -08 000000056 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:15:56.761 -08 000000056 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:15:56.761 -08 000000083 INF: Y Motor: Recv ok\r 17-03-02 13:15:56.761 -08 000000056 INF: X Motor: Moving to 74.1409 mm @15.000 mm/sec, started at 74.7153 mm 17-03-02 13:15:56.761 -08 000000083 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:56.761 -08 000000056 INF: X Motor: Xmit MA 6202\n 17-03-02 13:15:56.777 -08 000000027 INF: FPGA: Recv @LOG Trigger Camera 17-03-02 13:15:56.777 -08 000000006 INF: FPGA: Trigger Camera 17-03-02 13:15:56.825 -08 000000056 INF: X Motor: Recv MA 6202\r\n> 17-03-02 13:15:56.825 -08 000000083 INF: Y Motor: Recv v 0\r 17-03-02 13:15:56.825 -08 000000083 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:56.825 -08 000000056 INF: X Motor: WaitUntilStopped 60038 17-03-02 13:15:56.825 -08 000000083 INF: Y Motor: Set target position to 5957241 encoder counts 17-03-02 13:15:56.825 -08 000000083 INF: Y Motor: Xmit s r0xca 5957241\r 17-03-02 13:15:56.887 -08 000000083 INF: Y Motor: Recv ok\r 17-03-02 13:15:56.887 -08 000000083 INF: Y Motor: Start the move command 17-03-02 13:15:56.887 -08 000000083 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:56.900 -08 000000066 INF: FPGA: Recv ZMV 17-03-02 13:15:56.900 -08 000000030 INF: Z Motor: MoveAndTrigger 'ZMV' command took 184.9763 ms 17-03-02 13:15:56.900 -08 000000030 INF: FPGA: Xmit ZDACR\n 17-03-02 13:15:56.951 -08 000000083 INF: Y Motor: Recv ok\r 17-03-02 13:15:56.951 -08 000000083 INF: Y Motor: WaitUntilStopped 60064 17-03-02 13:15:56.951 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:56.965 -08 000000115 INF: FPGA: Recv ZDACR 41004 17-03-02 13:15:56.965 -08 000000030 INF: Z Motor: MoveAndTrigger took 332.3941 ms w/comms 17-03-02 13:15:56.965 -08 000000030 INF: Z Motor: After move to -0.1564, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:15:56.965 -08 000000030 INF: Z Motor: MoveAbsStepped took 332.5788 ms 17-03-02 13:15:56.965 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:56.967 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-03-02 13:15:56.968 -08 000000096 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:56.968 -08 000000053 INF: ===================Camera Arm TDI=================== 17-03-02 13:15:56.968 -08 000000096 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:56.969 -08 000000053 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:56.969 -08 000000096 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:15:56.969 -08 000000053 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:56.970 -08 000000096 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:56.970 -08 000000096 INF: FPGA: Xmit ZSEL 3\n 17-03-02 13:15:57.026 -08 000000085 INF: FPGA: Recv ZSEL 17-03-02 13:15:57.026 -08 000000096 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:57.027 -08 000000096 INF: FPGA: Xmit TDIBB 1\n 17-03-02 13:15:57.075 -08 000000083 INF: Y Motor: Unshifted Position: 5881044 17-03-02 13:15:57.088 -08 000000129 INF: FPGA: Recv TDIBB 17-03-02 13:15:57.088 -08 000000096 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:15:57.089 -08 000000096 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:15:57.090 -08 000000096 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:57.091 -08 000000096 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-03-02 13:15:57.091 -08 000000096 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-03-02 13:15:57.092 -08 000000096 INF: FPGA: Xmit ZSTEP 1792263\n 17-03-02 13:15:57.125 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:57.149 -08 000000075 INF: FPGA: Recv ZSTEP 17-03-02 13:15:57.149 -08 000000096 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:57.151 -08 000000096 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:15:57.151 -08 000000096 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:57.153 -08 000000096 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:15:57.153 -08 000000096 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:15:57.153 -08 000000096 INF: Z Motor: Arming to move to -0.1164 mm 17-03-02 13:15:57.153 -08 000000096 INF: FPGA: Xmit ZYT 6437241 4\n 17-03-02 13:15:57.214 -08 000000044 INF: FPGA: Recv ZYT 17-03-02 13:15:57.214 -08 000000096 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381044 enc / 63.810 mm / ) = 6437241 enc / 64.372 mm 17-03-02 13:15:57.214 -08 000000096 INF: FPGA: Xmit ZARM 30519\n 17-03-02 13:15:57.248 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:57.262 -08 000000056 INF: X Motor: Xmit PR ER\n 17-03-02 13:15:57.276 -08 000000085 INF: FPGA: Recv ZARM 17-03-02 13:15:57.276 -08 000000096 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9325 ms 17-03-02 13:15:57.276 -08 000000096 INF: Z Motor: ArmAbsStepped took 122.7431 ms 17-03-02 13:15:57.276 -08 000000096 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:15:57.277 -08 000000096 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:57.279 -08 000000096 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:15:57.279 -08 000000096 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:57.281 -08 000000096 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:15:57.281 -08 000000096 INF: ===================TDI Scan Setup=================== 17-03-02 13:15:57.282 -08 000000096 INF: ====================================== 17-03-02 13:15:57.288 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:57.288 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:57.288 -08 000000018 INF: WaitCommand(5000) end 17-03-02 13:15:57.288 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:15:57.324 -08 000000056 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:15:57.324 -08 000000056 INF: X Motor: Moved to 74.1416 after 499 ms 17-03-02 13:15:57.324 -08 000000056 INF: ====================================== 17-03-02 13:15:57.386 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:15:57.386 -08 000000083 INF: Y Motor: Unshifted Position: 5957242 17-03-02 13:15:57.386 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:15:57.386 -08 000000083 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:57.449 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF) 17-03-02 13:15:57.449 -08 000000018 INF: Current Position of Pump is: 15360 17-03-02 13:15:57.450 -08 000000083 INF: Y Motor: Recv v 0\r 17-03-02 13:15:57.450 -08 000000083 INF: Y Motor: Moved to 64.5724 after 499 ms 17-03-02 13:15:57.450 -08 000000083 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:15:57.512 -08 000000083 INF: Y Motor: Recv v 4096\r 17-03-02 13:15:57.512 -08 000000083 INF: Y Motor: Status After move finished OK: 17-03-02 13:15:57.512 -08 000000083 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:57.549 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:15:57.573 -08 000000083 INF: Y Motor: Recv v 0\r 17-03-02 13:15:57.573 -08 000000083 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:57.573 -08 000000083 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:15:57.634 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF) 17-03-02 13:15:57.634 -08 000000018 INF: Current Position of Pump is: 15360 17-03-02 13:15:57.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC=================== 17-03-02 13:15:57.635 -08 000000083 INF: Y Motor: Recv v 402653184\r 17-03-02 13:15:57.635 -08 000000083 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:15:57.635 -08 000000083 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:15:57.635 -08 000000083 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:15:57.697 -08 000000083 INF: Y Motor: Recv v 0\r 17-03-02 13:15:57.697 -08 000000083 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:15:57.697 -08 000000083 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:15:57.697 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:57.734 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD15360R\r 17-03-02 13:15:57.761 -08 000000083 INF: Y Motor: Recv ok\r 17-03-02 13:15:57.761 -08 000000083 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:15:57.761 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:57.822 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:57.823 -08 000000083 INF: Y Motor: Recv ok\r 17-03-02 13:15:57.823 -08 000000083 INF: ====================================== 17-03-02 13:15:57.824 -08 000000060 INF: ===================Move X,Y=================== 17-03-02 13:15:57.825 -08 000000060 INF: ====================================== 17-03-02 13:15:57.922 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:57.929 -08 000000053 INF: Camera #0 AttachBuffer (imageDataPtr = 56924901424 imgPtr = 56924901424 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:15:57.929 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:15:57.929 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:57.944 -08 000000053 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:57.946 -08 000000053 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:15:58.010 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:58.260 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:58.321 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:58.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:58.632 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:58.882 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:58.945 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:58.947 -08 000000053 INF: Camera #2 AttachBuffer (imageDataPtr = 64223121456 imgPtr = 65129091120 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:15:58.947 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:15:58.947 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:15:58.962 -08 000000053 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:15:58.964 -08 000000053 INF: ===================Camera Arm TDI=================== 17-03-02 13:15:58.965 -08 000000053 INF: ====================================== 17-03-02 13:15:58.966 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:15:58.967 -08 000000030 INF: ====================================== 17-03-02 13:15:58.968 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:15:58.969 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:58.969 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-03-02 13:15:58.969 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-03-02 13:15:59.010 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:15:59.010 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-03-02 13:15:59.023 -08 000000060 INF: FPGA: Recv ZFREQCL 17-03-02 13:15:59.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:15:59.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:59.023 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:15:59.085 -08 000000082 INF: FPGA: Recv TDIYERD 6457242 17-03-02 13:15:59.085 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457242 counts (64.572 mm) 17-03-02 13:15:59.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:59.086 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:59.086 -08 000000101 INF: ===================TDI FPGA Arm=================== 17-03-02 13:15:59.086 -08 000000072 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:15:59.087 -08 000000072 INF: ====================================== 17-03-02 13:15:59.087 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:59.088 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:15:59.088 -08 000000101 INF: FPGA: Xmit TDIYPOS 6346316\n 17-03-02 13:15:59.147 -08 000000119 INF: FPGA: Recv TDIYPOS 17-03-02 13:15:59.147 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:59.148 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:15:59.149 -08 000000101 INF: FPGA: Xmit TDIYARM3 139264 6437241 1 1\n 17-03-02 13:15:59.195 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:59.211 -08 000000105 INF: FPGA: Recv TDIYARM3 17-03-02 13:15:59.211 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:15:59.212 -08 000000101 INF: ===================TDI FPGA Arm=================== 17-03-02 13:15:59.213 -08 000000101 INF: ====================================== 17-03-02 13:15:59.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:15:59.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:15:59.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:59.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:59.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:59.217 -08 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:15:59.217 -08 000000082 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:15:59.217 -08 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:15:59.217 -08 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:15:59.217 -08 000000085 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:15:59.217 -08 000000085 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:15:59.217 -08 000000082 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:15:59.217 -08 000000082 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:15:59.217 -08 000000082 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:15:59.218 -08 000000082 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:15:59.256 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:59.506 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:59.570 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:59.584 -08 000000100 INF: FPGA: Recv EX2MV 17-03-02 13:15:59.584 -08 000000100 INF: FPGA: Recv EX1MV 17-03-02 13:15:59.584 -08 000000082 INF: Excitation Filter 1: Moved -107 steps in 366.6296 ms 17-03-02 13:15:59.584 -08 000000085 INF: Excitation Filter 2: Moved -107 steps in 366.8307 ms 17-03-02 13:15:59.584 -08 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.9242 ms 17-03-02 13:15:59.584 -08 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.9942 ms 17-03-02 13:15:59.584 -08 000000082 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.7306 ms 17-03-02 13:15:59.584 -08 000000082 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.1078 ms 17-03-02 13:15:59.584 -08 000000085 INF: ====================================== 17-03-02 13:15:59.584 -08 000000082 INF: ====================================== 17-03-02 13:15:59.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:59.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:15:59.587 -08 000000102 INF: ===================Camera TDI=================== 17-03-02 13:15:59.587 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:15:59.587 -08 000000098 INF: ===================FPGA Z Wait=================== 17-03-02 13:15:59.587 -08 000000078 INF: ===================Move Y Motor without settling=================== 17-03-02 13:15:59.588 -08 000000078 INF: Y Motor: Moving to 14.9241 mm @6.500 mm/sec, started at 64.5724 mm 17-03-02 13:15:59.588 -08 000000078 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:15:59.588 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:15:59.588 -08 000000102 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:15:59.588 -08 000000044 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:15:59.588 -08 000000044 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:15:59.589 -08 000000098 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:15:59.589 -08 000000028 INF: ===================Camera TDI=================== 17-03-02 13:15:59.589 -08 000000070 INF: ===================Camera TDI=================== 17-03-02 13:15:59.591 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:59.591 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:59.591 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:59.591 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:59.632 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:15:59.632 -08 000000078 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:15:59.632 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:15:59.694 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:15:59.694 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:15:59.741 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:59.741 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:59.741 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:59.741 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:59.758 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:15:59.758 -08 000000078 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:15:59.758 -08 000000078 INF: Y Motor: Set target position to 992407 encoder counts 17-03-02 13:15:59.758 -08 000000078 INF: Y Motor: Xmit s r0xca 992407\r 17-03-02 13:15:59.820 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:15:59.820 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:15:59.820 -08 000000078 INF: Y Motor: Start the move command 17-03-02 13:15:59.820 -08 000000078 INF: Y Motor: Xmit t 1\r 17-03-02 13:15:59.881 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:15:59.882 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:15:59.882 -08 000000078 INF: Y Motor: WaitUntilStopped 67638 17-03-02 13:15:59.882 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:15:59.891 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:59.891 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:59.891 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:15:59.891 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:15:59.957 -08 000000057 INF: FPGA: Recv ZWAIT 17-03-02 13:15:59.957 -08 000000098 INF: ====================================== 17-03-02 13:16:00.006 -08 000000078 INF: Y Motor: Unshifted Position: 5895387 17-03-02 13:16:00.041 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:16:00.041 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:16:00.041 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:16:00.041 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:16:00.041 -08 000000070 INF: ===================Camera #2 Frame #5=================== 17-03-02 13:16:00.041 -08 000000028 INF: ===================Camera #0 Frame #5=================== 17-03-02 13:16:00.056 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:00.131 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:00.182 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:00.193 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:00.193 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-03-02 13:16:00.193 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-02 13:16:00.206 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-03-02 13:16:00.206 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-03-02 13:16:00.206 -08 000000028 INF: ===================Camera #0 Frame #11=================== 17-03-02 13:16:00.207 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-03-02 13:16:00.207 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-03-02 13:16:00.207 -08 000000070 INF: ===================Camera #2 Frame #11=================== 17-03-02 13:16:00.320 -08 000000078 INF: Y Motor: Unshifted Position: 5691295 17-03-02 13:16:00.370 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:00.374 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:16:00.374 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:16:00.374 -08 000000028 INF: ===================Camera #0 Frame #17=================== 17-03-02 13:16:00.376 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:16:00.376 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:16:00.376 -08 000000070 INF: ===================Camera #2 Frame #17=================== 17-03-02 13:16:00.493 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:00.542 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24. 17-03-02 13:16:00.542 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24 17-03-02 13:16:00.542 -08 000000028 INF: ===================Camera #0 Frame #24=================== 17-03-02 13:16:00.545 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24. 17-03-02 13:16:00.545 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24 17-03-02 13:16:00.545 -08 000000070 INF: ===================Camera #2 Frame #24=================== 17-03-02 13:16:00.631 -08 000000078 INF: Y Motor: Unshifted Position: 5489149 17-03-02 13:16:00.681 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:00.715 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-03-02 13:16:00.715 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-03-02 13:16:00.715 -08 000000028 INF: ===================Camera #0 Frame #30=================== 17-03-02 13:16:00.718 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-03-02 13:16:00.718 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-03-02 13:16:00.718 -08 000000070 INF: ===================Camera #2 Frame #30=================== 17-03-02 13:16:00.807 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:00.883 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-03-02 13:16:00.883 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-03-02 13:16:00.883 -08 000000028 INF: ===================Camera #0 Frame #36=================== 17-03-02 13:16:00.887 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-03-02 13:16:00.887 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-03-02 13:16:00.887 -08 000000070 INF: ===================Camera #2 Frame #36=================== 17-03-02 13:16:00.942 -08 000000078 INF: Y Motor: Unshifted Position: 5286773 17-03-02 13:16:00.992 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:01.052 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:16:01.052 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:16:01.052 -08 000000028 INF: ===================Camera #0 Frame #42=================== 17-03-02 13:16:01.056 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:16:01.056 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:16:01.056 -08 000000070 INF: ===================Camera #2 Frame #42=================== 17-03-02 13:16:01.118 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:01.221 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-03-02 13:16:01.221 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-03-02 13:16:01.221 -08 000000028 INF: ===================Camera #0 Frame #49=================== 17-03-02 13:16:01.225 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-03-02 13:16:01.225 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-03-02 13:16:01.225 -08 000000070 INF: ===================Camera #2 Frame #49=================== 17-03-02 13:16:01.256 -08 000000078 INF: Y Motor: Unshifted Position: 5082456 17-03-02 13:16:01.293 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-03-02 13:16:01.306 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:01.379 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:01.394 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-03-02 13:16:01.394 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-03-02 13:16:01.394 -08 000000028 INF: ===================Camera #0 Frame #55=================== 17-03-02 13:16:01.398 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-03-02 13:16:01.398 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-03-02 13:16:01.398 -08 000000070 INF: ===================Camera #2 Frame #55=================== 17-03-02 13:16:01.430 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:01.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:01.562 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:16:01.562 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:16:01.562 -08 000000028 INF: ===================Camera #0 Frame #61=================== 17-03-02 13:16:01.567 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:01.567 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:16:01.567 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:16:01.567 -08 000000070 INF: ===================Camera #2 Frame #61=================== 17-03-02 13:16:01.568 -08 000000078 INF: Y Motor: Unshifted Position: 4880304 17-03-02 13:16:01.618 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:01.731 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:16:01.731 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:16:01.731 -08 000000028 INF: ===================Camera #0 Frame #67=================== 17-03-02 13:16:01.736 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:16:01.736 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:16:01.736 -08 000000070 INF: ===================Camera #2 Frame #67=================== 17-03-02 13:16:01.744 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:01.817 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:01.878 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:01.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:01.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 17-03-02 13:16:01.879 -08 000000078 INF: Y Motor: Unshifted Position: 4677935 17-03-02 13:16:01.900 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-03-02 13:16:01.900 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-03-02 13:16:01.900 -08 000000028 INF: ===================Camera #0 Frame #74=================== 17-03-02 13:16:01.905 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-03-02 13:16:01.905 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-03-02 13:16:01.905 -08 000000070 INF: ===================Camera #2 Frame #74=================== 17-03-02 13:16:01.929 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:02.056 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:02.071 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:16:02.071 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:16:02.071 -08 000000028 INF: ===================Camera #0 Frame #80=================== 17-03-02 13:16:02.077 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:16:02.077 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:16:02.077 -08 000000070 INF: ===================Camera #2 Frame #80=================== 17-03-02 13:16:02.191 -08 000000078 INF: Y Motor: Unshifted Position: 4473828 17-03-02 13:16:02.240 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:16:02.240 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:16:02.240 -08 000000028 INF: ===================Camera #0 Frame #86=================== 17-03-02 13:16:02.241 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:02.246 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:16:02.246 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:16:02.246 -08 000000070 INF: ===================Camera #2 Frame #86=================== 17-03-02 13:16:02.367 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:02.409 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:16:02.409 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:16:02.409 -08 000000028 INF: ===================Camera #0 Frame #92=================== 17-03-02 13:16:02.415 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:16:02.415 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:16:02.415 -08 000000070 INF: ===================Camera #2 Frame #92=================== 17-03-02 13:16:02.502 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:02.503 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:02.503 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:02.504 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:02.505 -08 000000078 INF: Y Motor: Unshifted Position: 4271028 17-03-02 13:16:02.555 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:02.565 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:02.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (8)=================== 17-03-02 13:16:02.565 -08 000000018 INF: Valve A1: Go to position 8 17-03-02 13:16:02.565 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:16:02.578 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-03-02 13:16:02.578 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-03-02 13:16:02.578 -08 000000028 INF: ===================Camera #0 Frame #98=================== 17-03-02 13:16:02.584 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-03-02 13:16:02.584 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-03-02 13:16:02.584 -08 000000070 INF: ===================Camera #2 Frame #99=================== 17-03-02 13:16:02.627 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 4\r 17-03-02 13:16:02.627 -08 000000018 INF: Valve A1: 23.461 seconds since last move, > 10.000 seconds required between moves 17-03-02 13:16:02.627 -08 000000018 INF: Valve A1: Taking longest path 'CC' from 4 to 8 to avoid 7 17-03-02 13:16:02.627 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC8\r 17-03-02 13:16:02.627 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-03-02 13:16:02.627 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:16:02.680 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:02.746 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-03-02 13:16:02.746 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-03-02 13:16:02.746 -08 000000028 INF: ===================Camera #0 Frame #105=================== 17-03-02 13:16:02.757 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-03-02 13:16:02.757 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-03-02 13:16:02.757 -08 000000070 INF: ===================Camera #2 Frame #105=================== 17-03-02 13:16:02.816 -08 000000078 INF: Y Motor: Unshifted Position: 4068659 17-03-02 13:16:02.866 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:02.918 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:16:02.918 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:16:02.918 -08 000000028 INF: ===================Camera #0 Frame #111=================== 17-03-02 13:16:02.927 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:16:02.927 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:16:02.927 -08 000000070 INF: ===================Camera #2 Frame #111=================== 17-03-02 13:16:02.990 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:03.087 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-03-02 13:16:03.087 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-03-02 13:16:03.087 -08 000000028 INF: ===================Camera #0 Frame #117=================== 17-03-02 13:16:03.096 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118. 17-03-02 13:16:03.096 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118 17-03-02 13:16:03.096 -08 000000070 INF: ===================Camera #2 Frame #118=================== 17-03-02 13:16:03.128 -08 000000078 INF: Y Motor: Unshifted Position: 3865861 17-03-02 13:16:03.178 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:03.256 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-03-02 13:16:03.256 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-03-02 13:16:03.256 -08 000000028 INF: ===================Camera #0 Frame #123=================== 17-03-02 13:16:03.269 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-03-02 13:16:03.269 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-03-02 13:16:03.269 -08 000000070 INF: ===================Camera #2 Frame #124=================== 17-03-02 13:16:03.304 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:03.316 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 8\r 17-03-02 13:16:03.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:03.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 17-03-02 13:16:03.425 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:16:03.425 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:16:03.425 -08 000000028 INF: ===================Camera #0 Frame #130=================== 17-03-02 13:16:03.439 -08 000000078 INF: Y Motor: Unshifted Position: 3663492 17-03-02 13:16:03.439 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:16:03.439 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:16:03.439 -08 000000070 INF: ===================Camera #2 Frame #130=================== 17-03-02 13:16:03.489 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:03.597 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-03-02 13:16:03.597 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-03-02 13:16:03.597 -08 000000028 INF: ===================Camera #0 Frame #136=================== 17-03-02 13:16:03.609 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-03-02 13:16:03.609 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-03-02 13:16:03.609 -08 000000070 INF: ===================Camera #2 Frame #136=================== 17-03-02 13:16:03.615 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:03.753 -08 000000078 INF: Y Motor: Unshifted Position: 3459825 17-03-02 13:16:03.766 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-03-02 13:16:03.766 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-03-02 13:16:03.766 -08 000000028 INF: ===================Camera #0 Frame #142=================== 17-03-02 13:16:03.779 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-03-02 13:16:03.779 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-03-02 13:16:03.779 -08 000000070 INF: ===================Camera #2 Frame #143=================== 17-03-02 13:16:03.803 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:03.926 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:03.935 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148. 17-03-02 13:16:03.935 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148 17-03-02 13:16:03.935 -08 000000028 INF: ===================Camera #0 Frame #148=================== 17-03-02 13:16:03.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:03.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:03.936 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:03.952 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-03-02 13:16:03.952 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-03-02 13:16:03.952 -08 000000070 INF: ===================Camera #2 Frame #149=================== 17-03-02 13:16:03.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:04.007 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000 17-03-02 13:16:04.065 -08 000000078 INF: Y Motor: Unshifted Position: 3258333 17-03-02 13:16:04.099 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:16:04.104 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:16:04.104 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:16:04.104 -08 000000028 INF: ===================Camera #0 Frame #155=================== 17-03-02 13:16:04.115 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:04.122 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:16:04.122 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:16:04.122 -08 000000070 INF: ===================Camera #2 Frame #155=================== 17-03-02 13:16:04.187 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-03-02 13:16:04.187 -08 000000018 INF: Current Position of Pump is: 0 17-03-02 13:16:04.239 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:04.277 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-03-02 13:16:04.277 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-03-02 13:16:04.277 -08 000000028 INF: ===================Camera #0 Frame #161=================== 17-03-02 13:16:04.287 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-03-02 13:16:04.292 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-03-02 13:16:04.292 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-03-02 13:16:04.292 -08 000000070 INF: ===================Camera #2 Frame #162=================== 17-03-02 13:16:04.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:04.376 -08 000000078 INF: Y Motor: Unshifted Position: 3053578 17-03-02 13:16:04.426 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:04.446 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167. 17-03-02 13:16:04.446 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167 17-03-02 13:16:04.446 -08 000000028 INF: ===================Camera #0 Frame #167=================== 17-03-02 13:16:04.465 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:16:04.465 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:16:04.465 -08 000000070 INF: ===================Camera #2 Frame #168=================== 17-03-02 13:16:04.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:04.501 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:04.552 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:04.616 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:16:04.616 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:16:04.616 -08 000000028 INF: ===================Camera #0 Frame #174=================== 17-03-02 13:16:04.634 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:16:04.634 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:16:04.634 -08 000000070 INF: ===================Camera #2 Frame #174=================== 17-03-02 13:16:04.687 -08 000000078 INF: Y Motor: Unshifted Position: 2851867 17-03-02 13:16:04.737 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:04.751 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:04.790 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-03-02 13:16:04.790 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-03-02 13:16:04.790 -08 000000028 INF: ===================Camera #0 Frame #180=================== 17-03-02 13:16:04.804 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-03-02 13:16:04.804 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-03-02 13:16:04.804 -08 000000070 INF: ===================Camera #2 Frame #180=================== 17-03-02 13:16:04.812 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:04.863 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:04.912 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-03-02 13:16:04.959 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186. 17-03-02 13:16:04.959 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186 17-03-02 13:16:04.959 -08 000000028 INF: ===================Camera #0 Frame #186=================== 17-03-02 13:16:04.973 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:16:04.973 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:16:04.973 -08 000000070 INF: ===================Camera #2 Frame #187=================== 17-03-02 13:16:04.998 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:04.999 -08 000000078 INF: Y Motor: Unshifted Position: 2649502 17-03-02 13:16:05.049 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:05.098 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:05.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:05.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB=================== 17-03-02 13:16:05.128 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192. 17-03-02 13:16:05.128 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192 17-03-02 13:16:05.128 -08 000000028 INF: ===================Camera #0 Frame #192=================== 17-03-02 13:16:05.146 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:16:05.146 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:16:05.146 -08 000000070 INF: ===================Camera #2 Frame #193=================== 17-03-02 13:16:05.175 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:05.224 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP7680R\r 17-03-02 13:16:05.298 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-03-02 13:16:05.298 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-03-02 13:16:05.298 -08 000000028 INF: ===================Camera #0 Frame #199=================== 17-03-02 13:16:05.312 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:05.313 -08 000000078 INF: Y Motor: Unshifted Position: 2444757 17-03-02 13:16:05.317 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-03-02 13:16:05.317 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-03-02 13:16:05.317 -08 000000070 INF: ===================Camera #2 Frame #199=================== 17-03-02 13:16:05.363 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:05.412 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:05.471 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205. 17-03-02 13:16:05.471 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205 17-03-02 13:16:05.471 -08 000000028 INF: ===================Camera #0 Frame #205=================== 17-03-02 13:16:05.487 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:05.487 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-03-02 13:16:05.487 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-03-02 13:16:05.487 -08 000000070 INF: ===================Camera #2 Frame #206=================== 17-03-02 13:16:05.497 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:05.624 -08 000000078 INF: Y Motor: Unshifted Position: 2242604 17-03-02 13:16:05.641 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211. 17-03-02 13:16:05.641 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211 17-03-02 13:16:05.641 -08 000000028 INF: ===================Camera #0 Frame #211=================== 17-03-02 13:16:05.661 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-03-02 13:16:05.661 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-03-02 13:16:05.661 -08 000000070 INF: ===================Camera #2 Frame #212=================== 17-03-02 13:16:05.674 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:05.747 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:05.801 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:05.809 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217. 17-03-02 13:16:05.809 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217 17-03-02 13:16:05.809 -08 000000028 INF: ===================Camera #0 Frame #217=================== 17-03-02 13:16:05.811 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:05.830 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-03-02 13:16:05.830 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-03-02 13:16:05.830 -08 000000070 INF: ===================Camera #2 Frame #218=================== 17-03-02 13:16:05.936 -08 000000078 INF: Y Motor: Unshifted Position: 2039593 17-03-02 13:16:05.978 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224. 17-03-02 13:16:05.978 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224 17-03-02 13:16:05.978 -08 000000028 INF: ===================Camera #0 Frame #224=================== 17-03-02 13:16:05.986 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:05.999 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224. 17-03-02 13:16:05.999 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224 17-03-02 13:16:05.999 -08 000000070 INF: ===================Camera #2 Frame #224=================== 17-03-02 13:16:06.061 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:06.112 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:06.122 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:06.151 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230. 17-03-02 13:16:06.151 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230 17-03-02 13:16:06.151 -08 000000028 INF: ===================Camera #0 Frame #230=================== 17-03-02 13:16:06.170 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-03-02 13:16:06.170 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-03-02 13:16:06.170 -08 000000070 INF: ===================Camera #2 Frame #231=================== 17-03-02 13:16:06.247 -08 000000078 INF: Y Motor: Unshifted Position: 1838093 17-03-02 13:16:06.297 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:06.321 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236. 17-03-02 13:16:06.321 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236 17-03-02 13:16:06.321 -08 000000028 INF: ===================Camera #0 Frame #236=================== 17-03-02 13:16:06.344 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237. 17-03-02 13:16:06.344 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237 17-03-02 13:16:06.344 -08 000000070 INF: ===================Camera #2 Frame #237=================== 17-03-02 13:16:06.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:06.423 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:06.434 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:06.491 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243. 17-03-02 13:16:06.491 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243 17-03-02 13:16:06.491 -08 000000028 INF: ===================Camera #0 Frame #243=================== 17-03-02 13:16:06.515 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243. 17-03-02 13:16:06.515 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243 17-03-02 13:16:06.515 -08 000000070 INF: ===================Camera #2 Frame #243=================== 17-03-02 13:16:06.560 -08 000000078 INF: Y Motor: Unshifted Position: 1635076 17-03-02 13:16:06.610 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:06.664 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-03-02 13:16:06.664 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-03-02 13:16:06.664 -08 000000028 INF: ===================Camera #0 Frame #249=================== 17-03-02 13:16:06.684 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:06.686 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-03-02 13:16:06.686 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-03-02 13:16:06.686 -08 000000070 INF: ===================Camera #2 Frame #250=================== 17-03-02 13:16:06.735 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:06.746 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:06.834 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-03-02 13:16:06.834 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-03-02 13:16:06.834 -08 000000028 INF: ===================Camera #0 Frame #255=================== 17-03-02 13:16:06.860 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256. 17-03-02 13:16:06.860 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256 17-03-02 13:16:06.860 -08 000000070 INF: ===================Camera #2 Frame #256=================== 17-03-02 13:16:06.873 -08 000000078 INF: Y Motor: Unshifted Position: 1432045 17-03-02 13:16:06.923 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:06.996 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:07.004 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261. 17-03-02 13:16:07.004 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261 17-03-02 13:16:07.004 -08 000000028 INF: ===================Camera #0 Frame #261=================== 17-03-02 13:16:07.031 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262. 17-03-02 13:16:07.031 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262 17-03-02 13:16:07.031 -08 000000070 INF: ===================Camera #2 Frame #262=================== 17-03-02 13:16:07.047 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:07.057 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:07.174 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-03-02 13:16:07.174 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-03-02 13:16:07.174 -08 000000028 INF: ===================Camera #0 Frame #268=================== 17-03-02 13:16:07.184 -08 000000078 INF: Y Motor: Unshifted Position: 1227944 17-03-02 13:16:07.202 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-03-02 13:16:07.202 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-03-02 13:16:07.202 -08 000000070 INF: ===================Camera #2 Frame #269=================== 17-03-02 13:16:07.234 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:07.307 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:07.323 -08 000000095 INF: FPGA: Recv TDIYWAIT 17-03-02 13:16:07.323 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:07.325 -08 000000044 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:16:07.325 -08 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:16:07.326 -08 000000072 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:16:07.326 -08 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:16:07.326 -08 000000072 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:16:07.326 -08 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:16:07.326 -08 000000045 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:16:07.326 -08 000000045 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:16:07.326 -08 000000072 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:16:07.326 -08 000000072 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:16:07.327 -08 000000072 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:16:07.347 -08 000000028 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:16:07.347 -08 000000028 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:16:07.347 -08 000000028 INF: ===================Camera #0 Frame #272=================== 17-03-02 13:16:07.360 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:07.360 -08 000000028 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:16:07.361 -08 000000028 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:07.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:07.497 -08 000000078 INF: Y Motor: Unshifted Position: 1026231 17-03-02 13:16:07.524 -08 000000028 INF: Camera #0 ReleaseBuffer 17-03-02 13:16:07.524 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:16:07.524 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:16:07.524 -08 000000070 INF: ===================Camera #2 Frame #272=================== 17-03-02 13:16:07.524 -08 000000028 INF: ===================Camera TDI=================== 17-03-02 13:16:07.534 -08 000000070 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:16:07.534 -08 000000070 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:07.547 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:07.551 -08 000000028 INF: ====================================== 17-03-02 13:16:07.622 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:07.681 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:07.682 -08 000000078 INF: Y Motor: Unshifted Position: 992408 17-03-02 13:16:07.682 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:16:07.682 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:07.695 -08 000000075 INF: FPGA: Recv EX2MV 17-03-02 13:16:07.695 -08 000000075 INF: FPGA: Recv EX1MV 17-03-02 13:16:07.695 -08 000000072 INF: Excitation Filter 1: Moved 107 steps in 368.7794 ms 17-03-02 13:16:07.695 -08 000000045 INF: Excitation Filter 2: Moved 107 steps in 368.9474 ms 17-03-02 13:16:07.695 -08 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.1147 ms 17-03-02 13:16:07.695 -08 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.2941 ms 17-03-02 13:16:07.695 -08 000000072 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.0231 ms 17-03-02 13:16:07.695 -08 000000072 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.4367 ms 17-03-02 13:16:07.695 -08 000000045 INF: ====================================== 17-03-02 13:16:07.695 -08 000000072 INF: ====================================== 17-03-02 13:16:07.697 -08 000000044 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:07.698 -08 000000044 INF: ====================================== 17-03-02 13:16:07.733 -08 000000070 INF: Camera #2 ReleaseBuffer 17-03-02 13:16:07.733 -08 000000070 INF: ===================Camera TDI=================== 17-03-02 13:16:07.746 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:16:07.746 -08 000000078 INF: Y Motor: Moved to 14.9241 after 7863 ms 17-03-02 13:16:07.746 -08 000000078 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:16:07.768 -08 000000070 INF: ====================================== 17-03-02 13:16:07.769 -08 000000102 INF: ===================Camera TDI=================== 17-03-02 13:16:07.770 -08 000000102 INF: ====================================== 17-03-02 13:16:07.808 -08 000000078 INF: Y Motor: Recv v 4097\r 17-03-02 13:16:07.808 -08 000000078 INF: Y Motor: Status After move finished OK: 17-03-02 13:16:07.808 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:07.871 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:16:07.871 -08 000000078 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:07.871 -08 000000078 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:16:07.931 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:07.933 -08 000000078 INF: Y Motor: Recv v 134217728\r 17-03-02 13:16:07.933 -08 000000078 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:16:07.933 -08 000000078 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:16:07.933 -08 000000078 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:16:07.993 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:07.994 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:16:07.994 -08 000000078 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:16:07.994 -08 000000078 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:16:07.994 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:08.056 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:16:08.056 -08 000000078 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:16:08.056 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:08.121 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:16:08.121 -08 000000078 INF: ====================================== 17-03-02 13:16:08.122 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:08.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:08.124 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.124 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:16:08.134 -08 000000098 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:16:08.134 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:16:08.196 -08 000000053 INF: FPGA: Recv TDIYERD 1492408 17-03-02 13:16:08.196 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:16:08.243 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:08.257 -08 000000074 INF: FPGA: Recv ZADCR 35260 17-03-02 13:16:08.257 -08 000000042 INF: At scan end Y pos = 14.924 and Z pos = -0.135. Y moved -48.539 mm 17-03-02 13:16:08.257 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:16:08.307 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:08.321 -08 000000102 INF: FPGA: Recv TDIPULSES 139265 17-03-02 13:16:08.321 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-03-02 13:16:08.321 -08 000000042 INF: TDIScan finished after 11712.7647 ms 17-03-02 13:16:08.321 -08 000000042 INF: Image[0]: Y should trigger at 63.463 mm, 2nd row was at 64.372 mm (error = 0.909 mm) 17-03-02 13:16:08.321 -08 000000042 INF: Image[2]: Y should trigger at 63.463 mm, 2nd row was at 64.372 mm (error = 0.909 mm) 17-03-02 13:16:08.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.353 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.589 um 17-03-02 13:16:08.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.354 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:16:08.382 -08 000000119 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:16:08.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.383 -08 000000094 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:16:08.383 -08 000000097 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:16:08.383 -08 000000031 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:16:08.383 -08 000000115 INF: ===================Dither Clean Up Command=================== 17-03-02 13:16:08.384 -08 000000094 INF: ====================================== 17-03-02 13:16:08.384 -08 000000031 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:16:08.384 -08 000000031 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:16:08.384 -08 000000078 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:16:08.384 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:08.385 -08 000000078 INF: FPGA: Xmit ZSEL 0\n 17-03-02 13:16:08.385 -08 000000097 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:16:08.385 -08 000000097 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:16:08.388 -08 000000036 INF: ===================LFT:Extracting coords=================== 17-03-02 13:16:08.413 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:08.414 -08 000000036 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-03-02 13:16:08.415 -08 000000070 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:08.415 -08 000000107 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:08.415 -08 000000030 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:08.415 -08 000000072 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:08.415 -08 000000070 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:08.415 -08 000000107 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:08.415 -08 000000072 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:08.416 -08 000000030 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:08.432 -08 000000097 INF: Y Motor: Recv ok\r 17-03-02 13:16:08.432 -08 000000097 INF: ====================================== 17-03-02 13:16:08.445 -08 000000060 INF: FPGA: Recv ZSTEP 17-03-02 13:16:08.445 -08 000000060 INF: FPGA: Recv ZSEL 17-03-02 13:16:08.445 -08 000000078 INF: FPGA: Xmit ZDACW 41004\n 17-03-02 13:16:08.445 -08 000000031 INF: ====================================== 17-03-02 13:16:08.491 -08 000000107 INF: FC:B, C:162,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:08.491 -08 000000070 INF: FC:B, C:162,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:08.491 -08 000000072 INF: FC:B, C:162,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:08.492 -08 000000030 INF: FC:B, C:162,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:08.507 -08 000000104 INF: FPGA: Recv ZDACW 17-03-02 13:16:08.507 -08 000000078 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-03-02 13:16:08.507 -08 000000078 INF: FPGA: Xmit TDIBB 0\n 17-03-02 13:16:08.557 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:08.571 -08 000000065 INF: FPGA: Recv TDIBB 17-03-02 13:16:08.571 -08 000000078 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:16:08.572 -08 000000078 INF: ====================================== 17-03-02 13:16:08.619 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:08.643 -08 000000107 INF: LFT found best fwhm score 2.000259 in 152 ms 17-03-02 13:16:08.643 -08 000000107 INF: LFT found good score at index 777 with fwhm value 2.000259. Next cycle, cycle 163 starting Z position for top surface is at -0.159 mm FC:B, C:162,L:3,T 17-03-02 13:16:08.643 -08 000000072 INF: LFT found best fwhm score 2.203193 in 152 ms 17-03-02 13:16:08.643 -08 000000070 INF: LFT found best fwhm score 2.000307 in 152 ms 17-03-02 13:16:08.643 -08 000000070 INF: LFT found good score at index 5129 with fwhm value 2.000307. Next cycle, cycle 163 starting Z position for top surface is at -0.158 mm FC:B, C:162,L:3,T 17-03-02 13:16:08.643 -08 000000072 INF: LFT found good score at index 7857 with fwhm value 2.203193. Next cycle, cycle 163 starting Z position for top surface is at -0.157 mm FC:B, C:162,L:3,T 17-03-02 13:16:08.643 -08 000000107 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:08.643 -08 000000030 INF: LFT found best fwhm score 2.000058 in 151 ms 17-03-02 13:16:08.643 -08 000000030 INF: LFT found good score at index 7461 with fwhm value 2.000058. Next cycle, cycle 163 starting Z position for top surface is at -0.157 mm FC:B, C:162,L:3,T 17-03-02 13:16:08.644 -08 000000072 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:08.644 -08 000000070 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:08.644 -08 000000030 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:08.644 -08 000000107 INF: ====================================== 17-03-02 13:16:08.644 -08 000000072 INF: ====================================== 17-03-02 13:16:08.644 -08 000000070 INF: ====================================== 17-03-02 13:16:08.644 -08 000000030 INF: ====================================== 17-03-02 13:16:08.645 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:08.646 -08 000000036 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:162,L:3,T 17-03-02 13:16:08.646 -08 000000036 INF: ====================================== 17-03-02 13:16:08.647 -08 000000115 INF: ====================================== 17-03-02 13:16:08.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:16:08.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:16:08.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:16:08.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:16:08.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-03-02 13:16:08.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-03-02 13:16:08.652 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB, Waiting for image analysis=================== 17-03-02 13:16:08.652 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB=================== 17-03-02 13:16:08.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Waiting for image analysis=================== 17-03-02 13:16:08.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-03-02 13:16:08.675 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-03-02 13:16:08.676 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:16:08.676 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-03-02 13:16:08.676 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:08.676 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-03-02 13:16:08.676 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-03-02 13:16:08.677 -08 000000042 INF: Transformed XStagePosition from 75.26964 mm to 75.2413480617106 mm. 17-03-02 13:16:08.768 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1108 Request: {"Cycle":162,"Lane":3,"Tile":1108,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF214","HCSMMF181","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.785 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5720643562973 mm. 17-03-02 13:16:08.786 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3720643562973 mm. 17-03-02 13:16:08.786 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4628143562973 mm. 17-03-02 13:16:08.788 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:16:08.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:08.789 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -156.4 um, section = C_1 17-03-02 13:16:08.790 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:08.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:08.794 -08 000000083 INF: ===================Move X,Y=================== 17-03-02 13:16:08.795 -08 000000058 INF: ===================MoveEmissionFilters=================== 17-03-02 13:16:08.795 -08 000000083 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:16:08.796 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:08.796 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-03-02 13:16:08.796 -08 000000052 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:16:08.797 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:08.798 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-03-02 13:16:08.798 -08 000000119 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:16:08.799 -08 000000104 INF: ===================Move X Motor without settling=================== 17-03-02 13:16:08.799 -08 000000104 INF: X Motor: Xmit PR VM\n 17-03-02 13:16:08.800 -08 000000119 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:16:08.802 -08 000000078 INF: ===================Move Y Motor without settling=================== 17-03-02 13:16:08.802 -08 000000078 INF: Y Motor: Moving to 64.5721 mm @25.000 mm/sec, started at 14.9241 mm 17-03-02 13:16:08.803 -08 000000078 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:16:08.803 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:08.805 -08 000000129 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:08.805 -08 000000109 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:16:08.806 -08 000000107 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:16:08.806 -08 000000109 INF: ====================================== 17-03-02 13:16:08.806 -08 000000129 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:08.807 -08 000000107 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:16:08.808 -08 000000129 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:16:08.808 -08 000000028 INF: ===================Camera Arm TDI=================== 17-03-02 13:16:08.809 -08 000000129 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:08.809 -08 000000129 INF: FPGA: Xmit ZSEL 3\n 17-03-02 13:16:08.810 -08 000000028 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:08.811 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:16:08.811 -08 000000109 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:16:08.812 -08 000000028 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:16:08.812 -08 000000109 INF: ====================================== 17-03-02 13:16:08.813 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:16:08.815 -08 000000050 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:16:08.815 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:16:08.815 -08 000000050 INF: ====================================== 17-03-02 13:16:08.816 -08 000000119 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:16:08.817 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:16:08.818 -08 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:16:08.818 -08 000000050 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:16:08.818 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:16:08.818 -08 000000038 INF: ====================================== 17-03-02 13:16:08.818 -08 000000050 INF: ====================================== 17-03-02 13:16:08.819 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:16:08.820 -08 000000036 INF: ====================================== 17-03-02 13:16:08.820 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:16:08.820 -08 000000119 INF: ====================================== 17-03-02 13:16:08.822 -08 000000075 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:16:08.822 -08 000000075 INF: ====================================== 17-03-02 13:16:08.822 -08 000000101 INF: ====================================== 17-03-02 13:16:08.823 -08 000000107 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:16:08.826 -08 000000082 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:16:08.827 -08 000000082 INF: ====================================== 17-03-02 13:16:08.828 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:16:08.831 -08 000000109 INF: ====================================== 17-03-02 13:16:08.839 -08 000000107 INF: ====================================== 17-03-02 13:16:08.842 -08 000000058 INF: ====================================== 17-03-02 13:16:08.868 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1102 Request: {"Cycle":162,"Lane":3,"Tile":1102,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF225","HCSMMF193","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.869 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:08.871 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1103 Request: {"Cycle":162,"Lane":3,"Tile":1103,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF274","HCSMMF246","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.872 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1101 Request: {"Cycle":162,"Lane":3,"Tile":1101,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF268","HCSMMF245","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.874 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1105 Request: {"Cycle":162,"Lane":3,"Tile":1105,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF185","HCSMMF241","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.875 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1120 Request: {"Cycle":162,"Lane":3,"Tile":1120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF278","HCSMMF202","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.875 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1107 Request: {"Cycle":162,"Lane":3,"Tile":1107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF253","HCSMMF180","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.876 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1104 Request: {"Cycle":162,"Lane":3,"Tile":1104,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF204","HCSMMF237","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.877 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1110 Request: {"Cycle":162,"Lane":3,"Tile":1110,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF243","HCSMMF242","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.880 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1115 Request: {"Cycle":162,"Lane":3,"Tile":1115,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF184","HCSMMF284","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.885 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1118 Request: {"Cycle":162,"Lane":3,"Tile":1118,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF277","HCSMMF190","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.886 -08 000000126 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1116 Request: {"Cycle":162,"Lane":3,"Tile":1116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF179","HCSMMF250","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.887 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1111 Request: {"Cycle":162,"Lane":3,"Tile":1111,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF265","HCSMMF285","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.887 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1106 Request: {"Cycle":162,"Lane":3,"Tile":1106,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF182","HCSMMF283","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.888 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1119 Request: {"Cycle":162,"Lane":3,"Tile":1119,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF223","HCSMMF235","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.889 -08 000000115 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1112 Request: {"Cycle":162,"Lane":3,"Tile":1112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF279","HCSMMF236","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.890 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1113 Request: {"Cycle":162,"Lane":3,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF252","HCSMMF280","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.890 -08 000000131 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1109 Request: {"Cycle":162,"Lane":3,"Tile":1109,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF208","HCSMMF222","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.891 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1122 Request: {"Cycle":162,"Lane":3,"Tile":1122,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF266","HCSMMF281","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.892 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1117 Request: {"Cycle":162,"Lane":3,"Tile":1117,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF200","HCSMMF262","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.893 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1123 Request: {"Cycle":162,"Lane":3,"Tile":1123,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF178","HCSMMF269","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.894 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1127 Request: {"Cycle":162,"Lane":3,"Tile":1127,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF197","HCSMMF215","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.894 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1114 Request: {"Cycle":162,"Lane":3,"Tile":1114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF257","HCSMMF234","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.896 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1121 Request: {"Cycle":162,"Lane":3,"Tile":1121,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF201","HCSMMF220","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.897 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1128 Request: {"Cycle":162,"Lane":3,"Tile":1128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF209","HCSMMF227","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.898 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1125 Request: {"Cycle":162,"Lane":3,"Tile":1125,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF272","HCSMMF187","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.900 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1126 Request: {"Cycle":162,"Lane":3,"Tile":1126,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF177","HCSMMF263","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.901 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1124 Request: {"Cycle":162,"Lane":3,"Tile":1124,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF261","HCSMMF244","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:08.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:08.914 -08 000000075 INF: FPGA: Recv ZSEL 17-03-02 13:16:08.915 -08 000000129 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:08.915 -08 000000104 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:16:08.915 -08 000000104 INF: X Motor: Xmit PR VI\n 17-03-02 13:16:08.915 -08 000000129 INF: FPGA: Xmit TDIBB 1\n 17-03-02 13:16:08.915 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:16:08.915 -08 000000078 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:16:08.915 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:08.916 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:08.922 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-03-02 13:16:08.975 -08 000000027 INF: FPGA: Recv TDIBB 17-03-02 13:16:08.975 -08 000000129 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:08.977 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:16:08.977 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:08.977 -08 000000104 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:16:08.977 -08 000000104 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:16:08.977 -08 000000129 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:16:08.977 -08 000000104 INF: X Motor: Moving to 75.2413 mm @15.000 mm/sec, started at 74.1416 mm 17-03-02 13:16:08.977 -08 000000104 INF: X Motor: Xmit MA 6652\n 17-03-02 13:16:08.977 -08 000000129 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:08.979 -08 000000129 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-03-02 13:16:08.979 -08 000000129 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-03-02 13:16:08.979 -08 000000129 INF: FPGA: Xmit ZSTEP 1792263\n 17-03-02 13:16:09.015 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:09.015 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-03-02 13:16:09.037 -08 000000047 INF: FPGA: Recv ZSTEP 17-03-02 13:16:09.037 -08 000000129 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:09.039 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:16:09.039 -08 000000078 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:09.039 -08 000000104 INF: X Motor: Recv MA 6652\r\n> 17-03-02 13:16:09.039 -08 000000078 INF: Y Motor: Set target position to 5957206 encoder counts 17-03-02 13:16:09.039 -08 000000078 INF: Y Motor: Xmit s r0xca 5957206\r 17-03-02 13:16:09.039 -08 000000104 INF: X Motor: WaitUntilStopped 60073 17-03-02 13:16:09.039 -08 000000129 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:16:09.040 -08 000000129 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:09.041 -08 000000129 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:16:09.041 -08 000000129 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:16:09.041 -08 000000129 INF: Z Motor: Arming to move to -0.1164 mm 17-03-02 13:16:09.042 -08 000000129 INF: FPGA: Xmit ZYT 6437206 4\n 17-03-02 13:16:09.052 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:09.057 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-03-02 13:16:09.099 -08 000000126 INF: FPGA: Recv ZYT 17-03-02 13:16:09.099 -08 000000129 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492408 enc / 14.924 mm / ) = 6437206 enc / 64.372 mm 17-03-02 13:16:09.099 -08 000000129 INF: FPGA: Xmit ZARM 30519\n 17-03-02 13:16:09.101 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:16:09.101 -08 000000078 INF: Y Motor: Start the move command 17-03-02 13:16:09.101 -08 000000078 INF: Y Motor: Xmit t 1\r 17-03-02 13:16:09.163 -08 000000070 INF: FPGA: Recv ZARM 17-03-02 13:16:09.163 -08 000000129 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.1412 ms 17-03-02 13:16:09.163 -08 000000129 INF: Z Motor: ArmAbsStepped took 121.6737 ms 17-03-02 13:16:09.163 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:09.163 -08 000000129 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:09.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:09.165 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:16:09.165 -08 000000129 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:09.165 -08 000000078 INF: Y Motor: WaitUntilStopped 61986 17-03-02 13:16:09.165 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:09.166 -08 000000129 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:16:09.168 -08 000000129 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:09.169 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-03-02 13:16:09.169 -08 000000129 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:16:09.170 -08 000000129 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:09.171 -08 000000129 INF: ====================================== 17-03-02 13:16:09.226 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:09.273 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:09.282 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-03-02 13:16:09.294 -08 000000078 INF: Y Motor: Unshifted Position: 1076434 17-03-02 13:16:09.344 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:09.379 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:09.417 -08 000000028 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:16:09.418 -08 000000028 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:16:09.418 -08 000000028 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:16:09.433 -08 000000028 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:09.435 -08 000000028 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:16:09.464 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:09.476 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:09.538 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:09.602 -08 000000078 INF: Y Motor: Unshifted Position: 1784057 17-03-02 13:16:09.652 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:09.664 -08 000000104 INF: X Motor: Xmit PR ER\n 17-03-02 13:16:09.665 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-03-02 13:16:09.726 -08 000000104 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:16:09.726 -08 000000104 INF: X Motor: Moved to 75.2402 after 686 ms 17-03-02 13:16:09.726 -08 000000104 INF: ====================================== 17-03-02 13:16:09.775 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:09.788 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:09.851 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:09.913 -08 000000078 INF: Y Motor: Unshifted Position: 2567431 17-03-02 13:16:09.963 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:10.043 -08 000000028 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:16:10.043 -08 000000028 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:16:10.044 -08 000000028 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:16:10.060 -08 000000028 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:10.062 -08 000000028 INF: ===================Camera Arm TDI=================== 17-03-02 13:16:10.064 -08 000000028 INF: ====================================== 17-03-02 13:16:10.066 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:10.067 -08 000000052 INF: ====================================== 17-03-02 13:16:10.087 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:10.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:10.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:10.228 -08 000000078 INF: Y Motor: Unshifted Position: 3342382 17-03-02 13:16:10.278 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:10.400 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:10.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:10.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:10.538 -08 000000078 INF: Y Motor: Unshifted Position: 4127428 17-03-02 13:16:10.588 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:10.711 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:10.725 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:10.785 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:10.852 -08 000000078 INF: Y Motor: Unshifted Position: 4905719 17-03-02 13:16:10.902 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:11.023 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:11.035 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:11.097 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:11.097 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:11.097 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:11.098 -08 000000018 INF: WaitCommand(5000) start 17-03-02 13:16:11.098 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left=================== 17-03-02 13:16:11.164 -08 000000078 INF: Y Motor: Unshifted Position: 5682615 17-03-02 13:16:11.214 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:11.335 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:11.475 -08 000000078 INF: Y Motor: Unshifted Position: 5957208 17-03-02 13:16:11.475 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:16:11.475 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:11.537 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:16:11.537 -08 000000078 INF: Y Motor: Moved to 64.5721 after 2371 ms 17-03-02 13:16:11.537 -08 000000078 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:16:11.601 -08 000000078 INF: Y Motor: Recv v 4096\r 17-03-02 13:16:11.601 -08 000000078 INF: Y Motor: Status After move finished OK: 17-03-02 13:16:11.601 -08 000000078 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:11.662 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:16:11.662 -08 000000078 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:11.662 -08 000000078 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:16:11.723 -08 000000078 INF: Y Motor: Recv v 402653184\r 17-03-02 13:16:11.723 -08 000000078 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:16:11.723 -08 000000078 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:16:11.723 -08 000000078 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:16:11.785 -08 000000078 INF: Y Motor: Recv v 0\r 17-03-02 13:16:11.785 -08 000000078 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:16:11.785 -08 000000078 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:16:11.785 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:11.850 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:16:11.850 -08 000000078 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:16:11.850 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:11.912 -08 000000078 INF: Y Motor: Recv ok\r 17-03-02 13:16:11.912 -08 000000078 INF: ====================================== 17-03-02 13:16:11.913 -08 000000083 INF: ===================Move X,Y=================== 17-03-02 13:16:11.914 -08 000000083 INF: ====================================== 17-03-02 13:16:11.915 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:11.916 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:11.916 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-03-02 13:16:11.916 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-03-02 13:16:11.959 -08 000000044 INF: RunCopyService queue size at 3/2/2017 1:16:11 PM is 0 17-03-02 13:16:11.973 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:16:11.973 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-03-02 13:16:12.033 -08 000000111 INF: FPGA: Recv ZFREQCL 17-03-02 13:16:12.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:16:12.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:12.034 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:16:12.097 -08 000000057 INF: FPGA: Recv TDIYERD 6457207 17-03-02 13:16:12.098 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457207 counts (64.572 mm) 17-03-02 13:16:12.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:12.099 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:12.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:12.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left=================== 17-03-02 13:16:12.099 -08 000000047 INF: ===================TDI FPGA Arm=================== 17-03-02 13:16:12.099 -08 000000072 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:16:12.100 -08 000000072 INF: ====================================== 17-03-02 13:16:12.100 -08 000000047 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:12.101 -08 000000047 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:16:12.101 -08 000000047 INF: FPGA: Xmit TDIYPOS 6346281\n 17-03-02 13:16:12.160 -08 000000028 INF: FPGA: Recv TDIYPOS 17-03-02 13:16:12.160 -08 000000047 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:12.162 -08 000000047 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:16:12.162 -08 000000047 INF: FPGA: Xmit TDIYARM3 139264 6437206 1 1\n 17-03-02 13:16:12.222 -08 000000060 INF: FPGA: Recv TDIYARM3 17-03-02 13:16:12.222 -08 000000047 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:12.224 -08 000000047 INF: ===================TDI FPGA Arm=================== 17-03-02 13:16:12.225 -08 000000047 INF: ====================================== 17-03-02 13:16:12.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:12.227 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:12.227 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:12.227 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:12.228 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:12.229 -08 000000107 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:16:12.229 -08 000000107 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:16:12.229 -08 000000107 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:16:12.229 -08 000000107 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:16:12.229 -08 000000045 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:16:12.229 -08 000000107 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:16:12.229 -08 000000045 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:16:12.230 -08 000000045 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:16:12.230 -08 000000045 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:16:12.231 -08 000000045 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:16:12.597 -08 000000097 INF: FPGA: Recv EX2MV 17-03-02 13:16:12.597 -08 000000097 INF: FPGA: Recv EX1MV 17-03-02 13:16:12.597 -08 000000107 INF: Excitation Filter 2: Moved -107 steps in 367.642 ms 17-03-02 13:16:12.597 -08 000000107 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.8419 ms 17-03-02 13:16:12.597 -08 000000107 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.9441 ms 17-03-02 13:16:12.597 -08 000000045 INF: Excitation Filter 1: Moved -107 steps in 367.22 ms 17-03-02 13:16:12.597 -08 000000045 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.6936 ms 17-03-02 13:16:12.597 -08 000000045 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.8089 ms 17-03-02 13:16:12.597 -08 000000107 INF: ====================================== 17-03-02 13:16:12.598 -08 000000045 INF: ====================================== 17-03-02 13:16:12.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:12.601 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:12.602 -08 000000065 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:12.602 -08 000000097 INF: ===================Camera TDI=================== 17-03-02 13:16:12.602 -08 000000036 INF: ===================FPGA Z Wait=================== 17-03-02 13:16:12.603 -08 000000036 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:16:12.603 -08 000000031 INF: ===================Move Y Motor without settling=================== 17-03-02 13:16:12.603 -08 000000031 INF: Y Motor: Moving to 14.9237 mm @6.500 mm/sec, started at 64.5721 mm 17-03-02 13:16:12.603 -08 000000065 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:16:12.603 -08 000000031 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:16:12.603 -08 000000031 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:12.603 -08 000000097 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:16:12.604 -08 000000065 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:16:12.605 -08 000000131 INF: ===================Camera TDI=================== 17-03-02 13:16:12.606 -08 000000091 INF: ===================Camera TDI=================== 17-03-02 13:16:12.606 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:12.606 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:12.608 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:12.608 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:12.660 -08 000000031 INF: Y Motor: Recv ok\r 17-03-02 13:16:12.660 -08 000000031 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:16:12.660 -08 000000031 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:12.721 -08 000000031 INF: Y Motor: Recv ok\r 17-03-02 13:16:12.721 -08 000000031 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:12.757 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:12.757 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:12.758 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:12.758 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:12.784 -08 000000031 INF: Y Motor: Recv v 0\r 17-03-02 13:16:12.784 -08 000000031 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:12.784 -08 000000031 INF: Y Motor: Set target position to 992373 encoder counts 17-03-02 13:16:12.784 -08 000000031 INF: Y Motor: Xmit s r0xca 992373\r 17-03-02 13:16:12.846 -08 000000031 INF: Y Motor: Recv ok\r 17-03-02 13:16:12.846 -08 000000031 INF: Y Motor: Start the move command 17-03-02 13:16:12.846 -08 000000031 INF: Y Motor: Xmit t 1\r 17-03-02 13:16:12.907 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:12.907 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:12.908 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:12.908 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:12.911 -08 000000031 INF: Y Motor: Recv ok\r 17-03-02 13:16:12.911 -08 000000031 INF: Y Motor: WaitUntilStopped 67638 17-03-02 13:16:12.911 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:12.971 -08 000000102 INF: FPGA: Recv ZWAIT 17-03-02 13:16:12.972 -08 000000036 INF: ====================================== 17-03-02 13:16:13.035 -08 000000031 INF: Y Motor: Unshifted Position: 5893618 17-03-02 13:16:13.057 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:16:13.057 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:16:13.057 -08 000000131 INF: ===================Camera #0 Frame #5=================== 17-03-02 13:16:13.058 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:16:13.058 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:16:13.058 -08 000000091 INF: ===================Camera #2 Frame #5=================== 17-03-02 13:16:13.085 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:13.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:13.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left=================== 17-03-02 13:16:13.209 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:13.222 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-03-02 13:16:13.222 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-03-02 13:16:13.222 -08 000000131 INF: ===================Camera #0 Frame #11=================== 17-03-02 13:16:13.224 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-03-02 13:16:13.224 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-03-02 13:16:13.224 -08 000000091 INF: ===================Camera #2 Frame #11=================== 17-03-02 13:16:13.345 -08 000000031 INF: Y Motor: Unshifted Position: 5692126 17-03-02 13:16:13.390 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:16:13.390 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:16:13.390 -08 000000131 INF: ===================Camera #0 Frame #17=================== 17-03-02 13:16:13.393 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:16:13.393 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:16:13.393 -08 000000091 INF: ===================Camera #2 Frame #17=================== 17-03-02 13:16:13.395 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:13.522 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:13.568 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24. 17-03-02 13:16:13.568 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24 17-03-02 13:16:13.568 -08 000000131 INF: ===================Camera #0 Frame #24=================== 17-03-02 13:16:13.572 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24. 17-03-02 13:16:13.572 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24 17-03-02 13:16:13.572 -08 000000091 INF: ===================Camera #2 Frame #24=================== 17-03-02 13:16:13.658 -08 000000031 INF: Y Motor: Unshifted Position: 5488458 17-03-02 13:16:13.708 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:13.739 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-03-02 13:16:13.739 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-03-02 13:16:13.739 -08 000000131 INF: ===================Camera #0 Frame #30=================== 17-03-02 13:16:13.744 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-03-02 13:16:13.744 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-03-02 13:16:13.744 -08 000000091 INF: ===================Camera #2 Frame #30=================== 17-03-02 13:16:13.832 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:13.908 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-03-02 13:16:13.908 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-03-02 13:16:13.908 -08 000000131 INF: ===================Camera #0 Frame #36=================== 17-03-02 13:16:13.921 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37. 17-03-02 13:16:13.921 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37 17-03-02 13:16:13.921 -08 000000091 INF: ===================Camera #2 Frame #37=================== 17-03-02 13:16:13.971 -08 000000031 INF: Y Motor: Unshifted Position: 5285008 17-03-02 13:16:14.021 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:14.077 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:16:14.077 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:16:14.077 -08 000000131 INF: ===================Camera #0 Frame #42=================== 17-03-02 13:16:14.096 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43. 17-03-02 13:16:14.096 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43 17-03-02 13:16:14.096 -08 000000091 INF: ===================Camera #2 Frame #43=================== 17-03-02 13:16:14.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:14.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left=================== 17-03-02 13:16:14.144 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:14.251 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-03-02 13:16:14.251 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-03-02 13:16:14.251 -08 000000131 INF: ===================Camera #0 Frame #49=================== 17-03-02 13:16:14.266 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-03-02 13:16:14.266 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-03-02 13:16:14.266 -08 000000091 INF: ===================Camera #2 Frame #49=================== 17-03-02 13:16:14.283 -08 000000031 INF: Y Motor: Unshifted Position: 5081986 17-03-02 13:16:14.333 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:14.423 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-03-02 13:16:14.423 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-03-02 13:16:14.423 -08 000000131 INF: ===================Camera #0 Frame #55=================== 17-03-02 13:16:14.436 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56. 17-03-02 13:16:14.436 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56 17-03-02 13:16:14.436 -08 000000091 INF: ===================Camera #2 Frame #56=================== 17-03-02 13:16:14.457 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:14.591 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:16:14.591 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:16:14.591 -08 000000131 INF: ===================Camera #0 Frame #61=================== 17-03-02 13:16:14.593 -08 000000031 INF: Y Motor: Unshifted Position: 4880484 17-03-02 13:16:14.608 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62. 17-03-02 13:16:14.608 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62 17-03-02 13:16:14.608 -08 000000091 INF: ===================Camera #2 Frame #62=================== 17-03-02 13:16:14.643 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:14.760 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:16:14.760 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:16:14.760 -08 000000131 INF: ===================Camera #0 Frame #67=================== 17-03-02 13:16:14.770 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:14.778 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68. 17-03-02 13:16:14.778 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68 17-03-02 13:16:14.778 -08 000000091 INF: ===================Camera #2 Frame #68=================== 17-03-02 13:16:14.908 -08 000000031 INF: Y Motor: Unshifted Position: 4676819 17-03-02 13:16:14.929 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-03-02 13:16:14.929 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-03-02 13:16:14.929 -08 000000131 INF: ===================Camera #0 Frame #74=================== 17-03-02 13:16:14.947 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-03-02 13:16:14.947 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-03-02 13:16:14.947 -08 000000091 INF: ===================Camera #2 Frame #74=================== 17-03-02 13:16:14.958 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:15.083 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:15.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:15.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left=================== 17-03-02 13:16:15.101 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:16:15.101 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:16:15.101 -08 000000131 INF: ===================Camera #0 Frame #80=================== 17-03-02 13:16:15.117 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81. 17-03-02 13:16:15.117 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81 17-03-02 13:16:15.117 -08 000000091 INF: ===================Camera #2 Frame #81=================== 17-03-02 13:16:15.218 -08 000000031 INF: Y Motor: Unshifted Position: 4474444 17-03-02 13:16:15.268 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:15.270 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:16:15.270 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:16:15.270 -08 000000131 INF: ===================Camera #0 Frame #86=================== 17-03-02 13:16:15.290 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87. 17-03-02 13:16:15.290 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87 17-03-02 13:16:15.290 -08 000000091 INF: ===================Camera #2 Frame #87=================== 17-03-02 13:16:15.394 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:15.438 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:16:15.438 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:16:15.438 -08 000000131 INF: ===================Camera #0 Frame #92=================== 17-03-02 13:16:15.459 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93. 17-03-02 13:16:15.459 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93 17-03-02 13:16:15.459 -08 000000091 INF: ===================Camera #2 Frame #93=================== 17-03-02 13:16:15.532 -08 000000031 INF: Y Motor: Unshifted Position: 4270996 17-03-02 13:16:15.582 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:15.606 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-03-02 13:16:15.606 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-03-02 13:16:15.606 -08 000000131 INF: ===================Camera #0 Frame #99=================== 17-03-02 13:16:15.628 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-03-02 13:16:15.628 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-03-02 13:16:15.628 -08 000000091 INF: ===================Camera #2 Frame #99=================== 17-03-02 13:16:15.704 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:15.777 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-03-02 13:16:15.777 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-03-02 13:16:15.777 -08 000000131 INF: ===================Camera #0 Frame #105=================== 17-03-02 13:16:15.797 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106. 17-03-02 13:16:15.797 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106 17-03-02 13:16:15.797 -08 000000091 INF: ===================Camera #2 Frame #106=================== 17-03-02 13:16:15.843 -08 000000031 INF: Y Motor: Unshifted Position: 4067542 17-03-02 13:16:15.893 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:15.946 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:16:15.946 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:16:15.946 -08 000000131 INF: ===================Camera #0 Frame #111=================== 17-03-02 13:16:15.969 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112. 17-03-02 13:16:15.969 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112 17-03-02 13:16:15.969 -08 000000091 INF: ===================Camera #2 Frame #112=================== 17-03-02 13:16:16.017 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:16.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:16.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:16.099 -08 000000018 INF: WaitCommand(5000) end 17-03-02 13:16:16.099 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:16.114 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-03-02 13:16:16.114 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-03-02 13:16:16.114 -08 000000131 INF: ===================Camera #0 Frame #117=================== 17-03-02 13:16:16.138 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118. 17-03-02 13:16:16.138 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118 17-03-02 13:16:16.138 -08 000000091 INF: ===================Camera #2 Frame #118=================== 17-03-02 13:16:16.153 -08 000000031 INF: Y Motor: Unshifted Position: 3865825 17-03-02 13:16:16.198 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:16:16.203 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:16.279 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 17-03-02 13:16:16.279 -08 000000018 INF: Current Position of Pump is: 7680 17-03-02 13:16:16.282 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-03-02 13:16:16.282 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-03-02 13:16:16.282 -08 000000131 INF: ===================Camera #0 Frame #123=================== 17-03-02 13:16:16.307 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-03-02 13:16:16.307 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-03-02 13:16:16.307 -08 000000091 INF: ===================Camera #2 Frame #124=================== 17-03-02 13:16:16.330 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:16.379 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:16:16.450 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:16:16.450 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:16:16.450 -08 000000131 INF: ===================Camera #0 Frame #130=================== 17-03-02 13:16:16.615 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-03-02 13:16:16.616 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-03-02 13:16:16.617 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 17-03-02 13:16:16.617 -08 000000018 INF: Current Position of Pump is: 7680 17-03-02 13:16:16.617 -08 000000091 INF: ===================Camera #2 Frame #136=================== 17-03-02 13:16:16.617 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC=================== 17-03-02 13:16:16.626 -08 000000031 INF: Y Motor: Unshifted Position: 3662158 17-03-02 13:16:16.676 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:16.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD7680R\r 17-03-02 13:16:16.780 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:16.781 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-03-02 13:16:16.781 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-03-02 13:16:16.781 -08 000000131 INF: ===================Camera #0 Frame #142=================== 17-03-02 13:16:16.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:16.805 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-03-02 13:16:16.805 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-03-02 13:16:16.805 -08 000000091 INF: ===================Camera #2 Frame #143=================== 17-03-02 13:16:16.894 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:16.918 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:16.919 -08 000000031 INF: Y Motor: Unshifted Position: 3367721 17-03-02 13:16:16.967 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-03-02 13:16:16.967 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-03-02 13:16:16.967 -08 000000131 INF: ===================Camera #0 Frame #149=================== 17-03-02 13:16:16.969 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:16.977 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-03-02 13:16:16.977 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-03-02 13:16:16.977 -08 000000091 INF: ===================Camera #2 Frame #149=================== 17-03-02 13:16:17.093 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:17.138 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:16:17.138 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:16:17.138 -08 000000131 INF: ===================Camera #0 Frame #155=================== 17-03-02 13:16:17.146 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:16:17.146 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:16:17.146 -08 000000091 INF: ===================Camera #2 Frame #155=================== 17-03-02 13:16:17.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:17.231 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:17.232 -08 000000031 INF: Y Motor: Unshifted Position: 3165998 17-03-02 13:16:17.282 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:17.311 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-03-02 13:16:17.311 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-03-02 13:16:17.311 -08 000000131 INF: ===================Camera #0 Frame #161=================== 17-03-02 13:16:17.317 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-03-02 13:16:17.317 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-03-02 13:16:17.317 -08 000000091 INF: ===================Camera #2 Frame #162=================== 17-03-02 13:16:17.406 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:17.481 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:17.482 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:16:17.482 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:16:17.482 -08 000000131 INF: ===================Camera #0 Frame #168=================== 17-03-02 13:16:17.491 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:16:17.491 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:16:17.491 -08 000000091 INF: ===================Camera #2 Frame #168=================== 17-03-02 13:16:17.541 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:17.544 -08 000000031 INF: Y Motor: Unshifted Position: 2962544 17-03-02 13:16:17.594 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:17.656 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:16:17.656 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:16:17.656 -08 000000131 INF: ===================Camera #0 Frame #174=================== 17-03-02 13:16:17.662 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:16:17.662 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:16:17.662 -08 000000091 INF: ===================Camera #2 Frame #174=================== 17-03-02 13:16:17.716 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:17.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:17.827 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-03-02 13:16:17.827 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-03-02 13:16:17.827 -08 000000131 INF: ===================Camera #0 Frame #180=================== 17-03-02 13:16:17.832 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-03-02 13:16:17.832 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-03-02 13:16:17.832 -08 000000091 INF: ===================Camera #2 Frame #181=================== 17-03-02 13:16:17.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:17.855 -08 000000031 INF: Y Motor: Unshifted Position: 2757572 17-03-02 13:16:17.905 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:17.999 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:16:17.999 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:16:17.999 -08 000000131 INF: ===================Camera #0 Frame #187=================== 17-03-02 13:16:18.006 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:16:18.006 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:16:18.006 -08 000000091 INF: ===================Camera #2 Frame #187=================== 17-03-02 13:16:18.029 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:18.104 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:18.167 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:18.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)=================== 17-03-02 13:16:18.167 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-02 13:16:18.168 -08 000000031 INF: Y Motor: Unshifted Position: 2557153 17-03-02 13:16:18.174 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:16:18.174 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:16:18.174 -08 000000131 INF: ===================Camera #0 Frame #193=================== 17-03-02 13:16:18.176 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:16:18.176 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:16:18.176 -08 000000091 INF: ===================Camera #2 Frame #193=================== 17-03-02 13:16:18.218 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:18.342 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:18.345 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-03-02 13:16:18.345 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-03-02 13:16:18.345 -08 000000131 INF: ===================Camera #0 Frame #199=================== 17-03-02 13:16:18.347 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-03-02 13:16:18.347 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-03-02 13:16:18.347 -08 000000091 INF: ===================Camera #2 Frame #200=================== 17-03-02 13:16:18.478 -08 000000031 INF: Y Motor: Unshifted Position: 2353710 17-03-02 13:16:18.516 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-03-02 13:16:18.516 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-03-02 13:16:18.516 -08 000000131 INF: ===================Camera #0 Frame #206=================== 17-03-02 13:16:18.521 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-03-02 13:16:18.521 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-03-02 13:16:18.521 -08 000000091 INF: ===================Camera #2 Frame #206=================== 17-03-02 13:16:18.528 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:18.653 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:18.691 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-03-02 13:16:18.691 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-03-02 13:16:18.691 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-03-02 13:16:18.691 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-03-02 13:16:18.691 -08 000000091 INF: ===================Camera #2 Frame #212=================== 17-03-02 13:16:18.691 -08 000000131 INF: ===================Camera #0 Frame #212=================== 17-03-02 13:16:18.791 -08 000000031 INF: Y Motor: Unshifted Position: 2150261 17-03-02 13:16:18.841 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:18.862 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-03-02 13:16:18.862 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-03-02 13:16:18.862 -08 000000091 INF: ===================Camera #2 Frame #218=================== 17-03-02 13:16:18.863 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-03-02 13:16:18.863 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-03-02 13:16:18.863 -08 000000131 INF: ===================Camera #0 Frame #218=================== 17-03-02 13:16:18.965 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:19.033 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-03-02 13:16:19.033 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-03-02 13:16:19.033 -08 000000091 INF: ===================Camera #2 Frame #225=================== 17-03-02 13:16:19.034 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-03-02 13:16:19.034 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-03-02 13:16:19.034 -08 000000131 INF: ===================Camera #0 Frame #225=================== 17-03-02 13:16:19.104 -08 000000031 INF: Y Motor: Unshifted Position: 1948541 17-03-02 13:16:19.154 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:19.205 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-03-02 13:16:19.205 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-03-02 13:16:19.205 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-03-02 13:16:19.205 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-03-02 13:16:19.205 -08 000000131 INF: ===================Camera #0 Frame #231=================== 17-03-02 13:16:19.205 -08 000000091 INF: ===================Camera #2 Frame #231=================== 17-03-02 13:16:19.267 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-03-02 13:16:19.276 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:19.290 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:19.376 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237. 17-03-02 13:16:19.376 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237 17-03-02 13:16:19.376 -08 000000091 INF: ===================Camera #2 Frame #237=================== 17-03-02 13:16:19.377 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237. 17-03-02 13:16:19.377 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237 17-03-02 13:16:19.377 -08 000000131 INF: ===================Camera #0 Frame #237=================== 17-03-02 13:16:19.390 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:19.415 -08 000000031 INF: Y Motor: Unshifted Position: 1744449 17-03-02 13:16:19.465 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:19.476 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:19.547 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-03-02 13:16:19.547 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-03-02 13:16:19.547 -08 000000091 INF: ===================Camera #2 Frame #244=================== 17-03-02 13:16:19.548 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-03-02 13:16:19.548 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-03-02 13:16:19.548 -08 000000131 INF: ===================Camera #0 Frame #244=================== 17-03-02 13:16:19.589 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:19.721 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-03-02 13:16:19.721 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-03-02 13:16:19.721 -08 000000091 INF: ===================Camera #2 Frame #250=================== 17-03-02 13:16:19.723 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-03-02 13:16:19.723 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-03-02 13:16:19.723 -08 000000131 INF: ===================Camera #0 Frame #250=================== 17-03-02 13:16:19.725 -08 000000031 INF: Y Motor: Unshifted Position: 1542728 17-03-02 13:16:19.726 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:19.775 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:19.790 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:19.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:19.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 17-03-02 13:16:19.890 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256. 17-03-02 13:16:19.890 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256 17-03-02 13:16:19.890 -08 000000091 INF: ===================Camera #2 Frame #256=================== 17-03-02 13:16:19.891 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256. 17-03-02 13:16:19.891 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256 17-03-02 13:16:19.891 -08 000000131 INF: ===================Camera #0 Frame #256=================== 17-03-02 13:16:19.900 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:20.039 -08 000000031 INF: Y Motor: Unshifted Position: 1338421 17-03-02 13:16:20.061 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-03-02 13:16:20.061 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-03-02 13:16:20.061 -08 000000091 INF: ===================Camera #2 Frame #263=================== 17-03-02 13:16:20.062 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-03-02 13:16:20.062 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-03-02 13:16:20.062 -08 000000131 INF: ===================Camera #0 Frame #263=================== 17-03-02 13:16:20.089 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:20.160 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:20.160 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:20.161 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Buffer Wash=================== 17-03-02 13:16:20.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle=================== 17-03-02 13:16:20.163 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:20.163 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:20.163 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:20.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-03-02 13:16:20.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-03-02 13:16:20.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°=================== 17-03-02 13:16:20.213 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:20.233 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-03-02 13:16:20.233 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-03-02 13:16:20.233 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-03-02 13:16:20.233 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-03-02 13:16:20.233 -08 000000131 INF: ===================Camera #0 Frame #269=================== 17-03-02 13:16:20.233 -08 000000091 INF: ===================Camera #2 Frame #269=================== 17-03-02 13:16:20.347 -08 000000100 INF: FPGA: Recv TDIYWAIT 17-03-02 13:16:20.347 -08 000000065 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:20.349 -08 000000031 INF: Y Motor: Unshifted Position: 1136924 17-03-02 13:16:20.349 -08 000000065 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:16:20.350 -08 000000056 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:16:20.350 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:16:20.350 -08 000000056 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:16:20.350 -08 000000056 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:16:20.350 -08 000000056 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:16:20.350 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:16:20.350 -08 000000056 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:16:20.350 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:16:20.350 -08 000000078 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:16:20.351 -08 000000078 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:16:20.399 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:20.404 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:16:20.404 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:16:20.404 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:16:20.404 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:16:20.404 -08 000000131 INF: ===================Camera #0 Frame #272=================== 17-03-02 13:16:20.404 -08 000000091 INF: ===================Camera #2 Frame #272=================== 17-03-02 13:16:20.413 -08 000000131 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:16:20.413 -08 000000091 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:16:20.414 -08 000000131 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:20.417 -08 000000091 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:20.526 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:20.550 -08 000000131 INF: Camera #0 ReleaseBuffer 17-03-02 13:16:20.550 -08 000000131 INF: ===================Camera TDI=================== 17-03-02 13:16:20.581 -08 000000131 INF: ====================================== 17-03-02 13:16:20.663 -08 000000031 INF: Y Motor: Unshifted Position: 992374 17-03-02 13:16:20.713 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:20.721 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-03-02 13:16:20.722 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-03-02 13:16:20.722 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-03-02 13:16:20.723 -08 000000091 INF: Camera #2 ReleaseBuffer 17-03-02 13:16:20.723 -08 000000057 INF: FPGA: Recv EX1MV 17-03-02 13:16:20.723 -08 000000057 INF: FPGA: Recv EX2MV 17-03-02 13:16:20.723 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-03-02 13:16:20.723 -08 000000056 INF: Excitation Filter 1: Moved 107 steps in 373.1756 ms 17-03-02 13:16:20.723 -08 000000056 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.3752 ms 17-03-02 13:16:20.723 -08 000000056 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.4456 ms 17-03-02 13:16:20.723 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 372.9362 ms 17-03-02 13:16:20.723 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.3676 ms 17-03-02 13:16:20.723 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.4391 ms 17-03-02 13:16:20.723 -08 000000091 INF: ===================Camera TDI=================== 17-03-02 13:16:20.723 -08 000000056 INF: ====================================== 17-03-02 13:16:20.724 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:20.724 -08 000000078 INF: ====================================== 17-03-02 13:16:20.724 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:20.724 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:20.725 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:20.725 -08 000000065 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:20.726 -08 000000065 INF: ====================================== 17-03-02 13:16:20.756 -08 000000091 INF: ====================================== 17-03-02 13:16:20.758 -08 000000097 INF: ===================Camera TDI=================== 17-03-02 13:16:20.759 -08 000000097 INF: ====================================== 17-03-02 13:16:20.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:20.786 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)=================== 17-03-02 13:16:20.786 -08 000000018 INF: Valve A1: Go to position 1 17-03-02 13:16:20.786 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:16:20.848 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 8\r 17-03-02 13:16:20.848 -08 000000018 INF: Valve A1: 18.220 seconds since last move, > 10.000 seconds required between moves 17-03-02 13:16:20.848 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 8 to 1 17-03-02 13:16:20.848 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW1\r 17-03-02 13:16:20.848 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-03-02 13:16:20.848 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-03-02 13:16:20.849 -08 000000031 INF: Y Motor: Unshifted Position: 992372 17-03-02 13:16:20.849 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:16:20.849 -08 000000031 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:20.911 -08 000000031 INF: Y Motor: Recv v 0\r 17-03-02 13:16:20.911 -08 000000031 INF: Y Motor: Moved to 14.9237 after 8000 ms 17-03-02 13:16:20.911 -08 000000031 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:16:20.973 -08 000000031 INF: Y Motor: Recv v 4097\r 17-03-02 13:16:20.973 -08 000000031 INF: Y Motor: Status After move finished OK: 17-03-02 13:16:20.973 -08 000000031 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:21.039 -08 000000031 INF: Y Motor: Recv v 0\r 17-03-02 13:16:21.039 -08 000000031 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:21.039 -08 000000031 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:16:21.100 -08 000000031 INF: Y Motor: Recv v 134217728\r 17-03-02 13:16:21.100 -08 000000031 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:16:21.100 -08 000000031 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:16:21.100 -08 000000031 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:16:21.163 -08 000000031 INF: Y Motor: Recv v 0\r 17-03-02 13:16:21.163 -08 000000031 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:16:21.163 -08 000000031 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:16:21.163 -08 000000031 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:21.223 -08 000000031 INF: Y Motor: Recv ok\r 17-03-02 13:16:21.223 -08 000000031 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:16:21.223 -08 000000031 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:21.284 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 1\r 17-03-02 13:16:21.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:21.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 17-03-02 13:16:21.285 -08 000000031 INF: Y Motor: Recv ok\r 17-03-02 13:16:21.285 -08 000000031 INF: ====================================== 17-03-02 13:16:21.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:21.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:21.288 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.288 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:16:21.349 -08 000000097 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:16:21.349 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:16:21.412 -08 000000071 INF: FPGA: Recv TDIYERD 1492374 17-03-02 13:16:21.412 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:16:21.474 -08 000000072 INF: FPGA: Recv ZADCR 35352 17-03-02 13:16:21.474 -08 000000042 INF: At scan end Y pos = 14.924 and Z pos = -0.135. Y moved -48.539 mm 17-03-02 13:16:21.474 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:16:21.537 -08 000000029 INF: FPGA: Recv TDIPULSES 139265 17-03-02 13:16:21.537 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-03-02 13:16:21.537 -08 000000042 INF: TDIScan finished after 12858.8439 ms 17-03-02 13:16:21.537 -08 000000042 INF: Image[0]: Y should trigger at 63.463 mm, 2nd row was at 64.372 mm (error = 0.909 mm) 17-03-02 13:16:21.537 -08 000000042 INF: Image[2]: Y should trigger at 63.463 mm, 2nd row was at 64.372 mm (error = 0.909 mm) 17-03-02 13:16:21.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.570 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.669 um 17-03-02 13:16:21.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.571 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:16:21.598 -08 000000075 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:16:21.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.599 -08 000000030 INF: ===================Dither Clean Up Command=================== 17-03-02 13:16:21.599 -08 000000028 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:16:21.600 -08 000000047 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:16:21.600 -08 000000082 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:16:21.600 -08 000000082 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:16:21.600 -08 000000082 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:16:21.600 -08 000000028 INF: ====================================== 17-03-02 13:16:21.600 -08 000000047 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:16:21.600 -08 000000047 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:16:21.600 -08 000000027 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:16:21.600 -08 000000100 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:21.601 -08 000000027 INF: FPGA: Xmit ZSEL 0\n 17-03-02 13:16:21.604 -08 000000100 INF: ===================LFT:Extracting coords=================== 17-03-02 13:16:21.629 -08 000000100 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:21.630 -08 000000100 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-03-02 13:16:21.631 -08 000000074 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:21.631 -08 000000071 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:21.631 -08 000000033 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:21.631 -08 000000087 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:21.631 -08 000000074 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:21.631 -08 000000033 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:21.632 -08 000000087 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:21.632 -08 000000071 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:21.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:21.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:21.658 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:21.660 -08 000000111 INF: FPGA: Recv ZSTEP 17-03-02 13:16:21.660 -08 000000111 INF: FPGA: Recv ZSEL 17-03-02 13:16:21.660 -08 000000027 INF: FPGA: Xmit ZDACW 41004\n 17-03-02 13:16:21.660 -08 000000082 INF: ====================================== 17-03-02 13:16:21.663 -08 000000047 INF: Y Motor: Recv ok\r 17-03-02 13:16:21.663 -08 000000047 INF: ====================================== 17-03-02 13:16:21.705 -08 000000033 INF: FC:B, C:162,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:21.706 -08 000000074 INF: FC:B, C:162,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:21.706 -08 000000087 INF: FC:B, C:162,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:21.706 -08 000000071 INF: FC:B, C:162,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:21.722 -08 000000066 INF: FPGA: Recv ZDACW 17-03-02 13:16:21.723 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:21.723 -08 000000027 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-03-02 13:16:21.723 -08 000000027 INF: FPGA: Xmit TDIBB 0\n 17-03-02 13:16:21.730 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000 17-03-02 13:16:21.787 -08 000000073 INF: FPGA: Recv TDIBB 17-03-02 13:16:21.787 -08 000000027 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:16:21.788 -08 000000027 INF: ====================================== 17-03-02 13:16:21.823 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:16:21.857 -08 000000033 INF: LFT found best fwhm score 2.000307 in 151 ms 17-03-02 13:16:21.857 -08 000000033 INF: LFT found good score at index 2533 with fwhm value 2.000307. Next cycle, cycle 163 starting Z position for top surface is at -0.158 mm FC:B, C:162,L:3,T 17-03-02 13:16:21.857 -08 000000074 INF: LFT found best fwhm score 2.009449 in 151 ms 17-03-02 13:16:21.857 -08 000000074 INF: LFT found good score at index 5233 with fwhm value 2.009449. Next cycle, cycle 163 starting Z position for top surface is at -0.158 mm FC:B, C:162,L:3,T 17-03-02 13:16:21.857 -08 000000033 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:21.857 -08 000000074 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:21.857 -08 000000087 INF: LFT found best fwhm score 2.193743 in 151 ms 17-03-02 13:16:21.857 -08 000000087 INF: LFT found good score at index 7269 with fwhm value 2.193743. Next cycle, cycle 163 starting Z position for top surface is at -0.157 mm FC:B, C:162,L:3,T 17-03-02 13:16:21.857 -08 000000033 INF: ====================================== 17-03-02 13:16:21.857 -08 000000071 INF: LFT found best fwhm score 2.000034 in 151 ms 17-03-02 13:16:21.857 -08 000000074 INF: ====================================== 17-03-02 13:16:21.857 -08 000000071 INF: LFT found good score at index 1725 with fwhm value 2.000034. Next cycle, cycle 163 starting Z position for top surface is at -0.158 mm FC:B, C:162,L:3,T 17-03-02 13:16:21.857 -08 000000087 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:21.858 -08 000000071 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:21.858 -08 000000087 INF: ====================================== 17-03-02 13:16:21.858 -08 000000071 INF: ====================================== 17-03-02 13:16:21.859 -08 000000100 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:21.860 -08 000000100 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:162,L:3,T 17-03-02 13:16:21.860 -08 000000100 INF: ====================================== 17-03-02 13:16:21.861 -08 000000030 INF: ====================================== 17-03-02 13:16:21.862 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:16:21.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:16:21.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.864 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:16:21.864 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.864 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:16:21.864 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:21.864 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-03-02 13:16:21.864 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-03-02 13:16:21.866 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis=================== 17-03-02 13:16:21.866 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:21.866 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Waiting for image analysis=================== 17-03-02 13:16:21.866 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-03-02 13:16:21.889 -08 000000042 INF: Waited 24 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-03-02 13:16:21.889 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:16:21.889 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:16:21.889 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:21.890 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-03-02 13:16:21.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 3=================== 17-03-02 13:16:21.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface=================== 17-03-02 13:16:21.937 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1201 Request: {"Cycle":162,"Lane":3,"Tile":1201,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF177","HCSMMF244","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:21.965 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-03-02 13:16:21.965 -08 000000018 INF: Current Position of Pump is: 0 17-03-02 13:16:22.120 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-03-02 13:16:22.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:22.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:22.144 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:16:22.144 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:16:22.154 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1202 Request: {"Cycle":162,"Lane":3,"Tile":1202,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF199","HCSMMF276","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.155 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1203 Request: {"Cycle":162,"Lane":3,"Tile":1203,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF216","HCSMMF224","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.156 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1205 Request: {"Cycle":162,"Lane":3,"Tile":1205,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF202","HCSMMF282","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.156 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1211 Request: {"Cycle":162,"Lane":3,"Tile":1211,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF281","HCSMMF222","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.157 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1214 Request: {"Cycle":162,"Lane":3,"Tile":1214,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF254","HCSMMF192","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.158 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1204 Request: {"Cycle":162,"Lane":3,"Tile":1204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF227","HCSMMF265","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.159 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1209 Request: {"Cycle":162,"Lane":3,"Tile":1209,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF252","HCSMMF225","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.159 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1216 Request: {"Cycle":162,"Lane":3,"Tile":1216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF185","HCSMMF275","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.160 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1226 Request: {"Cycle":162,"Lane":3,"Tile":1226,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF257","HCSMMF250","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.161 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1210 Request: {"Cycle":162,"Lane":3,"Tile":1210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF207","HCSMMF232","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.162 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1218 Request: {"Cycle":162,"Lane":3,"Tile":1218,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF236","HCSMMF235","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.163 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1206 Request: {"Cycle":162,"Lane":3,"Tile":1206,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF217","HCSMMF205","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.164 -08 000000119 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1223 Request: {"Cycle":162,"Lane":3,"Tile":1223,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF183","HCSMMF260","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.165 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1222 Request: {"Cycle":162,"Lane":3,"Tile":1222,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF201","HCSMMF246","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.166 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1212 Request: {"Cycle":162,"Lane":3,"Tile":1212,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF181","HCSMMF248","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.166 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1224 Request: {"Cycle":162,"Lane":3,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF267","HCSMMF197","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.167 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1215 Request: {"Cycle":162,"Lane":3,"Tile":1215,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF256","HCSMMF245","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.168 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1219 Request: {"Cycle":162,"Lane":3,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF273","HCSMMF223","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.169 -08 000000115 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1220 Request: {"Cycle":162,"Lane":3,"Tile":1220,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF283","HCSMMF182","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.170 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1225 Request: {"Cycle":162,"Lane":3,"Tile":1225,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF190","HCSMMF234","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.170 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1227 Request: {"Cycle":162,"Lane":3,"Tile":1227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF219","HCSMMF237","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.171 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1221 Request: {"Cycle":162,"Lane":3,"Tile":1221,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF218","HCSMMF274","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.172 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1208 Request: {"Cycle":162,"Lane":3,"Tile":1208,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF206","HCSMMF180","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.173 -08 000000107 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1217 Request: {"Cycle":162,"Lane":3,"Tile":1217,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF186","HCSMMF241","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.173 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1213 Request: {"Cycle":162,"Lane":3,"Tile":1213,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF228","HCSMMF184","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.174 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1228 Request: {"Cycle":162,"Lane":3,"Tile":1228,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF204","HCSMMF215","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.176 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 162 Tile: 1207 Request: {"Cycle":162,"Lane":3,"Tile":1207,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF251","HCSMMF285","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:22.178 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:22.184 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-03-02 13:16:22.192 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:22.193 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:16:22.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:22.193 -08 000000042 INF: Compensator: Moving OutOfPath 17-03-02 13:16:22.193 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n 17-03-02 13:16:22.334 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:22.394 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:22.410 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:22.411 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-03-02 13:16:22.462 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:22.468 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-03-02 13:16:22.579 -08 000000052 INF: FPGA: Recv MIOCOMPR 17-03-02 13:16:22.579 -08 000000042 INF: Compensator: Moved OutOfPath in 386 ms 17-03-02 13:16:22.579 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543 17-03-02 13:16:22.580 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:22.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:22.582 -08 000000087 INF: ===================Move Tilt Motor 1=================== 17-03-02 13:16:22.582 -08 000000094 INF: ===================Move Tilt Motor 3=================== 17-03-02 13:16:22.582 -08 000000036 INF: ===================Move Tilt Motor 2=================== 17-03-02 13:16:22.582 -08 000000087 INF: ====================================== 17-03-02 13:16:22.583 -08 000000036 INF: ====================================== 17-03-02 13:16:22.583 -08 000000094 INF: ====================================== 17-03-02 13:16:22.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:22.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:22.591 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm. 17-03-02 13:16:22.600 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm. 17-03-02 13:16:22.600 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-03-02 13:16:22.600 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-03-02 13:16:22.600 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:22.601 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:22.604 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0 17-03-02 13:16:22.604 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format 17-03-02 13:16:22.604 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n 17-03-02 13:16:22.644 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:22.645 -08 000000065 INF: FPGA: Recv ZSTEP 17-03-02 13:16:22.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:22.645 -08 000000042 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:16:22.645 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1564 mm 17-03-02 13:16:22.646 -08 000000042 INF: FPGA: Xmit ZTRG 0\n 17-03-02 13:16:22.653 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:22.659 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-03-02 13:16:22.706 -08 000000086 INF: FPGA: Recv ZTRG 17-03-02 13:16:22.706 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n 17-03-02 13:16:22.707 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:22.766 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:22.768 -08 000000117 INF: FPGA: Recv ZYT 17-03-02 13:16:22.768 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-03-02 13:16:22.768 -08 000000042 INF: FPGA: Xmit ZMV 60292\n 17-03-02 13:16:22.772 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-03-02 13:16:22.807 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-03-02 13:16:22.830 -08 000000073 INF: FPGA: Recv @LOG Trigger Camera 17-03-02 13:16:22.830 -08 000000073 INF: FPGA: Recv ZMV 17-03-02 13:16:22.830 -08 000000006 INF: FPGA: Trigger Camera 17-03-02 13:16:22.830 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.0059 ms 17-03-02 13:16:22.830 -08 000000042 INF: FPGA: Xmit ZDACR\n 17-03-02 13:16:22.862 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:22.892 -08 000000095 INF: FPGA: Recv ZDACR 60292 17-03-02 13:16:22.892 -08 000000042 INF: Z Motor: MoveAndTrigger took 246.4769 ms w/comms 17-03-02 13:16:22.892 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:16:22.892 -08 000000042 INF: Z Motor: MoveAbsStepped took 246.664 ms 17-03-02 13:16:22.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:22.893 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:22.893 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm. 17-03-02 13:16:22.902 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-03-02 13:16:22.902 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:16:22.902 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:16:22.902 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format 17-03-02 13:16:22.902 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n 17-03-02 13:16:22.954 -08 000000047 INF: FPGA: Recv ZSTEP 17-03-02 13:16:22.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:22.964 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm. 17-03-02 13:16:22.973 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-03-02 13:16:22.973 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:16:22.973 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-03-02 13:16:22.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:22.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:16:22.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:22.976 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1 17-03-02 13:16:22.976 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:22.976 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:22.977 -08 000000065 INF: ===================MoveEmissionFilters=================== 17-03-02 13:16:22.977 -08 000000097 INF: ===================Move X,Y=================== 17-03-02 13:16:22.978 -08 000000097 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:16:22.978 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:16:22.978 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:16:22.978 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:16:22.978 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:16:22.979 -08 000000108 INF: ===================Move X Motor without settling=================== 17-03-02 13:16:22.979 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:16:22.979 -08 000000056 INF: ===================Move Y Motor without settling=================== 17-03-02 13:16:22.979 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:16:22.979 -08 000000108 INF: X Motor: Xmit PR VM\n 17-03-02 13:16:22.979 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:16:22.979 -08 000000056 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9237 mm 17-03-02 13:16:22.979 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:16:22.979 -08 000000056 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:16:22.979 -08 000000056 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:22.980 -08 000000102 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:16:22.980 -08 000000104 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:16:22.980 -08 000000033 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:16:22.980 -08 000000101 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:16:22.981 -08 000000102 INF: ====================================== 17-03-02 13:16:22.981 -08 000000098 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:16:22.981 -08 000000101 INF: ====================================== 17-03-02 13:16:22.981 -08 000000062 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:16:22.981 -08 000000032 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:16:22.981 -08 000000117 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:16:22.981 -08 000000033 INF: ====================================== 17-03-02 13:16:22.981 -08 000000062 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:16:22.981 -08 000000098 INF: ====================================== 17-03-02 13:16:22.981 -08 000000062 INF: ====================================== 17-03-02 13:16:22.982 -08 000000117 INF: ====================================== 17-03-02 13:16:22.982 -08 000000032 INF: ====================================== 17-03-02 13:16:22.982 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:16:22.983 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:16:22.983 -08 000000104 INF: ====================================== 17-03-02 13:16:22.984 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:16:22.984 -08 000000100 INF: ====================================== 17-03-02 13:16:22.984 -08 000000044 INF: ====================================== 17-03-02 13:16:22.985 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:16:22.985 -08 000000086 INF: ====================================== 17-03-02 13:16:22.986 -08 000000038 INF: ====================================== 17-03-02 13:16:22.987 -08 000000065 INF: ====================================== 17-03-02 13:16:22.993 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:23.018 -08 000000108 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:16:23.018 -08 000000108 INF: X Motor: Xmit PR VI\n 17-03-02 13:16:23.019 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:16:23.019 -08 000000056 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:16:23.019 -08 000000056 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:23.079 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:23.079 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB=================== 17-03-02 13:16:23.080 -08 000000108 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:16:23.080 -08 000000108 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:16:23.080 -08 000000108 INF: X Motor: Moving to 77.4806 mm @15.000 mm/sec, started at 75.2402 mm 17-03-02 13:16:23.080 -08 000000108 INF: X Motor: Xmit MA 7570\n 17-03-02 13:16:23.082 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:16:23.082 -08 000000056 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:23.143 -08 000000108 INF: X Motor: Recv MA 7570\r\n> 17-03-02 13:16:23.143 -08 000000056 INF: Y Motor: Recv v 0\r 17-03-02 13:16:23.143 -08 000000056 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:23.143 -08 000000108 INF: X Motor: WaitUntilStopped 60149 17-03-02 13:16:23.143 -08 000000056 INF: Y Motor: Set target position to 5953351 encoder counts 17-03-02 13:16:23.143 -08 000000056 INF: Y Motor: Xmit s r0xca 5953351\r 17-03-02 13:16:23.145 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-03-02 13:16:23.179 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP9600R\r 17-03-02 13:16:23.208 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:16:23.208 -08 000000056 INF: Y Motor: Start the move command 17-03-02 13:16:23.208 -08 000000056 INF: Y Motor: Xmit t 1\r 17-03-02 13:16:23.268 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:23.270 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:16:23.270 -08 000000056 INF: Y Motor: WaitUntilStopped 61984 17-03-02 13:16:23.270 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:23.368 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:23.394 -08 000000056 INF: Y Motor: Unshifted Position: 1071275 17-03-02 13:16:23.444 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:23.456 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:23.569 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:23.704 -08 000000056 INF: Y Motor: Unshifted Position: 1774033 17-03-02 13:16:23.706 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:23.754 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:23.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:23.767 -08 000000108 INF: X Motor: Xmit PR ER\n 17-03-02 13:16:23.829 -08 000000108 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:16:23.829 -08 000000108 INF: X Motor: Moved to 77.4814 after 686 ms 17-03-02 13:16:23.829 -08 000000108 INF: ====================================== 17-03-02 13:16:23.879 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:24.016 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:24.019 -08 000000056 INF: Y Motor: Unshifted Position: 2559888 17-03-02 13:16:24.069 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:24.082 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:24.191 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:24.330 -08 000000056 INF: Y Motor: Unshifted Position: 3338188 17-03-02 13:16:24.332 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:24.380 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:24.393 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:24.503 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:24.643 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:24.644 -08 000000056 INF: Y Motor: Unshifted Position: 4120740 17-03-02 13:16:24.694 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:24.703 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:24.816 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:24.952 -08 000000056 INF: Y Motor: Unshifted Position: 4901517 17-03-02 13:16:24.953 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:25.002 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:25.017 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:25.127 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:25.266 -08 000000056 INF: Y Motor: Unshifted Position: 5680001 17-03-02 13:16:25.267 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:25.316 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:25.327 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:25.441 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:25.577 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:25.577 -08 000000056 INF: Y Motor: Unshifted Position: 5953353 17-03-02 13:16:25.577 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:16:25.577 -08 000000056 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:25.641 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:25.642 -08 000000056 INF: Y Motor: Recv v 0\r 17-03-02 13:16:25.642 -08 000000056 INF: Y Motor: Moved to 64.5335 after 2372 ms 17-03-02 13:16:25.642 -08 000000056 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:16:25.701 -08 000000056 INF: Y Motor: Recv v 4096\r 17-03-02 13:16:25.701 -08 000000056 INF: Y Motor: Status After move finished OK: 17-03-02 13:16:25.701 -08 000000056 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:25.763 -08 000000056 INF: Y Motor: Recv v 0\r 17-03-02 13:16:25.763 -08 000000056 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:25.763 -08 000000056 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:16:25.827 -08 000000056 INF: Y Motor: Recv v 402653184\r 17-03-02 13:16:25.827 -08 000000056 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:16:25.827 -08 000000056 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:16:25.827 -08 000000056 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:16:25.889 -08 000000056 INF: Y Motor: Recv v 0\r 17-03-02 13:16:25.889 -08 000000056 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:16:25.889 -08 000000056 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:16:25.889 -08 000000056 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:25.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:25.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:25.952 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:16:25.952 -08 000000056 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:16:25.952 -08 000000056 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:26.023 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:16:26.023 -08 000000056 INF: ====================================== 17-03-02 13:16:26.024 -08 000000097 INF: ===================Move X,Y=================== 17-03-02 13:16:26.026 -08 000000097 INF: ====================================== 17-03-02 13:16:26.027 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:26.028 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:26.028 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec 17-03-02 13:16:26.028 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r 17-03-02 13:16:26.076 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:16:26.076 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n 17-03-02 13:16:26.136 -08 000000100 INF: FPGA: Recv ZFREQCL 17-03-02 13:16:26.136 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:16:26.137 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:26.137 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:16:26.198 -08 000000050 INF: FPGA: Recv TDIYERD 6453352 17-03-02 13:16:26.198 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm) 17-03-02 13:16:26.198 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:26.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:26.200 -08 000000102 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:26.200 -08 000000122 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:16:26.200 -08 000000122 INF: ====================================== 17-03-02 13:16:26.201 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:26.201 -08 000000102 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:16:26.201 -08 000000102 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:26.202 -08 000000102 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:16:26.203 -08 000000102 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:16:26.203 -08 000000102 INF: FPGA: Xmit TDIYPOS 6433351\n 17-03-02 13:16:26.263 -08 000000031 INF: FPGA: Recv TDIYPOS 17-03-02 13:16:26.263 -08 000000102 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:16:26.264 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:26.265 -08 000000102 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:16:26.265 -08 000000102 INF: FPGA: Xmit TDIYARM2 3072 1 1\n 17-03-02 13:16:26.329 -08 000000045 INF: FPGA: Recv TDIYARM2 17-03-02 13:16:26.330 -08 000000102 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-03-02 13:16:26.331 -08 000000102 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:26.333 -08 000000102 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:16:26.333 -08 000000102 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:26.334 -08 000000102 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-03-02 13:16:26.335 -08 000000102 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:16:26.336 -08 000000102 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:16:26.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:26.577 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:26.708 -08 000000102 INF: Camera #0 AttachBuffer (imageDataPtr = 69126516224 imgPtr = 69126516224 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-03-02 13:16:26.708 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072 17-03-02 13:16:26.708 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:16:26.724 -08 000000102 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:16:26.725 -08 000000102 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:16:26.827 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:26.887 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:27.137 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:27.137 -08 000000102 INF: Camera #2 AttachBuffer (imageDataPtr = 53821386880 imgPtr = 53955604608 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-03-02 13:16:27.138 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072 17-03-02 13:16:27.138 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:16:27.153 -08 000000102 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-03-02 13:16:27.156 -08 000000102 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-03-02 13:16:27.158 -08 000000102 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:27.160 -08 000000102 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:27.161 -08 000000102 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:16:27.162 -08 000000102 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:27.164 -08 000000102 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:16:27.165 -08 000000102 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:16:27.165 -08 000000102 INF: Z Motor: Arming to move to -0.0100 mm 17-03-02 13:16:27.165 -08 000000102 INF: FPGA: Xmit ZYT 0 2\n 17-03-02 13:16:27.200 -08 000000047 INF: FPGA: Recv ZYT 17-03-02 13:16:27.200 -08 000000102 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines) 17-03-02 13:16:27.200 -08 000000102 INF: FPGA: Xmit ZARM 2621\n 17-03-02 13:16:27.201 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:27.259 -08 000000032 INF: FPGA: Recv ZARM 17-03-02 13:16:27.259 -08 000000102 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.0512 ms 17-03-02 13:16:27.259 -08 000000102 INF: Z Motor: ArmAbsStepped took 94.5906 ms 17-03-02 13:16:27.260 -08 000000102 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:27.262 -08 000000102 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:27.264 -08 000000102 INF: ====================================== 17-03-02 13:16:27.265 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:27.266 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:27.267 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:27.267 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:27.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:27.269 -08 000000073 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:16:27.269 -08 000000096 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:16:27.269 -08 000000073 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:16:27.269 -08 000000073 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:16:27.269 -08 000000073 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:16:27.269 -08 000000073 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:16:27.269 -08 000000096 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:16:27.269 -08 000000096 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:16:27.269 -08 000000096 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:16:27.271 -08 000000096 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:16:27.451 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:27.509 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:27.634 -08 000000031 INF: FPGA: Recv EX2MV 17-03-02 13:16:27.634 -08 000000031 INF: FPGA: Recv EX1MV 17-03-02 13:16:27.634 -08 000000073 INF: Excitation Filter 2: Moved -107 steps in 364.7781 ms 17-03-02 13:16:27.634 -08 000000073 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.9652 ms 17-03-02 13:16:27.634 -08 000000073 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.0572 ms 17-03-02 13:16:27.634 -08 000000096 INF: Excitation Filter 1: Moved -107 steps in 364.5485 ms 17-03-02 13:16:27.634 -08 000000096 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.9846 ms 17-03-02 13:16:27.634 -08 000000096 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.1652 ms 17-03-02 13:16:27.635 -08 000000073 INF: ====================================== 17-03-02 13:16:27.635 -08 000000096 INF: ====================================== 17-03-02 13:16:27.636 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:27.637 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:27.638 -08 000000095 INF: ===================Serial=================== 17-03-02 13:16:27.638 -08 000000065 INF: ===================Camera TDI=================== 17-03-02 13:16:27.638 -08 000000126 INF: ===================Move Y Motor without settling=================== 17-03-02 13:16:27.639 -08 000000094 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:27.639 -08 000000126 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm 17-03-02 13:16:27.639 -08 000000126 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:16:27.639 -08 000000126 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:27.639 -08 000000095 INF: ===================Serial, FPGA Z Wait=================== 17-03-02 13:16:27.639 -08 000000095 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:16:27.639 -08 000000065 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:16:27.640 -08 000000094 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:16:27.640 -08 000000131 INF: ===================Camera TDI=================== 17-03-02 13:16:27.640 -08 000000108 INF: ===================Camera TDI=================== 17-03-02 13:16:27.641 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:27.641 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:27.642 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:27.642 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:27.644 -08 000000094 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:16:27.700 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:16:27.700 -08 000000126 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:16:27.700 -08 000000126 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:27.759 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:27.762 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:16:27.762 -08 000000126 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:27.791 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:27.791 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:27.792 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:27.792 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:27.822 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:27.823 -08 000000126 INF: Y Motor: Recv v 0\r 17-03-02 13:16:27.823 -08 000000126 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:27.823 -08 000000126 INF: Y Motor: Set target position to 5797042 encoder counts 17-03-02 13:16:27.823 -08 000000126 INF: Y Motor: Xmit s r0xca 5797042\r 17-03-02 13:16:27.885 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:16:27.885 -08 000000126 INF: Y Motor: Start the move command 17-03-02 13:16:27.885 -08 000000126 INF: Y Motor: Xmit t 1\r 17-03-02 13:16:27.941 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:27.941 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:27.942 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:27.942 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:27.947 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:16:27.947 -08 000000126 INF: Y Motor: WaitUntilStopped 61042 17-03-02 13:16:27.947 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:28.073 -08 000000126 INF: Y Motor: Unshifted Position: 5935033 17-03-02 13:16:28.074 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:28.091 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:28.091 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:28.092 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:28.092 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:28.123 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:28.135 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:28.241 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-03-02 13:16:28.241 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-03-02 13:16:28.241 -08 000000131 INF: ===================Camera #0 Frame #1=================== 17-03-02 13:16:28.242 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-03-02 13:16:28.242 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-03-02 13:16:28.242 -08 000000108 INF: ===================Camera #2 Frame #1=================== 17-03-02 13:16:28.248 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:28.385 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:28.387 -08 000000126 INF: Y Motor: Unshifted Position: 5888228 17-03-02 13:16:28.395 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-03-02 13:16:28.395 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-03-02 13:16:28.395 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-03-02 13:16:28.395 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-03-02 13:16:28.395 -08 000000108 INF: ===================Camera #2 Frame #3=================== 17-03-02 13:16:28.395 -08 000000131 INF: ===================Camera #0 Frame #3=================== 17-03-02 13:16:28.437 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:28.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:28.551 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:16:28.551 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:16:28.551 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:16:28.551 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:16:28.551 -08 000000131 INF: ===================Camera #0 Frame #4=================== 17-03-02 13:16:28.551 -08 000000108 INF: ===================Camera #2 Frame #4=================== 17-03-02 13:16:28.561 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:28.698 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:28.698 -08 000000126 INF: Y Motor: Unshifted Position: 5841522 17-03-02 13:16:28.704 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:16:28.704 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:16:28.704 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:16:28.704 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:16:28.704 -08 000000108 INF: ===================Camera #2 Frame #5=================== 17-03-02 13:16:28.704 -08 000000131 INF: ===================Camera #0 Frame #5=================== 17-03-02 13:16:28.748 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:28.758 -08 000000056 INF: FPGA: Recv ZWAIT 17-03-02 13:16:28.758 -08 000000056 INF: FPGA: Recv TDIYWAIT 17-03-02 13:16:28.759 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:28.759 -08 000000094 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:28.759 -08 000000095 INF: ===================Serial=================== 17-03-02 13:16:28.760 -08 000000094 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:16:28.760 -08 000000095 INF: ===================Serial, Confirm position Z Motor=================== 17-03-02 13:16:28.761 -08 000000095 INF: ===================Serial=================== 17-03-02 13:16:28.761 -08 000000044 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:16:28.761 -08 000000027 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:16:28.761 -08 000000044 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:16:28.761 -08 000000044 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:16:28.762 -08 000000044 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:16:28.762 -08 000000027 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:16:28.762 -08 000000027 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:16:28.762 -08 000000027 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:16:28.762 -08 000000044 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:16:28.762 -08 000000095 INF: ====================================== 17-03-02 13:16:28.763 -08 000000027 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:16:28.858 -08 000000131 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-03-02 13:16:28.858 -08 000000131 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-03-02 13:16:28.858 -08 000000108 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-03-02 13:16:28.858 -08 000000108 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-03-02 13:16:28.858 -08 000000131 INF: ===================Camera #0 Frame #6=================== 17-03-02 13:16:28.858 -08 000000108 INF: ===================Camera #2 Frame #6=================== 17-03-02 13:16:28.861 -08 000000131 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-03-02 13:16:28.861 -08 000000108 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-03-02 13:16:28.862 -08 000000131 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:28.865 -08 000000108 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:28.872 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:28.885 -08 000000131 INF: Camera #0 ReleaseBuffer 17-03-02 13:16:28.885 -08 000000131 INF: ===================Camera TDI=================== 17-03-02 13:16:28.886 -08 000000131 INF: ====================================== 17-03-02 13:16:28.909 -08 000000108 INF: Camera #2 ReleaseBuffer 17-03-02 13:16:28.909 -08 000000108 INF: ===================Camera TDI=================== 17-03-02 13:16:28.910 -08 000000108 INF: ====================================== 17-03-02 13:16:28.912 -08 000000065 INF: ===================Camera TDI=================== 17-03-02 13:16:28.913 -08 000000065 INF: ====================================== 17-03-02 13:16:29.008 -08 000000126 INF: Y Motor: Unshifted Position: 5797059 17-03-02 13:16:29.009 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:29.058 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:29.072 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:29.132 -08 000000045 INF: FPGA: Recv EX1MV 17-03-02 13:16:29.132 -08 000000045 INF: FPGA: Recv EX2MV 17-03-02 13:16:29.132 -08 000000027 INF: Excitation Filter 2: Moved 107 steps in 370.2636 ms 17-03-02 13:16:29.132 -08 000000044 INF: Excitation Filter 1: Moved 107 steps in 370.4818 ms 17-03-02 13:16:29.132 -08 000000027 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.3845 ms 17-03-02 13:16:29.132 -08 000000027 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.5267 ms 17-03-02 13:16:29.132 -08 000000044 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.5798 ms 17-03-02 13:16:29.132 -08 000000044 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.765 ms 17-03-02 13:16:29.133 -08 000000044 INF: ====================================== 17-03-02 13:16:29.133 -08 000000027 INF: ====================================== 17-03-02 13:16:29.134 -08 000000094 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:29.135 -08 000000094 INF: ====================================== 17-03-02 13:16:29.196 -08 000000126 INF: Y Motor: Unshifted Position: 5797043 17-03-02 13:16:29.196 -08 000000126 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:16:29.196 -08 000000126 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:29.258 -08 000000126 INF: Y Motor: Recv v 0\r 17-03-02 13:16:29.258 -08 000000126 INF: Y Motor: Moved to 62.9704 after 1311 ms 17-03-02 13:16:29.258 -08 000000126 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:16:29.322 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:29.322 -08 000000126 INF: Y Motor: Recv v 4097\r 17-03-02 13:16:29.322 -08 000000126 INF: Y Motor: Status After move finished OK: 17-03-02 13:16:29.322 -08 000000126 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:29.383 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:29.384 -08 000000126 INF: Y Motor: Recv v 0\r 17-03-02 13:16:29.384 -08 000000126 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:29.384 -08 000000126 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:16:29.447 -08 000000126 INF: Y Motor: Recv v 134217728\r 17-03-02 13:16:29.447 -08 000000126 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:16:29.447 -08 000000126 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:16:29.447 -08 000000126 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:16:29.507 -08 000000126 INF: Y Motor: Recv v 0\r 17-03-02 13:16:29.507 -08 000000126 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:16:29.507 -08 000000126 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:16:29.507 -08 000000126 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:29.572 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:16:29.572 -08 000000126 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:16:29.572 -08 000000126 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:29.633 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:29.634 -08 000000126 INF: Y Motor: Recv ok\r 17-03-02 13:16:29.634 -08 000000126 INF: ====================================== 17-03-02 13:16:29.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:29.636 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:29.637 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:29.638 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:16:29.694 -08 000000086 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:16:29.694 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:16:29.696 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:29.757 -08 000000129 INF: FPGA: Recv TDIYERD 6297043 17-03-02 13:16:29.757 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:16:29.819 -08 000000030 INF: FPGA: Recv ZADCR 2426 17-03-02 13:16:29.819 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm 17-03-02 13:16:29.819 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:16:29.882 -08 000000074 INF: FPGA: Recv TDIPULSES 3073 17-03-02 13:16:29.882 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072 17-03-02 13:16:29.882 -08 000000042 INF: TDIScan finished after 6918.0377 ms 17-03-02 13:16:29.882 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-03-02 13:16:29.882 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-03-02 13:16:29.882 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:16:29.944 -08 000000073 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:16:29.945 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:29.945 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:29.946 -08 000000045 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:16:29.946 -08 000000036 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:16:29.946 -08 000000045 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:16:29.946 -08 000000045 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:16:29.947 -08 000000087 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:16:29.947 -08 000000036 INF: ====================================== 17-03-02 13:16:29.947 -08 000000087 INF: ====================================== 17-03-02 13:16:29.948 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:30.006 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:30.007 -08 000000045 INF: Y Motor: Recv ok\r 17-03-02 13:16:30.007 -08 000000045 INF: ====================================== 17-03-02 13:16:30.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:30.009 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:30.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:16:30.040 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:30.040 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:16:30.076 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:30.076 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:16:30.172 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:30.172 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:16:30.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-03-02 13:16:30.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:30.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:30.202 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, ETF: Extracting coords=================== 17-03-02 13:16:30.209 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:30.209 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point=================== 17-03-02 13:16:30.210 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics=================== 17-03-02 13:16:30.256 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:30.319 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:30.569 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:30.630 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:30.880 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:30.897 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point=================== 17-03-02 13:16:30.921 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0879021014474384Best Z position at top surface = -0.159509746761642Best Z position at top surface + compensator offset = -0.136809746761642 C:162,L:4,T 17-03-02 13:16:30.922 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159509746761642 17-03-02 13:16:30.922 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97451 17-03-02 13:16:30.922 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0879021014474384 17-03-02 13:16:30.922 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.62986 17-03-02 13:16:30.922 -08 000000042 INF: Z-height at LaneTopSurface is -0.159509746761642. 17-03-02 13:16:30.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:30.944 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:31.060 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:16:31.060 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:16:31.128 -08 000000122 INF: FPGA: Recv ZSTEP 17-03-02 13:16:31.128 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-03-02 13:16:31.130 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.130 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=4.997196, m2=5.40004, m3=5.34543 17-03-02 13:16:31.130 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.131 -08 000000108 INF: ===================Move Tilt Motor 1=================== 17-03-02 13:16:31.131 -08 000000045 INF: ===================Move Tilt Motor 2=================== 17-03-02 13:16:31.132 -08 000000031 INF: ===================Move Tilt Motor 3=================== 17-03-02 13:16:31.132 -08 000000108 INF: ====================================== 17-03-02 13:16:31.132 -08 000000045 INF: ====================================== 17-03-02 13:16:31.132 -08 000000031 INF: ====================================== 17-03-02 13:16:31.133 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.134 -08 000000042 INF: ETF Best Z: -0.1368098 mm (35863 DAC) 17-03-02 13:16:31.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.135 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.135 -08 000000042 INF: Compensator: Moving IntoPath 17-03-02 13:16:31.135 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n 17-03-02 13:16:31.683 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:31.684 -08 000000126 INF: FPGA: Recv MIOCOMPF 17-03-02 13:16:31.684 -08 000000042 INF: Compensator: Moved IntoPath in 548 ms 17-03-02 13:16:31.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:31.692 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92664, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface 17-03-02 13:16:31.692 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03464, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface 17-03-02 13:16:31.698 -08 000000042 INF: Swath 0: Converted transform from (-52.96872, 52.69556) pixels to (-0.018285, 0.018285) mm. 17-03-02 13:16:31.704 -08 000000042 INF: Swath 1: Converted transform from (-67.95566, 51.87937) pixels to (-0.02346, 0.01794) mm. 17-03-02 13:16:31.704 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-03-02 13:16:31.705 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-03-02 13:16:31.705 -08 000000042 INF: Transformed XStagePosition from 76.92664 mm to 76.9083507414907 mm. 17-03-02 13:16:31.716 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5713743561655 mm. 17-03-02 13:16:31.716 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3713743561655 mm. 17-03-02 13:16:31.716 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4621243561655 mm. 17-03-02 13:16:31.719 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:31.719 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:16:31.719 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:31.719 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1 17-03-02 13:16:31.724 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:31.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:31.726 -08 000000096 INF: ===================MoveEmissionFilters=================== 17-03-02 13:16:31.726 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:31.726 -08 000000058 INF: ===================Move X,Y=================== 17-03-02 13:16:31.727 -08 000000030 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:16:31.727 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-03-02 13:16:31.727 -08 000000119 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:16:31.727 -08 000000117 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:16:31.727 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:16:31.727 -08 000000073 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:16:31.727 -08 000000073 INF: Z Motor: Moving to -0.1568 mm, started at -0.0100 mm 17-03-02 13:16:31.727 -08 000000073 INF: FPGA: Xmit ZTRG 0\n 17-03-02 13:16:31.727 -08 000000058 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:16:31.728 -08 000000030 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:16:31.728 -08 000000117 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:16:31.728 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:16:31.728 -08 000000119 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:16:31.728 -08 000000065 INF: ===================Move X Motor without settling=================== 17-03-02 13:16:31.728 -08 000000029 INF: ===================Move Y Motor without settling=================== 17-03-02 13:16:31.728 -08 000000065 INF: X Motor: Xmit PR VM\n 17-03-02 13:16:31.729 -08 000000074 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:16:31.729 -08 000000044 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:16:31.729 -08 000000122 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:16:31.729 -08 000000032 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:16:31.729 -08 000000071 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:16:31.729 -08 000000078 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:16:31.729 -08 000000094 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:16:31.729 -08 000000094 INF: ====================================== 17-03-02 13:16:31.730 -08 000000027 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:16:31.730 -08 000000032 INF: ====================================== 17-03-02 13:16:31.730 -08 000000027 INF: ====================================== 17-03-02 13:16:31.730 -08 000000122 INF: ====================================== 17-03-02 13:16:31.730 -08 000000078 INF: ====================================== 17-03-02 13:16:31.731 -08 000000117 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:16:31.731 -08 000000029 INF: Y Motor: Moving to 64.5714 mm @25.000 mm/sec, started at 62.9704 mm 17-03-02 13:16:31.732 -08 000000029 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:16:31.732 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:31.732 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:16:31.732 -08 000000074 INF: ====================================== 17-03-02 13:16:31.732 -08 000000071 INF: ====================================== 17-03-02 13:16:31.732 -08 000000117 INF: ====================================== 17-03-02 13:16:31.732 -08 000000044 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:16:31.733 -08 000000044 INF: ====================================== 17-03-02 13:16:31.733 -08 000000083 INF: ====================================== 17-03-02 13:16:31.733 -08 000000119 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:16:31.734 -08 000000030 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:16:31.735 -08 000000119 INF: ====================================== 17-03-02 13:16:31.735 -08 000000030 INF: ====================================== 17-03-02 13:16:31.736 -08 000000096 INF: ====================================== 17-03-02 13:16:31.740 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:31.800 -08 000000094 INF: FPGA: Recv ZTRG 17-03-02 13:16:31.800 -08 000000073 INF: FPGA: Xmit ZYT 0 3\n 17-03-02 13:16:31.804 -08 000000029 INF: Y Motor: Recv ok\r 17-03-02 13:16:31.804 -08 000000029 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:16:31.804 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:31.804 -08 000000065 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:16:31.804 -08 000000065 INF: X Motor: Xmit PR VI\n 17-03-02 13:16:31.862 -08 000000097 INF: FPGA: Recv ZYT 17-03-02 13:16:31.862 -08 000000073 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-03-02 13:16:31.862 -08 000000073 INF: FPGA: Xmit ZMV 41106\n 17-03-02 13:16:31.864 -08 000000029 INF: Y Motor: Recv ok\r 17-03-02 13:16:31.864 -08 000000065 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:16:31.864 -08 000000065 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:16:31.864 -08 000000065 INF: X Motor: Moving to 76.9084 mm @15.000 mm/sec, started at 77.4814 mm 17-03-02 13:16:31.864 -08 000000065 INF: X Motor: Xmit MA 7335\n 17-03-02 13:16:31.864 -08 000000029 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:31.926 -08 000000119 INF: FPGA: Recv @LOG Trigger Camera 17-03-02 13:16:31.926 -08 000000006 INF: FPGA: Trigger Camera 17-03-02 13:16:31.928 -08 000000065 INF: X Motor: Recv MA 7335\r\n> 17-03-02 13:16:31.928 -08 000000029 INF: Y Motor: Recv v 0\r 17-03-02 13:16:31.928 -08 000000029 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:31.928 -08 000000065 INF: X Motor: WaitUntilStopped 60038 17-03-02 13:16:31.928 -08 000000029 INF: Y Motor: Set target position to 5957137 encoder counts 17-03-02 13:16:31.928 -08 000000029 INF: Y Motor: Xmit s r0xca 5957137\r 17-03-02 13:16:31.990 -08 000000029 INF: Y Motor: Recv ok\r 17-03-02 13:16:31.990 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:31.990 -08 000000029 INF: Y Motor: Start the move command 17-03-02 13:16:31.990 -08 000000029 INF: Y Motor: Xmit t 1\r 17-03-02 13:16:32.051 -08 000000038 INF: FPGA: Recv ZMV 17-03-02 13:16:32.051 -08 000000073 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.9304 ms 17-03-02 13:16:32.051 -08 000000073 INF: FPGA: Xmit ZDACR\n 17-03-02 13:16:32.053 -08 000000029 INF: Y Motor: Recv ok\r 17-03-02 13:16:32.053 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:32.053 -08 000000029 INF: Y Motor: WaitUntilStopped 60064 17-03-02 13:16:32.053 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:32.113 -08 000000072 INF: FPGA: Recv ZDACR 41106 17-03-02 13:16:32.113 -08 000000073 INF: Z Motor: MoveAndTrigger took 385.9184 ms w/comms 17-03-02 13:16:32.113 -08 000000073 INF: Z Motor: After move to -0.1568, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-03-02 13:16:32.113 -08 000000073 INF: Z Motor: MoveAbsStepped took 386.0834 ms 17-03-02 13:16:32.113 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:32.115 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-03-02 13:16:32.116 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:32.116 -08 000000108 INF: ===================Camera Arm TDI=================== 17-03-02 13:16:32.116 -08 000000097 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:32.117 -08 000000108 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:32.117 -08 000000097 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:16:32.118 -08 000000097 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:32.118 -08 000000108 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:16:32.118 -08 000000097 INF: FPGA: Xmit ZSEL 3\n 17-03-02 13:16:32.175 -08 000000050 INF: FPGA: Recv ZSEL 17-03-02 13:16:32.176 -08 000000097 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:32.176 -08 000000097 INF: FPGA: Xmit TDIBB 1\n 17-03-02 13:16:32.177 -08 000000029 INF: Y Motor: Unshifted Position: 5879376 17-03-02 13:16:32.227 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:32.237 -08 000000083 INF: FPGA: Recv TDIBB 17-03-02 13:16:32.237 -08 000000097 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:32.238 -08 000000097 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:16:32.239 -08 000000097 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:32.240 -08 000000097 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-03-02 13:16:32.241 -08 000000097 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-03-02 13:16:32.241 -08 000000097 INF: FPGA: Xmit ZSTEP 1792263\n 17-03-02 13:16:32.299 -08 000000096 INF: FPGA: Recv ZSTEP 17-03-02 13:16:32.299 -08 000000097 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:32.301 -08 000000097 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:16:32.301 -08 000000097 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:32.303 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:32.303 -08 000000097 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:16:32.303 -08 000000097 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:16:32.303 -08 000000097 INF: Z Motor: Arming to move to -0.1168 mm 17-03-02 13:16:32.303 -08 000000097 INF: FPGA: Xmit ZYT 6437137 4\n 17-03-02 13:16:32.351 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:32.361 -08 000000057 INF: FPGA: Recv ZYT 17-03-02 13:16:32.361 -08 000000097 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6379376 enc / 63.794 mm / ) = 6437137 enc / 64.371 mm 17-03-02 13:16:32.361 -08 000000097 INF: FPGA: Xmit ZARM 30621\n 17-03-02 13:16:32.363 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:32.363 -08 000000065 INF: X Motor: Xmit PR ER\n 17-03-02 13:16:32.423 -08 000000102 INF: FPGA: Recv ZARM 17-03-02 13:16:32.423 -08 000000097 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9294 ms 17-03-02 13:16:32.423 -08 000000097 INF: Z Motor: ArmAbsStepped took 119.8508 ms 17-03-02 13:16:32.423 -08 000000097 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:32.425 -08 000000065 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:16:32.425 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:32.425 -08 000000065 INF: X Motor: Moved to 76.9077 after 497 ms 17-03-02 13:16:32.425 -08 000000065 INF: ====================================== 17-03-02 13:16:32.426 -08 000000097 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:16:32.427 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:32.428 -08 000000097 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:16:32.429 -08 000000097 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:32.430 -08 000000097 INF: ====================================== 17-03-02 13:16:32.490 -08 000000029 INF: Y Motor: Unshifted Position: 5957137 17-03-02 13:16:32.490 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:16:32.490 -08 000000029 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:32.551 -08 000000029 INF: Y Motor: Recv v 0\r 17-03-02 13:16:32.551 -08 000000029 INF: Y Motor: Moved to 64.5714 after 498 ms 17-03-02 13:16:32.551 -08 000000029 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:16:32.613 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:32.613 -08 000000029 INF: Y Motor: Recv v 4096\r 17-03-02 13:16:32.613 -08 000000029 INF: Y Motor: Status After move finished OK: 17-03-02 13:16:32.613 -08 000000029 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:32.676 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:32.677 -08 000000029 INF: Y Motor: Recv v 0\r 17-03-02 13:16:32.677 -08 000000029 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:32.677 -08 000000029 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:16:32.737 -08 000000029 INF: Y Motor: Recv v 402653184\r 17-03-02 13:16:32.737 -08 000000029 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:16:32.737 -08 000000029 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:16:32.737 -08 000000029 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:16:32.802 -08 000000029 INF: Y Motor: Recv v 0\r 17-03-02 13:16:32.802 -08 000000029 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:16:32.802 -08 000000029 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:16:32.802 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:32.864 -08 000000029 INF: Y Motor: Recv ok\r 17-03-02 13:16:32.864 -08 000000029 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:16:32.864 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:32.926 -08 000000029 INF: Y Motor: Recv ok\r 17-03-02 13:16:32.926 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:32.926 -08 000000029 INF: ====================================== 17-03-02 13:16:32.927 -08 000000058 INF: ===================Move X,Y=================== 17-03-02 13:16:32.929 -08 000000058 INF: ====================================== 17-03-02 13:16:32.987 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:33.115 -08 000000108 INF: Camera #0 AttachBuffer (imageDataPtr = 56922673200 imgPtr = 56922673200 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:16:33.115 -08 000000108 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:16:33.115 -08 000000108 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:16:33.130 -08 000000108 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:33.132 -08 000000108 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:16:33.237 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:33.300 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:33.550 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:33.611 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:33.861 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:33.924 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:34.174 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:34.177 -08 000000108 INF: Camera #2 AttachBuffer (imageDataPtr = 64223121456 imgPtr = 65129091120 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:16:34.177 -08 000000108 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:16:34.177 -08 000000108 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:16:34.192 -08 000000108 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:34.194 -08 000000108 INF: ===================Camera Arm TDI=================== 17-03-02 13:16:34.195 -08 000000108 INF: ====================================== 17-03-02 13:16:34.196 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:34.197 -08 000000073 INF: ====================================== 17-03-02 13:16:34.198 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:34.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:34.199 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-03-02 13:16:34.199 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-03-02 13:16:34.236 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:34.237 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:16:34.237 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-03-02 13:16:34.297 -08 000000050 INF: FPGA: Recv ZFREQCL 17-03-02 13:16:34.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:16:34.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:34.297 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:16:34.360 -08 000000131 INF: FPGA: Recv TDIYERD 6457138 17-03-02 13:16:34.360 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457138 counts (64.571 mm) 17-03-02 13:16:34.360 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:34.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:34.361 -08 000000053 INF: ===================TDI FPGA Arm=================== 17-03-02 13:16:34.361 -08 000000094 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:16:34.362 -08 000000094 INF: ====================================== 17-03-02 13:16:34.362 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:34.363 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:16:34.363 -08 000000053 INF: FPGA: Xmit TDIYPOS 6346212\n 17-03-02 13:16:34.421 -08 000000045 INF: FPGA: Recv TDIYPOS 17-03-02 13:16:34.421 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:34.423 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:16:34.423 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6437137 1 1\n 17-03-02 13:16:34.483 -08 000000078 INF: FPGA: Recv TDIYARM3 17-03-02 13:16:34.483 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:34.484 -08 000000053 INF: ===================TDI FPGA Arm=================== 17-03-02 13:16:34.485 -08 000000053 INF: ====================================== 17-03-02 13:16:34.486 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:34.486 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:34.487 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:34.487 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:34.488 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:34.488 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:34.489 -08 000000111 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:16:34.489 -08 000000087 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:16:34.489 -08 000000111 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:16:34.489 -08 000000111 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:16:34.489 -08 000000111 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:16:34.489 -08 000000087 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:16:34.490 -08 000000087 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:16:34.490 -08 000000087 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:16:34.490 -08 000000111 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:16:34.491 -08 000000087 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:16:34.546 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:34.796 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:34.859 -08 000000030 INF: FPGA: Recv EX2MV 17-03-02 13:16:34.859 -08 000000030 INF: FPGA: Recv EX1MV 17-03-02 13:16:34.859 -08 000000087 INF: Excitation Filter 1: Moved -107 steps in 369.2197 ms 17-03-02 13:16:34.859 -08 000000111 INF: Excitation Filter 2: Moved -107 steps in 369.423 ms 17-03-02 13:16:34.859 -08 000000111 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.5184 ms 17-03-02 13:16:34.859 -08 000000111 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.5903 ms 17-03-02 13:16:34.859 -08 000000087 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.3337 ms 17-03-02 13:16:34.859 -08 000000087 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.7439 ms 17-03-02 13:16:34.859 -08 000000111 INF: ====================================== 17-03-02 13:16:34.860 -08 000000087 INF: ====================================== 17-03-02 13:16:34.860 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:34.861 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:34.862 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:34.862 -08 000000131 INF: ===================Camera TDI=================== 17-03-02 13:16:34.862 -08 000000098 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:34.863 -08 000000047 INF: ===================FPGA Z Wait=================== 17-03-02 13:16:34.863 -08 000000094 INF: ===================Move Y Motor without settling=================== 17-03-02 13:16:34.863 -08 000000047 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:16:34.863 -08 000000094 INF: Y Motor: Moving to 14.9230 mm @6.500 mm/sec, started at 64.5714 mm 17-03-02 13:16:34.863 -08 000000094 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:16:34.863 -08 000000094 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:34.863 -08 000000131 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:16:34.863 -08 000000098 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:16:34.864 -08 000000098 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:16:34.864 -08 000000078 INF: ===================Camera TDI=================== 17-03-02 13:16:34.864 -08 000000045 INF: ===================Camera TDI=================== 17-03-02 13:16:34.865 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:34.865 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:34.866 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:34.866 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:34.923 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:16:34.923 -08 000000094 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:16:34.923 -08 000000094 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:34.985 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:16:34.985 -08 000000094 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:35.016 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:35.016 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:35.016 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:35.016 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:35.047 -08 000000094 INF: Y Motor: Recv v 0\r 17-03-02 13:16:35.047 -08 000000094 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:35.047 -08 000000094 INF: Y Motor: Set target position to 992304 encoder counts 17-03-02 13:16:35.047 -08 000000094 INF: Y Motor: Xmit s r0xca 992304\r 17-03-02 13:16:35.109 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:16:35.109 -08 000000094 INF: Y Motor: Start the move command 17-03-02 13:16:35.109 -08 000000094 INF: Y Motor: Xmit t 1\r 17-03-02 13:16:35.111 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:35.166 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:35.166 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:35.166 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:35.166 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:35.170 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:35.171 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:16:35.171 -08 000000094 INF: Y Motor: WaitUntilStopped 67638 17-03-02 13:16:35.171 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:35.231 -08 000000122 INF: FPGA: Recv ZWAIT 17-03-02 13:16:35.231 -08 000000047 INF: ====================================== 17-03-02 13:16:35.297 -08 000000094 INF: Y Motor: Unshifted Position: 5895284 17-03-02 13:16:35.316 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:16:35.316 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-03-02 13:16:35.316 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:16:35.316 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-03-02 13:16:35.316 -08 000000045 INF: ===================Camera #2 Frame #5=================== 17-03-02 13:16:35.316 -08 000000078 INF: ===================Camera #0 Frame #5=================== 17-03-02 13:16:35.347 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:35.420 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:35.470 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:35.483 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-03-02 13:16:35.483 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-03-02 13:16:35.483 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-03-02 13:16:35.483 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-03-02 13:16:35.483 -08 000000045 INF: ===================Camera #2 Frame #11=================== 17-03-02 13:16:35.483 -08 000000078 INF: ===================Camera #0 Frame #11=================== 17-03-02 13:16:35.484 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:35.609 -08 000000094 INF: Y Motor: Unshifted Position: 5691620 17-03-02 13:16:35.653 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:16:35.653 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:16:35.653 -08 000000078 INF: ===================Camera #0 Frame #17=================== 17-03-02 13:16:35.654 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:16:35.654 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:16:35.654 -08 000000045 INF: ===================Camera #2 Frame #17=================== 17-03-02 13:16:35.659 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:35.734 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:35.782 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:35.796 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:35.823 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-03-02 13:16:35.823 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-03-02 13:16:35.823 -08 000000078 INF: ===================Camera #0 Frame #23=================== 17-03-02 13:16:35.825 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-03-02 13:16:35.825 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-03-02 13:16:35.825 -08 000000045 INF: ===================Camera #2 Frame #23=================== 17-03-02 13:16:35.919 -08 000000094 INF: Y Motor: Unshifted Position: 5489476 17-03-02 13:16:35.969 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:35.993 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-03-02 13:16:35.993 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-03-02 13:16:35.993 -08 000000078 INF: ===================Camera #0 Frame #30=================== 17-03-02 13:16:35.996 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-03-02 13:16:35.996 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-03-02 13:16:35.996 -08 000000045 INF: ===================Camera #2 Frame #30=================== 17-03-02 13:16:36.046 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:36.095 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:36.106 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:36.166 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-03-02 13:16:36.166 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-03-02 13:16:36.166 -08 000000078 INF: ===================Camera #0 Frame #36=================== 17-03-02 13:16:36.170 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-03-02 13:16:36.170 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-03-02 13:16:36.170 -08 000000045 INF: ===================Camera #2 Frame #36=================== 17-03-02 13:16:36.233 -08 000000094 INF: Y Motor: Unshifted Position: 5284717 17-03-02 13:16:36.283 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:36.336 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:16:36.336 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:16:36.336 -08 000000078 INF: ===================Camera #0 Frame #42=================== 17-03-02 13:16:36.341 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:16:36.341 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:16:36.341 -08 000000045 INF: ===================Camera #2 Frame #42=================== 17-03-02 13:16:36.356 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:36.407 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:36.420 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:36.506 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-03-02 13:16:36.506 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-03-02 13:16:36.506 -08 000000078 INF: ===================Camera #0 Frame #48=================== 17-03-02 13:16:36.512 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-03-02 13:16:36.512 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-03-02 13:16:36.512 -08 000000045 INF: ===================Camera #2 Frame #49=================== 17-03-02 13:16:36.546 -08 000000094 INF: Y Motor: Unshifted Position: 5082355 17-03-02 13:16:36.596 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:36.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:36.676 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-03-02 13:16:36.676 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-03-02 13:16:36.676 -08 000000078 INF: ===================Camera #0 Frame #55=================== 17-03-02 13:16:36.686 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-03-02 13:16:36.686 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-03-02 13:16:36.686 -08 000000045 INF: ===================Camera #2 Frame #55=================== 17-03-02 13:16:36.719 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:36.730 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:36.730 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:36.730 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:36.731 -08 000000018 INF: WaitCommand(5000) start 17-03-02 13:16:36.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left=================== 17-03-02 13:16:36.849 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:16:36.849 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:16:36.849 -08 000000078 INF: ===================Camera #0 Frame #61=================== 17-03-02 13:16:36.855 -08 000000094 INF: Y Motor: Unshifted Position: 4880849 17-03-02 13:16:36.857 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:16:36.857 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:16:36.857 -08 000000045 INF: ===================Camera #2 Frame #61=================== 17-03-02 13:16:36.905 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:37.019 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:16:37.019 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:16:37.019 -08 000000078 INF: ===================Camera #0 Frame #67=================== 17-03-02 13:16:37.028 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68. 17-03-02 13:16:37.028 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68 17-03-02 13:16:37.028 -08 000000045 INF: ===================Camera #2 Frame #68=================== 17-03-02 13:16:37.032 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:37.168 -08 000000094 INF: Y Motor: Unshifted Position: 4675882 17-03-02 13:16:37.189 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-03-02 13:16:37.189 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-03-02 13:16:37.189 -08 000000078 INF: ===================Camera #0 Frame #74=================== 17-03-02 13:16:37.202 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-03-02 13:16:37.202 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-03-02 13:16:37.202 -08 000000045 INF: ===================Camera #2 Frame #74=================== 17-03-02 13:16:37.218 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:37.342 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:37.360 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:16:37.360 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:16:37.360 -08 000000078 INF: ===================Camera #0 Frame #80=================== 17-03-02 13:16:37.372 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:16:37.372 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:16:37.372 -08 000000045 INF: ===================Camera #2 Frame #80=================== 17-03-02 13:16:37.481 -08 000000094 INF: Y Motor: Unshifted Position: 4473723 17-03-02 13:16:37.528 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:16:37.528 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:16:37.528 -08 000000078 INF: ===================Camera #0 Frame #86=================== 17-03-02 13:16:37.531 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:37.541 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87. 17-03-02 13:16:37.541 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87 17-03-02 13:16:37.541 -08 000000045 INF: ===================Camera #2 Frame #87=================== 17-03-02 13:16:37.655 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:37.698 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:16:37.698 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:16:37.698 -08 000000078 INF: ===================Camera #0 Frame #92=================== 17-03-02 13:16:37.716 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93. 17-03-02 13:16:37.716 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93 17-03-02 13:16:37.716 -08 000000045 INF: ===================Camera #2 Frame #93=================== 17-03-02 13:16:37.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:37.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left=================== 17-03-02 13:16:37.791 -08 000000094 INF: Y Motor: Unshifted Position: 4272007 17-03-02 13:16:37.841 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:37.868 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-03-02 13:16:37.868 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-03-02 13:16:37.868 -08 000000078 INF: ===================Camera #0 Frame #99=================== 17-03-02 13:16:37.887 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-03-02 13:16:37.887 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-03-02 13:16:37.887 -08 000000045 INF: ===================Camera #2 Frame #99=================== 17-03-02 13:16:37.968 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:38.041 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-03-02 13:16:38.041 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-03-02 13:16:38.041 -08 000000078 INF: ===================Camera #0 Frame #105=================== 17-03-02 13:16:38.057 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106. 17-03-02 13:16:38.057 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106 17-03-02 13:16:38.057 -08 000000045 INF: ===================Camera #2 Frame #106=================== 17-03-02 13:16:38.104 -08 000000094 INF: Y Motor: Unshifted Position: 4067685 17-03-02 13:16:38.154 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:38.211 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:16:38.211 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:16:38.211 -08 000000078 INF: ===================Camera #0 Frame #111=================== 17-03-02 13:16:38.231 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112. 17-03-02 13:16:38.231 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112 17-03-02 13:16:38.231 -08 000000045 INF: ===================Camera #2 Frame #112=================== 17-03-02 13:16:38.278 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:38.381 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-03-02 13:16:38.381 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-03-02 13:16:38.381 -08 000000078 INF: ===================Camera #0 Frame #117=================== 17-03-02 13:16:38.402 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118. 17-03-02 13:16:38.402 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118 17-03-02 13:16:38.402 -08 000000045 INF: ===================Camera #2 Frame #118=================== 17-03-02 13:16:38.417 -08 000000094 INF: Y Motor: Unshifted Position: 3864891 17-03-02 13:16:38.467 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:38.551 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-03-02 13:16:38.551 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-03-02 13:16:38.551 -08 000000078 INF: ===================Camera #0 Frame #124=================== 17-03-02 13:16:38.573 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125. 17-03-02 13:16:38.573 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125 17-03-02 13:16:38.573 -08 000000045 INF: ===================Camera #2 Frame #125=================== 17-03-02 13:16:38.591 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:38.724 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:16:38.724 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:16:38.724 -08 000000078 INF: ===================Camera #0 Frame #130=================== 17-03-02 13:16:38.727 -08 000000094 INF: Y Motor: Unshifted Position: 3663170 17-03-02 13:16:38.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:38.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left=================== 17-03-02 13:16:38.747 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131. 17-03-02 13:16:38.747 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131 17-03-02 13:16:38.747 -08 000000045 INF: ===================Camera #2 Frame #131=================== 17-03-02 13:16:38.777 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:38.894 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-03-02 13:16:38.894 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-03-02 13:16:38.894 -08 000000078 INF: ===================Camera #0 Frame #136=================== 17-03-02 13:16:38.904 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:38.918 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137. 17-03-02 13:16:38.918 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137 17-03-02 13:16:38.918 -08 000000045 INF: ===================Camera #2 Frame #137=================== 17-03-02 13:16:39.040 -08 000000094 INF: Y Motor: Unshifted Position: 3459723 17-03-02 13:16:39.063 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-03-02 13:16:39.063 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-03-02 13:16:39.063 -08 000000078 INF: ===================Camera #0 Frame #143=================== 17-03-02 13:16:39.089 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144. 17-03-02 13:16:39.089 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144 17-03-02 13:16:39.089 -08 000000045 INF: ===================Camera #2 Frame #144=================== 17-03-02 13:16:39.090 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:39.214 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:39.236 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-03-02 13:16:39.236 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-03-02 13:16:39.236 -08 000000078 INF: ===================Camera #0 Frame #149=================== 17-03-02 13:16:39.263 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150. 17-03-02 13:16:39.263 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150 17-03-02 13:16:39.263 -08 000000045 INF: ===================Camera #2 Frame #150=================== 17-03-02 13:16:39.353 -08 000000094 INF: Y Motor: Unshifted Position: 3255622 17-03-02 13:16:39.403 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:39.406 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:16:39.406 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:16:39.406 -08 000000078 INF: ===================Camera #0 Frame #155=================== 17-03-02 13:16:39.434 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156. 17-03-02 13:16:39.434 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156 17-03-02 13:16:39.434 -08 000000045 INF: ===================Camera #2 Frame #156=================== 17-03-02 13:16:39.528 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:39.576 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-03-02 13:16:39.576 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-03-02 13:16:39.576 -08 000000078 INF: ===================Camera #0 Frame #161=================== 17-03-02 13:16:39.605 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163. 17-03-02 13:16:39.605 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163 17-03-02 13:16:39.605 -08 000000045 INF: ===================Camera #2 Frame #163=================== 17-03-02 13:16:39.664 -08 000000094 INF: Y Motor: Unshifted Position: 3053908 17-03-02 13:16:39.714 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:39.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:39.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left=================== 17-03-02 13:16:39.746 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:16:39.746 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:16:39.746 -08 000000078 INF: ===================Camera #0 Frame #168=================== 17-03-02 13:16:39.779 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169. 17-03-02 13:16:39.779 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169 17-03-02 13:16:39.779 -08 000000045 INF: ===================Camera #2 Frame #169=================== 17-03-02 13:16:39.838 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:39.919 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:16:39.919 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:16:39.919 -08 000000078 INF: ===================Camera #0 Frame #174=================== 17-03-02 13:16:39.950 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175. 17-03-02 13:16:39.950 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175 17-03-02 13:16:39.950 -08 000000045 INF: ===================Camera #2 Frame #175=================== 17-03-02 13:16:39.975 -08 000000094 INF: Y Motor: Unshifted Position: 2849816 17-03-02 13:16:40.025 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:40.089 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-03-02 13:16:40.089 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-03-02 13:16:40.089 -08 000000078 INF: ===================Camera #0 Frame #180=================== 17-03-02 13:16:40.121 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182. 17-03-02 13:16:40.121 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182 17-03-02 13:16:40.121 -08 000000045 INF: ===================Camera #2 Frame #182=================== 17-03-02 13:16:40.152 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:40.259 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-03-02 13:16:40.259 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-03-02 13:16:40.259 -08 000000078 INF: ===================Camera #0 Frame #187=================== 17-03-02 13:16:40.288 -08 000000094 INF: Y Motor: Unshifted Position: 2648104 17-03-02 13:16:40.295 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188. 17-03-02 13:16:40.295 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188 17-03-02 13:16:40.295 -08 000000045 INF: ===================Camera #2 Frame #188=================== 17-03-02 13:16:40.338 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:40.432 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-03-02 13:16:40.432 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-03-02 13:16:40.432 -08 000000078 INF: ===================Camera #0 Frame #193=================== 17-03-02 13:16:40.462 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:40.466 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194. 17-03-02 13:16:40.466 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194 17-03-02 13:16:40.466 -08 000000045 INF: ===================Camera #2 Frame #194=================== 17-03-02 13:16:40.599 -08 000000094 INF: Y Motor: Unshifted Position: 2444005 17-03-02 13:16:40.602 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-03-02 13:16:40.602 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-03-02 13:16:40.602 -08 000000078 INF: ===================Camera #0 Frame #199=================== 17-03-02 13:16:40.636 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-03-02 13:16:40.636 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-03-02 13:16:40.636 -08 000000045 INF: ===================Camera #2 Frame #200=================== 17-03-02 13:16:40.649 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:40.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:40.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left=================== 17-03-02 13:16:40.770 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205. 17-03-02 13:16:40.770 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205 17-03-02 13:16:40.770 -08 000000078 INF: ===================Camera #0 Frame #205=================== 17-03-02 13:16:40.776 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:40.805 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207. 17-03-02 13:16:40.805 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207 17-03-02 13:16:40.805 -08 000000045 INF: ===================Camera #2 Frame #207=================== 17-03-02 13:16:40.911 -08 000000094 INF: Y Motor: Unshifted Position: 2242283 17-03-02 13:16:40.940 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-03-02 13:16:40.940 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-03-02 13:16:40.940 -08 000000078 INF: ===================Camera #0 Frame #212=================== 17-03-02 13:16:40.961 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:40.979 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213. 17-03-02 13:16:40.979 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213 17-03-02 13:16:40.979 -08 000000045 INF: ===================Camera #2 Frame #213=================== 17-03-02 13:16:41.089 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:41.113 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-03-02 13:16:41.113 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-03-02 13:16:41.113 -08 000000078 INF: ===================Camera #0 Frame #218=================== 17-03-02 13:16:41.148 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-03-02 13:16:41.148 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-03-02 13:16:41.148 -08 000000045 INF: ===================Camera #2 Frame #219=================== 17-03-02 13:16:41.224 -08 000000094 INF: Y Motor: Unshifted Position: 2039489 17-03-02 13:16:41.274 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:41.283 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224. 17-03-02 13:16:41.283 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224 17-03-02 13:16:41.283 -08 000000078 INF: ===================Camera #0 Frame #224=================== 17-03-02 13:16:41.319 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226. 17-03-02 13:16:41.319 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226 17-03-02 13:16:41.319 -08 000000045 INF: ===================Camera #2 Frame #226=================== 17-03-02 13:16:41.399 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:41.454 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-03-02 13:16:41.454 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-03-02 13:16:41.454 -08 000000078 INF: ===================Camera #0 Frame #231=================== 17-03-02 13:16:41.494 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232. 17-03-02 13:16:41.494 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232 17-03-02 13:16:41.494 -08 000000045 INF: ===================Camera #2 Frame #232=================== 17-03-02 13:16:41.537 -08 000000094 INF: Y Motor: Unshifted Position: 1835171 17-03-02 13:16:41.587 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:41.627 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237. 17-03-02 13:16:41.627 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237 17-03-02 13:16:41.627 -08 000000078 INF: ===================Camera #0 Frame #237=================== 17-03-02 13:16:41.665 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-03-02 13:16:41.665 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-03-02 13:16:41.665 -08 000000045 INF: ===================Camera #2 Frame #238=================== 17-03-02 13:16:41.713 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:41.732 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:41.732 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:41.732 -08 000000018 INF: WaitCommand(5000) end 17-03-02 13:16:41.732 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:41.797 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243. 17-03-02 13:16:41.797 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243 17-03-02 13:16:41.797 -08 000000078 INF: ===================Camera #0 Frame #243=================== 17-03-02 13:16:41.831 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:16:41.836 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245. 17-03-02 13:16:41.836 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245 17-03-02 13:16:41.836 -08 000000045 INF: ===================Camera #2 Frame #245=================== 17-03-02 13:16:41.848 -08 000000094 INF: Y Motor: Unshifted Position: 1633451 17-03-02 13:16:41.898 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:41.912 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF) 17-03-02 13:16:41.912 -08 000000018 INF: Current Position of Pump is: 9600 17-03-02 13:16:41.967 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-03-02 13:16:41.967 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-03-02 13:16:41.967 -08 000000078 INF: ===================Camera #0 Frame #249=================== 17-03-02 13:16:41.976 -08 000000129 INF: RunCopyService queue size at 3/2/2017 1:16:41 PM is 0 17-03-02 13:16:42.010 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251. 17-03-02 13:16:42.010 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251 17-03-02 13:16:42.010 -08 000000045 INF: ===================Camera #2 Frame #251=================== 17-03-02 13:16:42.012 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-03-02 13:16:42.023 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:42.100 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF) 17-03-02 13:16:42.100 -08 000000018 INF: Current Position of Pump is: 9600 17-03-02 13:16:42.100 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC=================== 17-03-02 13:16:42.137 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256. 17-03-02 13:16:42.137 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256 17-03-02 13:16:42.137 -08 000000078 INF: ===================Camera #0 Frame #256=================== 17-03-02 13:16:42.160 -08 000000094 INF: Y Motor: Unshifted Position: 1429344 17-03-02 13:16:42.181 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-03-02 13:16:42.181 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-03-02 13:16:42.181 -08 000000045 INF: ===================Camera #2 Frame #257=================== 17-03-02 13:16:42.200 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD9600R\r 17-03-02 13:16:42.210 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:42.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:42.310 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262. 17-03-02 13:16:42.310 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262 17-03-02 13:16:42.310 -08 000000078 INF: ===================Camera #0 Frame #262=================== 17-03-02 13:16:42.337 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:42.352 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264. 17-03-02 13:16:42.352 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264 17-03-02 13:16:42.352 -08 000000045 INF: ===================Camera #2 Frame #264=================== 17-03-02 13:16:42.386 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:42.472 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:42.475 -08 000000094 INF: Y Motor: Unshifted Position: 1227839 17-03-02 13:16:42.481 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-03-02 13:16:42.481 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-03-02 13:16:42.481 -08 000000078 INF: ===================Camera #0 Frame #268=================== 17-03-02 13:16:42.525 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:42.526 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270. 17-03-02 13:16:42.526 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270 17-03-02 13:16:42.526 -08 000000045 INF: ===================Camera #2 Frame #270=================== 17-03-02 13:16:42.597 -08 000000082 INF: FPGA: Recv TDIYWAIT 17-03-02 13:16:42.598 -08 000000098 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:42.599 -08 000000098 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:16:42.600 -08 000000100 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:16:42.600 -08 000000117 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:16:42.601 -08 000000100 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:16:42.601 -08 000000100 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:16:42.601 -08 000000100 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:16:42.601 -08 000000117 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:16:42.601 -08 000000100 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:16:42.601 -08 000000117 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:16:42.601 -08 000000117 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:16:42.602 -08 000000117 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:16:42.647 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:42.651 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:16:42.651 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:16:42.651 -08 000000078 INF: ===================Camera #0 Frame #272=================== 17-03-02 13:16:42.665 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:16:42.666 -08 000000078 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:42.722 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:42.784 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:42.784 -08 000000094 INF: Y Motor: Unshifted Position: 1023523 17-03-02 13:16:42.831 -08 000000078 INF: Camera #0 ReleaseBuffer 17-03-02 13:16:42.831 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:16:42.831 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:16:42.831 -08 000000045 INF: ===================Camera #2 Frame #272=================== 17-03-02 13:16:42.831 -08 000000078 INF: ===================Camera TDI=================== 17-03-02 13:16:42.834 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:42.838 -08 000000045 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:16:42.839 -08 000000045 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:42.861 -08 000000078 INF: ====================================== 17-03-02 13:16:42.972 -08 000000057 INF: FPGA: Recv EX1MV 17-03-02 13:16:42.972 -08 000000057 INF: FPGA: Recv EX2MV 17-03-02 13:16:42.972 -08 000000117 INF: Excitation Filter 2: Moved 107 steps in 370.9041 ms 17-03-02 13:16:42.972 -08 000000100 INF: Excitation Filter 1: Moved 107 steps in 371.1094 ms 17-03-02 13:16:42.972 -08 000000100 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.2448 ms 17-03-02 13:16:42.972 -08 000000100 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.3258 ms 17-03-02 13:16:42.972 -08 000000117 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.0882 ms 17-03-02 13:16:42.972 -08 000000117 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.4854 ms 17-03-02 13:16:42.972 -08 000000100 INF: ====================================== 17-03-02 13:16:42.972 -08 000000117 INF: ====================================== 17-03-02 13:16:42.973 -08 000000094 INF: Y Motor: Unshifted Position: 992303 17-03-02 13:16:42.973 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:16:42.973 -08 000000094 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:42.974 -08 000000098 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:42.975 -08 000000098 INF: ====================================== 17-03-02 13:16:43.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:43.035 -08 000000094 INF: Y Motor: Recv v 0\r 17-03-02 13:16:43.035 -08 000000094 INF: Y Motor: Moved to 14.9230 after 7864 ms 17-03-02 13:16:43.035 -08 000000094 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:16:43.043 -08 000000045 INF: Camera #2 ReleaseBuffer 17-03-02 13:16:43.043 -08 000000045 INF: ===================Camera TDI=================== 17-03-02 13:16:43.077 -08 000000045 INF: ====================================== 17-03-02 13:16:43.078 -08 000000131 INF: ===================Camera TDI=================== 17-03-02 13:16:43.080 -08 000000131 INF: ====================================== 17-03-02 13:16:43.096 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:43.097 -08 000000094 INF: Y Motor: Recv v 4097\r 17-03-02 13:16:43.097 -08 000000094 INF: Y Motor: Status After move finished OK: 17-03-02 13:16:43.097 -08 000000094 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:43.160 -08 000000094 INF: Y Motor: Recv v 0\r 17-03-02 13:16:43.160 -08 000000094 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:43.160 -08 000000094 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:16:43.221 -08 000000094 INF: Y Motor: Recv v 134217728\r 17-03-02 13:16:43.221 -08 000000094 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-03-02 13:16:43.221 -08 000000094 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:16:43.221 -08 000000094 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:16:43.283 -08 000000094 INF: Y Motor: Recv v 0\r 17-03-02 13:16:43.283 -08 000000094 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:16:43.283 -08 000000094 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:16:43.283 -08 000000094 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:43.346 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:43.349 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:16:43.349 -08 000000094 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:16:43.349 -08 000000094 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:43.407 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:43.408 -08 000000094 INF: Y Motor: Recv ok\r 17-03-02 13:16:43.408 -08 000000094 INF: ====================================== 17-03-02 13:16:43.409 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:43.410 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:43.411 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.411 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-03-02 13:16:43.468 -08 000000086 INF: FPGA: Recv TDICLINES 1023 17-03-02 13:16:43.468 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:16:43.533 -08 000000045 INF: FPGA: Recv TDIYERD 1492304 17-03-02 13:16:43.533 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-03-02 13:16:43.597 -08 000000129 INF: FPGA: Recv ZADCR 35650 17-03-02 13:16:43.597 -08 000000042 INF: At scan end Y pos = 14.923 and Z pos = -0.136. Y moved -48.539 mm 17-03-02 13:16:43.598 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-03-02 13:16:43.657 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:43.657 -08 000000105 INF: FPGA: Recv TDIPULSES 139265 17-03-02 13:16:43.657 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-03-02 13:16:43.657 -08 000000042 INF: TDIScan finished after 11951.9409 ms 17-03-02 13:16:43.657 -08 000000042 INF: Image[0]: Y should trigger at 63.462 mm, 2nd row was at 64.371 mm (error = 0.909 mm) 17-03-02 13:16:43.657 -08 000000042 INF: Image[2]: Y should trigger at 63.462 mm, 2nd row was at 64.371 mm (error = 0.909 mm) 17-03-02 13:16:43.659 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.694 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.703 um 17-03-02 13:16:43.694 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.695 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-03-02 13:16:43.719 -08 000000062 INF: FPGA: Recv SWOOF_RDSTAT 0 17-03-02 13:16:43.719 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:43.720 -08 000000028 INF: ===================Dither Clean Up Command=================== 17-03-02 13:16:43.720 -08 000000078 INF: ===================Set YMotor gains for fast moves=================== 17-03-02 13:16:43.720 -08 000000056 INF: ===================Set Y Motor Motor Velocity=================== 17-03-02 13:16:43.720 -08 000000101 INF: ===================Set Z Motor Motor Velocity=================== 17-03-02 13:16:43.720 -08 000000056 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-03-02 13:16:43.721 -08 000000056 INF: Y Motor: Xmit s r0xcb 25000000\r 17-03-02 13:16:43.721 -08 000000101 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-03-02 13:16:43.721 -08 000000101 INF: FPGA: Xmit ZSTEP 1288471\n 17-03-02 13:16:43.721 -08 000000078 INF: ====================================== 17-03-02 13:16:43.721 -08 000000076 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:16:43.721 -08 000000091 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:43.722 -08 000000076 INF: FPGA: Xmit ZSEL 0\n 17-03-02 13:16:43.724 -08 000000091 INF: ===================LFT:Extracting coords=================== 17-03-02 13:16:43.749 -08 000000091 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:43.750 -08 000000091 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-03-02 13:16:43.751 -08 000000118 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:43.751 -08 000000036 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:43.751 -08 000000045 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:43.751 -08 000000119 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:43.751 -08 000000118 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:43.751 -08 000000036 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:43.752 -08 000000119 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:43.752 -08 000000045 INF: ===================Lookup Focus Tracking=================== 17-03-02 13:16:43.781 -08 000000094 INF: FPGA: Recv ZSTEP 17-03-02 13:16:43.781 -08 000000094 INF: FPGA: Recv ZSEL 17-03-02 13:16:43.781 -08 000000076 INF: FPGA: Xmit ZDACW 41106\n 17-03-02 13:16:43.781 -08 000000101 INF: ====================================== 17-03-02 13:16:43.783 -08 000000056 INF: Y Motor: Recv ok\r 17-03-02 13:16:43.783 -08 000000056 INF: ====================================== 17-03-02 13:16:43.826 -08 000000118 INF: FC:B, C:162,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:43.826 -08 000000036 INF: FC:B, C:162,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:43.826 -08 000000119 INF: FC:B, C:162,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:43.826 -08 000000045 INF: FC:B, C:162,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-03-02 13:16:43.843 -08 000000031 INF: FPGA: Recv ZDACW 17-03-02 13:16:43.844 -08 000000076 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-03-02 13:16:43.844 -08 000000076 INF: FPGA: Xmit TDIBB 0\n 17-03-02 13:16:43.905 -08 000000030 INF: FPGA: Recv TDIBB 17-03-02 13:16:43.905 -08 000000076 INF: ===================DitherPostSwathFocusCleanup=================== 17-03-02 13:16:43.906 -08 000000076 INF: ====================================== 17-03-02 13:16:43.970 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:43.977 -08 000000118 INF: LFT found best fwhm score 2.000007 in 151 ms 17-03-02 13:16:43.977 -08 000000036 INF: LFT found best fwhm score 2.000023 in 151 ms 17-03-02 13:16:43.977 -08 000000118 INF: LFT found good score at index 4589 with fwhm value 2.000007. Next cycle, cycle 163 starting Z position for top surface is at -0.158 mm FC:B, C:162,L:4,T 17-03-02 13:16:43.977 -08 000000036 INF: LFT found good score at index 905 with fwhm value 2.000023. Next cycle, cycle 163 starting Z position for top surface is at -0.159 mm FC:B, C:162,L:4,T 17-03-02 13:16:43.977 -08 000000119 INF: LFT found best fwhm score 2.158141 in 151 ms 17-03-02 13:16:43.977 -08 000000119 INF: LFT found good score at index 2165 with fwhm value 2.158141. Next cycle, cycle 163 starting Z position for top surface is at -0.159 mm FC:B, C:162,L:4,T 17-03-02 13:16:43.977 -08 000000118 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:43.977 -08 000000036 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:43.977 -08 000000119 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:43.977 -08 000000045 INF: LFT found best fwhm score 2.00026 in 151 ms 17-03-02 13:16:43.977 -08 000000118 INF: ====================================== 17-03-02 13:16:43.977 -08 000000045 INF: LFT found good score at index 2061 with fwhm value 2.00026. Next cycle, cycle 163 starting Z position for top surface is at -0.159 mm FC:B, C:162,L:4,T 17-03-02 13:16:43.977 -08 000000119 INF: ====================================== 17-03-02 13:16:43.978 -08 000000045 INF: ===================LookupFocusTracking=================== 17-03-02 13:16:43.978 -08 000000036 INF: ====================================== 17-03-02 13:16:43.978 -08 000000045 INF: ====================================== 17-03-02 13:16:43.979 -08 000000091 INF: ===================LookupFocusTrackingCleanup=================== 17-03-02 13:16:43.980 -08 000000091 INF: LFT weighted average best Z for top surface is at -0.159mm FC:B, C:162,L:4,T 17-03-02 13:16:43.980 -08 000000091 INF: ====================================== 17-03-02 13:16:43.981 -08 000000028 INF: ====================================== 17-03-02 13:16:43.982 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-03-02 13:16:43.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-03-02 13:16:43.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-03-02 13:16:43.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-03-02 13:16:43.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:43.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-03-02 13:16:43.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-03-02 13:16:43.985 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC, Waiting for image analysis=================== 17-03-02 13:16:43.986 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC=================== 17-03-02 13:16:43.986 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Waiting for image analysis=================== 17-03-02 13:16:43.986 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-03-02 13:16:44.009 -08 000000042 INF: Waited 24 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-03-02 13:16:44.009 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4=================== 17-03-02 13:16:44.009 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308=================== 17-03-02 13:16:44.009 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:44.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308=================== 17-03-02 13:16:44.010 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-03-02 13:16:44.010 -08 000000042 INF: Transformed XStagePosition from 78.03464 mm to 78.0111774504185 mm. 17-03-02 13:16:44.022 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5710293551683 mm. 17-03-02 13:16:44.022 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3710293551683 mm. 17-03-02 13:16:44.022 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4617793551683 mm. 17-03-02 13:16:44.024 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:44.024 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-03-02 13:16:44.025 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:44.025 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -156.8 um, section = D_1 17-03-02 13:16:44.026 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:44.027 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:44.028 -08 000000091 INF: ===================MoveEmissionFilters=================== 17-03-02 13:16:44.029 -08 000000083 INF: ===================Move X,Y=================== 17-03-02 13:16:44.030 -08 000000083 INF: ===================Move X,Y, Parallel=================== 17-03-02 13:16:44.031 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:44.032 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-03-02 13:16:44.032 -08 000000078 INF: Z Motor: Entering MoveAbsStepped 17-03-02 13:16:44.032 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:44.034 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-03-02 13:16:44.035 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:16:44.036 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:16:44.039 -08 000000097 INF: ===================Move X Motor without settling=================== 17-03-02 13:16:44.039 -08 000000097 INF: X Motor: Xmit PR VM\n 17-03-02 13:16:44.041 -08 000000108 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:44.042 -08 000000108 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:44.043 -08 000000045 INF: ===================Camera Arm TDI=================== 17-03-02 13:16:44.043 -08 000000108 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:16:44.043 -08 000000119 INF: ===================Move Y Motor without settling=================== 17-03-02 13:16:44.043 -08 000000108 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:44.043 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:16:44.043 -08 000000119 INF: Y Motor: Moving to 64.5710 mm @25.000 mm/sec, started at 14.9230 mm 17-03-02 13:16:44.044 -08 000000108 INF: FPGA: Xmit ZSEL 3\n 17-03-02 13:16:44.044 -08 000000119 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:16:44.044 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:44.044 -08 000000045 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:44.044 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-03-02 13:16:44.044 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-02 13:16:44.044 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-03-02 13:16:44.044 -08 000000131 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-03-02 13:16:44.045 -08 000000131 INF: Emission Filter 12: Remaining IntoPath 17-03-02 13:16:44.045 -08 000000119 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:44.045 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:16:44.045 -08 000000131 INF: ====================================== 17-03-02 13:16:44.045 -08 000000053 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-03-02 13:16:44.045 -08 000000129 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-03-02 13:16:44.046 -08 000000129 INF: ====================================== 17-03-02 13:16:44.046 -08 000000053 INF: ====================================== 17-03-02 13:16:44.047 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-03-02 13:16:44.049 -08 000000098 INF: ====================================== 17-03-02 13:16:44.056 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:16:44.057 -08 000000100 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-03-02 13:16:44.058 -08 000000100 INF: ====================================== 17-03-02 13:16:44.059 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:16:44.060 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1103 Request: {"Cycle":162,"Lane":4,"Tile":1103,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF268","HCSMMF196","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.061 -08 000000076 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-03-02 13:16:44.061 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-03-02 13:16:44.062 -08 000000076 INF: ====================================== 17-03-02 13:16:44.063 -08 000000028 INF: ====================================== 17-03-02 13:16:44.076 -08 000000117 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-03-02 13:16:44.076 -08 000000117 INF: ====================================== 17-03-02 13:16:44.078 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-03-02 13:16:44.079 -08 000000032 INF: ====================================== 17-03-02 13:16:44.107 -08 000000075 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:16:44.108 -08 000000075 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-03-02 13:16:44.115 -08 000000062 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-03-02 13:16:44.116 -08 000000062 INF: ====================================== 17-03-02 13:16:44.118 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-03-02 13:16:44.124 -08 000000118 INF: FPGA: Recv ZSEL 17-03-02 13:16:44.126 -08 000000119 INF: Y Motor: Recv ok\r 17-03-02 13:16:44.126 -08 000000119 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:16:44.126 -08 000000119 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:44.130 -08 000000097 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-03-02 13:16:44.130 -08 000000097 INF: X Motor: Xmit PR VI\n 17-03-02 13:16:44.130 -08 000000108 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:44.130 -08 000000108 INF: FPGA: Xmit TDIBB 1\n 17-03-02 13:16:44.131 -08 000000062 INF: ====================================== 17-03-02 13:16:44.134 -08 000000075 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-03-02 13:16:44.136 -08 000000075 INF: ====================================== 17-03-02 13:16:44.137 -08 000000091 INF: ====================================== 17-03-02 13:16:44.211 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1104 Request: {"Cycle":162,"Lane":4,"Tile":1104,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF234","HCSMMF186","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.214 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1108 Request: {"Cycle":162,"Lane":4,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF199","HCSMMF263","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.217 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1110 Request: {"Cycle":162,"Lane":4,"Tile":1110,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF238","HCSMMF205","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.218 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1109 Request: {"Cycle":162,"Lane":4,"Tile":1109,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF176","HCSMMF217","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.219 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1106 Request: {"Cycle":162,"Lane":4,"Tile":1106,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF193","HCSMMF242","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.220 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1111 Request: {"Cycle":162,"Lane":4,"Tile":1111,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF248","HCSMMF254","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.221 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1115 Request: {"Cycle":162,"Lane":4,"Tile":1115,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF249","HCSMMF198","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.221 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1107 Request: {"Cycle":162,"Lane":4,"Tile":1107,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF182","HCSMMF283","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.222 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1112 Request: {"Cycle":162,"Lane":4,"Tile":1112,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF246","HCSMMF181","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.223 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1105 Request: {"Cycle":162,"Lane":4,"Tile":1105,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF277","HCSMMF270","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.223 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1118 Request: {"Cycle":162,"Lane":4,"Tile":1118,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF287","HCSMMF183","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.224 -08 000000126 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1113 Request: {"Cycle":162,"Lane":4,"Tile":1113,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF220","HCSMMF188","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.225 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1116 Request: {"Cycle":162,"Lane":4,"Tile":1116,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF202","HCSMMF209","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.226 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1101 Request: {"Cycle":162,"Lane":4,"Tile":1101,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF278","HCSMMF255","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.226 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1102 Request: {"Cycle":162,"Lane":4,"Tile":1102,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF284","HCSMMF285","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.227 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1117 Request: {"Cycle":162,"Lane":4,"Tile":1117,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF194","HCSMMF211","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.228 -08 000000122 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1114 Request: {"Cycle":162,"Lane":4,"Tile":1114,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF280","HCSMMF286","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.229 -08 000000129 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1127 Request: {"Cycle":162,"Lane":4,"Tile":1127,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF236","HCSMMF244","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.229 -08 000000131 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1128 Request: {"Cycle":162,"Lane":4,"Tile":1128,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF177","HCSMMF247","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.230 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1121 Request: {"Cycle":162,"Lane":4,"Tile":1121,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF237","HCSMMF219","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.231 -08 000000107 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1125 Request: {"Cycle":162,"Lane":4,"Tile":1125,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF185","HCSMMF226","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.232 -08 000000117 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1122 Request: {"Cycle":162,"Lane":4,"Tile":1122,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF231","HCSMMF225","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.233 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1124 Request: {"Cycle":162,"Lane":4,"Tile":1124,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF187","HCSMMF216","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.233 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1120 Request: {"Cycle":162,"Lane":4,"Tile":1120,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF260","HCSMMF227","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.234 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1119 Request: {"Cycle":162,"Lane":4,"Tile":1119,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF180","HCSMMF257","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.235 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1126 Request: {"Cycle":162,"Lane":4,"Tile":1126,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF279","HCSMMF235","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.237 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 162 Tile: 1123 Request: {"Cycle":162,"Lane":4,"Tile":1123,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF281","HCSMMF252","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 17-03-02 13:16:44.250 -08 000000027 INF: FPGA: Recv TDIBB 17-03-02 13:16:44.250 -08 000000108 INF: ===================Initializing FPGA for ITF Focus=================== 17-03-02 13:16:44.251 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:44.252 -08 000000119 INF: Y Motor: Recv ok\r 17-03-02 13:16:44.252 -08 000000119 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:44.252 -08 000000108 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-03-02 13:16:44.252 -08 000000108 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:44.254 -08 000000097 INF: X Motor: Recv PR VI\r\n410\r\n> 17-03-02 13:16:44.254 -08 000000097 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-03-02 13:16:44.254 -08 000000097 INF: X Motor: Moving to 78.0112 mm @15.000 mm/sec, started at 76.9077 mm 17-03-02 13:16:44.254 -08 000000108 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-03-02 13:16:44.254 -08 000000097 INF: X Motor: Xmit MA 7787\n 17-03-02 13:16:44.254 -08 000000108 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-03-02 13:16:44.254 -08 000000108 INF: FPGA: Xmit ZSTEP 1792263\n 17-03-02 13:16:44.258 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-03-02 13:16:44.312 -08 000000071 INF: FPGA: Recv ZSTEP 17-03-02 13:16:44.312 -08 000000108 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:44.314 -08 000000119 INF: Y Motor: Recv v 0\r 17-03-02 13:16:44.314 -08 000000119 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:44.314 -08 000000097 INF: X Motor: Recv MA 7787\r\n> 17-03-02 13:16:44.314 -08 000000119 INF: Y Motor: Set target position to 5957103 encoder counts 17-03-02 13:16:44.314 -08 000000119 INF: Y Motor: Xmit s r0xca 5957103\r 17-03-02 13:16:44.314 -08 000000108 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-03-02 13:16:44.314 -08 000000097 INF: X Motor: WaitUntilStopped 60074 17-03-02 13:16:44.315 -08 000000108 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:44.316 -08 000000108 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-03-02 13:16:44.316 -08 000000108 INF: Z Motor: Entering ArmAbsStepped 17-03-02 13:16:44.316 -08 000000108 INF: Z Motor: Arming to move to -0.1168 mm 17-03-02 13:16:44.316 -08 000000108 INF: FPGA: Xmit ZYT 6437103 4\n 17-03-02 13:16:44.345 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:44.345 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-03-02 13:16:44.374 -08 000000087 INF: FPGA: Recv ZYT 17-03-02 13:16:44.374 -08 000000108 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492303 enc / 14.923 mm / ) = 6437103 enc / 64.371 mm 17-03-02 13:16:44.374 -08 000000108 INF: FPGA: Xmit ZARM 30621\n 17-03-02 13:16:44.376 -08 000000119 INF: Y Motor: Recv ok\r 17-03-02 13:16:44.376 -08 000000119 INF: Y Motor: Start the move command 17-03-02 13:16:44.376 -08 000000119 INF: Y Motor: Xmit t 1\r 17-03-02 13:16:44.384 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:44.390 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-03-02 13:16:44.436 -08 000000118 INF: FPGA: Recv ZARM 17-03-02 13:16:44.436 -08 000000108 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8606 ms 17-03-02 13:16:44.436 -08 000000108 INF: Z Motor: ArmAbsStepped took 119.5261 ms 17-03-02 13:16:44.436 -08 000000108 INF: ===================TDI Scan Setup, Serial=================== 17-03-02 13:16:44.438 -08 000000108 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:44.439 -08 000000119 INF: Y Motor: Recv ok\r 17-03-02 13:16:44.439 -08 000000119 INF: Y Motor: WaitUntilStopped 61986 17-03-02 13:16:44.439 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:44.439 -08 000000108 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-03-02 13:16:44.440 -08 000000108 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:44.441 -08 000000108 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-03-02 13:16:44.442 -08 000000108 INF: ===================TDI Scan Setup=================== 17-03-02 13:16:44.443 -08 000000108 INF: ====================================== 17-03-02 13:16:44.554 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:44.560 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-03-02 13:16:44.562 -08 000000119 INF: Y Motor: Unshifted Position: 1073418 17-03-02 13:16:44.612 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:44.633 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:16:44.633 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:16:44.633 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:16:44.647 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:44.648 -08 000000045 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:44.650 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-03-02 13:16:44.653 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-03-02 13:16:44.739 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:44.751 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-03-02 13:16:44.874 -08 000000119 INF: Y Motor: Unshifted Position: 1785618 17-03-02 13:16:44.924 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:44.939 -08 000000097 INF: X Motor: Xmit PR ER\n 17-03-02 13:16:45.001 -08 000000097 INF: X Motor: Recv PR ER\r\n0\r\n> 17-03-02 13:16:45.001 -08 000000097 INF: X Motor: Moved to 78.0112 after 687 ms 17-03-02 13:16:45.001 -08 000000097 INF: ====================================== 17-03-02 13:16:45.042 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-03-02 13:16:45.051 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:45.144 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-03-02 13:16:45.186 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:45.187 -08 000000119 INF: Y Motor: Unshifted Position: 2561491 17-03-02 13:16:45.237 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:45.244 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-03-02 13:16:45.244 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-03-02 13:16:45.244 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-03-02 13:16:45.259 -08 000000045 INF: ===================Camera Arm TDI, Serial=================== 17-03-02 13:16:45.261 -08 000000045 INF: ===================Camera Arm TDI=================== 17-03-02 13:16:45.262 -08 000000045 INF: ====================================== 17-03-02 13:16:45.263 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-03-02 13:16:45.264 -08 000000078 INF: ====================================== 17-03-02 13:16:45.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:45.363 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:45.376 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-03-02 13:16:45.498 -08 000000119 INF: Y Motor: Unshifted Position: 3339781 17-03-02 13:16:45.548 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:45.626 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-03-02 13:16:45.675 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:45.688 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-03-02 13:16:45.688 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:45.688 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 17-03-02 13:16:45.811 -08 000000119 INF: Y Motor: Unshifted Position: 4127330 17-03-02 13:16:45.861 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:45.985 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:46.124 -08 000000119 INF: Y Motor: Unshifted Position: 4914795 17-03-02 13:16:46.174 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:46.299 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:46.308 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:46.309 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:46.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:46.310 -08 000000018 INF: WaitCommand(40000) start 17-03-02 13:16:46.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left=================== 17-03-02 13:16:46.435 -08 000000119 INF: Y Motor: Unshifted Position: 5681735 17-03-02 13:16:46.485 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:46.609 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:46.750 -08 000000119 INF: Y Motor: Unshifted Position: 5957105 17-03-02 13:16:46.750 -08 000000119 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-03-02 13:16:46.750 -08 000000119 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:46.810 -08 000000119 INF: Y Motor: Recv v 0\r 17-03-02 13:16:46.810 -08 000000119 INF: Y Motor: Moved to 64.5711 after 2371 ms 17-03-02 13:16:46.810 -08 000000119 INF: Y Motor: Xmit g r0xc9\r 17-03-02 13:16:46.872 -08 000000119 INF: Y Motor: Recv v 4096\r 17-03-02 13:16:46.872 -08 000000119 INF: Y Motor: Status After move finished OK: 17-03-02 13:16:46.872 -08 000000119 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:46.935 -08 000000119 INF: Y Motor: Recv v 0\r 17-03-02 13:16:46.935 -08 000000119 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:46.935 -08 000000119 INF: Y Motor: Xmit g r0xa1\r 17-03-02 13:16:46.998 -08 000000119 INF: Y Motor: Recv v 402653184\r 17-03-02 13:16:46.998 -08 000000119 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-03-02 13:16:46.998 -08 000000119 INF: Y Motor: Get latched fault status: After move finished OK 17-03-02 13:16:46.998 -08 000000119 INF: Y Motor: Xmit g r0xa4\r 17-03-02 13:16:47.059 -08 000000119 INF: Y Motor: Recv v 0\r 17-03-02 13:16:47.059 -08 000000119 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-03-02 13:16:47.059 -08 000000119 INF: Y Motor: After move finished OK: Clear latched fault status 17-03-02 13:16:47.059 -08 000000119 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:47.121 -08 000000119 INF: Y Motor: Recv ok\r 17-03-02 13:16:47.121 -08 000000119 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-03-02 13:16:47.121 -08 000000119 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:47.183 -08 000000119 INF: Y Motor: Recv ok\r 17-03-02 13:16:47.183 -08 000000119 INF: ====================================== 17-03-02 13:16:47.185 -08 000000083 INF: ===================Move X,Y=================== 17-03-02 13:16:47.186 -08 000000083 INF: ====================================== 17-03-02 13:16:47.187 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-03-02 13:16:47.188 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:47.188 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-03-02 13:16:47.188 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-03-02 13:16:47.245 -08 000000042 INF: Y Motor: Recv ok\r 17-03-02 13:16:47.245 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-03-02 13:16:47.308 -08 000000098 INF: FPGA: Recv ZFREQCL 17-03-02 13:16:47.308 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-03-02 13:16:47.309 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:47.309 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-03-02 13:16:47.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:47.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left=================== 17-03-02 13:16:47.370 -08 000000083 INF: FPGA: Recv TDIYERD 6457105 17-03-02 13:16:47.370 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457105 counts (64.571 mm) 17-03-02 13:16:47.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:47.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:47.372 -08 000000115 INF: ===================Set YMotor gains for scans=================== 17-03-02 13:16:47.372 -08 000000086 INF: ===================TDI FPGA Arm=================== 17-03-02 13:16:47.372 -08 000000115 INF: ====================================== 17-03-02 13:16:47.373 -08 000000086 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:47.373 -08 000000086 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-03-02 13:16:47.374 -08 000000086 INF: FPGA: Xmit TDIYPOS 6346178\n 17-03-02 13:16:47.433 -08 000000053 INF: FPGA: Recv TDIYPOS 17-03-02 13:16:47.433 -08 000000086 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:47.435 -08 000000086 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-03-02 13:16:47.435 -08 000000086 INF: FPGA: Xmit TDIYARM3 139264 6437103 1 1\n 17-03-02 13:16:47.494 -08 000000078 INF: FPGA: Recv TDIYARM3 17-03-02 13:16:47.495 -08 000000086 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-03-02 13:16:47.496 -08 000000086 INF: ===================TDI FPGA Arm=================== 17-03-02 13:16:47.497 -08 000000086 INF: ====================================== 17-03-02 13:16:47.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-03-02 13:16:47.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-03-02 13:16:47.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:47.500 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:47.500 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:47.501 -08 000000119 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-03-02 13:16:47.501 -08 000000027 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-03-02 13:16:47.501 -08 000000119 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-03-02 13:16:47.501 -08 000000119 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-03-02 13:16:47.501 -08 000000119 INF: Excitation Filter 2: Moving -107 steps 17-03-02 13:16:47.501 -08 000000027 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-03-02 13:16:47.501 -08 000000119 INF: FPGA: Xmit EX2MV -107\n 17-03-02 13:16:47.501 -08 000000027 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-03-02 13:16:47.501 -08 000000027 INF: Excitation Filter 1: Moving -107 steps 17-03-02 13:16:47.504 -08 000000027 INF: FPGA: Xmit EX1MV -107\n 17-03-02 13:16:47.930 -08 000000088 INF: FPGA: Recv EX2MV 17-03-02 13:16:47.930 -08 000000088 INF: FPGA: Recv EX1MV 17-03-02 13:16:47.930 -08 000000119 INF: Excitation Filter 2: Moved -107 steps in 428.7335 ms 17-03-02 13:16:47.930 -08 000000027 INF: Excitation Filter 1: Moved -107 steps in 428.6259 ms 17-03-02 13:16:47.930 -08 000000027 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 428.9027 ms 17-03-02 13:16:47.930 -08 000000027 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.0236 ms 17-03-02 13:16:47.930 -08 000000119 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 428.9418 ms 17-03-02 13:16:47.930 -08 000000119 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 429.3293 ms 17-03-02 13:16:47.931 -08 000000027 INF: ====================================== 17-03-02 13:16:47.931 -08 000000119 INF: ====================================== 17-03-02 13:16:47.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:47.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #162, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-03-02 13:16:47.934 -08 000000086 INF: ===================Camera TDI=================== 17-03-02 13:16:47.934 -08 000000028 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:47.934 -08 000000083 INF: ===================FPGA Z Wait=================== 17-03-02 13:16:47.934 -08 000000129 INF: ===================Move Y Motor without settling=================== 17-03-02 13:16:47.935 -08 000000129 INF: Y Motor: Moving to 14.9227 mm @6.500 mm/sec, started at 64.5711 mm 17-03-02 13:16:47.935 -08 000000129 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-03-02 13:16:47.935 -08 000000129 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-03-02 13:16:47.935 -08 000000086 INF: ===================Camera TDI, Parallel=================== 17-03-02 13:16:47.935 -08 000000028 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-03-02 13:16:47.935 -08 000000028 INF: FPGA: Xmit TDIYWAIT\n 17-03-02 13:16:47.936 -08 000000107 INF: ===================Camera TDI=================== 17-03-02 13:16:47.936 -08 000000038 INF: ===================Camera TDI=================== 17-03-02 13:16:47.938 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:47.938 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:47.938 -08 000000083 INF: FPGA: Xmit ZWAIT\n 17-03-02 13:16:47.938 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:47.938 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:47.996 -08 000000129 INF: Y Motor: Recv ok\r 17-03-02 13:16:47.996 -08 000000129 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-03-02 13:16:47.996 -08 000000129 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-03-02 13:16:48.079 -08 000000129 INF: Y Motor: Recv ok\r 17-03-02 13:16:48.079 -08 000000129 INF: Y Motor: Xmit g r0xa0\r 17-03-02 13:16:48.088 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:48.088 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:48.088 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:48.088 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:48.136 -08 000000129 INF: Y Motor: Recv v 0\r 17-03-02 13:16:48.136 -08 000000129 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-03-02 13:16:48.136 -08 000000129 INF: Y Motor: Set target position to 992269 encoder counts 17-03-02 13:16:48.136 -08 000000129 INF: Y Motor: Xmit s r0xca 992269\r 17-03-02 13:16:48.198 -08 000000129 INF: Y Motor: Recv ok\r 17-03-02 13:16:48.198 -08 000000129 INF: Y Motor: Start the move command 17-03-02 13:16:48.198 -08 000000129 INF: Y Motor: Xmit t 1\r 17-03-02 13:16:48.238 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:48.238 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:48.238 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-03-02 13:16:48.238 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-03-02 13:16:48.263 -08 000000129 INF: Y Motor: Recv ok\r 17-03-02 13:16:48.263 -08 000000129 INF: Y Motor: WaitUntilStopped 67638 17-03-02 13:16:48.263 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:48.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:48.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left=================== 17-03-02 13:16:48.320 -08 000000088 INF: FPGA: Recv ZWAIT 17-03-02 13:16:48.320 -08 000000083 INF: ====================================== 17-03-02 13:16:48.384 -08 000000129 INF: Y Motor: Unshifted Position: 5895467 17-03-02 13:16:48.388 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:16:48.388 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:16:48.388 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-03-02 13:16:48.388 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-03-02 13:16:48.388 -08 000000107 INF: ===================Camera #0 Frame #4=================== 17-03-02 13:16:48.388 -08 000000038 INF: ===================Camera #2 Frame #4=================== 17-03-02 13:16:48.438 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:48.550 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-03-02 13:16:48.550 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-03-02 13:16:48.550 -08 000000107 INF: ===================Camera #0 Frame #10=================== 17-03-02 13:16:48.551 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-03-02 13:16:48.551 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-03-02 13:16:48.551 -08 000000038 INF: ===================Camera #2 Frame #10=================== 17-03-02 13:16:48.561 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:48.698 -08 000000129 INF: Y Motor: Unshifted Position: 5691803 17-03-02 13:16:48.718 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16. 17-03-02 13:16:48.718 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16 17-03-02 13:16:48.718 -08 000000107 INF: ===================Camera #0 Frame #16=================== 17-03-02 13:16:48.730 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-03-02 13:16:48.730 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-03-02 13:16:48.730 -08 000000038 INF: ===================Camera #2 Frame #17=================== 17-03-02 13:16:48.748 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:48.871 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:48.887 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 21, frameCount = 22. 17-03-02 13:16:48.887 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 22 17-03-02 13:16:48.887 -08 000000107 INF: ===================Camera #0 Frame #22=================== 17-03-02 13:16:48.903 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-03-02 13:16:48.903 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-03-02 13:16:48.903 -08 000000038 INF: ===================Camera #2 Frame #23=================== 17-03-02 13:16:49.008 -08 000000129 INF: Y Motor: Unshifted Position: 5489657 17-03-02 13:16:49.058 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:49.063 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-03-02 13:16:49.063 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-03-02 13:16:49.063 -08 000000107 INF: ===================Camera #0 Frame #29=================== 17-03-02 13:16:49.082 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-03-02 13:16:49.082 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-03-02 13:16:49.082 -08 000000038 INF: ===================Camera #2 Frame #30=================== 17-03-02 13:16:49.185 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:49.237 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-03-02 13:16:49.237 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-03-02 13:16:49.237 -08 000000107 INF: ===================Camera #0 Frame #35=================== 17-03-02 13:16:49.257 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-03-02 13:16:49.257 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-03-02 13:16:49.257 -08 000000038 INF: ===================Camera #2 Frame #36=================== 17-03-02 13:16:49.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:49.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 37 of 40 seconds left=================== 17-03-02 13:16:49.321 -08 000000129 INF: Y Motor: Unshifted Position: 5285986 17-03-02 13:16:49.371 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:49.406 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41. 17-03-02 13:16:49.406 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41 17-03-02 13:16:49.406 -08 000000107 INF: ===================Camera #0 Frame #41=================== 17-03-02 13:16:49.430 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-03-02 13:16:49.430 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-03-02 13:16:49.430 -08 000000038 INF: ===================Camera #2 Frame #42=================== 17-03-02 13:16:49.495 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:49.574 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-03-02 13:16:49.574 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-03-02 13:16:49.574 -08 000000107 INF: ===================Camera #0 Frame #48=================== 17-03-02 13:16:49.599 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-03-02 13:16:49.599 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-03-02 13:16:49.599 -08 000000038 INF: ===================Camera #2 Frame #49=================== 17-03-02 13:16:49.634 -08 000000129 INF: Y Motor: Unshifted Position: 5082533 17-03-02 13:16:49.684 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:49.746 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-03-02 13:16:49.746 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-03-02 13:16:49.746 -08 000000107 INF: ===================Camera #0 Frame #54=================== 17-03-02 13:16:49.771 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-03-02 13:16:49.771 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-03-02 13:16:49.771 -08 000000038 INF: ===================Camera #2 Frame #55=================== 17-03-02 13:16:49.809 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:49.919 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60. 17-03-02 13:16:49.919 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60 17-03-02 13:16:49.919 -08 000000107 INF: ===================Camera #0 Frame #60=================== 17-03-02 13:16:49.940 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-03-02 13:16:49.940 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-03-02 13:16:49.940 -08 000000038 INF: ===================Camera #2 Frame #61=================== 17-03-02 13:16:49.945 -08 000000129 INF: Y Motor: Unshifted Position: 4880811 17-03-02 13:16:49.995 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:50.088 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:16:50.088 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:16:50.088 -08 000000107 INF: ===================Camera #0 Frame #67=================== 17-03-02 13:16:50.111 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-03-02 13:16:50.111 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-03-02 13:16:50.111 -08 000000038 INF: ===================Camera #2 Frame #67=================== 17-03-02 13:16:50.121 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:50.258 -08 000000129 INF: Y Motor: Unshifted Position: 4676713 17-03-02 13:16:50.260 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-03-02 13:16:50.260 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-03-02 13:16:50.260 -08 000000107 INF: ===================Camera #0 Frame #73=================== 17-03-02 13:16:50.280 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-03-02 13:16:50.280 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-03-02 13:16:50.280 -08 000000038 INF: ===================Camera #2 Frame #74=================== 17-03-02 13:16:50.308 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:50.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:50.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 36 of 40 seconds left=================== 17-03-02 13:16:50.429 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-03-02 13:16:50.429 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-03-02 13:16:50.429 -08 000000107 INF: ===================Camera #0 Frame #79=================== 17-03-02 13:16:50.433 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:50.453 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-03-02 13:16:50.453 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-03-02 13:16:50.453 -08 000000038 INF: ===================Camera #2 Frame #80=================== 17-03-02 13:16:50.568 -08 000000129 INF: Y Motor: Unshifted Position: 4474990 17-03-02 13:16:50.597 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85. 17-03-02 13:16:50.597 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85 17-03-02 13:16:50.597 -08 000000107 INF: ===================Camera #0 Frame #85=================== 17-03-02 13:16:50.618 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:50.622 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-03-02 13:16:50.622 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-03-02 13:16:50.622 -08 000000038 INF: ===================Camera #2 Frame #86=================== 17-03-02 13:16:50.745 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:50.765 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91. 17-03-02 13:16:50.765 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91 17-03-02 13:16:50.765 -08 000000107 INF: ===================Camera #0 Frame #91=================== 17-03-02 13:16:50.791 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-03-02 13:16:50.791 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-03-02 13:16:50.791 -08 000000038 INF: ===================Camera #2 Frame #92=================== 17-03-02 13:16:50.881 -08 000000129 INF: Y Motor: Unshifted Position: 4271538 17-03-02 13:16:50.931 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:50.933 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-03-02 13:16:50.933 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-03-02 13:16:50.933 -08 000000107 INF: ===================Camera #0 Frame #98=================== 17-03-02 13:16:50.960 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-03-02 13:16:50.960 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-03-02 13:16:50.960 -08 000000038 INF: ===================Camera #2 Frame #99=================== 17-03-02 13:16:51.057 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:51.104 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104. 17-03-02 13:16:51.104 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104 17-03-02 13:16:51.104 -08 000000107 INF: ===================Camera #0 Frame #104=================== 17-03-02 13:16:51.132 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-03-02 13:16:51.132 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-03-02 13:16:51.132 -08 000000038 INF: ===================Camera #2 Frame #105=================== 17-03-02 13:16:51.193 -08 000000129 INF: Y Motor: Unshifted Position: 4067869 17-03-02 13:16:51.243 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:51.272 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110. 17-03-02 13:16:51.272 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110 17-03-02 13:16:51.272 -08 000000107 INF: ===================Camera #0 Frame #110=================== 17-03-02 13:16:51.301 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-03-02 13:16:51.301 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-03-02 13:16:51.301 -08 000000038 INF: ===================Camera #2 Frame #111=================== 17-03-02 13:16:51.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:51.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 35 of 40 seconds left=================== 17-03-02 13:16:51.367 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:51.441 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116. 17-03-02 13:16:51.441 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116 17-03-02 13:16:51.441 -08 000000107 INF: ===================Camera #0 Frame #116=================== 17-03-02 13:16:51.471 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-03-02 13:16:51.471 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-03-02 13:16:51.471 -08 000000038 INF: ===================Camera #2 Frame #117=================== 17-03-02 13:16:51.507 -08 000000129 INF: Y Motor: Unshifted Position: 3864857 17-03-02 13:16:51.557 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:51.610 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-03-02 13:16:51.610 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-03-02 13:16:51.610 -08 000000107 INF: ===================Camera #0 Frame #123=================== 17-03-02 13:16:51.640 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-03-02 13:16:51.640 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-03-02 13:16:51.640 -08 000000038 INF: ===================Camera #2 Frame #124=================== 17-03-02 13:16:51.681 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:51.781 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129. 17-03-02 13:16:51.781 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129 17-03-02 13:16:51.781 -08 000000107 INF: ===================Camera #0 Frame #129=================== 17-03-02 13:16:51.812 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-03-02 13:16:51.812 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-03-02 13:16:51.812 -08 000000038 INF: ===================Camera #2 Frame #130=================== 17-03-02 13:16:51.817 -08 000000129 INF: Y Motor: Unshifted Position: 3663355 17-03-02 13:16:51.867 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:51.950 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135. 17-03-02 13:16:51.950 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135 17-03-02 13:16:51.950 -08 000000107 INF: ===================Camera #0 Frame #135=================== 17-03-02 13:16:51.981 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-03-02 13:16:51.981 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-03-02 13:16:51.981 -08 000000038 INF: ===================Camera #2 Frame #136=================== 17-03-02 13:16:51.994 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:52.118 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141. 17-03-02 13:16:52.118 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141 17-03-02 13:16:52.118 -08 000000107 INF: ===================Camera #0 Frame #141=================== 17-03-02 13:16:52.131 -08 000000129 INF: Y Motor: Unshifted Position: 3459257 17-03-02 13:16:52.150 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-03-02 13:16:52.150 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-03-02 13:16:52.150 -08 000000038 INF: ===================Camera #2 Frame #142=================== 17-03-02 13:16:52.181 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:52.286 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147. 17-03-02 13:16:52.286 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147 17-03-02 13:16:52.286 -08 000000107 INF: ===================Camera #0 Frame #147=================== 17-03-02 13:16:52.305 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:52.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:52.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left=================== 17-03-02 13:16:52.320 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-03-02 13:16:52.320 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-03-02 13:16:52.320 -08 000000038 INF: ===================Camera #2 Frame #149=================== 17-03-02 13:16:52.441 -08 000000129 INF: Y Motor: Unshifted Position: 3257543 17-03-02 13:16:52.454 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154. 17-03-02 13:16:52.454 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154 17-03-02 13:16:52.454 -08 000000107 INF: ===================Camera #0 Frame #154=================== 17-03-02 13:16:52.491 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:52.494 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-03-02 13:16:52.494 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-03-02 13:16:52.494 -08 000000038 INF: ===================Camera #2 Frame #155=================== 17-03-02 13:16:52.618 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:52.625 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160. 17-03-02 13:16:52.625 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160 17-03-02 13:16:52.625 -08 000000107 INF: ===================Camera #0 Frame #160=================== 17-03-02 13:16:52.666 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-03-02 13:16:52.666 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-03-02 13:16:52.666 -08 000000038 INF: ===================Camera #2 Frame #161=================== 17-03-02 13:16:52.754 -08 000000129 INF: Y Motor: Unshifted Position: 3053873 17-03-02 13:16:52.793 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166. 17-03-02 13:16:52.793 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166 17-03-02 13:16:52.793 -08 000000107 INF: ===================Camera #0 Frame #166=================== 17-03-02 13:16:52.804 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:52.836 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-03-02 13:16:52.836 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-03-02 13:16:52.836 -08 000000038 INF: ===================Camera #2 Frame #168=================== 17-03-02 13:16:52.928 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:52.963 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172. 17-03-02 13:16:52.963 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172 17-03-02 13:16:52.963 -08 000000107 INF: ===================Camera #0 Frame #172=================== 17-03-02 13:16:53.010 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-03-02 13:16:53.010 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-03-02 13:16:53.010 -08 000000038 INF: ===================Camera #2 Frame #174=================== 17-03-02 13:16:53.069 -08 000000129 INF: Y Motor: Unshifted Position: 2850432 17-03-02 13:16:53.290 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:53.290 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184. 17-03-02 13:16:53.290 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184 17-03-02 13:16:53.290 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184. 17-03-02 13:16:53.290 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184 17-03-02 13:16:53.291 -08 000000038 INF: ===================Camera #2 Frame #184=================== 17-03-02 13:16:53.291 -08 000000107 INF: ===================Camera #0 Frame #184=================== 17-03-02 13:16:53.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:53.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 33 of 40 seconds left=================== 17-03-02 13:16:53.398 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:53.473 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191. 17-03-02 13:16:53.473 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191 17-03-02 13:16:53.473 -08 000000038 INF: ===================Camera #2 Frame #191=================== 17-03-02 13:16:53.478 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191. 17-03-02 13:16:53.478 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191 17-03-02 13:16:53.478 -08 000000107 INF: ===================Camera #0 Frame #191=================== 17-03-02 13:16:53.534 -08 000000129 INF: Y Motor: Unshifted Position: 2546656 17-03-02 13:16:53.584 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:53.647 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198. 17-03-02 13:16:53.647 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198 17-03-02 13:16:53.647 -08 000000038 INF: ===================Camera #2 Frame #198=================== 17-03-02 13:16:53.651 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198. 17-03-02 13:16:53.651 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198 17-03-02 13:16:53.651 -08 000000107 INF: ===================Camera #0 Frame #198=================== 17-03-02 13:16:53.708 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:53.821 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204. 17-03-02 13:16:53.821 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204 17-03-02 13:16:53.821 -08 000000038 INF: ===================Camera #2 Frame #204=================== 17-03-02 13:16:53.824 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204. 17-03-02 13:16:53.824 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204 17-03-02 13:16:53.824 -08 000000107 INF: ===================Camera #0 Frame #204=================== 17-03-02 13:16:53.847 -08 000000129 INF: Y Motor: Unshifted Position: 2342984 17-03-02 13:16:53.897 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:53.991 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210. 17-03-02 13:16:53.991 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210 17-03-02 13:16:53.991 -08 000000038 INF: ===================Camera #2 Frame #210=================== 17-03-02 13:16:53.993 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210. 17-03-02 13:16:53.993 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210 17-03-02 13:16:53.993 -08 000000107 INF: ===================Camera #0 Frame #210=================== 17-03-02 13:16:54.022 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:54.159 -08 000000129 INF: Y Motor: Unshifted Position: 2140184 17-03-02 13:16:54.162 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217. 17-03-02 13:16:54.162 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217 17-03-02 13:16:54.162 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217. 17-03-02 13:16:54.162 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217 17-03-02 13:16:54.162 -08 000000038 INF: ===================Camera #2 Frame #217=================== 17-03-02 13:16:54.162 -08 000000107 INF: ===================Camera #0 Frame #217=================== 17-03-02 13:16:54.209 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:54.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:54.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 32 of 40 seconds left=================== 17-03-02 13:16:54.333 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:54.335 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223. 17-03-02 13:16:54.335 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223 17-03-02 13:16:54.335 -08 000000107 INF: ===================Camera #0 Frame #223=================== 17-03-02 13:16:54.336 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223. 17-03-02 13:16:54.336 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223 17-03-02 13:16:54.336 -08 000000038 INF: ===================Camera #2 Frame #223=================== 17-03-02 13:16:54.469 -08 000000129 INF: Y Motor: Unshifted Position: 1937818 17-03-02 13:16:54.505 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229. 17-03-02 13:16:54.505 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229 17-03-02 13:16:54.505 -08 000000107 INF: ===================Camera #0 Frame #229=================== 17-03-02 13:16:54.506 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229. 17-03-02 13:16:54.506 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229 17-03-02 13:16:54.506 -08 000000038 INF: ===================Camera #2 Frame #229=================== 17-03-02 13:16:54.519 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:54.646 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:54.675 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235. 17-03-02 13:16:54.675 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235 17-03-02 13:16:54.675 -08 000000107 INF: ===================Camera #0 Frame #235=================== 17-03-02 13:16:54.676 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235. 17-03-02 13:16:54.676 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235 17-03-02 13:16:54.676 -08 000000038 INF: ===================Camera #2 Frame #235=================== 17-03-02 13:16:54.782 -08 000000129 INF: Y Motor: Unshifted Position: 1735029 17-03-02 13:16:54.832 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:54.845 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242. 17-03-02 13:16:54.845 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242 17-03-02 13:16:54.845 -08 000000107 INF: ===================Camera #0 Frame #242=================== 17-03-02 13:16:54.846 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242. 17-03-02 13:16:54.846 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242 17-03-02 13:16:54.846 -08 000000038 INF: ===================Camera #2 Frame #242=================== 17-03-02 13:16:54.956 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:55.018 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248. 17-03-02 13:16:55.018 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248 17-03-02 13:16:55.018 -08 000000107 INF: ===================Camera #0 Frame #248=================== 17-03-02 13:16:55.020 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248. 17-03-02 13:16:55.020 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248 17-03-02 13:16:55.020 -08 000000038 INF: ===================Camera #2 Frame #248=================== 17-03-02 13:16:55.096 -08 000000129 INF: Y Motor: Unshifted Position: 1533311 17-03-02 13:16:55.146 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:55.188 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254. 17-03-02 13:16:55.188 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254 17-03-02 13:16:55.188 -08 000000107 INF: ===================Camera #0 Frame #254=================== 17-03-02 13:16:55.190 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254. 17-03-02 13:16:55.190 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254 17-03-02 13:16:55.190 -08 000000038 INF: ===================Camera #2 Frame #254=================== 17-03-02 13:16:55.270 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:55.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation=================== 17-03-02 13:16:55.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #163, Chemistry CompleteCycle, Incorporation, Delay 31 of 40 seconds left=================== 17-03-02 13:16:55.358 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261. 17-03-02 13:16:55.358 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261 17-03-02 13:16:55.358 -08 000000107 INF: ===================Camera #0 Frame #261=================== 17-03-02 13:16:55.360 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261. 17-03-02 13:16:55.360 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261 17-03-02 13:16:55.360 -08 000000038 INF: ===================Camera #2 Frame #261=================== 17-03-02 13:16:55.406 -08 000000129 INF: Y Motor: Unshifted Position: 1329211 17-03-02 13:16:55.456 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:55.531 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267. 17-03-02 13:16:55.531 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267 17-03-02 13:16:55.531 -08 000000107 INF: ===================Camera #0 Frame #267=================== 17-03-02 13:16:55.534 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267. 17-03-02 13:16:55.534 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267 17-03-02 13:16:55.534 -08 000000038 INF: ===================Camera #2 Frame #267=================== 17-03-02 13:16:55.580 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:55.701 -08 000000107 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:16:55.701 -08 000000107 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:16:55.701 -08 000000107 INF: ===================Camera #0 Frame #272=================== 17-03-02 13:16:55.704 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-03-02 13:16:55.704 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-03-02 13:16:55.704 -08 000000038 INF: ===================Camera #2 Frame #272=================== 17-03-02 13:16:55.717 -08 000000107 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:16:55.718 -08 000000088 INF: FPGA: Recv TDIYWAIT 17-03-02 13:16:55.718 -08 000000028 INF: ===================Wait for frames then close excitation filters=================== 17-03-02 13:16:55.719 -08 000000107 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:55.720 -08 000000129 INF: Y Motor: Unshifted Position: 1127504 17-03-02 13:16:55.720 -08 000000028 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-03-02 13:16:55.720 -08 000000038 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-03-02 13:16:55.721 -08 000000074 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-03-02 13:16:55.721 -08 000000057 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-03-02 13:16:55.721 -08 000000057 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-03-02 13:16:55.721 -08 000000057 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-03-02 13:16:55.721 -08 000000057 INF: Excitation Filter 2: Moving 107 steps 17-03-02 13:16:55.721 -08 000000057 INF: FPGA: Xmit EX2MV 107\n 17-03-02 13:16:55.721 -08 000000038 INF: ===================CameraTDI Cleanup=================== 17-03-02 13:16:55.722 -08 000000074 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-03-02 13:16:55.722 -08 000000074 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-03-02 13:16:55.722 -08 000000074 INF: Excitation Filter 1: Moving 107 steps 17-03-02 13:16:55.723 -08 000000074 INF: FPGA: Xmit EX1MV 107\n 17-03-02 13:16:55.770 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:55.894 -08 000000129 INF: Y Motor: Get amplifier status: UpdateMoving 17-03-02 13:16:55.897 -08 000000038 INF: Camera #2 ReleaseBuffer 17-03-02 13:16:55.897 -08 000000038 INF: ===================Camera TDI=================== 17-03-02 13:16:55.931